organic compounds
tert-butylamino)-5-[2-oxo-4-(thiomorpholin-4-yl)-2H-chromen-3-yl]furan-3,4-dicarboxylate ethyl acetate hemisolvate
of 3,4-dimethyl 2-(aDepartment of Applied Chemistry, Graduate School of Engineering, Kyushu Institute of Technology, 1-1 Sensui-cho, Tobata-ku, Kitakyushu 804-8550, Japan, and bJapan Bruker AXS K.K.3-9, Moriya-cho Kanagawaku Yokohama 221-0022, Japan
*Correspondence e-mail: moriguch@che.kyutech.ac.jp
In the title hemisolvate, C25H28N2O7S·0.5C4H8O2, the thiomorpholine ring adopts a chair conformation, with the exocyclic N—C bond in an equatorial orientation. The dihedral angle between the coumarin ring system (r.m.s. deviation = 0.044 Å) and the furan ring is 64.84 (6)°. An intramolecular N—H⋯O hydrogen bond closes an S(6) ring. The ethyl acetate solvent molecule is disordered about a crystallographic inversion centre. In the crystal, the components are linked by C—H⋯O and C—H⋯S hydrogen bonds, generating a three-dimensional network.
Keywords: crystal structure; coumarins; thiomorpholine ring; hydrogen bonding.
CCDC reference: 1432824
1. Related literature
For the syntheses and properties of et al. (2010); Chodankar & Seshadri (1985); Khan & Kulkarni (1999); Kitamura et al. (2005); Luo et al. (2012); Sawa et al. (2006); Schiedel et al. (2001); Udaya Kumari et al. (2000); Zen et al. (2014).
see: Arango2. Experimental
2.1. Crystal data
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2.3. Refinement
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Data collection: APEX2 (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: Mercury (Macrae et al., 2008); software used to prepare material for publication: SHELXL97.
Supporting information
CCDC reference: 1432824
https://doi.org/10.1107/S2056989015021970/hb7531sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2056989015021970/hb7531Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2056989015021970/hb7531Isup3.cml
Coumarins analogs having furan heterocycle have gained significant importance because of their properties as anti-leishmania panamensis, dyes and fluorescent sensors. For the activity related reports of furyl π conjugation and consequently their optoelectronic properties can be improved. Due to their versatile properties a variety of 3-heteroaryl coumarin derivatives have been synthesized and tested for their optoelectronic properties. For the optoelectronic properties of coumarin derivatives, see: Sawa et al. (2006). For the synthesis related reports of 3-furyl coumarin derivatives, see: Chodankar et al. (1985); Khan & Kulkarni (1999); Udaya Kumari et al. (2000). Thus, the elucidation of the crystal structures of coumarin derivatives has attracted much attention. Here,we report the of the title compound, (I).
see: Arango et al. (2010); Zen et al. (2014); Schiedel et al. (2001); Kitamura et al. (2005). Natural furyl coumarin derivatives extracted from plants such as microminutin, micromelin, psoralen, 8-methoxypsoralen have important properties in medicinal chemistry and bio For the activity related reports of natural furyl see: Luo et al. (2012). It was well documented that by introducing a heteroaromatic substituent at 3-position the absorption and emission maxima of coumarin scaffold can be improved because of extendedA solution of 4-thiomorpholino-3-formyl coumarin (1 mmol), dmethyl acetylenedicarboxylate (1 mmol), t-butyl isocyanide (1 mmol) were refluxed at 80°C for 3h. The volatiles were removed under reduced pressure. The crude reaction mixture was subjected to
using EtOAc/Hexane mobile phase. The title compound was isolated as yellow color solid with 80% yield. Yellow prisms were obtained by vapour diffusion method at room temperature, i.e., hexane vapour was allowed to diffuse into an EtOAc solution of 4-thiomorpholino-3-(2-N-t-butylamino-3,4-dimethylcarboxylate-5-furyl) 2H-1-benzopyran-2-one at room temperature.mp 107-109 °C; IR; νmax(KBr) 3288, 1732, 1728, 1667, 1658, 1618, 1418, 1240, 1041 cm-1; δH (500 MHz CDCl3) 7.69 (1 H, d), 7.52 (1 H, t), 7.28-7.33 (2 H, dd), 7.05 (1 H, s), 3.78 (3 H, s), 3.75 (3 H, s), 3.39-3.48 (4 H, m), 2.77-2.81 (4 H, m), 1.44 (9 H, s); δC (125 MHz, CDCl3) 165.6, 163.9, 163.0, 161.2, 160.6, 153.4, 138.2, 132.4, 125.1, 123.7, 118.7, 118.1, 117.7, 103.6, 87.8, 53.2, 52.7, 51.8, 51.3, 28.0; LCMS: MH+, 501.
