organic compounds
1-(2,3,4,5,6-Pentamethylbenzyl)-2-(pyridin-2-yl)-1H-benzimidazole
aDepartment of Physics, Institute of Sciences, Dicle University, 21280, Diyarbakır, Turkey, bDepartment of Physics, Faculty of Education, Dicle University, 21280, Diyarbakır, Turkey, cScience and Technology Application and Research Center, Dicle University, 21280, Diyarbakır, Turkey, and dDepartment of Chemistry, Faculty of Science & Art, Harran University, 63300, Şanlıurfa, Turkey
*Correspondence e-mail: omer.celik@dicle.edu.tr
In the title compound, C24H25N3, the benzimidazole ring system is essentially planar, with an r.m.s. deviation of 0.017 Å, and forms dihedral angles of 7.81 (5) and 87.61 (4)° with the pyridine and benzene rings, respectively. An intramolecular C—H⋯N hydrogen bond is observed. In the crystal, molecules are stacked along the a axis by weak C—H⋯π interactions.
CCDC reference: 996309
Related literature
For the use of 2-(2-pyridyl)benzimidazole in coordination chemistry, see: Sahin et al. (2010); Harkins et al. (1956); Chiswell et al. (1964); De Castro et al. (1991); Maekawa et al. (1994); Khalil et al. (2001); Boca et al. (1997). For the use of N—N-type ligand systems involving 2,2′-bipyridine, see: Lippert (1999); Wong & Giandomenico (1999), Kelland & Farrell (2000). For related structures, see: Çelik et al. (2007, 2009, 2014).
Experimental
Crystal data
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Data collection: APEX2 (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: WinGX (Farrugia, 2012).
Supporting information
CCDC reference: 996309
10.1107/S1600536814007934/rz5115sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536814007934/rz5115Isup2.hkl
Supporting information file. DOI: 10.1107/S1600536814007934/rz5115Isup3.cml
NaH (60%) (398 mg, 11.0 mmol) was washed two times with dry hexane, filtered off via cannula and a solution of the 2-pyridiylbenzimidazole (1.95 g, 10.0 mmol) in dry toluene (10 ml) was added, then the solution was heated at 90°C for 24 h. Evolution of hydrogen was observed at this temperature. 2,3,4,5,6-Pentamethylbenzyl bromide (2.45 g, 10.0 mmol) was added to this mixture at room temperature and then heated again at 90°C for 1 day. Then volatiles were evaporated in vacuum to dryness. The residue was dissolved in CH2Cl2 and filtered via cannula on celite. The desired product was obtained after concentration of CH2Cl2 (15 ml) and then precipitated with hexane (30 ml). The off-white solid obtained in 86% yield. M. p. 416–418 K. 1H NMR (400 MHz, CDCl3, δ p.p.m.): 1.26 (s, 6H, o-(CH3)2); 1.36(s, 6H, m-(CH3)2); 2.13–2.20 (s, 3H, p-CH3); 5.50 (s, 2H, N—CH2); 6.86 (s, 1H, Ar—CH); 7.11 (s, 1H, Ar—CH); 7.26 (s, 1H, Ar—CH); 7.35 (s, 1H, Ar—CH); 7.49 (s, 1H, Ar—CH); 8.46 (s, 1H, Ar—CH); 10.19 (s, 2H, Ar—CH). 13C NMR (100.56 MHz, CDCl3, δ p.p.m.): 17.0; 17.4; 29.6; 31.7; 34.4; 35.2; 48.7; 49.3; 56.2; 117.9; 121.2; 122.4; 125.5; 126.5; 133.8; 134.0; 137.5; 140.7; 158.0; 167.9.
All H atoms were placed geometrically and refined using a riding model approximation, with C—H = 0.93–0.97 Å, and with Uiso(H) = 1.2 Ueq(C) or 1.5 Ueq(C) for methyl H atoms. A rotating group model was applied to the methyl groups.
