research communications
S*,2R*)-7-benzyloxy-2-methyl-3-tosyl-2,3,4,5-tetrahydro-1H-3-benzazepin-1-ol: elucidation of the of potent allosteric GluN2B selective NMDA receptor antagonists
of (1aInstitut für Pharmazeutische und Medizinische Chemie der Universität Münster, Corrensstrasse 48, D-48149 Münster, Germany, bOrganisch-chemisches Institut der Westfälischen Wilhelms-Universität Münster, Corrensstr. 40, D-48149-Münster, Germany, and cCells-in-Motion Cluster of Excellence (EXC 1003 – CiM), Universität Münster, Germany
*Correspondence e-mail: wuensch@uni-muenster.de
In the title compound, C25H27NO4S, which crystallized as a racemate, the of the adjacent OH and CH3 groups on the azepine ring is trans. The seven-membered azepin ring has a chair-like conformation. The planar aromatic rings of the benzyl and tosylate moiety are inclined to the planar 3-benzazepine ring by 78.39 (15) and 77.03 (14)°, respectively, and to each another by 13.82 (15)°. In the crystal, molecules are linked via O—H⋯O and C—H⋯O hydrogen bonds, forming double-stranded chains along the a-axis direction. The chains are linked via C—H⋯π interactions, forming a three-dimensional architecture.
Keywords: crystal structure; NMDA receptor antagonists; GluN2B antagonists; ifenprodil analogs; tetrahydro-3-benzazepines; relative configuration; conformational restriction; hydrogen bonding.
CCDC reference: 1472947
1. Chemical context
Inhibition of overactive N-methyl-D-aspartate (NMDA) receptors represents a promising strategy for the treatment of acute (e.g. stroke, epilepsy, traumatic brain injury) and chronic neuronal disorders (e.g. neuropathic pain, depression, Alzheimer's and Parkinson's disease) (Bräuner-Osborne et al., 2000; Kew & Kemp, 2005; Paoletti et al., 2013; Wu & Zhou, 2009). The NMDA receptor consists of four proteins (heterotetramer), which form a cation channel allowing the penetration of Ca2+ and Na+ ions into the neuron (Furukawa et al., 2005). In particular, NMDA receptors containing the GluN2B subunit are an attractive target for the development of innovative drugs, since the expression of the GluN2B subunit is limited to only a few regions of the central nervous system, including cortex, striatum and hippocampus (Borza & Domány, 2006; Layton et al., 2006; Mony et al., 2009). Moreover, the GluN2B subunit can be addressed selectively by ligands interacting with the so-called ifenprodil binding site, which is formed at the interface between GluN2B and GluN1 subunits (Karakas et al., 2011; Paoletti et al., 2013).
The 2-piperidino-1-phenylpropan-1-ol derivative ifenprodil (Paoletti et al., 2013; Williams, 2001) (Fig. 1) represents the first ligand interacting with this binding site at the NMDA receptor. As a result of its poor selectivity and low bioavailability, ifenprodil has not been developed as a drug for clinical use. In order to improve the selectivity and metabolic stability, the flexible β-aminoalcohol of ifenprodil has been incorporated into a rigid tetrahydro-3-benzazepine ring (Tewes et al., 2010a,b; Schepmann et al., 2010; Falck et al., 2014).
2. Elucidation of the relative configuration
For the synthesis of 3-benzazepine analogs of ifenprodil, we developed a chiral pool synthesis starting with (R)-alanine. In a five step synthesis (Fig. 1), the central intermediate ketone (R)-1 was prepared from (R)-alanine (Tewes et al., 2015).
The reduction of the ketone (R)-1 with NaBH4 led to the diastereomeric (S,R)-2 and (R,R)-3, which were further transformed into potent GluN2B antagonists by reductive removal of the tosyl group, alkylation with 1-chloro-4-phenylbutane and finally, hydrogenolytic cleavage of the benzyl ether. For example, the phenol (S,R)-4 displays very high affinity towards the ifenprodil binding site of the NMDA receptor (Ki = 26 nM) and, moreover, (S,R)-4 is able to reduce the glutamate- and glycine-induced cytotoxicity with an IC50 value of 9.0 nM (Tewes et al., 2015).
The diastereomeric S,R)-2 and (R,R)-3 were separated by flash and isolated in 50% and 23% yield, respectively. However, as a result of flexibility of the seven-membered tetrahydro-3-benzazepine ring, it was not possible to assign the of the methyl and hydroxy moiety. Therefore, the main diastereomer (1S,2R)-2 was crystallized and we report herein on its crystal structure.
(3. Structural commentary
The molecular structure of the title compound (1S,2R)-2 is illustrated in Fig. 2. Since the starting material was not enantiomerically pure, the compound crystallized as a racemate. However, the relative trans-configuration of the OH and CH3 groups in the 1- and 2-positions on the azepine ring is clearly shown, leading to a trans-configuration for compound (S*,R*)-2. The CH3 and the OH groups adopt an axial orientation in the seven-membered azepine ring which has a chair conformation. The phenyl group of the benzyl moiety (C16–C21) and the phenyl group of the tosylate moiety (C25–C30) are inclined to the benzene ring of the 3-benzazepine ring (C6–C11) by 78.39 (15) and 77.03 (14)°, respectively, and to each another by 13.82 (15)°. In the azepine ring, the bonds between the N atom, N3, and its adjacent C atoms, C2 and C4 [1.483 (3) and 1.480 (3) Å, respectively] are naturally shorter than the corresponding C—C bonds [1.509 (4)–1.519 (4) Å]. The exocyclic N3—S22 bond is considerably longer at 1.622 (2) Å. The bond angles within the azepine ring are close to the tetrahedral angle [106.2 (2)–116.3 (2) °]. Fig. 2 also shows the tetrahedral geometry around the S atom, S22, of the sulfon-amide.
