research communications
trans-bis(N-methyliminodiacetato-κ3O,N,O′)chromate(III) from synchrotron data
of ammonium/potassiumaPohang Accelerator Laboratory, POSTECH, Pohang 37673, Republic of Korea, and bDepartment of Chemistry, Andong National University, Andong 36729, Republic of Korea
*Correspondence e-mail: jhchoi@anu.ac.kr
The structure of the title compound, [(NH4)0.8K0.2][Cr(C5H7NO4)2] (C5H7NO4 is methyliminodiacetate; mida), has been determined from synchrotron data. The CrIII atom is located on a centre of symmetry and is coordinated by two N atoms and four O atoms of two facially arranged tridentate mida ligands, displaying a slightly distorted octahedral coordination environment. The Cr—N and mean Cr—O bond lengths are 2.0792 (14) and 1.958 (14) Å, respectively. The cation site is located on a twofold rotation axis and shows occupational disorder, being occupied by ammonium and potassium cations in a 0.8:0.2 ratio. In the crystal, intermolecular hydrogen bonds involving the N—H groups of the ammonium cation as donor and the two non-coordinating O atoms of the carboxylate group as acceptor groups consolidate the three-dimensional packing.
Keywords: crystal structure; synchrotron radiation; ammonium/potassium salt; bis(methyliminodiacetato)chromate(III) ion; mida; trans-facial configuration; hydrogen bonding.
CCDC reference: 1494843
1. Chemical context
Methyliminodiacetate (abbreviated here as mida; C5H7NO4) can coordinate to a central metal ion as a tridentate ligand through one N atom and two O atoms. The mida ligand differs from iminodiacetate (ida) in the substitution of the imino hydrogen with a methyl group. This change has significant consequences with respect to the configuration of the bis-chromate(III) complexes with these ligands. Two facial configurations in cis or trans mode relative to the two N atoms have been observed: for example K[Cr(ida)2]·3H2O (Mootz & Wunderlich, 1980) and Na[Cr(ida)2]·1.5H2O (Li et al., 2003) are cis-fac structures whereas Na[Cr(mida)2] is a trans-fac structure (Suh et al., 1997). However, the trans meridional isomer of octahedrally coordinated chromium(III) with ida or mida ligands has not yet been identified. In order to confirm the bonding mode of the methyliminodiacetato ligand and its structural arrangement, we report herein on the of the title salt, [(NH4)0.8K0.2][Cr(C5H7NO4)2], (I).
2. Structural commentary
Counter-ionic species play important roles in crystal packings and hydrogen-bonding patterns. The structure reported here is another example of a [Cr(mida)2]− salt but with a different cation (Suh et al., 1996, 1997). The structural analysis shows that the two tridentate mida dianions octahedrally coordinate to the CrIII metal atom through one N atom and two carboxylate O atoms in a facial configuration. The coordinating N atoms are mutually trans due to for the entire anionic complex. The of (I) comprises one half of the CrIII complex anion and one occupationally disordered ammonium/potassium cation (situated on a twofold rotation axis), respectively. An ellipsoid plot of title compound together with the atomic numbering is illustrated in Fig. 1.
The facial configuration of the complex anion in (I) can be compared with that of NH4[Cr(pydc)2] (pydc = pyridine-2,6-dicarboxylate; Moon & Choi, 2015) where it displays a trans meridional configuration. The Cr—N and mean Cr—O bond lengths involving the mida ligands are 2.0792 (14) and 1.958 (14) Å, respectively, in good agreement with the values observed for Na[Cr(mida)2] (Suh et al., 1997). Bond angles about the central chromium atom are 90.23 (6) for O1—Cr1—O3, 84.66 (6) for O1—Cr1—N1 and 82.62 (5)° for N1—Cr1—O3 indicating a distorted octahedral coordination environment. The C–O bond lengths within the carboxylate group of the mida ligand range from 1.219 (2) to 1.296 (2) Å and can be compared with values of 1.225 (15) and 1.294 (15) Å for NH4[Cr(pydc)2] (Moon & Choi, 2015). The slightly longer C—O bond length (C1—O2 and C3—O4) and smaller O—C—O bond angles of the carboxylate groups in the mida ligand of (I) compared to the ligand in Na[Cr(mida)2] (Suh et al., 1997) may be attributed to the involvement of the two non-coordinating O atoms in hydrogen bonds with the N—H groups of the ammonium cation. The N—C and C—C distances in the mida moieties are close to those found in the free H2mida molecule (Shkol'nikova et al., 1986) and are equal to 1.479 (2)–1.494 (2) and 1.508 (3)–1.512 (2) Å, respectively.