Coumarins analogs having furan heterocycle have gained significant importance because of their properties as anti-leishmania panamensis, dyes and fluorescent sensors. For the activity related reports of furyl π conjugation and consequently their optoelectronic properties can be improved. Due to their versatile properties a variety of 3-heteroaryl coumarin derivatives have been synthesized and tested for their optoelectronic properties. For the optoelectronic properties of coumarin derivatives, see: Sawa et al. (2006). For the synthesis related reports of 3-furyl coumarin derivatives, see: Chodankar et al. (1985); Khan & Kulkarni (1999); Udaya Kumari et al. (2000). Thus, the elucidation of the crystal structures of coumarin derivatives has attracted much attention. Here,we report the of the title compound, (I).
see: Arango et al. (2010); Zen et al. (2014); Schiedel et al. (2001); Kitamura et al. (2005). Natural furyl coumarin derivatives extracted from plants such as microminutin, micromelin, psoralen, 8-methoxypsoralen have important properties in medicinal chemistry and bio For the activity related reports of natural furyl see: Luo et al. (2012). It was well documented that by introducing a heteroaromatic substituent at 3-position the absorption and emission maxima of coumarin scaffold can be improved because of extendedFor the syntheses and properties of
see: Arango et al. (2010); Chodankar & Seshadri (1985); Khan & Kulkarni (1999); Kitamura et al. (2005); Luo et al. (2012); Sawa et al. (2006); Schiedel et al. (2001); Udaya Kumari et al. (2000); Zen et al. (2014).A solution of 4-thiomorpholino-3-formyl coumarin (1 mmol), dmethyl acetylenedicarboxylate (1 mmol), t-butyl isocyanide (1 mmol) were refluxed at 80°C for 3h. The volatiles were removed under reduced pressure. The crude reaction mixture was subjected to
using EtOAc/Hexane mobile phase. The title compound was isolated as yellow color solid with 80% yield. Yellow prisms were obtained by vapour diffusion method at room temperature, i.e., hexane vapour was allowed to diffuse into an EtOAc solution of 4-thiomorpholino-3-(2-N-t-butylamino-3,4-dimethylcarboxylate-5-furyl) 2H-1-benzopyran-2-one at room temperature.mp 107-109 °C; IR; νmax(KBr) 3288, 1732, 1728, 1667, 1658, 1618, 1418, 1240, 1041 cm-1; δH (500 MHz CDCl3) 7.69 (1 H, d), 7.52 (1 H, t), 7.28-7.33 (2 H, dd), 7.05 (1 H, s), 3.78 (3 H, s), 3.75 (3 H, s), 3.39-3.48 (4 H, m), 2.77-2.81 (4 H, m), 1.44 (9 H, s); δC (125 MHz, CDCl3) 165.6, 163.9, 163.0, 161.2, 160.6, 153.4, 138.2, 132.4, 125.1, 123.7, 118.7, 118.1, 117.7, 103.6, 87.8, 53.2, 52.7, 51.8, 51.3, 28.0; LCMS: MH+, 501.
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: Mercury (Macrae et al., 2008); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).Fig. 1. Molecular configuration and atom-numbering scheme for the title compound with displacement ellipsoids drawn at the 50% probability level. Hydrogen atoms are omitted for clarity. | |
Fig. 2. Crystal packing diagram of the title compound. | |
Fig. 3. Chemical scheme of title compound with solvent molecule. In the cystal system the main molecule and solvent molecule was found in 1:0.5 ratio. | |
Fig. 4. Synthesis of title compound (I). |
