organic compounds
4,4′-{[1,2-Phenylenebis(methylene)]bis(oxy)}dibenzoic acid dimethylformamide disolvate
aFaculty of Chemistry and Chemical Engineering, Yunnan Normal University, Kunming 650050, People's Republic of China
*Correspondence e-mail: zaxchem@126.com
In the title solvate, C22H18O6·2C3H7NO, the complete dicarboxylic acid molecule is generated by a crystallographic twofold axis, which bisects the central benzene ring and one N,N-dimethylformamide solvent molecule. The dihedral angle between the central and pendant benzene rings is 54.53 (5)° while that between the pendant rings is 45.44 (5)°. In the crystal, the acid molecules are linked to the solvent molecules via O—H⋯O and weak C—H⋯O hydrogen bonds. Further weak C—H⋯O interactions link adjacent acid molecules into a three-dimensional network.
CCDC reference: 994050
Related literature
For multicarboxylic acid ligands and derivatives used in the synthesis of porous metal-organic frameworks, see: Eddaoudi et al. (2002); Eubank et al. (2011); Zhang et al. (2012). For structures constructed by the acid molecule of the title compound, see: Cao et al. (2009a); Hu et al. (2013). For [Zn(1,2-BAB)(4,4′-bipy)1/2]n (H2BAB =4,4′-{[1,2-phenylenebis(methylene)]bis(oxy)}dibenzoic acid), see Cao et al. (2009a) and for [Cd(1,2-BAB)2(phen)2]n, see: Cao et al. (2009b). For the synthesis of the title compound, see: Cao et al. (2009a); Rajakumar et al. (2009).
Experimental
Crystal data
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Data collection: RAPID-AUTO (Rigaku, 1998); cell RAPID-AUTO; data reduction: CrystalClear (Rigaku/MSC, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg, 1999); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).
Supporting information
CCDC reference: 994050
10.1107/S1600536814006795/bg2524sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536814006795/bg2524Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536814006795/bg2524Isup3.cdx
Supporting information file. DOI: 10.1107/S1600536814006795/bg2524Isup4.cml
The ligand 4,4'-(1,2-phenylenebis(methylene))bis(oxy)dibenzoic acid was synthesized according to the literature method (Cao et al. 2009a; Rajakumar et al. 2009). A mixture of 4,4'-(1,2-phenylenebis(methylene))bis(oxy)dibenzoic acid (37.8 mg, 0.1 mmol) and DMF (4 ml) was placed in a Teflon-lined stainless steel vessel (15 ml) and heated at 368 k for 48 h and then cooled to room temperature at a rate of 5 K h-1. The resulting colorless solution slowly evaporated in air for over two weeks and colorless block crystals of the title compound suitable for X-ray diffraction were obtained.
The positions of the hydroxyl hydrogen H1A could be obtained from the difference electron-density map, and the other H atoms were placed in idealized positions (O—H = 0.82 Å and C—H = 0.93–0.97 Å) and refined as riding atoms with Uiso(H) = 1.2Ueq(C, N) and Uiso(H) = 1.5Ueq(O, Cmethyl).