Data collection: APEX2 (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: WinGX (Farrugia, 2012).C24H25N3 | F(000) = 760 |
Mr = 355.47 | Dx = 1.242 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
a = 5.3470 (3) Å | Cell parameters from 1276 reflections |
b = 21.0622 (12) Å | θ = 2.3–31.5° |
c = 17.0379 (9) Å | µ = 0.07 mm−1 |
β = 97.699 (3)° | T = 296 K |
V = 1901.50 (18) Å3 | Prism, yellow |
Z = 4 | 0.25 × 0.20 × 0.15 mm |
Bruker APEXII CCD diffractometer | 3056 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.026 |
ϕ and ω scans | θmax = 26.0°, θmin = 2.3° |
Absorption correction: multi-scan (Blessing, 1995) | h = −6→6 |
Tmin = 0.982, Tmax = 0.989 | k = −25→25 |
25354 measured reflections | l = −21→20 |
3741 independent reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.052 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.150 | H-atom parameters constrained |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0775P)2 + 0.5927P] where P = (Fo2 + 2Fc2)/3 |
3741 reflections | (Δ/σ)max < 0.001 |
254 parameters | Δρmax = 0.24 e Å−3 |
0 restraints | Δρmin = −0.17 e Å−3 |
C24H25N3 | V = 1901.50 (18) Å3 |
Mr = 355.47 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 5.3470 (3) Å | µ = 0.07 mm−1 |
b = 21.0622 (12) Å | T = 296 K |
c = 17.0379 (9) Å | 0.25 × 0.20 × 0.15 mm |
β = 97.699 (3)° |
Bruker APEXII CCD diffractometer | 3741 independent reflections |
Absorption correction: multi-scan (Blessing, 1995) | 3056 reflections with I > 2σ(I) |
Tmin = 0.982, Tmax = 0.989 | Rint = 0.026 |
25354 measured reflections |
R[F2 > 2σ(F2)] = 0.052 | 0 restraints |
wR(F2) = 0.150 | H-atom parameters constrained |
S = 1.04 | Δρmax = 0.24 e Å−3 |
3741 reflections | Δρmin = −0.17 e Å−3 |
254 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
C1 | 1.0873 (5) | 0.86580 (11) | 0.44231 (14) | 0.0724 (6) | |
H1 | 1.2174 | 0.8428 | 0.4246 | 0.087* | |
C2 | 1.0060 (5) | 0.91952 (12) | 0.40152 (14) | 0.0737 (6) | |
H2 | 1.0790 | 0.9327 | 0.3577 | 0.088* | |
C3 | 0.8151 (5) | 0.95308 (12) | 0.42706 (16) | 0.0842 (7) | |
H3 | 0.7548 | 0.9900 | 0.4011 | 0.101* | |
C4 | 0.7133 (5) | 0.93151 (10) | 0.49165 (15) | 0.0771 (7) | |
H4 | 0.5809 | 0.9535 | 0.5094 | 0.092* | |
C5 | 0.8068 (3) | 0.87716 (7) | 0.53054 (11) | 0.0465 (4) | |
C6 | 0.6926 (3) | 0.85653 (7) | 0.60059 (10) | 0.0452 (4) | |
C7 | 0.4595 (4) | 0.86110 (8) | 0.69313 (11) | 0.0507 (4) | |