4. Supramolecular features
In the crystal, molecules are linked via O—H⋯O and C—H⋯O hydrogen bonds, forming double-stranded chains along the a-axis direction (Table 1 and Fig. 3). The chains are linked via C—H⋯π interactions (Table 1), forming a three-dimensional architecture.
5. Synthesis and crystallization
(1S,2R)-7-Benzyloxy-2-methyl-3-(4-tosyl)-2,3,4,5-tetrahydro-1H-3-benzazepin-1-ol [(S,R)-2] and (1R,2R)-7-benzyloxy-2-methyl-3-(4-tosyl)-2,3,4,5-tetrahydro-1H-3-benzazepin-1-ol [(R,R)-3]
Details of the synthesis of the title compound are illustrated in Fig. 1.
As described for the synthesis of (R,S)-2 and (S,S)-3 (Tewes et al. (2015), the ketone (R)-1 (5.20 g, 12.0 mmol) was reduced with NaBH4 (909 mg, 23.9 mmol) in CH3OH (125 ml).
(S,R)-2 (Rf = 0.29): Colourless solid, m.p. 417 K, yield 2.60 g (50%). Purity (HPLC): 98.1%, tR = 22.6 min. [α]D = +1.20 (c = 0.91, CH3OH, 2.1% ee). Spectroscopic data are given in Tewes et al. (2015).
(R,R)-3 (Rf = 0.44): Colourless solid, m.p. 425 K, yield 1.20 g (23%). Purity (HPLC): 95.6%, tR = 22.2 min. [α]D = +1.89 (c = 0.98, CH3OH, 8.5% ee). Spectroscopic data are given in Tewes et al. (2015).
Crystals of the title compound, suitable for X-ray
were obtained by recrystallization from EtOAc.6. details
Crystal data, data collection and structure . The OH and C-bound H atoms were included in calculated positions and treated as riding atoms: O—H = 0.83 Å, C—H = 0.94–0.99 Å with Uiso(H) = 1.5Ueq(O or C-methyl) and 1.2Ueq(C) for other H atoms.
details are summarized in Table 2
|
Supporting information
CCDC reference: 1472947
10.1107/S2056989016005855/su5286sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S2056989016005855/su5286Isup2.hkl
Supporting information file. DOI: 10.1107/S2056989016005855/su5286Isup3.cml
Inhibition of overactive N-methyl-D-aspartate (NMDA) receptors represents a promising strategy for the treatment of acute (e.g. stroke, epilepsy, traumatic brain injury) and chronic neuronal disorders (e.g. neuropathic pain, depression, Alzheimer's and Parkinson's disease) (Bräuner-Osborne et al., 2000; Kew & Kemp, 2005; Paoletti et al., 2013; Wu & Zhou, 2009). The NMDA receptor consists of four proteins (heterotetramer), which form a cation channel allowing the penetration of Ca2+ and Na+ ions into the neuron (Furukawa et al., 2005). In particular, NMDA receptors containing the GluN2B subunit are an attractive target for the development of innovative drugs, since the expression of the GluN2B subunit is limited to only a few regions of the central nervous system, including cortex, striatum and hippocampus (Borza & Domány, 2006; Layton et al., 2006; Mony et al., 2009). Moreover, the GluN2B subunit can be addressed selectively by ligands interacting with the so-called ifenprodil binding site, which is formed at the interface between GluN2B and GluN1 subunits (Karakas et al., 2011; Paoletti et al., 2013).
The 2-piperidino-1-phenylpropan-1-ol derivative ifenprodil (Paoletti et al., 2013; Williams, 2001) (Fig. 1) represents the first ligand interacting with this binding site at the NMDA receptor. As a result of its poor selectivity and low bioavailability, ifenprodil has not been developed as a drug for clinical use. In order to improve the selectivity and metabolic stability, the flexible β-aminoalcohol of ifenprodil has been incorporated into a rigid tetrahydro-3-benzazepine ring (Tewes et al., 2010a,b; Schepmann et al., 2010; Falck et al., 2014).
For the synthesis of 3-benzazepine analogs of ifenprodil, we developed a chiral pool synthesis starting with (R)-alanine. In a five step synthesis (Fig. 1), the central intermediate ketone (R)-1 was prepared from (R)-alanine (Tewes et al., 2015). Synthesis of GluN2B antagonists included the lead compound ifenprodil and the target compound (S,R)-4.