Data collection: RAPID-AUTO (Rigaku, 1998); cell
RAPID-AUTO (Rigaku, 1998); data reduction: CrystalClear (Rigaku/MSC, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg, 1999); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. ORTEP view of the title compound drawn with 30% probability displacement ellipsoids for the non-H atoms. The intermolecular interactions between the acid and solvent molecules are shown as dashed lines. Symmetry code (A): 1-x, y, -z+1/2. | |
Fig. 2. Packing of the acid molecules in the title compound viewed along the b-axis showing the hydrogen bonding interactions with dashed lines. H atoms not involved in H-bonding have been omitted for clarity. |
C22H18O6·2C3H7NO | Z = 4 |
Mr = 524.56 | F(000) = 1112 |
Monoclinic, C2/c | Dx = 1.283 Mg m−3 |
Hall symbol: -C 2yc | Mo Kα radiation, λ = 0.71073 Å |
a = 12.568 (3) Å | µ = 0.09 mm−1 |
b = 11.081 (2) Å | T = 293 K |
c = 19.688 (4) Å | Block, colorless |
β = 98.04 (3)° | 0.37 × 0.26 × 0.21 mm |
V = 2715.0 (9) Å3 |
Rigaku R-AXIS RAPID IP diffractometer | 3112 independent reflections |
Radiation source: fine-focus sealed tube | 2522 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.023 |
ω scans | θmax = 27.5°, θmin = 3.1° |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | h = −16→16 |
Tmin = 0.783, Tmax = 1.000 | k = −14→14 |
12992 measured reflections | l = −25→24 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.042 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.132 | w = 1/[σ2(Fo2) + (0.0749P)2 + 0.5159P] where P = (Fo2 + 2Fc2)/3 |
S = 1.08 | (Δ/σ)max = 0.004 |
3112 reflections | Δρmax = 0.20 e Å−3 |
179 parameters | Δρmin = −0.18 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0067 (9) |
C22H18O6·2C3H7NO | V = 2715.0 (9) Å3 |
Mr = 524.56 | Z = 4 |
Monoclinic, C2/c | Mo Kα radiation |
a = 12.568 (3) Å | µ = 0.09 mm−1 |
b = 11.081 (2) Å | T = 293 K |
c = 19.688 (4) Å | 0.37 × 0.26 × 0.21 mm |
β = 98.04 (3)° |
Rigaku R-AXIS RAPID IP diffractometer | 3112 independent reflections |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | 2522 reflections with I > 2σ(I) |
Tmin = 0.783, Tmax = 1.000 | Rint = 0.023 |
12992 measured reflections |
R[F2 > 2σ(F2)] = 0.042 | 0 restraints |
wR(F2) = 0.132 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.08 | Δρmax = 0.20 e Å−3 |
3112 reflections | Δρmin = −0.18 e Å−3 |
179 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.40156 (8) | 0.62429 (9) | 0.44602 (5) | 0.0603 (3) | |
H1A | 0.3863 (16) | 0.701 (2) | 0.4567 (11) | 0.097 (6)* | |
O2 | 0.25800 (8) | 0.64860 (9) | 0.36718 (5) | 0.0634 (3) | |
O3 | 0.40553 (7) | 0.12257 (8) | 0.29461 (5) | 0.0542 (3) | |
O4 | 0.37129 (9) | 0.84725 (9) | 0.48090 (5) | 0.0697 (3) | |
