organic compounds
of the borabenzene–2,6-lutidine adduct
aDepartment of Chemistry, University of Jyväskylä, PO Box 35, FI-40014 Jyväskylä, Finland
*Correspondence e-mail: matti.o.haukka@jyu.fi
In the title compound, C12H14BN, the complete molecule is generated by a crystallographic twofold axis, with two C atoms, the B atom and the N atom lying on the rotation axis. The dihedral angle between the borabenzene and pyridine rings is 81.20 (6)°. As well as dative electron donation from the N atom to the B atom [B—N = 1.5659 (18) Å], the methyl substituents on the lutidine ring shield the B atom, which further stabilizes the molecule. In the crystal, weak aromatic π–π stacking between the pyridine rings [centroid–centroid separation = 3.6268 (9) Å] is observed, which generates [001] columns of molecules.
Keywords: crystal structure; borabenzene; π–π stacking.
CCDC reference: 1434350
1. Related literature
For the synthesis of the title compound, see: Hoic et al. (1996). For a related structure, see: Boese et al. (1985). For borabenzene adducts as analogues of cyclopentadienyl anions (Cp), see: Bazan et al. (2000); Wang et al. (2002); Cui et al. (2010). For the uses of borabenzenes and their metal complexes, see: Wang et al. (2002; Jaska et al. (2006).
2. Experimental
2.1. Crystal data
|
2.3. Refinement
|
Data collection: COLLECT (Bruker, 2008); cell DENZO/SCALEPACK (Otwinowski & Minor, 1997); data reduction: DENZO/SCALEPACK; program(s) used to solve structure: SUPERFLIP (Palatinus & Chapuis, 2007); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015); molecular graphics: CHIMERA (Pettersen et al., 2004); software used to prepare material for publication: SHELXL2014.
Supporting information
CCDC reference: 1434350
https://doi.org/10.1107/S2056989015020599/hb7526sup1.cif
contains datablock I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2056989015020599/hb7526Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2056989015020599/hb7526Isup3.mol
Supporting information file. DOI: https://doi.org/10.1107/S2056989015020599/hb7526Isup4.cml
The title compound lies on a two-fold rotational axis, which passes through atoms H3, C3, B1, N1, C6, and H6.
Borabenzene-2,6-lutidine is an example of nitrogen-stabilized borabenzene adducts. The nitrogen atom of the base (2,5-lutidine) donates an electron pair to the boron atom, and thus stabilizes the borabenzene ring. Borabenzene-2,6-lutidine has a zwitterionic nature. The nitrogen ring bears a positive charge, and the boron ring a negative charge.
Borabenzenes are analogous to cyclopentadienyl anions (Cp), althought they are generally weaker electron donors than Cp (Bazan et al., 2000; Wang et al., 2002 and Cui et al., 2010). Borabenzene rings can thus be used as a replacement for Cp when weaker electron donation properties are required. There is a growing interest to utilize borabenzenes and their metal complexes in several applications including catalytic and semiconducting materials as well as light-emitting devices (Wang et al., 2002 and Jaska et al., 2006).
The compound was synthesized according to the previously reported procedure (Hoic et al. 1996). X-ray quality crystals were obtained by using the following procedure: In a
borabenzene-2,6-lutidine was dissolved in pure toluene at room temperature until a was obtained. The clear solution was separated and and the solution was allowed to evaporate slowly. Formed crystals were collected from the solution after one week and were immediately taken to an X-ray In order to protect the crystals from air and moisture, the crystals were immersed to cryo oil before taking them out from the glove box.Crystal data, data collection and structure
details are summarized in Table 1. Hydrogen atoms were positioned geometrically and constrained to ride on their parent atoms, with C—H = 0.95-0.98 Å and Uiso = 1.2-1.5 Ueq(parent atom). The highest peak is located 0.69 Å from atom C5 and the deepest hole is located 0.67 Å from atom N1.The title compound lies on a two-fold rotational axis, which passes through atoms H3, C3, B1, N1, C6, and H6.
Borabenzene-2,6-lutidine is an example of nitrogen-stabilized borabenzene adducts. The nitrogen atom of the base (2,5-lutidine) donates an electron pair to the boron atom, and thus stabilizes the borabenzene ring. Borabenzene-2,6-lutidine has a zwitterionic nature. The nitrogen ring bears a positive charge, and the boron ring a negative charge.
Borabenzenes are analogous to cyclopentadienyl anions (Cp), althought they are generally weaker electron donors than Cp (Bazan et al., 2000; Wang et al., 2002 and Cui et al., 2010). Borabenzene rings can thus be used as a replacement for Cp when weaker electron donation properties are required. There is a growing interest to utilize borabenzenes and their metal complexes in several applications including catalytic and semiconducting materials as well as light-emitting devices (Wang et al., 2002 and Jaska et al., 2006).