C25H28N2O7S·0.5C4H8O2 | F(000) = 1152 |
Mr = 544.61 | Dx = 1.340 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 25410 reflections |
a = 14.3733 (17) Å | θ = 1.4–25.0° |
b = 16.1159 (19) Å | µ = 0.17 mm−1 |
c = 11.7019 (14) Å | T = 90 K |
β = 95.007 (1)° | Prism, yellow |
V = 2700.3 (6) Å3 | 0.50 × 0.40 × 0.25 mm |
Z = 4 |
Bruker APEXII diffractometer | 4757 independent reflections |
Radiation source: fine-focus sealed tube | 4316 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.022 |
Detector resolution: 8.333 pixels mm-1 | θmax = 25.0°, θmin = 1.4° |
ω scans | h = −17→17 |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | k = −19→19 |
Tmin = 0.853, Tmax = 0.958 | l = −13→13 |
25410 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.032 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.086 | H-atom parameters constrained |
S = 1.02 | w = 1/[σ2(Fo2) + (0.040P)2 + 1.5222P] where P = (Fo2 + 2Fc2)/3 |
4757 reflections | (Δ/σ)max < 0.001 |
375 parameters | Δρmax = 0.26 e Å−3 |
30 restraints | Δρmin = −0.23 e Å−3 |
C25H28N2O7S·0.5C4H8O2 | V = 2700.3 (6) Å3 |
Mr = 544.61 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 14.3733 (17) Å | µ = 0.17 mm−1 |
b = 16.1159 (19) Å | T = 90 K |
c = 11.7019 (14) Å | 0.50 × 0.40 × 0.25 mm |
β = 95.007 (1)° |
Bruker APEXII diffractometer | 4757 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 4316 reflections with I > 2σ(I) |
Tmin = 0.853, Tmax = 0.958 | Rint = 0.022 |
25410 measured reflections |
R[F2 > 2σ(F2)] = 0.032 | 30 restraints |
wR(F2) = 0.086 | H-atom parameters constrained |
S = 1.02 | Δρmax = 0.26 e Å−3 |
4757 reflections | Δρmin = −0.23 e Å−3 |
375 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
C1 | 0.99995 (10) | 0.03172 (9) | 0.34623 (12) | 0.0231 (3) | |
C2 | 1.08898 (11) | 0.03216 (10) | 0.40315 (13) | 0.0282 (3) | |
H1 | 1.1151 | 0.0815 | 0.4321 | 0.034* | |
C3 | 1.13819 (11) | −0.04082 (11) | 0.41634 (14) | 0.0316 (4) | |
H2 | 1.197 | −0.0413 | 0.4563 | 0.038* | |
C4 | 1.09998 (11) | −0.11405 (11) | 0.36986 (14) | 0.0310 (4) | |
H3 | 1.1343 | −0.163 | 0.3759 | 0.037* | |
C5 | 1.01118 (10) | −0.11389 (10) | 0.31490 (13) | 0.0257 (3) | |
H4 | 0.9864 | −0.1631 | 0.2837 | 0.031* | |
C6 | 0.95710 (10) | −0.04105 (9) | 0.30487 (12) | 0.0208 (3) | |
C7 | 0.86234 (9) | −0.03596 (9) | 0.24765 (11) | 0.0190 (3) | |
C8 | 0.82094 (10) | 0.04097 (9) | 0.23612 (12) | 0.0199 (3) | |
C9 | 0.87117 (10) | 0.11639 (9) | 0.27233 (13) | 0.0239 (3) | |
C10 | 0.81001 (10) | −0.18053 (9) | 0.27629 (12) | 0.0215 (3) | |
H5 | 0.7459 | −0.1825 | 0.2962 | 0.026* | |
H6 | 0.8502 | −0.1745 | 0.3468 | 0.026* | |
C11 | 0.83315 (11) | −0.26140 (9) | 0.21796 (12) | 0.0242 (3) | |
H7 | 0.8264 | −0.3073 | 0.2703 | 0.029* | |
H8 | 0.8976 | −0.2601 | 0.1993 | 0.029* | |
C12 | 0.77517 (10) | −0.17887 (9) | 0.02143 (12) | 0.0238 (3) | |
H10 | 0.8391 | −0.1757 | 0.0011 | 0.029* | |
H9 | 0.7342 | −0.1748 | −0.0488 | 0.029* | |
C13 | 0.75641 (10) | −0.10617 (9) | 0.09892 (12) | 0.0217 (3) | |
H11 | 0.7635 | −0.0545 | 0.0581 | 0.026* | |
H12 | 0.6928 | −0.1092 | 0.1205 | 0.026* | |
C14 | 0.72271 (10) | 0.05441 (8) | 0.19528 (12) | 0.0201 (3) | |
C15 | 0.64058 (9) | 0.03168 (8) | 0.23338 (12) | 0.0185 (3) | |
C16 | 0.56676 (10) | 0.06269 (9) | 0.15304 (12) | 0.0194 (3) | |