3. Supramolecular features
The pattern of hydrogen bonding around the cation is different from the crystal packing network in the related sodium salt (Suh et al., 1996, 1997). The cation is linked to four non-coordinating O atoms of carboxylate groups from four neighboring mida ligands through classical N—H⋯O hydrogen bonds (Table 1). An array of these interactions generate a three-dimensional network of molecules whereby individual molecules are stacked along the b-axis direction (Fig. 2).
4. Database survey
A search of the Cambridge Structural Database (Version 5.37, Feb. 2016 with two updates; Groom et al., 2016) gave just two hits for a complex anion [Cr(C5H7NO4)2]− unit. The crystal structures of Na[Cr(mida)2] with three different space groups have been reported and compared previously (Suh et al., 1996, 1997).
5. Synthesis and crystallization
All chemicals were reagent-grade materials and were used without further purification. The starting material, K[Cr(mida)2] was prepared by a method similar to that outlined previously (Wernicke et al., 1977; Uehara et al., 1970). The potassium salt (0.25 g) was dissolved in 15 mL of water at 343 K and added to 5 mL of water containing 0.50 g of NH4Cl. The resulting solution was filtered to remove any impurities and allowed to stand at room temperature for several days to give pale pink plate-like crystals of the mixed-occupancy ammonium/potassium salt, (I), suitable for X-ray diffraction analysis.
6. Refinement
Crystal data, data collection and structure . All H atoms of the complex were placed in geometrically idealized positions and constrained to ride on their parent atoms, with C—H distances of 0.97–0.98 Å and with Uiso(H) values of 1.5 (methyl) and 1.2 times Ueq (all others) of the parent atoms. The H atoms of the cation were located from difference Fourier maps and refined with DFIX and DANG restraints and fixed N—H distances of 0.855 (9) and 0.869 (9) Å, with Uiso(H) values of 1.2Ueq(N). The occupancy of mixed-occupied (NH4/K) first was refined and then fixed at a ratio of 0.8:0.2. The corresponding (NH4/K) sites was refined using EXYZ/EADP commands for the two atom types.
details are summarized in Table 2Supporting information
CCDC reference: 1494843
https://doi.org/10.1107/S2056989016011804/wm5304sup1.cif
contains datablock I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2056989016011804/wm5304Isup2.hkl