For the synthesis of the title compound, see: Hoic et al. (1996). For a related structure, see: Boese et al. (1985). For borabenzene adducts as analogues of cyclopentadienyl anions (Cp), see: Bazan et al. (2000); Wang et al. (2002); Cui et al. (2010). For the uses of borabenzenes and their metal complexes, see: Wang et al. (2002; Jaska et al. (2006).
The compound was synthesized according to the previously reported procedure (Hoic et al. 1996). X-ray quality crystals were obtained by using the following procedure: In a
borabenzene-2,6-lutidine was dissolved in pure toluene at room temperature until a was obtained. The clear solution was separated and and the solution was allowed to evaporate slowly. Formed crystals were collected from the solution after one week and were immediately taken to an X-ray In order to protect the crystals from air and moisture, the crystals were immersed to cryo oil before taking them out from the glove box. detailsCrystal data, data collection and structure
details are summarized in Table 1. Hydrogen atoms were positioned geometrically and constrained to ride on their parent atoms, with C—H = 0.95-0.98 Å and Uiso = 1.2-1.5 Ueq(parent atom). The highest peak is located 0.69 Å from atom C5 and the deepest hole is located 0.67 Å from atom N1.Data collection: COLLECT (Bruker, 2008); cell
DENZO/SCALEPACK (Otwinowski & Minor, 1997); data reduction: DENZO/SCALEPACK (Otwinowski & Minor, 1997); program(s) used to solve structure: SUPERFLIP (Palatinus & Chapuis, 2007); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015); molecular graphics: CHIMERA (Pettersen et al., 2004); software used to prepare material for publication: SHELXL2014 (Sheldrick, 2015).Fig. 1. The molecular structure of the title compound, with atom labels and 50% probability displacement ellipsoids for non-H atoms. |
C12H14BN | F(000) = 392 |
Mr = 183.05 | Dx = 1.178 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
a = 10.008 (2) Å | Cell parameters from 10098 reflections |
b = 14.447 (3) Å | θ = 1.0–28.7° |
c = 7.1360 (14) Å | µ = 0.07 mm−1 |
β = 90.16 (3)° | T = 120 K |
V = 1031.8 (4) Å3 | Needle, yellow |
Z = 4 | 0.24 × 0.18 × 0.16 mm |
Bruker Kappa APEXII CCD diffractometer | 1482 independent reflections |
Radiation source: fine-focus sealed tube | 1280 reflections with I > 2σ(I) |
Horizontally mounted graphite crystal monochromator | Rint = 0.028 |
Detector resolution: 16 pixels mm-1 | θmax = 30.0°, θmin = 4.0° |
φ scans and ω scans with κ offset | h = −14→14 |
Absorption correction: multi-scan (SADABS; Bruker, 2012) | k = −16→20 |
Tmin = 0.646, Tmax = 0.746 | l = −9→9 |
7258 measured reflections |
Refinement on F2 | 0 restraints |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.044 | H-atom parameters constrained |
wR(F2) = 0.120 | w = 1/[σ2(Fo2) + (0.0555P)2 + 0.6142P] where P = (Fo2 + 2Fc2)/3 |
S = 1.06 | (Δ/σ)max < 0.001 |
1482 reflections | Δρmax = 0.30 e Å−3 |
67 parameters | Δρmin = −0.17 e Å−3 |
C12H14BN | V = 1031.8 (4) Å3 |
Mr = 183.05 | Z = 4 |
Monoclinic, C2/c | Mo Kα radiation |
a = 10.008 (2) Å | µ = 0.07 mm−1 |
b = 14.447 (3) Å | T = 120 K |
c = 7.1360 (14) Å | 0.24 × 0.18 × 0.16 mm |