C8 | 0.2891 (4) | 0.87790 (10) | 0.74483 (13) | 0.0658 (6) | |
H8 | 0.2014 | 0.9161 | 0.7387 | 0.079* | |
C9 | 0.2541 (4) | 0.83708 (10) | 0.80460 (13) | 0.0667 (6) | |
H9 | 0.1414 | 0.8477 | 0.8396 | 0.080* | |
C10 | 0.3850 (4) | 0.77962 (10) | 0.81392 (12) | 0.0598 (5) | |
H10 | 0.3597 | 0.7531 | 0.8558 | 0.072* | |
C11 | 0.5507 (4) | 0.76104 (9) | 0.76284 (10) | 0.0505 (4) | |
H11 | 0.6360 | 0.7225 | 0.7690 | 0.061* | |
C12 | 0.5841 (3) | 0.80251 (8) | 0.70185 (10) | 0.0432 (4) | |
C13 | 0.8894 (3) | 0.74472 (7) | 0.62583 (10) | 0.0422 (4) | |
H13A | 1.0264 | 0.7410 | 0.6691 | 0.051* | |
H13B | 0.9632 | 0.7525 | 0.5777 | 0.051* | |
C14 | 0.7459 (3) | 0.68215 (7) | 0.61734 (9) | 0.0370 (4) | |
C15 | 0.5434 (3) | 0.67529 (7) | 0.55618 (9) | 0.0391 (4) | |
C16 | 0.4047 (3) | 0.61901 (8) | 0.54888 (10) | 0.0452 (4) | |
C17 | 0.4753 (3) | 0.56796 (8) | 0.59946 (11) | 0.0471 (4) | |
C18 | 0.6838 (3) | 0.57318 (7) | 0.65801 (10) | 0.0448 (4) | |
C19 | 0.8190 (3) | 0.63066 (7) | 0.66771 (10) | 0.0412 (4) | |
C20 | 0.4783 (4) | 0.72858 (9) | 0.49769 (10) | 0.0511 (4) | |
H20A | 0.406 (3) | 0.7111 (2) | 0.4472 (7) | 0.077* | |
H20B | 0.630 (2) | 0.7521 (5) | 0.4912 (6) | 0.077* | |
H20C | 0.357 (2) | 0.7567 (5) | 0.5172 (5) | 0.077* | |
C21 | 0.1762 (4) | 0.61342 (11) | 0.48609 (14) | 0.0703 (6) | |
H21A | 0.2254 (10) | 0.5965 (8) | 0.4399 (8) | 0.105* | |
H21B | 0.106 (2) | 0.6535 (6) | 0.4754 (8) | 0.105* | |
H21C | 0.057 (2) | 0.5868 (8) | 0.5043 (5) | 0.105* | |
C22 | 0.3235 (5) | 0.50692 (10) | 0.59025 (15) | 0.0710 (6) | |
H22A | 0.314 (3) | 0.4923 (5) | 0.5373 (9) | 0.107* | |
H22B | 0.158 (3) | 0.5146 (2) | 0.6025 (10) | 0.107* | |
H22C | 0.403 (2) | 0.4757 (5) | 0.6251 (9) | 0.107* | |
C23 | 0.7616 (5) | 0.51661 (9) | 0.71064 (13) | 0.0655 (6) | |
H23A | 0.626 (2) | 0.5047 (5) | 0.7383 (8) | 0.098* | |
H23B | 0.904 (3) | 0.5276 (3) | 0.7476 (8) | 0.098* | |
H23C | 0.803 (3) | 0.4820 (6) | 0.6790 (5) | 0.098* | |
C24 | 1.0435 (4) | 0.63574 (10) | 0.73176 (13) | 0.0630 (5) | |
H24A | 1.168 (2) | 0.6592 (7) | 0.7134 (4) | 0.094* | |
H24B | 1.104 (2) | 0.5960 (6) | 0.7452 (7) | 0.094* | |
H24C | 0.9950 (10) | 0.6551 (7) | 0.7754 (7) | 0.094* | |
N1 | 0.9926 (3) | 0.84413 (8) | 0.50574 (10) | 0.0616 (4) | |
N2 | 0.5315 (3) | 0.89400 (7) | 0.63031 (10) | 0.0561 (4) | |
N3 | 0.7309 (3) | 0.79969 (6) | 0.64092 (8) | 0.0406 (3) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0797 (15) | 0.0651 (13) | 0.0780 (14) | 0.0052 (11) | 0.0312 (12) | 0.0205 (11) |