Data collection: PAL BL2D-SMDC (Shin et al., 2016); cell
HKL3000sm (Otwinowski & Minor, 1997); data reduction: HKL3000sm (Otwinowski & Minor, 1997); program(s) used to solve structure: SHELXT2014 (Sheldrick, 2015a); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015b); molecular graphics: DIAMOND (Putz & Brandenburg, 2014); software used to prepare material for publication: publCIF (Westrip, 2010).[(NH4)0.8K0.2][Cr(C5H7NO4)2] | F(000) = 754 |
Mr = 364.48 | Dx = 1.727 Mg m−3 |
Monoclinic, C2/c | Synchrotron radiation, λ = 0.610 Å |
a = 16.786 (3) Å | Cell parameters from 23758 reflections |
b = 6.5240 (13) Å | θ = 0.4–33.7° |
c = 13.925 (3) Å | µ = 0.61 mm−1 |
β = 113.19 (3)° | T = 243 K |
V = 1401.8 (6) Å3 | Plate, pale pink |
Z = 4 | 0.02 × 0.02 × 0.01 mm |
ADSC Q210 CCD area-detector diffractometer | 1519 reflections with I > 2σ(I) |
Radiation source: PLSII 2D bending magnet | Rint = 0.028 |
ω scan | θmax = 25.0°, θmin = 2.7° |
Absorption correction: empirical (using intensity measurements) (HKL3000sm SCALEPACK; Otwinowski & Minor, 1997) | h = −23→23 |
Tmin = 0.989, Tmax = 0.995 | k = −9→9 |
6984 measured reflections | l = −17→17 |
1833 independent reflections |
Refinement on F2 | Hydrogen site location: mixed |
Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
R[F2 > 2σ(F2)] = 0.035 | w = 1/[σ2(Fo2) + (0.0702P)2] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.100 | (Δ/σ)max < 0.001 |
S = 1.05 | Δρmax = 0.40 e Å−3 |
1833 reflections | Δρmin = −0.69 e Å−3 |
110 parameters | Extinction correction: SHELXL2014 (Sheldrick, 2015b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
3 restraints | Extinction coefficient: 0.0118 (19) |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Cr1 | 0.5000 | 0.5000 | 0.5000 | 0.01108 (14) | |
O1 | 0.53582 (8) | 0.3160 (2) | 0.61977 (10) | 0.0228 (3) | |
O2 | 0.64463 (9) | 0.2272 (2) | 0.76630 (10) | 0.0267 (3) | |
O3 | 0.54917 (8) | 0.3115 (2) | 0.42746 (10) | 0.0228 (3) | |
O4 | 0.65906 (10) | 0.2681 (2) | 0.37913 (13) | 0.0361 (4) | |
N1 | 0.62700 (8) | 0.6057 (2) | 0.56638 (10) | 0.0129 (3) | |
C1 | 0.61393 (11) | 0.3333 (3) | 0.68756 (13) | 0.0175 (3) | |
C2 | 0.67027 (13) | 0.4929 (3) | 0.66707 (15) | 0.0326 (5) | |
H2A | 0.6886 | 0.5922 | 0.7245 | 0.039* | |
H2B | 0.7225 | 0.4260 | 0.6668 | 0.039* | |
C3 | 0.62435 (11) | 0.3600 (3) | 0.42841 (13) | 0.0196 (4) | |