The reduction of the ketone (R)-1 with NaBH4 led to the diastereomeric
(S,R)-2 and (R,R)-3, which were further transformed into potent GluN2B antagonists by reductive removal of the tosyl group, alkylation with 1-chloro-4-phenylbutane and finally, hydrogenolytic cleavage of the benzyl ether. For example, the phenol (S,R)-4 displays very high affinity towards the ifenprodil binding site of the NMDA receptor (Ki = 26 nM) and, moreover, (S,R)-4 is able to reduce the glutamate- and glycine-induced cytotoxicity with an IC50 value of 9.0 nM (Tewes et al., 2015).The diastereomeric
(S,R)-2 and (R,R)-3 were separated by flash and isolated in 50% and 23% yield, respectively. However, as a result of flexibility of the seven-membered tetrahydro-3-benzazepine ring, it was not possible to assign the of the methyl and hydroxy moiety. Therefore, the main diastereomer (1S,2R-2) was crystallized and we report herein on its crystal structure.The molecular structure of the title compound (1S,2R-2) is illustrated in Fig. 2. Since the starting material was not enantiomerically pure, the compound crystallized as a racemate. However, the relative trans-configuration of the OH and CH3 groups in the 1- and 2-positions on the azepin ring is clearly shown, leading to a (1S,2R)-configuration for compound (S*,R*)-2. The CH3 and the OH groups adopt an axial orientation in the seven-membered azepine ring which has a chair conformation. The benzyl ring (C16–C21) and the tosylate ring (C25–C30) are inclined to the benzo ring (C6–C11) by 78.39 (15) and 77.03 (14)°, respectively, and to one another by 13.82 (15)°. In the azepine ring, the bonds between the N atom, N3, and its adjacent C atoms, C2 and C4 [1.483 (3) and 1.480 (3) Å, respectively] are naturally shorter than the corresponding C—C bonds [1.509 (4)–1.519 (4) Å]. The exocyclic N3—S22 bond is considerably longer at 1.622 (2) Å. The bond angles within the azepine ring are close to the tetrahedral angle [106.2 (2)–116.3 (2) °]. Fig. 2 also shows the tetrahedral geometry around the S atom, S22, of the sulfonamide.
In the crystal, molecules are linked via O—H···O and C—H···O hydrogen bonds, forming double-stranded chains along the a-axis direction (Table 1 and Fig. 3). The chains are linked via C—H···π interactions (Table 1), forming a three-dimensional architecture.
\ (1S,2R)-7-Benzyloxy-2-methyl-3-\ (4-tosyl)-2,3,4,5-tetrahydro-1H-3-benzazepin-1-ol [(S,R)-2] and (1R,2R)-7-benzyloxy-2-methyl-3-(4-\ tosyl)-2,3,4,5-tetrahydro-1H-3-benzazepin-1-ol [(R,R)-3]
Details of the synthesis of the title compound are illustrated in Fig. 1.
As described for the synthesis of (R,S)-2 and (S,S)-3 (Tewes et al. (2015), the ketone (R)-1 (5.20 g, 12.0 mmol) was reduced with NaBH4 (909 mg, 23.9 mmol) in CH3OH (125 ml).
(S,R)-2 (Rf = 0.29): Colourless solid, m.p. 417 K, yield 2.60 g (50%). Purity (HPLC): 98.1%, tR = 22.6 min. [α]D = +1.20 (c = 0.91, CH3OH, 2.1% ee). Spectroscopic data are given in Tewes et al. (2015).
(R,R)-3 (Rf = 0.44): Colourless solid, m.p. 425 K, yield 1.20 g (23%). Purity (HPLC): 95.6%, tR = 22.2 min. [α]D = +1.89 (c = 0.98, CH3OH, 8.5% ee). Spectroscopic data are given in Tewes et al. (2015).
Crystals of the title compound, suitable for X-ray
were obtained by ??????Inhibition of overactive N-methyl-D-aspartate (NMDA) receptors represents a promising strategy for the treatment of acute (e.g. stroke, epilepsy, traumatic brain injury) and chronic neuronal disorders (e.g. neuropathic pain, depression, Alzheimer's and Parkinson's disease) (Bräuner-Osborne et al., 2000; Kew & Kemp, 2005; Paoletti et al., 2013; Wu & Zhou, 2009). The NMDA receptor consists of four proteins (heterotetramer), which form a cation channel allowing the penetration of Ca2+ and Na+ ions into the neuron (Furukawa et al., 2005). In particular, NMDA receptors containing the GluN2B subunit are an attractive target for the development of innovative drugs, since the expression of the GluN2B subunit is limited to only a few regions of the central nervous system, including cortex, striatum and hippocampus (Borza & Domány, 2006; Layton et al., 2006; Mony et al., 2009). Moreover, the GluN2B subunit can be addressed selectively by ligands interacting with the so-called ifenprodil binding site, which is formed at the interface between GluN2B and GluN1 subunits (Karakas et al., 2011; Paoletti et al., 2013).
The 2-piperidino-1-phenylpropan-1-ol derivative ifenprodil (Paoletti et al., 2013; Williams, 2001) (Fig. 1) represents the first ligand interacting with this binding site at the NMDA receptor. As a result of its poor selectivity and low bioavailability, ifenprodil has not been developed as a drug for clinical use. In order to improve the selectivity and metabolic stability, the flexible β-aminoalcohol of ifenprodil has been incorporated into a rigid tetrahydro-3-benzazepine ring (Tewes et al., 2010a,b; Schepmann et al., 2010; Falck et al., 2014).
For the synthesis of 3-benzazepine analogs of ifenprodil, we developed a chiral pool synthesis starting with (R)-alanine. In a five step synthesis (Fig. 1), the central intermediate ketone (R)-1 was prepared from (R)-alanine (Tewes et al., 2015). Synthesis of GluN2B antagonists included the lead compound ifenprodil and the target compound (S,R)-4.