C2 | 0.0844 (16) | 0.0737 (14) | 0.0641 (13) | −0.0104 (12) | 0.0138 (12) | 0.0232 (11) |
C3 | 0.1041 (19) | 0.0620 (14) | 0.0871 (17) | 0.0111 (13) | 0.0152 (15) | 0.0351 (13) |
C4 | 0.0940 (17) | 0.0516 (12) | 0.0889 (16) | 0.0184 (11) | 0.0244 (14) | 0.0216 (11) |
C5 | 0.0539 (10) | 0.0329 (8) | 0.0517 (10) | −0.0066 (7) | 0.0031 (8) | 0.0006 (7) |
C6 | 0.0522 (10) | 0.0305 (8) | 0.0519 (10) | −0.0019 (7) | 0.0034 (8) | −0.0032 (7) |
C7 | 0.0580 (11) | 0.0396 (9) | 0.0551 (10) | −0.0025 (8) | 0.0099 (9) | −0.0119 (8) |
C8 | 0.0756 (14) | 0.0522 (11) | 0.0726 (13) | 0.0050 (10) | 0.0212 (11) | −0.0188 (10) |
C9 | 0.0737 (14) | 0.0657 (13) | 0.0651 (13) | −0.0053 (11) | 0.0261 (11) | −0.0210 (11) |
C10 | 0.0732 (13) | 0.0590 (11) | 0.0490 (10) | −0.0122 (10) | 0.0152 (9) | −0.0084 (9) |
C11 | 0.0582 (11) | 0.0457 (9) | 0.0476 (10) | −0.0050 (8) | 0.0070 (8) | −0.0042 (7) |
C12 | 0.0451 (9) | 0.0397 (8) | 0.0442 (9) | −0.0072 (7) | 0.0038 (7) | −0.0087 (7) |
C13 | 0.0405 (9) | 0.0345 (8) | 0.0514 (9) | 0.0012 (6) | 0.0059 (7) | 0.0014 (7) |
C14 | 0.0395 (8) | 0.0319 (7) | 0.0407 (8) | 0.0008 (6) | 0.0096 (6) | −0.0031 (6) |
C15 | 0.0416 (8) | 0.0382 (8) | 0.0389 (8) | 0.0030 (6) | 0.0108 (7) | −0.0045 (6) |
C16 | 0.0441 (9) | 0.0449 (9) | 0.0479 (9) | −0.0036 (7) | 0.0108 (7) | −0.0122 (7) |
C17 | 0.0536 (10) | 0.0381 (9) | 0.0538 (10) | −0.0077 (7) | 0.0227 (8) | −0.0116 (7) |
C18 | 0.0574 (10) | 0.0339 (8) | 0.0473 (9) | 0.0041 (7) | 0.0230 (8) | −0.0003 (7) |
C19 | 0.0453 (9) | 0.0367 (8) | 0.0426 (8) | 0.0044 (7) | 0.0094 (7) | 0.0000 (6) |
C20 | 0.0573 (11) | 0.0504 (10) | 0.0441 (9) | 0.0048 (8) | 0.0010 (8) | 0.0003 (8) |
C21 | 0.0589 (12) | 0.0747 (14) | 0.0738 (14) | −0.0118 (11) | −0.0033 (11) | −0.0163 (11) |
C22 | 0.0808 (15) | 0.0505 (11) | 0.0862 (15) | −0.0231 (10) | 0.0274 (12) | −0.0111 (10) |
C23 | 0.0940 (16) | 0.0398 (10) | 0.0665 (13) | 0.0052 (10) | 0.0247 (11) | 0.0093 (9) |
C24 | 0.0675 (13) | 0.0540 (11) | 0.0624 (12) | 0.0037 (9) | −0.0094 (10) | 0.0093 (9) |
N1 | 0.0691 (10) | 0.0521 (9) | 0.0671 (10) | 0.0057 (8) | 0.0216 (8) | 0.0180 (8) |
N2 | 0.0697 (10) | 0.0346 (7) | 0.0650 (10) | 0.0040 (7) | 0.0129 (8) | −0.0039 (7) |
N3 | 0.0456 (7) | 0.0305 (6) | 0.0455 (7) | −0.0029 (5) | 0.0056 (6) | −0.0021 (5) |
C1—N1 | 1.334 (3) | C13—H13B | 0.9700 |