C17 | 0.61162 (10) | 0.10511 (9) | 0.07106 (12) | 0.0214 (3) | |
C18 | 0.62518 (11) | 0.20817 (9) | −0.09030 (12) | 0.0243 (3) | |
C19 | 0.68655 (12) | 0.26826 (10) | −0.01648 (14) | 0.0323 (4) | |
H14 | 0.6495 | 0.296 | 0.0363 | 0.048* | |
H16 | 0.7128 | 0.3086 | −0.0648 | 0.048* | |
H15 | 0.736 | 0.2381 | 0.0255 | 0.048* | |
C20 | 0.54811 (12) | 0.25574 (10) | −0.16032 (14) | 0.0320 (4) | |
H17 | 0.5063 | 0.2172 | −0.2007 | 0.048* | |
H18 | 0.5754 | 0.2911 | −0.2144 | 0.048* | |
H19 | 0.5142 | 0.2889 | −0.1099 | 0.048* | |
C21 | 0.68273 (12) | 0.15921 (10) | −0.17061 (14) | 0.0323 (4) | |
H20 | 0.727 | 0.1249 | −0.1262 | 0.048* | |
H22 | 0.7154 | 0.197 | −0.2163 | 0.048* | |
H21 | 0.642 | 0.1249 | −0.2198 | 0.048* | |
C22 | 0.46747 (10) | 0.06935 (9) | 0.16008 (12) | 0.0204 (3) | |
C23 | 0.34095 (10) | 0.05062 (10) | 0.27252 (14) | 0.0297 (4) | |
H23 | 0.3276 | 0.1089 | 0.2747 | 0.045* | |
H24 | 0.3263 | 0.0253 | 0.343 | 0.045* | |
H25 | 0.3039 | 0.0256 | 0.2095 | 0.045* | |
C24 | 0.62849 (9) | −0.01445 (9) | 0.34073 (12) | 0.0200 (3) | |
C25 | 0.55129 (12) | −0.12568 (10) | 0.42109 (13) | 0.0298 (4) | |
H26 | 0.605 | −0.1357 | 0.4739 | 0.045* | |
H27 | 0.522 | −0.1775 | 0.3994 | 0.045* | |
H28 | 0.5078 | −0.0912 | 0.457 | 0.045* | |
C1S | 1.0683 (9) | −0.1031 (8) | 1.0236 (11) | 0.059 (3) | 0.5 |
H1SA | 1.1073 | −0.0784 | 1.0852 | 0.088* | 0.5 |
H1SB | 1.1057 | −0.1181 | 0.9628 | 0.088* | 0.5 |
H1SC | 1.0388 | −0.1517 | 1.0511 | 0.088* | 0.5 |
C2S | 0.994 (2) | −0.041 (2) | 0.979 (2) | 0.0624 (17) | 0.5 |
C3S | 0.9217 (9) | 0.0898 (7) | 0.9635 (11) | 0.0506 (17) | 0.5 |
H3SA | 0.8679 | 0.0739 | 1.0031 | 0.061* | 0.5 |
H3SB | 0.9073 | 0.0815 | 0.8817 | 0.061* | 0.5 |
C4S | 0.9519 (2) | 0.1897 (2) | 0.9924 (3) | 0.0399 (9) | 0.5 |
H4SA | 0.9024 | 0.2257 | 0.9627 | 0.06* | 0.5 |
H4SB | 1.0079 | 0.2028 | 0.9569 | 0.06* | 0.5 |
H4SC | 0.9627 | 0.1971 | 1.0738 | 0.06* | 0.5 |
N1 | 0.82204 (8) | −0.10814 (7) | 0.20229 (10) | 0.0197 (3) | |
N2 | 0.57584 (9) | 0.15043 (8) | −0.01773 (11) | 0.0286 (3) | |
H13 | 0.5167 | 0.1455 | −0.0349 | 0.034* | |
O1 | 0.95818 (7) | 0.10811 (6) | 0.32980 (9) | 0.0263 (2) | |
O2 | 0.84156 (8) | 0.18618 (7) | 0.25827 (10) | 0.0324 (3) | |
O3 | 0.70539 (7) | 0.09935 (6) | 0.09266 (8) | 0.0223 (2) | |
O4 | 0.41429 (7) | 0.10217 (7) | 0.08665 (9) | 0.0299 (3) | |
O5 | 0.43880 (7) | 0.03856 (6) | 0.25799 (8) | 0.0226 (2) | |
O6 | 0.65724 (8) | 0.00853 (8) | 0.43480 (9) | 0.0370 (3) | |
O7 | 0.57991 (7) | −0.08439 (6) | 0.32009 (8) | 0.0235 (2) | |
O1S | 0.9264 (3) | −0.0628 (3) | 0.9137 (4) | 0.1025 (13) | 0.5 |
O2S | 1.0034 (13) | 0.0428 (14) | 1.0052 (12) | 0.0550 (15) | 0.5 |
S1 | 0.75716 (3) | −0.27772 (2) | 0.08816 (3) | 0.02791 (11) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0205 (7) | 0.0277 (8) | 0.0213 (7) | −0.0025 (6) | 0.0037 (6) | 0.0008 (6) |
C2 | 0.0218 (8) | 0.0373 (9) | 0.0252 (8) | −0.0098 (7) | −0.0001 (6) | −0.0009 (7) |
C3 | 0.0166 (7) | 0.0500 (10) | 0.0272 (8) | −0.0029 (7) | −0.0034 (6) | 0.0055 (7) |
C4 | 0.0216 (8) | 0.0390 (9) | 0.0317 (9) | 0.0058 (7) | −0.0020 (6) | 0.0040 (7) |
C5 | 0.0219 (7) | 0.0290 (8) | 0.0256 (8) | 0.0008 (6) | −0.0010 (6) | 0.0000 (6) |