N1 | 0.27647 (9) | 1.01724 (11) | 0.45297 (6) | 0.0612 (3) | |
C1 | 0.33217 (9) | 0.58739 (11) | 0.39294 (6) | 0.0454 (3) | |
C2 | 0.35606 (9) | 0.46508 (10) | 0.36834 (6) | 0.0426 (3) | |
C3 | 0.43792 (10) | 0.39435 (11) | 0.40211 (6) | 0.0466 (3) | |
H3A | 0.4797 | 0.4243 | 0.4412 | 0.056* | |
C4 | 0.45868 (10) | 0.27970 (11) | 0.37878 (6) | 0.0477 (3) | |
H4A | 0.5140 | 0.2333 | 0.4017 | 0.057* | |
C5 | 0.39532 (9) | 0.23540 (10) | 0.32053 (6) | 0.0442 (3) | |
C6 | 0.31335 (10) | 0.30568 (12) | 0.28570 (7) | 0.0523 (3) | |
H6A | 0.2716 | 0.2758 | 0.2466 | 0.063* | |
C7 | 0.29425 (10) | 0.41968 (12) | 0.30942 (6) | 0.0497 (3) | |
H7A | 0.2398 | 0.4667 | 0.2860 | 0.060* | |
C8 | 0.49311 (10) | 0.04951 (11) | 0.32584 (6) | 0.0477 (3) | |
H8A | 0.4838 | 0.0308 | 0.3728 | 0.057* | |
H8B | 0.5604 | 0.0927 | 0.3264 | 0.057* | |
C9 | 0.49515 (9) | −0.06479 (10) | 0.28507 (6) | 0.0431 (3) | |
C10 | 0.49017 (10) | −0.17419 (11) | 0.31849 (7) | 0.0522 (3) | |
H10A | 0.4834 | −0.1747 | 0.3649 | 0.063* | |
C11 | 0.49509 (11) | −0.28268 (11) | 0.28426 (7) | 0.0574 (3) | |
H11A | 0.4917 | −0.3552 | 0.3076 | 0.069* | |
C12 | 0.33915 (15) | 1.08831 (15) | 0.50625 (9) | 0.0759 (5) | |
H12A | 0.4015 | 1.0434 | 0.5255 | 0.114* | |
H12B | 0.2962 | 1.1064 | 0.5416 | 0.114* | |
H12C | 0.3613 | 1.1622 | 0.4869 | 0.114* | |
C13 | 0.18927 (15) | 1.07654 (18) | 0.40971 (12) | 0.0903 (6) | |
H13A | 0.1600 | 1.0227 | 0.3737 | 0.135* | |
H13B | 0.2158 | 1.1479 | 0.3901 | 0.135* | |
H13C | 0.1342 | 1.0983 | 0.4367 | 0.135* | |
C14 | 0.29748 (12) | 0.90176 (14) | 0.44604 (8) | 0.0617 (4) | |
H14A | 0.2537 | 0.8585 | 0.4126 | 0.074* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0695 (6) | 0.0499 (5) | 0.0549 (5) | 0.0117 (4) | −0.0139 (4) | −0.0105 (4) |
O2 | 0.0590 (6) | 0.0563 (5) | 0.0690 (6) | 0.0145 (4) | −0.0118 (5) | −0.0082 (4) |
O3 | 0.0496 (5) | 0.0479 (5) | 0.0597 (5) | 0.0077 (4) | −0.0111 (4) | −0.0126 (4) |
O4 | 0.0791 (7) | 0.0580 (6) | 0.0679 (6) | 0.0169 (5) | −0.0038 (5) | −0.0100 (5) |
N1 | 0.0563 (7) | 0.0543 (6) | 0.0735 (7) | 0.0069 (5) | 0.0113 (6) | 0.0046 (5) |
C1 | 0.0462 (6) | 0.0455 (6) | 0.0433 (6) | 0.0008 (5) | 0.0020 (5) | 0.0015 (5) |
C2 | 0.0419 (6) | 0.0432 (5) | 0.0417 (5) | −0.0010 (4) | 0.0029 (4) | 0.0006 (4) |
C3 | 0.0496 (6) | 0.0462 (6) | 0.0405 (5) | −0.0010 (5) | −0.0055 (5) | −0.0021 (5) |
C4 | 0.0472 (6) | 0.0463 (6) | 0.0457 (6) | 0.0047 (5) | −0.0069 (5) | 0.0002 (5) |
C5 | 0.0422 (6) | 0.0433 (6) | 0.0456 (6) | −0.0002 (4) | 0.0012 (5) | −0.0034 (5) |
C6 | 0.0469 (6) | 0.0544 (7) | 0.0505 (6) | 0.0023 (5) | −0.0108 (5) | −0.0082 (5) |
C7 | 0.0440 (6) | 0.0508 (6) | 0.0504 (6) | 0.0060 (5) | −0.0077 (5) | −0.0013 (5) |
C8 | 0.0475 (6) | 0.0476 (6) | 0.0457 (6) | 0.0048 (5) | −0.0016 (5) | −0.0023 (5) |