C1—C2 | 1.368 (3) | C14—C19 | 1.405 (2) |
C1—H1 | 0.9300 | C14—C15 | 1.406 (2) |
C2—C3 | 1.360 (4) | C15—C16 | 1.395 (2) |
C2—H2 | 0.9300 | C15—C20 | 1.510 (2) |
C3—C4 | 1.369 (3) | C16—C17 | 1.398 (3) |
C3—H3 | 0.9300 | C16—C21 | 1.517 (3) |
C4—C5 | 1.382 (3) | C17—C18 | 1.397 (3) |
C4—H4 | 0.9300 | C17—C22 | 1.517 (2) |
C5—N1 | 1.328 (2) | C18—C19 | 1.408 (2) |
C5—C6 | 1.477 (3) | C18—C23 | 1.515 (2) |
C6—N2 | 1.319 (2) | C19—C24 | 1.514 (3) |
C6—N3 | 1.382 (2) | C20—H20A | 0.968 (12) |
C7—N2 | 1.373 (2) | C20—H20B | 0.968 (13) |
C7—C8 | 1.395 (3) | C20—H20C | 0.968 (12) |
C7—C12 | 1.401 (2) | C21—H21A | 0.933 (14) |
C8—C9 | 1.365 (3) | C21—H21B | 0.933 (14) |
C8—H8 | 0.9300 | C21—H21C | 0.933 (14) |
C9—C10 | 1.396 (3) | C22—H22A | 0.948 (14) |
C9—H9 | 0.9300 | C22—H22B | 0.948 (14) |
C10—C11 | 1.379 (3) | C22—H22C | 0.948 (14) |
C10—H10 | 0.9300 | C23—H23A | 0.951 (14) |
C11—C12 | 1.387 (2) | C23—H23B | 0.951 (14) |
C11—H11 | 0.9300 | C23—H23C | 0.951 (13) |
C12—N3 | 1.384 (2) | C24—H24A | 0.915 (14) |
C13—N3 | 1.478 (2) | C24—H24B | 0.915 (13) |
C13—C14 | 1.522 (2) | C24—H24C | 0.915 (13) |
C13—H13A | 0.9700 | ||
N1—C1—C2 | 124.4 (2) | C15—C16—C17 | 120.14 (16) |
N1—C1—H1 | 117.8 | C15—C16—C21 | 119.82 (17) |
C2—C1—H1 | 117.8 | C17—C16—C21 | 120.05 (16) |
C3—C2—C1 | 117.9 (2) | C18—C17—C16 | 120.23 (15) |
C3—C2—H2 | 121.0 | C18—C17—C22 | 120.34 (17) |
C1—C2—H2 | 121.0 | C16—C17—C22 | 119.42 (18) |
C2—C3—C4 | 118.7 (2) | C17—C18—C19 | 119.95 (15) |
C2—C3—H3 | 120.6 | C17—C18—C23 | 119.35 (16) |
C4—C3—H3 | 120.6 | C19—C18—C23 | 120.69 (17) |
C3—C4—C5 | 120.2 (2) | C14—C19—C18 | 119.69 (15) |
C3—C4—H4 | 119.9 | C14—C19—C24 | 120.95 (15) |
C5—C4—H4 | 119.9 | C18—C19—C24 | 119.35 (15) |
N1—C5—C4 | 121.30 (19) | C15—C20—H20A | 109.5 |
N1—C5—C6 | 120.74 (15) | C15—C20—H20B | 109.5 |
C4—C5—C6 | 117.96 (18) | H20A—C20—H20B | 109.5 |
N2—C6—N3 | 112.86 (16) | C15—C20—H20C | 109.5 |
N2—C6—C5 | 119.77 (15) | H20A—C20—H20C | 109.5 |
N3—C6—C5 | 127.37 (15) | H20B—C20—H20C | 109.5 |
N2—C7—C8 | 129.74 (18) | C16—C21—H21A | 109.5 |
N2—C7—C12 | 110.39 (16) | C16—C21—H21B | 109.5 |
C8—C7—C12 | 119.87 (18) | H21A—C21—H21B | 109.5 |
C9—C8—C7 | 118.6 (2) | C16—C21—H21C | 109.5 |
C9—C8—H8 | 120.7 | H21A—C21—H21C | 109.5 |
C7—C8—H8 | 120.7 | H21B—C21—H21C | 109.5 |
C8—C9—C10 | 120.93 (19) | C17—C22—H22A | 109.5 |
C8—C9—H9 | 119.5 | C17—C22—H22B | 109.5 |
C10—C9—H9 | 119.5 | H22A—C22—H22B | 109.5 |