β = 90.16 (3)° |
Bruker Kappa APEXII CCD diffractometer | 1482 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2012) | 1280 reflections with I > 2σ(I) |
Tmin = 0.646, Tmax = 0.746 | Rint = 0.028 |
7258 measured reflections |
R[F2 > 2σ(F2)] = 0.044 | 0 restraints |
wR(F2) = 0.120 | H-atom parameters constrained |
S = 1.06 | Δρmax = 0.30 e Å−3 |
1482 reflections | Δρmin = −0.17 e Å−3 |
67 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
N1 | 0.5000 | 0.38254 (7) | 0.7500 | 0.0182 (2) | |
C1 | 0.43941 (9) | 0.22210 (7) | 0.59114 (13) | 0.0229 (2) | |
H1 | 0.3993 | 0.2534 | 0.4883 | 0.028* | |
C2 | 0.44362 (10) | 0.12556 (7) | 0.59879 (14) | 0.0246 (2) | |
H2 | 0.4069 | 0.0910 | 0.4977 | 0.030* | |
C3 | 0.5000 | 0.07806 (9) | 0.7500 | 0.0254 (3) | |
H3 | 0.5000 | 0.0123 | 0.7500 | 0.031* | |
C4 | 0.38816 (9) | 0.42921 (7) | 0.80474 (12) | 0.0197 (2) | |
C5 | 0.38693 (9) | 0.52523 (7) | 0.80370 (13) | 0.0225 (2) | |
H5 | 0.3086 | 0.5578 | 0.8398 | 0.027* | |
C6 | 0.5000 | 0.57352 (9) | 0.7500 | 0.0241 (3) | |
H6 | 0.5000 | 0.6393 | 0.7500 | 0.029* | |
C7 | 0.26941 (10) | 0.37460 (7) | 0.86747 (15) | 0.0258 (2) | |
H7A | 0.2957 | 0.3332 | 0.9699 | 0.039* | |
H7B | 0.2351 | 0.3379 | 0.7624 | 0.039* | |
H7C | 0.1996 | 0.4169 | 0.9112 | 0.039* | |
B1 | 0.5000 | 0.27415 (10) | 0.7500 | 0.0195 (3) |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0180 (5) | 0.0187 (5) | 0.0179 (5) | 0.000 | −0.0021 (4) | 0.000 |
C1 | 0.0222 (4) | 0.0228 (5) | 0.0239 (5) | −0.0022 (3) | −0.0018 (3) | 0.0003 (3) |
C2 | 0.0222 (4) | 0.0235 (5) | 0.0282 (5) | −0.0047 (3) | 0.0024 (4) | −0.0045 (4) |
C3 | 0.0230 (6) | 0.0179 (6) | 0.0355 (7) | 0.000 | 0.0068 (5) | 0.000 |
C4 | 0.0183 (4) | 0.0224 (4) | 0.0183 (4) | 0.0011 (3) | −0.0013 (3) | 0.0003 (3) |
C5 | 0.0237 (5) | 0.0221 (5) | 0.0218 (5) | 0.0042 (3) | 0.0006 (3) | −0.0004 (3) |
C6 | 0.0309 (7) | 0.0193 (6) | 0.0220 (6) | 0.000 | −0.0004 (5) | 0.000 |
C7 | 0.0195 (4) | 0.0268 (5) | 0.0312 (5) | −0.0010 (3) | 0.0025 (4) | −0.0003 (4) |
B1 | 0.0177 (6) | 0.0177 (6) | 0.0230 (6) | 0.000 | −0.0002 (5) | 0.000 |
N1—C4i | 1.3647 (11) | C4—C5 | 1.3874 (13) |
N1—C4 | 1.3647 (11) | C4—C7 | 1.4961 (13) |
N1—B1 | 1.5659 (18) | C5—C6 | 1.3843 (12) |
C1—C2 | 1.3964 (14) | C5—H5 | 0.9500 |
C1—B1 | 1.4881 (12) | C6—C5i | 1.3843 (12) |
C1—H1 | 0.9500 | C6—H6 | 0.9500 |
C2—C3 | 1.3965 (13) | C7—H7A | 0.9800 |
C2—H2 | 0.9500 | C7—H7B | 0.9800 |
C3—C2i | 1.3966 (13) | C7—H7C | 0.9800 |
C3—H3 | 0.9500 | B1—C1i | 1.4881 (12) |
C4i—N1—C4 | 120.78 (11) | C6—C5—C4 | 119.88 (9) |
C4i—N1—B1 | 119.61 (6) | C6—C5—H5 | 120.1 |
C4—N1—B1 | 119.61 (6) | C4—C5—H5 | 120.1 |
C2—C1—B1 | 117.56 (9) | C5i—C6—C5 | 119.48 (13) |
C2—C1—H1 | 121.2 | C5i—C6—H6 | 120.3 |
B1—C1—H1 | 121.2 | C5—C6—H6 | 120.3 |
C1—C2—C3 | 122.22 (9) | C4—C7—H7A | 109.5 |
C1—C2—H2 | 118.9 | C4—C7—H7B | 109.5 |
C3—C2—H2 | 118.9 | H7A—C7—H7B | 109.5 |
C2—C3—C2i | 121.13 (13) | C4—C7—H7C | 109.5 |
C2—C3—H3 | 119.4 | H7A—C7—H7C | 109.5 |
C2i—C3—H3 | 119.4 | H7B—C7—H7C | 109.5 |
N1—C4—C5 | 119.99 (9) | C1—B1—C1i | 119.30 (12) |
N1—C4—C7 | 118.55 (9) | C1—B1—N1 | 120.35 (6) |
C5—C4—C7 | 121.46 (8) | C1i—B1—N1 | 120.35 (6) |