The reduction of the ketone (R)-1 with NaBH4 led to the diastereomeric
(S,R)-2 and (R,R)-3, which were further transformed into potent GluN2B antagonists by reductive removal of the tosyl group, alkylation with 1-chloro-4-phenylbutane and finally, hydrogenolytic cleavage of the benzyl ether. For example, the phenol (S,R)-4 displays very high affinity towards the ifenprodil binding site of the NMDA receptor (Ki = 26 nM) and, moreover, (S,R)-4 is able to reduce the glutamate- and glycine-induced cytotoxicity with an IC50 value of 9.0 nM (Tewes et al., 2015).The diastereomeric
(S,R)-2 and (R,R)-3 were separated by flash and isolated in 50% and 23% yield, respectively. However, as a result of flexibility of the seven-membered tetrahydro-3-benzazepine ring, it was not possible to assign the of the methyl and hydroxy moiety. Therefore, the main diastereomer (1S,2R-2) was crystallized and we report herein on its crystal structure.The molecular structure of the title compound (1S,2R-2) is illustrated in Fig. 2. Since the starting material was not enantiomerically pure, the compound crystallized as a racemate. However, the relative trans-configuration of the OH and CH3 groups in the 1- and 2-positions on the azepin ring is clearly shown, leading to a (1S,2R)-configuration for compound (S*,R*)-2. The CH3 and the OH groups adopt an axial orientation in the seven-membered azepine ring which has a chair conformation. The benzyl ring (C16–C21) and the tosylate ring (C25–C30) are inclined to the benzo ring (C6–C11) by 78.39 (15) and 77.03 (14)°, respectively, and to one another by 13.82 (15)°. In the azepine ring, the bonds between the N atom, N3, and its adjacent C atoms, C2 and C4 [1.483 (3) and 1.480 (3) Å, respectively] are naturally shorter than the corresponding C—C bonds [1.509 (4)–1.519 (4) Å]. The exocyclic N3—S22 bond is considerably longer at 1.622 (2) Å. The bond angles within the azepine ring are close to the tetrahedral angle [106.2 (2)–116.3 (2) °]. Fig. 2 also shows the tetrahedral geometry around the S atom, S22, of the sulfonamide.
In the crystal, molecules are linked via O—H···O and C—H···O hydrogen bonds, forming double-stranded chains along the a-axis direction (Table 1 and Fig. 3). The chains are linked via C—H···π interactions (Table 1), forming a three-dimensional architecture.
\ (1S,2R)-7-Benzyloxy-2-methyl-3-\ (4-tosyl)-2,3,4,5-tetrahydro-1H-3-benzazepin-1-ol [(S,R)-2] and (1R,2R)-7-benzyloxy-2-methyl-3-(4-\ tosyl)-2,3,4,5-tetrahydro-1H-3-benzazepin-1-ol [(R,R)-3]
Details of the synthesis of the title compound are illustrated in Fig. 1.
As described for the synthesis of (R,S)-2 and (S,S)-3 (Tewes et al. (2015), the ketone (R)-1 (5.20 g, 12.0 mmol) was reduced with NaBH4 (909 mg, 23.9 mmol) in CH3OH (125 ml).
(S,R)-2 (Rf = 0.29): Colourless solid, m.p. 417 K, yield 2.60 g (50%). Purity (HPLC): 98.1%, tR = 22.6 min. [α]D = +1.20 (c = 0.91, CH3OH, 2.1% ee). Spectroscopic data are given in Tewes et al. (2015).
(R,R)-3 (Rf = 0.44): Colourless solid, m.p. 425 K, yield 1.20 g (23%). Purity (HPLC): 95.6%, tR = 22.2 min. [α]D = +1.89 (c = 0.98, CH3OH, 8.5% ee). Spectroscopic data are given in Tewes et al. (2015).
Crystals of the title compound, suitable for X-ray
were obtained by ?????? detailsCrystal data, data collection and structure
details are summarized in Table 3. The OH and C-bound H atoms were included in calculated positions and treated as riding atoms: O—H = 0.83 Å, C—H = 0.94–0.99 Å with Uiso(H) = 1.5Ueq(O or C-methyl) and 1.2Ueq(C) for other H atoms.Data collection: COLLECT (Nonius, 1998); cell