C4 | 0.66622 (12) | 0.5484 (3) | 0.49128 (15) | 0.0232 (4) | |
H4A | 0.7283 | 0.5226 | 0.5297 | 0.028* | |
H4B | 0.6601 | 0.6633 | 0.4435 | 0.028* | |
C5 | 0.63441 (13) | 0.8296 (3) | 0.58441 (19) | 0.0333 (5) | |
H5A | 0.6948 | 0.8699 | 0.6086 | 0.050* | |
H5B | 0.6121 | 0.8653 | 0.6368 | 0.050* | |
H5C | 0.6012 | 0.9003 | 0.5197 | 0.050* | |
K1S | 0.5000 | −0.0201 (2) | 0.7500 | 0.0275 (3) | 0.2 |
N1S | 0.5000 | −0.0201 (2) | 0.7500 | 0.0275 (3) | 0.8 |
H1NS | 0.5139 (17) | −0.091 (4) | 0.8115 (14) | 0.033* | 0.8 |
H2NS | 0.5476 (13) | 0.052 (4) | 0.757 (2) | 0.033* | 0.8 |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cr1 | 0.00847 (19) | 0.01210 (19) | 0.0120 (2) | −0.00089 (12) | 0.00332 (13) | −0.00138 (12) |
O1 | 0.0173 (6) | 0.0248 (6) | 0.0209 (6) | −0.0064 (5) | 0.0018 (5) | 0.0078 (5) |
O2 | 0.0231 (7) | 0.0300 (7) | 0.0217 (7) | 0.0003 (5) | 0.0030 (5) | 0.0107 (5) |
O3 | 0.0201 (6) | 0.0223 (6) | 0.0290 (7) | −0.0052 (5) | 0.0130 (5) | −0.0119 (5) |
O4 | 0.0328 (8) | 0.0430 (9) | 0.0416 (9) | −0.0005 (7) | 0.0243 (7) | −0.0173 (7) |
N1 | 0.0110 (6) | 0.0145 (6) | 0.0134 (6) | −0.0023 (5) | 0.0050 (5) | −0.0013 (5) |
C1 | 0.0174 (8) | 0.0198 (8) | 0.0152 (8) | −0.0010 (6) | 0.0063 (6) | 0.0000 (6) |
C2 | 0.0205 (9) | 0.0530 (14) | 0.0160 (9) | −0.0150 (8) | −0.0018 (7) | 0.0125 (8) |
C3 | 0.0201 (8) | 0.0219 (8) | 0.0185 (9) | 0.0005 (6) | 0.0094 (6) | −0.0027 (6) |
C4 | 0.0203 (8) | 0.0327 (9) | 0.0226 (10) | −0.0081 (7) | 0.0148 (7) | −0.0083 (7) |
C5 | 0.0221 (9) | 0.0186 (9) | 0.0574 (14) | −0.0070 (7) | 0.0137 (9) | −0.0129 (8) |
K1S | 0.0277 (7) | 0.0278 (8) | 0.0270 (8) | 0.000 | 0.0107 (6) | 0.000 |
N1S | 0.0277 (7) | 0.0278 (8) | 0.0270 (8) | 0.000 | 0.0107 (6) | 0.000 |
Cr1—O1 | 1.9479 (13) | C2—H2B | 0.9800 |
Cr1—O1i | 1.9479 (13) | C3—C4 | 1.512 (2) |
Cr1—O3 | 1.9673 (12) | C3—K1Sii | 3.371 (2) |
Cr1—O3i | 1.9673 (12) | C4—H4A | 0.9800 |
Cr1—N1 | 2.0792 (14) | C4—H4B | 0.9800 |
Cr1—N1i | 2.0792 (14) | C5—H5A | 0.9700 |
O1—C1 | 1.284 (2) | C5—H5B | 0.9700 |
O1—K1S | 3.0524 (17) | C5—H5C | 0.9700 |
O2—C1 | 1.226 (2) | K1S—O2iii | 2.8484 (16) |
O2—K1S | 2.8485 (17) | K1S—O3iv | 2.9658 (16) |
O3—C3 | 1.296 (2) | K1S—O3ii | 2.9658 (16) |
O3—K1Sii | 2.9658 (16) | K1S—O4iv | 3.033 (2) |
O4—C3 | 1.219 (2) | K1S—O4ii | 3.033 (2) |
O4—K1Sii | 3.033 (2) | K1S—O1iii | 3.0524 (17) |
N1—C5 | 1.479 (2) | K1S—C1iii | 3.322 (2) |