C6 | 0.0177 (7) | 0.0277 (8) | 0.0171 (7) | −0.0014 (6) | 0.0015 (5) | 0.0016 (6) |
C7 | 0.0177 (7) | 0.0236 (7) | 0.0159 (7) | −0.0013 (6) | 0.0026 (5) | 0.0023 (5) |
C8 | 0.0178 (7) | 0.0231 (7) | 0.0191 (7) | −0.0012 (6) | 0.0031 (5) | 0.0015 (6) |
C9 | 0.0219 (7) | 0.0257 (8) | 0.0245 (8) | −0.0017 (6) | 0.0043 (6) | 0.0002 (6) |
C10 | 0.0219 (7) | 0.0227 (7) | 0.0194 (7) | −0.0020 (6) | −0.0001 (6) | 0.0041 (6) |
C11 | 0.0270 (8) | 0.0221 (7) | 0.0229 (7) | −0.0015 (6) | −0.0020 (6) | 0.0043 (6) |
C12 | 0.0228 (7) | 0.0283 (8) | 0.0194 (7) | 0.0022 (6) | −0.0035 (6) | 0.0008 (6) |
C13 | 0.0210 (7) | 0.0228 (7) | 0.0202 (7) | 0.0006 (6) | −0.0046 (6) | 0.0018 (6) |
C14 | 0.0224 (7) | 0.0175 (7) | 0.0200 (7) | 0.0018 (6) | 0.0002 (6) | 0.0034 (5) |
C15 | 0.0191 (7) | 0.0168 (7) | 0.0194 (7) | 0.0016 (5) | 0.0004 (5) | −0.0004 (5) |
C16 | 0.0189 (7) | 0.0200 (7) | 0.0187 (7) | 0.0018 (5) | −0.0008 (5) | 0.0010 (5) |
C17 | 0.0195 (7) | 0.0226 (7) | 0.0218 (7) | 0.0028 (6) | −0.0004 (6) | 0.0019 (6) |
C18 | 0.0309 (8) | 0.0213 (7) | 0.0209 (7) | 0.0007 (6) | 0.0030 (6) | 0.0039 (6) |
C19 | 0.0402 (9) | 0.0246 (8) | 0.0314 (9) | −0.0006 (7) | −0.0010 (7) | 0.0005 (7) |
C20 | 0.0425 (10) | 0.0277 (8) | 0.0251 (8) | 0.0061 (7) | −0.0007 (7) | 0.0049 (6) |
C21 | 0.0378 (9) | 0.0299 (8) | 0.0300 (8) | 0.0010 (7) | 0.0075 (7) | −0.0007 (7) |
C22 | 0.0203 (7) | 0.0194 (7) | 0.0209 (7) | 0.0005 (6) | −0.0003 (6) | −0.0014 (6) |
C23 | 0.0207 (8) | 0.0340 (9) | 0.0353 (9) | 0.0037 (6) | 0.0082 (6) | 0.0009 (7) |
C24 | 0.0148 (6) | 0.0229 (7) | 0.0219 (7) | 0.0010 (5) | −0.0006 (5) | 0.0021 (6) |
C25 | 0.0328 (9) | 0.0313 (8) | 0.0249 (8) | −0.0065 (7) | 0.0008 (6) | 0.0099 (7) |
C1S | 0.036 (4) | 0.090 (5) | 0.055 (4) | −0.004 (3) | 0.028 (3) | −0.002 (3) |
C2S | 0.049 (3) | 0.082 (3) | 0.060 (4) | −0.003 (2) | 0.026 (3) | 0.013 (3) |
C3S | 0.036 (3) | 0.070 (3) | 0.047 (3) | 0.013 (3) | 0.007 (2) | 0.020 (3) |
C4S | 0.0258 (17) | 0.052 (2) | 0.044 (2) | 0.0120 (15) | 0.0153 (15) | 0.0192 (17) |
N1 | 0.0199 (6) | 0.0199 (6) | 0.0185 (6) | −0.0012 (5) | −0.0039 (5) | 0.0028 (5) |
N2 | 0.0200 (6) | 0.0372 (8) | 0.0280 (7) | 0.0004 (5) | −0.0007 (5) | 0.0136 (6) |
O1 | 0.0223 (5) | 0.0244 (5) | 0.0319 (6) | −0.0049 (4) | 0.0000 (4) | −0.0021 (4) |
O2 | 0.0326 (6) | 0.0207 (6) | 0.0437 (7) | 0.0006 (5) | 0.0019 (5) | −0.0024 (5) |
O3 | 0.0185 (5) | 0.0251 (5) | 0.0232 (5) | 0.0016 (4) | 0.0023 (4) | 0.0073 (4) |
O4 | 0.0204 (5) | 0.0408 (7) | 0.0277 (6) | 0.0047 (5) | −0.0027 (4) | 0.0086 (5) |
O5 | 0.0175 (5) | 0.0271 (5) | 0.0236 (5) | 0.0021 (4) | 0.0035 (4) | 0.0028 (4) |
O6 | 0.0417 (7) | 0.0463 (7) | 0.0214 (6) | −0.0190 (6) | −0.0069 (5) | 0.0048 (5) |
O7 | 0.0284 (5) | 0.0218 (5) | 0.0202 (5) | −0.0045 (4) | 0.0014 (4) | 0.0039 (4) |
O1S | 0.104 (3) | 0.113 (3) | 0.094 (3) | −0.019 (3) | 0.029 (2) | 0.021 (3) |
O2S | 0.0419 (18) | 0.0739 (19) | 0.052 (4) | 0.0088 (17) | 0.017 (3) | 0.014 (3) |
S1 | 0.0304 (2) | 0.0225 (2) | 0.0294 (2) | −0.00151 (15) | −0.00565 (16) | −0.00288 (15) |
C1—O1 | 1.3759 (18) | C18—N2 | 1.4817 (19) |
C1—C2 | 1.390 (2) | C18—C21 | 1.525 (2) |
C1—C6 | 1.392 (2) | C18—C20 | 1.526 (2) |
C2—C3 | 1.374 (2) | C18—C19 | 1.526 (2) |
C2—H1 | 0.93 | C19—H14 | 0.96 |
C3—C4 | 1.392 (2) | C19—H16 | 0.96 |