COLLECT (Nonius, 1998); data reduction: DENZO–SMN (Otwinowski & Minor, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: XP in SHELXTL (Sheldrick, 2008) and Mercury (Macrae et al., 2008); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).Fig. 1. Synthesis of GluN2B antagonists including the lead compound ifenprodil and the target compound (S,R)-4. Reagents and reaction conditions: (a) NaBH4, CH3OH, (S,R)-2 50%, (R,R)-3 23%. | |
Fig. 2. The molecular structure of the title compound, with atom labelling. Displacement ellipsoids are drawn at the 30% probability level. | |
Fig. 3. A view along the a axis of the crystal packing of the title compound. The hydrogen bonds are shown as dashed lines (see Table 1); for clarity, H atoms not involved in these interactions are omitted. |
C25H27NO4S | F(000) = 1856 |
Mr = 437.54 | Dx = 1.337 Mg m−3 |
Orthorhombic, Pbca | Cu Kα radiation, λ = 1.54178 Å |
Hall symbol: -P 2ac 2ab | Cell parameters from 5365 reflections |
a = 7.5071 (2) Å | θ = 0.9–68.3° |
b = 23.6113 (8) Å | µ = 1.59 mm−1 |
c = 24.5180 (8) Å | T = 223 K |
V = 4345.9 (2) Å3 | Plate, colourless |
Z = 8 | 0.25 × 0.15 × 0.08 mm |
Nonius KappaCCD APEXII diffractometer | 3874 independent reflections |
Radiation source: fine-focus sealed tube | 3543 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.064 |
ω and φ scans | θmax = 67.7°, θmin = 4.2° |
Absorption correction: multi-scan (DENZO; Otwinowski et al., 2003) | h = 0→9 |
Tmin = 0.692, Tmax = 0.884 | k = 0→27 |
40664 measured reflections | l = 0→29 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.058 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.151 | H-atom parameters constrained |
S = 1.10 | w = 1/[σ2(Fo2) + (0.0619P)2 + 5.5349P] where P = (Fo2 + 2Fc2)/3 |
3874 reflections | (Δ/σ)max = 0.001 |
283 parameters | Δρmax = 0.64 e Å−3 |
0 restraints | Δρmin = −0.27 e Å−3 |
C25H27NO4S | V = 4345.9 (2) Å3 |
Mr = 437.54 | Z = 8 |
Orthorhombic, Pbca | Cu Kα radiation |
a = 7.5071 (2) Å | µ = 1.59 mm−1 |
b = 23.6113 (8) Å | T = 223 K |
c = 24.5180 (8) Å | 0.25 × 0.15 × 0.08 mm |
Nonius KappaCCD APEXII diffractometer | 3874 independent reflections |
Absorption correction: multi-scan (DENZO; Otwinowski et al., 2003) | 3543 reflections with I > 2σ(I) |
Tmin = 0.692, Tmax = 0.884 | Rint = 0.064 |
40664 measured reflections |
R[F2 > 2σ(F2)] = 0.058 | 0 restraints |
wR(F2) = 0.151 | H-atom parameters constrained |
S = 1.10 | Δρmax = 0.64 e Å−3 |
3874 reflections | Δρmin = −0.27 e Å−3 |
283 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | −0.2632 (4) | 0.25588 (13) | 0.33843 (12) | 0.0433 (7) | |
H1 | −0.3327 | 0.2614 | 0.3045 | 0.052* | |
C2 | −0.0688 (4) | 0.26290 (13) | 0.32342 (11) | 0.0444 (7) | |
H2 | −0.0462 | 0.2383 | 0.2914 | 0.053* | |
N3 | 0.0518 (3) | 0.24359 (10) | 0.36757 (9) | 0.0382 (5) | |
C4 | 0.0510 (4) | 0.27343 (13) | 0.42068 (11) | 0.0448 (7) | |
H4A | 0.0656 | 0.3141 | 0.4142 | 0.054* | |
H4B | 0.1530 | 0.2605 | 0.4423 | 0.054* | |
C5 | −0.1175 (4) | 0.26389 (14) | 0.45294 (11) | 0.0480 (7) | |
H5A | −0.0934 | 0.2721 | 0.4914 | 0.058* | |
H5B | −0.1504 | 0.2238 | 0.4502 | 0.058* | |
C6 | −0.2745 (4) | 0.29959 (12) | 0.43450 (11) | 0.0408 (6) | |
C7 | −0.3588 (4) | 0.33478 (12) | 0.47111 (11) | 0.0403 (6) | |
H7 | −0.3162 | 0.3369 | 0.5071 | 0.048* | |
C8 | −0.5061 (4) | 0.36736 (11) | 0.45600 (10) | 0.0360 (6) | |
C9 | −0.5624 (4) | 0.36714 (11) | 0.40220 (11) | 0.0384 (6) | |
H9 | −0.6574 | 0.3902 | 0.3909 | 0.046* | |
C10 | −0.4758 (4) | 0.33218 (12) | 0.36548 (11) | 0.0415 (7) | |
H10 | −0.5136 | 0.3322 | 0.3289 | 0.050* | |
C11 | −0.3365 (4) | 0.29737 (12) | 0.38014 (11) | 0.0411 (6) | |