N1—C4 | 1.486 (2) | K1S—C3ii | 3.371 (2) |
N1—C2 | 1.494 (2) | K1S—C3iv | 3.371 (2) |
C1—C2 | 1.508 (3) | N1S—H1NS | 0.920 (10) |
C1—K1S | 3.322 (2) | N1S—H2NS | 0.899 (10) |
C2—H2A | 0.9800 | ||
O1—Cr1—O1i | 180.00 (5) | O2—K1S—O3ii | 112.23 (4) |
O1—Cr1—O3 | 90.23 (6) | O3iv—K1S—O3ii | 100.26 (7) |
O1i—Cr1—O3 | 89.77 (6) | O2iii—K1S—O4iv | 150.81 (4) |
O1—Cr1—O3i | 89.77 (6) | O2—K1S—O4iv | 74.40 (4) |
O1i—Cr1—O3i | 90.23 (6) | O3iv—K1S—O4iv | 43.35 (4) |
O3—Cr1—O3i | 180.0 | O3ii—K1S—O4iv | 92.48 (6) |
O1—Cr1—N1 | 84.66 (6) | O2iii—K1S—O4ii | 74.40 (4) |
O1i—Cr1—N1 | 95.34 (6) | O2—K1S—O4ii | 150.82 (4) |
O3—Cr1—N1 | 82.62 (5) | O3iv—K1S—O4ii | 92.48 (6) |
O3i—Cr1—N1 | 97.38 (5) | O3ii—K1S—O4ii | 43.36 (4) |
O1—Cr1—N1i | 95.34 (6) | O4iv—K1S—O4ii | 115.53 (8) |
O1i—Cr1—N1i | 84.66 (6) | O2iii—K1S—O1iii | 43.90 (4) |
O3—Cr1—N1i | 97.38 (5) | O2—K1S—O1iii | 84.65 (6) |
O3i—Cr1—N1i | 82.62 (5) | O3iv—K1S—O1iii | 91.19 (4) |
N1—Cr1—N1i | 180.00 (7) | O3ii—K1S—O1iii | 154.19 (4) |
C1—O1—Cr1 | 117.20 (11) | O4iv—K1S—O1iii | 111.36 (5) |
C1—O1—K1S | 90.53 (10) | O4ii—K1S—O1iii | 113.71 (4) |
Cr1—O1—K1S | 152.23 (6) | O2iii—K1S—O1 | 84.65 (6) |
C1—O2—K1S | 101.75 (11) | O2—K1S—O1 | 43.90 (4) |
C3—O3—Cr1 | 116.48 (11) | O3iv—K1S—O1 | 154.19 (4) |
C3—O3—K1Sii | 96.63 (10) | O3ii—K1S—O1 | 91.19 (4) |
Cr1—O3—K1Sii | 142.48 (6) | O4iv—K1S—O1 | 113.71 (4) |
C3—O4—K1Sii | 95.27 (12) | O4ii—K1S—O1 | 111.36 (5) |
C5—N1—C4 | 109.69 (15) | O1iii—K1S—O1 | 88.15 (7) |
C5—N1—C2 | 110.46 (15) | O2iii—K1S—C1iii | 21.17 (4) |
C4—N1—C2 | 110.50 (15) | O2—K1S—C1iii | 98.43 (6) |
C5—N1—Cr1 | 113.95 (11) | O3iv—K1S—C1iii | 103.11 (4) |
C4—N1—Cr1 | 105.34 (10) | O3ii—K1S—C1iii | 131.52 (4) |
C2—N1—Cr1 | 106.75 (10) | O4iv—K1S—C1iii | 132.69 (5) |
O2—C1—O1 | 123.79 (16) | O4ii—K1S—C1iii | 93.56 (4) |
O2—C1—C2 | 119.04 (16) | O1iii—K1S—C1iii | 22.73 (4) |
O1—C1—C2 | 117.17 (15) | O1—K1S—C1iii | 85.72 (6) |
O2—C1—K1S | 57.08 (10) | O2iii—K1S—C1 | 98.43 (6) |
O1—C1—K1S | 66.74 (9) | O2—K1S—C1 | 21.17 (4) |
C2—C1—K1S | 175.95 (12) | O3iv—K1S—C1 | 131.52 (4) |
N1—C2—C1 | 114.11 (15) | O3ii—K1S—C1 | 103.11 (4) |
N1—C2—H2A | 108.7 | O4iv—K1S—C1 | 93.56 (4) |
C1—C2—H2A | 108.7 | O4ii—K1S—C1 | 132.69 (5) |
N1—C2—H2B | 108.7 | O1iii—K1S—C1 | 85.72 (6) |
C1—C2—H2B | 108.7 | O1—K1S—C1 | 22.73 (4) |
H2A—C2—H2B | 107.6 | C1iii—K1S—C1 | 92.12 (7) |
O4—C3—O3 | 123.62 (17) | O2iii—K1S—C3ii | 93.03 (5) |