C3—H2 | 0.93 | C19—H15 | 0.96 |
C4—C5 | 1.378 (2) | C20—H17 | 0.96 |
C4—H3 | 0.93 | C20—H18 | 0.96 |
C5—C6 | 1.407 (2) | C20—H19 | 0.96 |
C5—H4 | 0.93 | C21—H20 | 0.96 |
C6—C7 | 1.4667 (19) | C21—H22 | 0.96 |
C7—C8 | 1.377 (2) | C21—H21 | 0.96 |
C7—N1 | 1.3844 (18) | C22—O4 | 1.2197 (17) |
C8—C9 | 1.458 (2) | C22—O5 | 1.3457 (17) |
C8—C14 | 1.467 (2) | C23—O5 | 1.4444 (17) |
C9—O2 | 1.2088 (19) | C23—H23 | 0.96 |
C9—O1 | 1.3737 (18) | C23—H24 | 0.96 |
C10—N1 | 1.4721 (18) | C23—H25 | 0.96 |
C10—C11 | 1.521 (2) | C24—O6 | 1.2001 (18) |
C10—H5 | 0.97 | C24—O7 | 1.3367 (17) |
C10—H6 | 0.97 | C25—O7 | 1.4469 (18) |
C11—S1 | 1.8110 (15) | C25—H26 | 0.96 |
C11—H7 | 0.97 | C25—H27 | 0.96 |
C11—H8 | 0.97 | C25—H28 | 0.96 |
C12—C13 | 1.520 (2) | C1S—C2S | 1.51 (3) |
C12—S1 | 1.8027 (15) | C1S—H1SA | 0.96 |
C12—H10 | 0.97 | C1S—H1SB | 0.96 |
C12—H9 | 0.97 | C1S—H1SC | 0.96 |
C13—N1 | 1.4680 (17) | C2S—O1S | 1.23 (3) |
C13—H11 | 0.97 | C2S—O2S | 1.396 (16) |
C13—H12 | 0.97 | C3S—O2S | 1.446 (19) |
C14—C15 | 1.348 (2) | C3S—C4S | 1.693 (13) |
C14—O3 | 1.4058 (17) | C3S—H3SA | 0.97 |
C15—C16 | 1.4440 (19) | C3S—H3SB | 0.97 |
C15—C24 | 1.4830 (19) | C4S—H4SA | 0.96 |
C16—C17 | 1.383 (2) | C4S—H4SB | 0.96 |
C16—C22 | 1.441 (2) | C4S—H4SC | 0.96 |
C17—N2 | 1.3357 (19) | N2—H13 | 0.86 |
C17—O3 | 1.3527 (17) | ||
O1—C1—C2 | 115.75 (13) | C18—C19—H14 | 109.5 |
O1—C1—C6 | 122.08 (13) | C18—C19—H16 | 109.5 |
C2—C1—C6 | 122.13 (14) | H14—C19—H16 | 109.5 |
C3—C2—C1 | 119.52 (15) | C18—C19—H15 | 109.5 |
C3—C2—H1 | 120.2 | H14—C19—H15 | 109.5 |
C1—C2—H1 | 120.2 | H16—C19—H15 | 109.5 |
C2—C3—C4 | 120.00 (14) | C18—C20—H17 | 109.5 |
C2—C3—H2 | 120.0 | C18—C20—H18 | 109.5 |
C4—C3—H2 | 120.0 | H17—C20—H18 | 109.5 |
C5—C4—C3 | 119.90 (15) | C18—C20—H19 | 109.5 |
C5—C4—H3 | 120.1 | H17—C20—H19 | 109.5 |
C3—C4—H3 | 120.1 | H18—C20—H19 | 109.5 |
C4—C5—C6 | 121.52 (15) | C18—C21—H20 | 109.5 |
C4—C5—H4 | 119.2 | C18—C21—H22 | 109.5 |
C6—C5—H4 | 119.2 | H20—C21—H22 | 109.5 |
C1—C6—C5 | 116.71 (13) | C18—C21—H21 | 109.5 |
C1—C6—C7 | 118.48 (13) | H20—C21—H21 | 109.5 |
C5—C6—C7 | 124.67 (13) | H22—C21—H21 | 109.5 |
C8—C7—N1 | 123.80 (12) | O4—C22—O5 | 122.69 (13) |
C8—C7—C6 | 118.12 (13) | O4—C22—C16 | 123.71 (13) |
N1—C7—C6 | 117.96 (12) | O5—C22—C16 | 113.56 (12) |
C7—C8—C9 | 121.56 (13) | O5—C23—H23 | 109.5 |
C7—C8—C14 | 124.09 (13) | O5—C23—H24 | 109.5 |
C9—C8—C14 | 114.21 (12) | H23—C23—H24 | 109.5 |
O2—C9—O1 | 116.85 (13) | O5—C23—H25 | 109.5 |
O2—C9—C8 | 125.21 (14) | H23—C23—H25 | 109.5 |
O1—C9—C8 | 117.91 (12) | H24—C23—H25 | 109.5 |
N1—C10—C11 | 111.94 (11) | O6—C24—O7 | 123.96 (13) |
N1—C10—H5 | 109.2 | O6—C24—C15 | 124.46 (13) |
C11—C10—H5 | 109.2 | O7—C24—C15 | 111.57 (12) |
N1—C10—H6 | 109.2 | O7—C25—H26 | 109.5 |
C11—C10—H6 | 109.2 | O7—C25—H27 | 109.5 |
H5—C10—H6 | 107.9 | H26—C25—H27 | 109.5 |
C10—C11—S1 | 111.17 (10) | O7—C25—H28 | 109.5 |
C10—C11—H7 | 109.4 | H26—C25—H28 | 109.5 |
S1—C11—H7 | 109.4 | H27—C25—H28 | 109.5 |
C10—C11—H8 | 109.4 | C2S—C1S—H1SA | 109.5 |
S1—C11—H8 | 109.4 | C2S—C1S—H1SB | 109.5 |
H7—C11—H8 | 108.0 | H1SA—C1S—H1SB | 109.5 |
C13—C12—S1 | 112.52 (10) | C2S—C1S—H1SC | 109.5 |
C13—C12—H10 | 109.1 | H1SA—C1S—H1SC | 109.5 |
S1—C12—H10 | 109.1 | H1SB—C1S—H1SC | 109.5 |