O12 | −0.2846 (3) | 0.19835 (9) | 0.35386 (10) | 0.0508 (6) | |
H12 | −0.3873 | 0.1933 | 0.3655 | 0.076* | |
C13 | −0.0263 (5) | 0.32466 (13) | 0.30574 (13) | 0.0515 (8) | |
H13A | −0.0412 | 0.3498 | 0.3367 | 0.077* | |
H13B | −0.1067 | 0.3359 | 0.2767 | 0.077* | |
H13C | 0.0956 | 0.3268 | 0.2928 | 0.077* | |
O14 | −0.5837 (3) | 0.39821 (8) | 0.49686 (7) | 0.0425 (5) | |
C15 | −0.7379 (4) | 0.43106 (13) | 0.48158 (12) | 0.0459 (7) | |
H15A | −0.8273 | 0.4065 | 0.4646 | 0.055* | |
H15B | −0.7039 | 0.4603 | 0.4551 | 0.055* | |
C16 | −0.8140 (4) | 0.45824 (12) | 0.53175 (11) | 0.0393 (6) | |
C17 | −0.9211 (4) | 0.42782 (14) | 0.56697 (13) | 0.0520 (8) | |
H17 | −0.9428 | 0.3892 | 0.5605 | 0.062* | |
C18 | −0.9964 (5) | 0.45419 (17) | 0.61180 (14) | 0.0611 (9) | |
H18 | −1.0692 | 0.4334 | 0.6357 | 0.073* | |
C19 | −0.9651 (5) | 0.51087 (16) | 0.62151 (13) | 0.0582 (9) | |
H19 | −1.0168 | 0.5287 | 0.6519 | 0.070* | |
C20 | −0.8587 (4) | 0.54114 (13) | 0.58683 (12) | 0.0499 (8) | |
H20 | −0.8368 | 0.5797 | 0.5936 | 0.060* | |
C21 | −0.7835 (4) | 0.51513 (12) | 0.54197 (12) | 0.0424 (7) | |
H21 | −0.7110 | 0.5362 | 0.5182 | 0.051* | |
S22 | 0.22307 (9) | 0.20715 (3) | 0.34775 (3) | 0.0364 (2) | |
O23 | 0.3341 (2) | 0.19811 (9) | 0.39487 (8) | 0.0422 (5) | |
O24 | 0.3039 (3) | 0.23240 (9) | 0.30048 (8) | 0.0447 (5) | |
C26 | 0.1770 (4) | 0.12036 (12) | 0.27553 (12) | 0.0431 (7) | |
H26 | 0.2349 | 0.1434 | 0.2498 | 0.052* | |
C27 | 0.1279 (4) | 0.06527 (13) | 0.26233 (12) | 0.0483 (7) | |
H27 | 0.1544 | 0.0511 | 0.2274 | 0.058* | |
C28 | 0.0412 (4) | 0.03100 (13) | 0.29945 (12) | 0.0476 (7) | |
C31 | −0.0091 (6) | −0.02894 (14) | 0.28515 (16) | 0.0657 (10) | |
H31A | −0.0590 | −0.0299 | 0.2487 | 0.099* | |
H31B | −0.0968 | −0.0427 | 0.3110 | 0.099* | |
H31C | 0.0960 | −0.0528 | 0.2866 | 0.099* | |
C29 | 0.0012 (4) | 0.05326 (14) | 0.35077 (12) | 0.0512 (8) | |
H29 | −0.0591 | 0.0306 | 0.3763 | 0.061* | |
C30 | 0.0483 (4) | 0.10756 (14) | 0.36461 (12) | 0.0467 (7) | |
H30 | 0.0193 | 0.1222 | 0.3992 | 0.056* | |
C25 | 0.1392 (3) | 0.14065 (12) | 0.32714 (11) | 0.0373 (6) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0446 (16) | 0.0458 (16) | 0.0396 (14) | 0.0026 (13) | −0.0051 (13) | −0.0044 (12) |
C2 | 0.0442 (16) | 0.0598 (18) | 0.0294 (13) | 0.0093 (14) | −0.0050 (12) | −0.0057 (12) |
N3 | 0.0338 (11) | 0.0522 (14) | 0.0287 (11) | 0.0052 (10) | −0.0015 (9) | −0.0057 (10) |
C4 | 0.0424 (16) | 0.0570 (18) | 0.0349 (14) | 0.0026 (14) | −0.0042 (12) | −0.0040 (13) |
C5 | 0.0465 (17) | 0.065 (2) | 0.0320 (14) | 0.0151 (15) | 0.0018 (13) | 0.0027 (13) |
C6 | 0.0420 (15) | 0.0484 (16) | 0.0322 (14) | 0.0081 (13) | −0.0002 (12) | −0.0002 (12) |
C7 | 0.0445 (16) | 0.0467 (15) | 0.0295 (13) | 0.0076 (13) | −0.0026 (12) | 0.0003 (11) |
C8 | 0.0392 (14) | 0.0344 (13) | 0.0345 (13) | 0.0005 (12) | 0.0011 (11) | −0.0008 (10) |
C9 | 0.0397 (15) | 0.0369 (14) | 0.0387 (14) | 0.0057 (12) | −0.0057 (12) | 0.0002 (11) |
C10 | 0.0465 (16) | 0.0453 (16) | 0.0328 (13) | 0.0080 (13) | −0.0084 (12) | −0.0028 (11) |
C11 | 0.0399 (15) | 0.0465 (16) | 0.0368 (14) | 0.0039 (13) | −0.0019 (12) | −0.0005 (12) |
O12 | 0.0405 (12) | 0.0410 (11) | 0.0709 (15) | −0.0013 (9) | −0.0018 (11) | −0.0050 (10) |
C13 | 0.0531 (18) | 0.0531 (18) | 0.0483 (17) | 0.0045 (15) | 0.0078 (15) | 0.0148 (14) |
O14 | 0.0424 (11) | 0.0503 (11) | 0.0346 (10) | 0.0144 (9) | −0.0010 (8) | −0.0037 (8) |
C15 | 0.0469 (16) | 0.0475 (16) | 0.0432 (15) | 0.0129 (14) | −0.0060 (13) | −0.0047 (13) |
C16 | 0.0356 (14) | 0.0421 (15) | 0.0401 (14) | 0.0084 (12) | −0.0039 (12) | −0.0004 (12) |
C17 | 0.0545 (19) | 0.0481 (17) | 0.0533 (18) | −0.0031 (15) | −0.0016 (15) | 0.0022 (14) |