O4—C3—C4 | 120.65 (16) | O2—K1S—C3ii | 133.81 (4) |
O3—C3—C4 | 115.66 (15) | O3iv—K1S—C3ii | 94.64 (6) |
O4—C3—K1Sii | 63.63 (11) | O3ii—K1S—C3ii | 22.45 (4) |
O3—C3—K1Sii | 60.92 (9) | O4iv—K1S—C3ii | 103.37 (7) |
C4—C3—K1Sii | 166.70 (13) | O4ii—K1S—C3ii | 21.10 (4) |
N1—C4—C3 | 112.21 (14) | O1iii—K1S—C3ii | 134.49 (4) |
N1—C4—H4A | 109.2 | O1—K1S—C3ii | 104.15 (4) |
C3—C4—H4A | 109.2 | C1iii—K1S—C3ii | 113.34 (5) |
N1—C4—H4B | 109.2 | C1—K1S—C3ii | 121.12 (4) |
C3—C4—H4B | 109.2 | O2iii—K1S—C3iv | 133.81 (4) |
H4A—C4—H4B | 107.9 | O2—K1S—C3iv | 93.03 (5) |
N1—C5—H5A | 109.5 | O3iv—K1S—C3iv | 22.45 (4) |
N1—C5—H5B | 109.5 | O3ii—K1S—C3iv | 94.64 (6) |
H5A—C5—H5B | 109.5 | O4iv—K1S—C3iv | 21.10 (4) |
N1—C5—H5C | 109.5 | O4ii—K1S—C3iv | 103.37 (7) |
H5A—C5—H5C | 109.5 | O1iii—K1S—C3iv | 104.15 (4) |
H5B—C5—H5C | 109.5 | O1—K1S—C3iv | 134.49 (4) |
O2iii—K1S—O2 | 111.01 (8) | C1iii—K1S—C3iv | 121.12 (4) |
O2iii—K1S—O3iv | 112.23 (4) | C1—K1S—C3iv | 113.34 (5) |
O2—K1S—O3iv | 110.35 (4) | C3ii—K1S—C3iv | 97.73 (8) |
O2iii—K1S—O3ii | 110.35 (4) | H1NS—N1S—H2NS | 105.9 (19) |
K1S—O2—C1—O1 | −1.9 (2) | K1Sii—O4—C3—C4 | −165.65 (16) |
K1S—O2—C1—C2 | 178.67 (16) | Cr1—O3—C3—O4 | −173.25 (15) |
Cr1—O1—C1—O2 | −179.97 (14) | K1Sii—O3—C3—O4 | −11.5 (2) |
K1S—O1—C1—O2 | 1.73 (19) | Cr1—O3—C3—C4 | 3.7 (2) |
Cr1—O1—C1—C2 | −0.5 (2) | K1Sii—O3—C3—C4 | 165.51 (14) |
K1S—O1—C1—C2 | −178.83 (16) | Cr1—O3—C3—K1Sii | −161.79 (12) |
Cr1—O1—C1—K1S | 178.30 (12) | C5—N1—C4—C3 | −151.02 (16) |
C5—N1—C2—C1 | 127.82 (19) | C2—N1—C4—C3 | 86.96 (18) |
C4—N1—C2—C1 | −110.61 (19) | Cr1—N1—C4—C3 | −27.99 (18) |
Cr1—N1—C2—C1 | 3.4 (2) | O4—C3—C4—N1 | −165.12 (17) |
O2—C1—C2—N1 | 177.29 (16) | O3—C3—C4—N1 | 17.8 (2) |
O1—C1—C2—N1 | −2.2 (3) | K1Sii—C3—C4—N1 | 89.7 (5) |
K1Sii—O4—C3—O3 | 11.2 (2) |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+1, −y, −z+1; (iii) −x+1, y, −z+3/2; (iv) x, −y, z+1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1S—H1NS···O3iv | 0.92 (1) | 2.07 (1) | 2.9658 (16) | 166 (3) |
N1S—H2NS···O2 | 0.90 (1) | 1.95 (1) | 2.8485 (17) | 175 (3) |
Symmetry code: (iv) x, −y, z+1/2. |
Acknowledgements
This work was supported by a grant from 2016 Research Funds of Andong National University. The X-ray crystallography experiment at PLS-II BL2D-SMC beamline was supported in part by MSIP and POSTECH.
References
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