B1—C1—C2—C3 | 1.10 (12) | C4—C5—C6—C5i | 0.52 (6) |
C1—C2—C3—C2i | −0.59 (7) | C2—C1—B1—C1i | −0.53 (6) |
C4i—N1—C4—C5 | 0.52 (6) | C2—C1—B1—N1 | 179.47 (6) |
B1—N1—C4—C5 | −179.47 (6) | C4i—N1—B1—C1 | −98.80 (6) |
C4i—N1—C4—C7 | −178.65 (9) | C4—N1—B1—C1 | 81.20 (6) |
B1—N1—C4—C7 | 1.35 (9) | C4i—N1—B1—C1i | 81.20 (6) |
N1—C4—C5—C6 | −1.05 (12) | C4—N1—B1—C1i | −98.80 (6) |
C7—C4—C5—C6 | 178.10 (7) |
Symmetry code: (i) −x+1, y, −z+3/2. |
Experimental details
Crystal data | |
Chemical formula | C12H14BN |
Mr | 183.05 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 120 |
a, b, c (Å) | 10.008 (2), 14.447 (3), 7.1360 (14) |
β (°) | 90.16 (3) |
V (Å3) | 1031.8 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.07 |
Crystal size (mm) | 0.24 × 0.18 × 0.16 |
Data collection | |
Diffractometer | Bruker Kappa APEXII CCD |
Absorption correction | Multi-scan (SADABS; Bruker, 2012) |
Tmin, Tmax | 0.646, 0.746 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 7258, 1482, 1280 |
Rint | 0.028 |
(sin θ/λ)max (Å−1) | 0.703 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.044, 0.120, 1.06 |
No. of reflections | 1482 |
No. of parameters | 67 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.30, −0.17 |
Computer programs: COLLECT (Bruker, 2008), DENZO/SCALEPACK (Otwinowski & Minor, 1997), SUPERFLIP (Palatinus & Chapuis, 2007), SHELXL2014 (Sheldrick, 2015), CHIMERA (Pettersen et al., 2004).
References
Bazan, G. C., Cotter, W. D., Komon, Z. J. A., Lee, R. A. & Lachicotte, R. J. (2000). J. Am. Chem. Soc. 122, 1371–1380. Web of Science CSD CrossRef CAS Google Scholar
Boese, R., Finke, N., Henkelmann, J., Maier, G., Paetzold, P., Reisenauer, H. P. & Schmid, G. (1985). Chem. Ber. 118, 1644–1654. CrossRef CAS Web of Science Google Scholar
Bruker (2008). COLLECT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Bruker (2012). SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Cui, P., Chen, Y., Zhang, Q., Li, G. & Xia, W. (2010). J. Organomet. Chem. 695, 2713–2719. Web of Science CrossRef CAS Google Scholar
Hoic, D. A., Wolf, J. R., Davis, W. M. & Fu, G. C. (1996). Organometallics, 15, 1315–1318. CSD CrossRef CAS Web of Science Google Scholar
Jaska, C. A., Emslie, D. J. H., Bosdet, M. J. D., Piers, W. E., Sorensen, T. S. & Parvez, M. (2006). J. Am. Chem. Soc. 128, 10885–10896. Web of Science CSD CrossRef PubMed CAS Google Scholar
Otwinowski, Z. & Minor, W. (1997). Methods in Enzymology, Vol. 276, Macromolecular Crystallography, Part A, edited by C. W. Carter Jr & R. M. Sweet, pp. 307–326. New York: Academic Press. Google Scholar
Palatinus, L. & Chapuis, G. (2007). J. Appl. Cryst. 40, 786–790. Web of Science CrossRef CAS IUCr Journals Google Scholar
Pettersen, E. F., Goddard, T. D., Huang, C. C., Couch, G. S., Greenblatt, D. M., Meng, E. C. & Ferrin, T. E. (2004). J. Comput. Chem. 25, 1605–1612. Web of Science CrossRef PubMed CAS Google Scholar
Sheldrick, G. M. (2015). Acta Cryst. C71, 3–8. Web of Science CrossRef IUCr Journals Google Scholar
Wang, X., Zheng, X. & Herberich, G. E. (2002). Eur. J. Inorg. Chem. 2002, 31–41. CrossRef Google Scholar
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