C18 | 0.0516 (19) | 0.082 (3) | 0.0494 (19) | −0.0063 (18) | 0.0107 (15) | 0.0127 (17) |
C19 | 0.0538 (19) | 0.078 (2) | 0.0425 (17) | 0.0188 (18) | 0.0036 (15) | −0.0082 (16) |
C20 | 0.0566 (19) | 0.0456 (17) | 0.0473 (17) | 0.0131 (15) | −0.0035 (15) | −0.0065 (13) |
C21 | 0.0411 (16) | 0.0430 (15) | 0.0432 (15) | 0.0047 (13) | 0.0000 (12) | 0.0006 (12) |
S22 | 0.0295 (3) | 0.0466 (4) | 0.0330 (3) | 0.0008 (3) | 0.0022 (3) | −0.0022 (3) |
O23 | 0.0300 (9) | 0.0565 (12) | 0.0401 (10) | 0.0032 (9) | −0.0036 (8) | −0.0038 (9) |
O24 | 0.0428 (11) | 0.0533 (12) | 0.0379 (10) | −0.0057 (9) | 0.0086 (9) | −0.0006 (9) |
C26 | 0.0448 (16) | 0.0470 (16) | 0.0374 (14) | −0.0002 (13) | 0.0059 (12) | 0.0012 (12) |
C27 | 0.0576 (19) | 0.0493 (17) | 0.0380 (16) | 0.0012 (15) | 0.0049 (14) | −0.0051 (13) |
C28 | 0.0494 (17) | 0.0473 (16) | 0.0461 (16) | −0.0006 (14) | −0.0014 (14) | −0.0003 (13) |
C31 | 0.084 (3) | 0.0484 (19) | 0.065 (2) | −0.0099 (18) | 0.003 (2) | −0.0034 (16) |
C29 | 0.0523 (19) | 0.0571 (19) | 0.0443 (17) | −0.0119 (16) | 0.0052 (14) | 0.0047 (14) |
C30 | 0.0468 (17) | 0.0580 (18) | 0.0354 (14) | −0.0075 (14) | 0.0084 (13) | −0.0043 (13) |
C25 | 0.0313 (13) | 0.0460 (15) | 0.0347 (13) | 0.0014 (12) | 0.0012 (11) | −0.0004 (12) |
C1—O12 | 1.419 (4) | C15—C16 | 1.500 (4) |
C1—C2 | 1.514 (4) | C16—C17 | 1.381 (4) |
C1—C11 | 1.519 (4) | C16—C21 | 1.386 (4) |
C2—N3 | 1.483 (3) | C17—C18 | 1.384 (5) |
C2—C13 | 1.554 (4) | C18—C19 | 1.379 (5) |
N3—C4 | 1.480 (3) | C19—C20 | 1.368 (5) |
N3—S22 | 1.622 (2) | C20—C21 | 1.380 (4) |
C4—C5 | 1.509 (4) | S22—O24 | 1.438 (2) |
C5—C6 | 1.518 (4) | S22—O23 | 1.441 (2) |
C6—C7 | 1.377 (4) | S22—C25 | 1.765 (3) |
C6—C11 | 1.413 (4) | C26—C25 | 1.382 (4) |
C7—C8 | 1.397 (4) | C26—C27 | 1.390 (4) |
C8—O14 | 1.369 (3) | C27—C28 | 1.381 (4) |
C8—C9 | 1.385 (4) | C28—C29 | 1.396 (4) |
C9—C10 | 1.384 (4) | C28—C31 | 1.506 (4) |
C10—C11 | 1.377 (4) | C29—C30 | 1.373 (4) |
O14—C15 | 1.443 (3) | C30—C25 | 1.386 (4) |
O12—C1—C2 | 106.2 (2) | C17—C16—C21 | 119.2 (3) |
O12—C1—C11 | 113.4 (2) | C17—C16—C15 | 120.8 (3) |
C2—C1—C11 | 116.3 (3) | C21—C16—C15 | 120.0 (3) |
N3—C2—C1 | 112.2 (2) | C16—C17—C18 | 120.0 (3) |
N3—C2—C13 | 111.5 (2) | C19—C18—C17 | 120.2 (3) |
C1—C2—C13 | 111.6 (3) | C20—C19—C18 | 120.0 (3) |
C4—N3—C2 | 119.5 (2) | C19—C20—C21 | 120.1 (3) |
C4—N3—S22 | 121.29 (18) | C20—C21—C16 | 120.5 (3) |
C2—N3—S22 | 115.37 (17) | O24—S22—O23 | 117.62 (12) |
N3—C4—C5 | 113.2 (2) | O24—S22—N3 | 110.87 (12) |
C4—C5—C6 | 114.3 (2) | O23—S22—N3 | 107.28 (11) |
C7—C6—C11 | 119.1 (3) | O24—S22—C25 | 106.78 (12) |
C7—C6—C5 | 119.9 (2) | O23—S22—C25 | 107.70 (12) |
C11—C6—C5 | 121.1 (2) | N3—S22—C25 | 105.96 (13) |
C6—C7—C8 | 121.5 (2) | C25—C26—C27 | 118.9 (3) |
O14—C8—C9 | 124.7 (2) | C28—C27—C26 | 121.3 (3) |
O14—C8—C7 | 115.8 (2) | C27—C28—C29 | 118.3 (3) |
C9—C8—C7 | 119.5 (2) | C27—C28—C31 | 121.0 (3) |
C10—C9—C8 | 118.6 (3) | C29—C28—C31 | 120.6 (3) |
C11—C10—C9 | 122.9 (3) | C30—C29—C28 | 121.3 (3) |
C10—C11—C6 | 118.3 (3) | C29—C30—C25 | 119.3 (3) |
C10—C11—C1 | 119.0 (3) | C26—C25—C30 | 120.8 (3) |
C6—C11—C1 | 122.6 (3) | C26—C25—S22 | 119.8 (2) |
C8—O14—C15 | 116.0 (2) | C30—C25—S22 | 119.2 (2) |
O14—C15—C16 | 108.8 (2) | ||
O12—C1—C2—N3 | −53.8 (3) | O14—C15—C16—C17 | −80.1 (3) |
C11—C1—C2—N3 | 73.3 (3) | O14—C15—C16—C21 | 102.7 (3) |
O12—C1—C2—C13 | −179.8 (2) | C21—C16—C17—C18 | 0.0 (5) |
C11—C1—C2—C13 | −52.6 (3) | C15—C16—C17—C18 | −177.2 (3) |
C1—C2—N3—C4 | −64.1 (3) | C16—C17—C18—C19 | 0.0 (5) |
C13—C2—N3—C4 | 61.9 (3) | C17—C18—C19—C20 | −0.2 (5) |
C1—C2—N3—S22 | 137.5 (2) | C18—C19—C20—C21 | 0.3 (5) |