C13—C12—H9 | 109.1 | O1S—C2S—O2S | 117 (2) |
S1—C12—H9 | 109.1 | O1S—C2S—C1S | 122 (3) |
H10—C12—H9 | 107.8 | O2S—C2S—C1S | 120.8 (16) |
N1—C13—C12 | 109.89 (11) | O2S—C3S—C4S | 104.1 (11) |
N1—C13—H11 | 109.7 | O2S—C3S—H3SA | 110.9 |
C12—C13—H11 | 109.7 | C4S—C3S—H3SA | 110.9 |
N1—C13—H12 | 109.7 | O2S—C3S—H3SB | 110.9 |
C12—C13—H12 | 109.7 | C4S—C3S—H3SB | 110.9 |
H11—C13—H12 | 108.2 | H3SA—C3S—H3SB | 109.0 |
C15—C14—O3 | 109.12 (12) | C3S—C4S—H4SA | 109.5 |
C15—C14—C8 | 134.25 (13) | C3S—C4S—H4SB | 109.5 |
O3—C14—C8 | 116.62 (12) | H4SA—C4S—H4SB | 109.5 |
C14—C15—C16 | 107.78 (12) | C3S—C4S—H4SC | 109.5 |
C14—C15—C24 | 125.94 (13) | H4SA—C4S—H4SC | 109.5 |
C16—C15—C24 | 126.25 (12) | H4SB—C4S—H4SC | 109.5 |
C17—C16—C22 | 121.81 (13) | C7—N1—C13 | 121.00 (11) |
C17—C16—C15 | 105.20 (12) | C7—N1—C10 | 120.47 (11) |
C22—C16—C15 | 131.59 (13) | C13—N1—C10 | 113.69 (11) |
N2—C17—O3 | 119.51 (13) | C17—N2—C18 | 128.18 (13) |
N2—C17—C16 | 129.71 (13) | C17—N2—H13 | 115.9 |
O3—C17—C16 | 110.72 (12) | C18—N2—H13 | 115.9 |
N2—C18—C21 | 109.92 (13) | C9—O1—C1 | 121.51 (11) |
N2—C18—C20 | 105.19 (12) | C17—O3—C14 | 107.11 (11) |
C21—C18—C20 | 109.66 (13) | C22—O5—C23 | 115.10 (11) |
N2—C18—C19 | 110.86 (12) | C24—O7—C25 | 114.92 (11) |
C21—C18—C19 | 111.06 (13) | C2S—O2S—C3S | 112.1 (10) |
C20—C18—C19 | 109.99 (13) | C12—S1—C11 | 97.82 (7) |
O1—C1—C2—C3 | −175.67 (13) | C15—C16—C17—O3 | 2.48 (16) |
C6—C1—C2—C3 | 2.1 (2) | C17—C16—C22—O4 | 10.8 (2) |
C1—C2—C3—C4 | 1.9 (2) | C15—C16—C22—O4 | 175.22 (15) |
C2—C3—C4—C5 | −2.8 (2) | C17—C16—C22—O5 | −166.81 (13) |
C3—C4—C5—C6 | −0.4 (2) | C15—C16—C22—O5 | −2.4 (2) |
O1—C1—C6—C5 | 172.56 (13) | C14—C15—C24—O6 | 58.0 (2) |
C2—C1—C6—C5 | −5.1 (2) | C16—C15—C24—O6 | −119.79 (17) |
O1—C1—C6—C7 | −3.4 (2) | C14—C15—C24—O7 | −123.19 (15) |
C2—C1—C6—C7 | 178.92 (13) | C16—C15—C24—O7 | 59.05 (18) |
C4—C5—C6—C1 | 4.2 (2) | C8—C7—N1—C13 | 28.2 (2) |
C4—C5—C6—C7 | 179.92 (14) | C6—C7—N1—C13 | −147.75 (13) |
C1—C6—C7—C8 | 0.98 (19) | C8—C7—N1—C10 | −125.64 (15) |
C5—C6—C7—C8 | −174.66 (13) | C6—C7—N1—C10 | 58.43 (17) |
C1—C6—C7—N1 | 177.15 (12) | C12—C13—N1—C7 | 139.30 (13) |
C5—C6—C7—N1 | 1.5 (2) | C12—C13—N1—C10 | −65.24 (15) |
N1—C7—C8—C9 | −171.86 (13) | C11—C10—N1—C7 | −138.82 (13) |
C6—C7—C8—C9 | 4.1 (2) | C11—C10—N1—C13 | 65.57 (15) |
N1—C7—C8—C14 | 12.7 (2) | O3—C17—N2—C18 | −10.2 (2) |
C6—C7—C8—C14 | −171.36 (12) | C16—C17—N2—C18 | 166.87 (15) |
C7—C8—C9—O2 | 175.03 (15) | C21—C18—N2—C17 | 73.7 (2) |
C14—C8—C9—O2 | −9.1 (2) | C20—C18—N2—C17 | −168.28 (15) |
C7—C8—C9—O1 | −6.8 (2) | C19—C18—N2—C17 | −49.4 (2) |
C14—C8—C9—O1 | 169.05 (12) | O2—C9—O1—C1 | −177.30 (13) |
N1—C10—C11—S1 | −60.96 (14) | C8—C9—O1—C1 | 4.37 (19) |
S1—C12—C13—N1 | 62.57 (14) | C2—C1—O1—C9 | 178.43 (13) |
C7—C8—C14—C15 | 61.3 (2) | C6—C1—O1—C9 | 0.6 (2) |
C9—C8—C14—C15 | −114.41 (18) | N2—C17—O3—C14 | 175.06 (13) |
C7—C8—C14—O3 | −117.28 (15) | C16—C17—O3—C14 | −2.50 (16) |
C9—C8—C14—O3 | 66.99 (16) | C15—C14—O3—C17 | 1.49 (15) |
O3—C14—C15—C16 | 0.03 (16) | C8—C14—O3—C17 | −179.57 (12) |
C8—C14—C15—C16 | −178.64 (15) | O4—C22—O5—C23 | −2.8 (2) |
O3—C14—C15—C24 | −178.07 (12) | C16—C22—O5—C23 | 174.87 (12) |
C8—C14—C15—C24 | 3.3 (3) | O6—C24—O7—C25 | 9.0 (2) |