C11—C10—C9 | 121.92 (19) | C17—C22—H22C | 109.5 |
C11—C10—H10 | 119.0 | H22A—C22—H22C | 109.5 |
C9—C10—H10 | 119.0 | H22B—C22—H22C | 109.5 |
C10—C11—C12 | 116.88 (18) | C18—C23—H23A | 109.5 |
C10—C11—H11 | 121.6 | C18—C23—H23B | 109.5 |
C12—C11—H11 | 121.6 | H23A—C23—H23B | 109.5 |
N3—C12—C11 | 132.66 (16) | C18—C23—H23C | 109.5 |
N3—C12—C7 | 105.53 (15) | H23A—C23—H23C | 109.5 |
C11—C12—C7 | 121.80 (17) | H23B—C23—H23C | 109.5 |
N3—C13—C14 | 113.67 (13) | C19—C24—H24A | 109.5 |
N3—C13—H13A | 108.8 | C19—C24—H24B | 109.5 |
C14—C13—H13A | 108.8 | H24A—C24—H24B | 109.5 |
N3—C13—H13B | 108.8 | C19—C24—H24C | 109.5 |
C14—C13—H13B | 108.8 | H24A—C24—H24C | 109.5 |
H13A—C13—H13B | 107.7 | H24B—C24—H24C | 109.5 |
C19—C14—C15 | 119.78 (14) | C5—N1—C1 | 117.39 (17) |
C19—C14—C13 | 120.99 (14) | C6—N2—C7 | 105.26 (15) |
C15—C14—C13 | 119.19 (14) | C6—N3—C12 | 105.94 (13) |
C16—C15—C14 | 120.06 (15) | C6—N3—C13 | 129.98 (14) |
C16—C15—C20 | 119.99 (15) | C12—N3—C13 | 124.08 (13) |
C14—C15—C20 | 119.95 (14) | ||
N1—C1—C2—C3 | −0.2 (4) | C15—C16—C17—C22 | −179.52 (16) |
C1—C2—C3—C4 | −0.3 (4) | C21—C16—C17—C22 | 0.7 (3) |
C2—C3—C4—C5 | 1.0 (4) | C16—C17—C18—C19 | 1.9 (2) |
C3—C4—C5—N1 | −1.2 (4) | C22—C17—C18—C19 | −178.06 (16) |
C3—C4—C5—C6 | 179.1 (2) | C16—C17—C18—C23 | −178.23 (16) |
N1—C5—C6—N2 | 171.36 (17) | C22—C17—C18—C23 | 1.8 (2) |
C4—C5—C6—N2 | −9.0 (3) | C15—C14—C19—C18 | −1.9 (2) |
N1—C5—C6—N3 | −9.7 (3) | C13—C14—C19—C18 | −179.49 (14) |
C4—C5—C6—N3 | 169.96 (19) | C15—C14—C19—C24 | 177.28 (16) |
N2—C7—C8—C9 | −178.4 (2) | C13—C14—C19—C24 | −0.3 (2) |
C12—C7—C8—C9 | 1.9 (3) | C17—C18—C19—C14 | −1.2 (2) |
C7—C8—C9—C10 | −0.1 (3) | C23—C18—C19—C14 | 178.93 (15) |
C8—C9—C10—C11 | −1.2 (3) | C17—C18—C19—C24 | 179.62 (16) |
C9—C10—C11—C12 | 0.7 (3) | C23—C18—C19—C24 | −0.3 (2) |
C10—C11—C12—N3 | −179.82 (17) | C4—C5—N1—C1 | 0.7 (3) |
C10—C11—C12—C7 | 1.1 (3) | C6—C5—N1—C1 | −179.67 (18) |
N2—C7—C12—N3 | −1.48 (19) | C2—C1—N1—C5 | 0.1 (4) |
C8—C7—C12—N3 | 178.23 (17) | N3—C6—N2—C7 | 0.2 (2) |
N2—C7—C12—C11 | 177.79 (16) | C5—C6—N2—C7 | 179.26 (15) |
C8—C7—C12—C11 | −2.5 (3) | C8—C7—N2—C6 | −178.8 (2) |
N3—C13—C14—C19 | −121.53 (16) | C12—C7—N2—C6 | 0.8 (2) |
N3—C13—C14—C15 | 60.88 (19) | N2—C6—N3—C12 | −1.10 (19) |
C19—C14—C15—C16 | 4.3 (2) | C5—C6—N3—C12 | 179.91 (16) |
C13—C14—C15—C16 | −178.05 (14) | N2—C6—N3—C13 | 178.34 (15) |
C19—C14—C15—C20 | −174.84 (15) | C5—C6—N3—C13 | −0.7 (3) |