C9 | 0.0368 (5) | 0.0436 (6) | 0.0477 (6) | 0.0012 (4) | 0.0015 (4) | −0.0005 (4) |
C10 | 0.0530 (7) | 0.0503 (6) | 0.0535 (6) | 0.0002 (5) | 0.0078 (5) | 0.0066 (5) |
C11 | 0.0549 (7) | 0.0422 (6) | 0.0753 (8) | −0.0006 (5) | 0.0102 (6) | 0.0089 (6) |
C12 | 0.0867 (11) | 0.0567 (8) | 0.0852 (11) | −0.0003 (8) | 0.0155 (9) | −0.0087 (8) |
C13 | 0.0650 (10) | 0.0815 (11) | 0.1215 (16) | 0.0154 (9) | 0.0034 (10) | 0.0215 (11) |
C14 | 0.0602 (8) | 0.0604 (8) | 0.0635 (8) | 0.0056 (6) | 0.0056 (6) | −0.0060 (6) |
O1—C1 | 1.3285 (15) | C6—H6A | 0.9300 |
O1—H1A | 0.90 (2) | C7—H7A | 0.9300 |
O2—C1 | 1.2059 (14) | C8—C9 | 1.5016 (16) |
O3—C5 | 1.3633 (14) | C8—H8A | 0.9700 |
O3—C8 | 1.4338 (14) | C8—H8B | 0.9700 |
O4—C14 | 1.2323 (17) | C9—C10 | 1.3848 (16) |
N1—C14 | 1.3175 (19) | C9—C9i | 1.403 (2) |
N1—C13 | 1.448 (2) | C10—C11 | 1.3837 (18) |
N1—C12 | 1.453 (2) | C10—H10A | 0.9300 |
C1—C2 | 1.4841 (16) | C11—C11i | 1.372 (3) |
C2—C3 | 1.3868 (16) | C11—H11A | 0.9300 |
C2—C7 | 1.3966 (16) | C12—H12A | 0.9600 |
C3—C4 | 1.3879 (17) | C12—H12B | 0.9600 |
C3—H3A | 0.9300 | C12—H12C | 0.9600 |
C4—C5 | 1.3911 (16) | C13—H13A | 0.9600 |
C4—H4A | 0.9300 | C13—H13B | 0.9600 |
C5—C6 | 1.3929 (16) | C13—H13C | 0.9600 |
C6—C7 | 1.3794 (18) | C14—H14A | 0.9300 |
C1—O1—H1A | 109.6 (13) | C9—C8—H8A | 110.0 |
C5—O3—C8 | 117.65 (9) | O3—C8—H8B | 110.0 |
C14—N1—C13 | 121.73 (14) | C9—C8—H8B | 110.0 |
C14—N1—C12 | 120.34 (13) | H8A—C8—H8B | 108.4 |
C13—N1—C12 | 117.91 (14) | C10—C9—C9i | 118.91 (7) |
O2—C1—O1 | 122.79 (11) | C10—C9—C8 | 118.63 (11) |
O2—C1—C2 | 123.80 (11) | C9i—C9—C8 | 122.44 (7) |
O1—C1—C2 | 113.41 (10) | C11—C10—C9 | 121.41 (12) |
C3—C2—C7 | 118.94 (11) | C11—C10—H10A | 119.3 |
C3—C2—C1 | 122.01 (10) | C9—C10—H10A | 119.3 |
C7—C2—C1 | 119.05 (10) | C11i—C11—C10 | 119.68 (8) |
C4—C3—C2 | 121.32 (10) | C11i—C11—H11A | 120.2 |
C4—C3—H3A | 119.3 | C10—C11—H11A | 120.2 |
C2—C3—H3A | 119.3 | N1—C12—H12A | 109.5 |
C3—C4—C5 | 118.90 (10) | N1—C12—H12B | 109.5 |
C3—C4—H4A | 120.5 | H12A—C12—H12B | 109.5 |
C5—C4—H4A | 120.5 | N1—C12—H12C | 109.5 |
O3—C5—C4 | 124.01 (10) | H12A—C12—H12C | 109.5 |
O3—C5—C6 | 115.48 (10) | H12B—C12—H12C | 109.5 |
C4—C5—C6 | 120.49 (11) | N1—C13—H13A | 109.5 |
C7—C6—C5 | 119.81 (10) | N1—C13—H13B | 109.5 |
C7—C6—H6A | 120.1 | H13A—C13—H13B | 109.5 |
C5—C6—H6A | 120.1 | N1—C13—H13C | 109.5 |
C6—C7—C2 | 120.54 (10) | H13A—C13—H13C | 109.5 |
C6—C7—H7A | 119.7 | H13B—C13—H13C | 109.5 |
C2—C7—H7A | 119.7 | O4—C14—N1 | 124.37 (14) |
O3—C8—C9 | 108.45 (9) | O4—C14—H14A | 117.8 |
O3—C8—H8A | 110.0 | N1—C14—H14A | 117.8 |
Symmetry code: (i) −x+1, y, −z+1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1A···O4 | 0.90 (2) | 1.71 (2) | 2.6064 (14) | 174 (2) |