C13—C2—N3—S22 | −96.4 (3) | C19—C20—C21—C16 | −0.3 (5) |
C2—N3—C4—C5 | 69.7 (3) | C17—C16—C21—C20 | 0.1 (4) |
S22—N3—C4—C5 | −133.3 (2) | C15—C16—C21—C20 | 177.4 (3) |
N3—C4—C5—C6 | −79.2 (3) | C4—N3—S22—O24 | −114.3 (2) |
C4—C5—C6—C7 | −123.1 (3) | C2—N3—S22—O24 | 43.7 (2) |
C4—C5—C6—C11 | 56.9 (4) | C4—N3—S22—O23 | 15.4 (3) |
C11—C6—C7—C8 | 1.3 (4) | C2—N3—S22—O23 | 173.3 (2) |
C5—C6—C7—C8 | −178.6 (3) | C4—N3—S22—C25 | 130.2 (2) |
C6—C7—C8—O14 | 176.6 (3) | C2—N3—S22—C25 | −71.8 (2) |
C6—C7—C8—C9 | −4.1 (4) | C25—C26—C27—C28 | 0.7 (5) |
O14—C8—C9—C10 | −177.5 (3) | C26—C27—C28—C29 | 0.8 (5) |
C7—C8—C9—C10 | 3.2 (4) | C26—C27—C28—C31 | −179.1 (3) |
C8—C9—C10—C11 | 0.3 (5) | C27—C28—C29—C30 | −0.8 (5) |
C9—C10—C11—C6 | −3.1 (5) | C31—C28—C29—C30 | 179.1 (3) |
C9—C10—C11—C1 | 173.4 (3) | C28—C29—C30—C25 | −0.8 (5) |
C7—C6—C11—C10 | 2.2 (4) | C27—C26—C25—C30 | −2.3 (4) |
C5—C6—C11—C10 | −177.9 (3) | C27—C26—C25—S22 | 172.5 (2) |
C7—C6—C11—C1 | −174.1 (3) | C29—C30—C25—C26 | 2.4 (5) |
C5—C6—C11—C1 | 5.8 (5) | C29—C30—C25—S22 | −172.4 (2) |
O12—C1—C11—C10 | −116.8 (3) | O24—S22—C25—C26 | 7.2 (3) |
C2—C1—C11—C10 | 119.7 (3) | O23—S22—C25—C26 | −120.0 (2) |
O12—C1—C11—C6 | 59.5 (4) | N3—S22—C25—C26 | 125.5 (2) |
C2—C1—C11—C6 | −64.0 (4) | O24—S22—C25—C30 | −177.9 (2) |
C9—C8—O14—C15 | 1.8 (4) | O23—S22—C25—C30 | 54.9 (3) |
C7—C8—O14—C15 | −178.9 (2) | N3—S22—C25—C30 | −59.7 (3) |
C8—O14—C15—C16 | 175.5 (2) |
Cg1, Cg2 and Cg3 are the centroids of rings C6–C11, C16–C21 and C25–C30, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
O12—H12···O23i | 0.83 | 2.22 | 3.034 (3) | 169 |
C2—H2···O24ii | 0.99 | 2.52 | 3.265 (3) | 132 |
C18—H18···Cg3iii | 0.94 | 2.89 | 3.738 (4) | 150 |
C20—H20···Cg1iv | 0.94 | 2.83 | 3.631 (3) | 144 |
C29—H29···Cg2v | 0.94 | 2.76 | 3.545 (3) | 142 |
Symmetry codes: (i) x−1, y, z; (ii) x−1/2, y, −z+1/2; (iii) x−3/2, −y+1/2, −z+1; (iv) −x−1, −y+1, −z+1; (v) x+1/2, −y+1/2, −z+1. |
Cg1, Cg2 and Cg3 are the centroids of rings C6–C11, C16–C21 and C25–C30, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
O12—H12···O23i | 0.83 | 2.22 | 3.034 (3) | 169 |
C2—H2···O24ii | 0.99 | 2.52 | 3.265 (3) | 132 |
C18—H18···Cg3iii | 0.94 | 2.89 | 3.738 (4) | 150 |
C20—H20···Cg1iv | 0.94 | 2.83 | 3.631 (3) | 144 |
C29—H29···Cg2v | 0.94 | 2.76 | 3.545 (3) | 142 |
Symmetry codes: (i) x−1, y, z; (ii) x−1/2, y, −z+1/2; (iii) x−3/2, −y+1/2, −z+1; (iv) −x−1, −y+1, −z+1; (v) x+1/2, −y+1/2, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C25H27NO4S |
Mr | 437.54 |
Crystal system, space group | Orthorhombic, Pbca |
Temperature (K) | 223 |
a, b, c (Å) | 7.5071 (2), 23.6113 (8), 24.5180 (8) |
V (Å3) | 4345.9 (2) |
Z | 8 |
Radiation type | Cu Kα |
µ (mm−1) | 1.59 |
Crystal size (mm) | 0.25 × 0.15 × 0.08 |
Data collection | |
Diffractometer | Nonius KappaCCD APEXII |
Absorption correction | Multi-scan (DENZO; Otwinowski et al., 2003) |
Tmin, Tmax | 0.692, 0.884 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 40664, 3874, 3543 |
Rint | 0.064 |
(sin θ/λ)max (Å−1) | 0.600 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.058, 0.151, 1.10 |
No. of reflections | 3874 |
No. of parameters | 283 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.64, −0.27 |
Computer programs: COLLECT (Nonius, 1998), DENZO–SMN (Otwinowski & Minor, 1997), SHELXS97 (Sheldrick, 2008), XP in SHELXTL (Sheldrick, 2008) and Mercury (Macrae et al., 2008), SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).
Acknowledgements
Financial support by the Deutsche Forschungsgemeinschaft is gratefully acknowledged.
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