C14—C15—C16—C17 | −1.50 (16) | C15—C24—O7—C25 | −169.88 (12) |
C24—C15—C16—C17 | 176.60 (13) | O1S—C2S—O2S—C3S | 9.0 (14) |
C14—C15—C16—C22 | −167.79 (15) | C1S—C2S—O2S—C3S | −175 (2) |
C24—C15—C16—C22 | 10.3 (2) | C4S—C3S—O2S—C2S | −174.6 (5) |
C22—C16—C17—N2 | −6.8 (2) | C13—C12—S1—C11 | −53.91 (11) |
C15—C16—C17—N2 | −174.76 (15) | C10—C11—S1—C12 | 52.18 (11) |
C22—C16—C17—O3 | 170.45 (13) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H13···O4 | 0.86 | 2.25 | 2.8255 (17) | 125 |
C3—H2···O6i | 0.93 | 2.41 | 3.325 (2) | 167 |
C12—H9···O4ii | 0.97 | 2.44 | 3.1531 (18) | 130 |
C12—H10···O1Siii | 0.97 | 2.48 | 3.208 (5) | 132 |
C19—H15···O3 | 0.96 | 2.42 | 3.0090 (19) | 119 |
C23—H23···S1iv | 0.96 | 2.78 | 3.5639 (17) | 139 |
C25—H26···S1v | 0.96 | 2.83 | 3.7406 (18) | 159 |
Symmetry codes: (i) −x+2, −y, −z+1; (ii) −x+1, −y, −z; (iii) x, y, z−1; (iv) −x+1, y+1/2, −z+1/2; (v) x, −y−1/2, z+1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H13···O4 | 0.86 | 2.25 | 2.8255 (17) | 125 |
C3—H2···O6i | 0.93 | 2.41 | 3.325 (2) | 167 |
C12—H9···O4ii | 0.97 | 2.44 | 3.1531 (18) | 130 |
C12—H10···O1Siii | 0.97 | 2.48 | 3.208 (5) | 132 |
C19—H15···O3 | 0.96 | 2.42 | 3.0090 (19) | 119 |
C23—H23···S1iv | 0.96 | 2.78 | 3.5639 (17) | 139 |
C25—H26···S1v | 0.96 | 2.83 | 3.7406 (18) | 159 |
Symmetry codes: (i) −x+2, −y, −z+1; (ii) −x+1, −y, −z; (iii) x, y, z−1; (iv) −x+1, y+1/2, −z+1/2; (v) x, −y−1/2, z+1/2. |
Acknowledgements
We are grateful to the Center for Instrumental Analysis, Kyushu Institute of Technology (KITCIA) for the X-ray analysis. This research was supported financially by JSPS KAKENH grant No. 15 K05611.
References
Arango, V., Robledo, S., Séon-Méniel, B., Figadère, B., Cardona, W., Sáez, J. & Otálvaro, F. (2010). J. Nat. Prod. 73, 1012–1014. Web of Science CrossRef CAS PubMed Google Scholar
Bruker (2009). APEX2, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Chodankar, N. K. (1985). Dyes Pigm. 6, 331–340. CrossRef CAS Web of Science Google Scholar
Khan, I. A. & Kulkarni, M. V. (1999). Indian. J. Chem. Sect. B, 38, 491–494. Google Scholar
Kitamura, N., Kohtani, S. & Nakagaki, R. (2005). J. Photochem. Photobiol. Photochem. Rev. 6, 168–185. Web of Science CrossRef CAS Google Scholar
Luo, X., He, W., Yin, H., Li, Q., Liu, Q., Huang, Y. & Zhang, S. (2012). Molecules, 17, 6944–6952. Web of Science CrossRef CAS PubMed Google Scholar
Macrae, C. F., Bruno, I. J., Chisholm, J. A., Edgington, P. R., McCabe, P., Pidcock, E., Rodriguez-Monge, L., Taylor, R., van de Streek, J. & Wood, P. A. (2008). J. Appl. Cryst. 41, 466–470. Web of Science CSD CrossRef CAS IUCr Journals Google Scholar
Sawa, M., Hsu, T. L., Itoh, T., Sugiyama, M., Hanson, S. R., Vogt, P. K. & Wong, C. H. (2006). Proc. Natl Acad. Sci. USA, 103, 12371–12376. Web of Science CrossRef PubMed CAS Google Scholar
Schiedel, M. S., Briehn, C. A. & Bäuerle, P. (2001). Angew. Chem. Int. Ed. 40, 4677–4680. CrossRef CAS Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Udaya Kumari, T., David Krupadanam, G. L. & Srimannarayana, G. (2000). Indian. J. Chem. Sect. B, 39, 62–64. Google Scholar
Zen, A. Z., Aylott, J. W. & Chan, W. C. (2014). Tetrahedron Lett. 55, 5521–5524. Google Scholar
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