C13—C14—C15—C20 | 2.8 (2) | C11—C12—N3—C6 | −177.65 (18) |
C14—C15—C16—C17 | −3.6 (2) | C7—C12—N3—C6 | 1.50 (17) |
C20—C15—C16—C17 | 175.52 (15) | C11—C12—N3—C13 | 2.9 (3) |
C14—C15—C16—C21 | 176.10 (16) | C7—C12—N3—C13 | −177.98 (14) |
C20—C15—C16—C21 | −4.7 (2) | C14—C13—N3—C6 | −125.33 (17) |
C15—C16—C17—C18 | 0.5 (2) | C14—C13—N3—C12 | 54.0 (2) |
C21—C16—C17—C18 | −179.21 (16) |
Cg is the centroid of the C7–C12 benzene ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
C13—H13A···Cgi | 0.97 | 2.91 | 3.6941 (18) | 139 |
C13—H13B···N1 | 0.97 | 2.30 | 3.029 (2) | 131 |
Symmetry code: (i) x−1, y, z. |
Cg is the centroid of the C7–C12 benzene ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
C13—H13A···Cgi | 0.97 | 2.91 | 3.6941 (18) | 139 |
C13—H13B···N1 | 0.97 | 2.30 | 3.029 (2) | 131 |
Symmetry code: (i) x−1, y, z. |
Acknowledgements
The authors are indebted to the X-ray laboratory of Dicle University Science and the Technology Application and Research Center, Diyarbakir, Turkey, for use of the X-ray diffractometer.
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The N—N type ligand system 2-(2-pyridyl)benzimidazole has a venerable history in coordination chemistry (Sahin et al., 2010; Harkins et al., 1956; Chiswell et al., 1964; De Castro et al., 1991; Maekawa et al., 1994; Khalil et al., 2001; Boca et al., 1997). Lots of platinum chemistry bearing N—N type ligand systems involving 2,2'-bipyridine has been reported aimed at the design of drugs having less serious side-effects than those of cisplatin, or which could extend the scope of Pt based chemotherapy to tumours (Lippert, 1999; Wong & Giandomenico, 1999; Kelland & Farrell, 2000).
The molecular structure of the title compound is shown in Fig. 1. Bond lengths and angles are in good agreement with those reported for related structures (Çelik et al., 2007; Çelik et al., 2009; Çelik et al., 2014). The benzimidazole ring system is substantially planar, the maximum deviation being 0.027 (2) Å for atom C8, and forms dihedral angles of 7.81 (5) and 87.61 (4)° with the mean planes through the pyridine (N1/C1–C5) and phenyl (C14–C19) rings, respectively. An intramolecular C—H···N hydrogen bond is present (Table 1). In the crystal structure (Fig. 2), molecules are stacked along the a axis by weak C—H···π hydrogen interactions (Table 1) involving the C7—C12 benzene ring of the benzimidazole moiety.