C3—H3A···O1ii | 0.93 | 2.55 | 3.3714 (17) | 147 |
C8—H8B···O2iii | 0.97 | 2.58 | 3.4920 (18) | 157 |
C14—H14A···O2 | 0.93 | 2.50 | 3.2110 (19) | 134 |
Symmetry codes: (ii) −x+1, −y+1, −z+1; (iii) x+1/2, y−1/2, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1A···O4 | 0.90 (2) | 1.71 (2) | 2.6064 (14) | 174 (2) |
C3—H3A···O1i | 0.93 | 2.55 | 3.3714 (17) | 146.9 |
C8—H8B···O2ii | 0.97 | 2.58 | 3.4920 (18) | 157.3 |
C14—H14A···O2 | 0.93 | 2.50 | 3.2110 (19) | 133.9 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x+1/2, y−1/2, z. |
Acknowledgements
The authors thank the Science and Technology Department (2010ZC070, 2011FZ080 and 2012FB141) of Yunnan Province for supporting this work.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
In the past few years, multicarboxylic acids and their derivatives have attracted increasing attention as an important class of ligands used for the synthesis of porous metal organic framework compounds (Eddaoudi et al. 2002; Eubank et al. 2011; Zhang et al. 2012). The acid molecule in the title compound, as a conformationally flexible V-shaped long bicarboxylate ligand, has been already used to synthesize entangled frameworks having both polyrotaxane and polycatenane characteristics that also achieve different topological structures in the entangled system (Cao et al. 2009a; Hu et al. 2013). Although there are crystal structure reports in the literature regarding the title multicarboxylic acid, no crystallographic study has been already performed on the ligand itself.
The crystal structure of the title compound is composed of 4,4'-(1,2-phenylenebis(methylene))bis(oxy)dibenzoic (dicarboxylic) acid and N,N-dimethylformamide and has monoclinic symmetry (space group: C2/c). The acid molecule adopts an E configuration, and contains a crystallographic C2 axis passing through the central benzene group (Fig. 1). The dihedral angles between the benzene rings are 45.44 (5)° and 54.53 (5)°, values which are significantly smaller than those in metal organic frameworks containing the acid molecules with an E configuration (where the acid molecule loses both protons from the carboxylic groups); for example, [Zn(1,2-BAB)(4,4'-bipy)1/2]n (4,4'-bipy = 4,4'-Bipyridine) and [Cd(1,2-BAB)2(phen)2]n (phen = 1,10-phenanthroline) the dihedral angles range from 58.2 (1)° to 70.9 (1)° and from 65.6 (1)° to 84.7 (1)°, respectively (Cao et al. 2009a,b).
In the crystal, the acid molecule are linked to the solvent molecules by a strong O—HO and a weak C—HO hydrogen bond [Table 1 (entries 1 and 4) and Fig. 1]. Besides, weak intermolecular C—H···O interactions link the adjacent acid molecules into a three-dimensional network [Table 1 (entries 2 and 3) and Fig 2].