research communications
H-benzo[d]imidazol-2-yl)phenoxy]phthalonitrile monohydrate
and Hirshfeld surface analysis of 4-[4-(1aUskudar University, Faculty of Engineering and Natural Sciences, Department of Forensic Science, 34662, Istanbul, Turkey, bOndokuz Mayıs University, Faculty of Arts and Sciences, Department of Physics, 55139, Kurupelit, Samsun, Turkey, cTaras Shevchenko National University of Kyiv, Department of Chemistry, 64 Vladimirska Str., Kiev 01601, Ukraine, and dSakarya University, Faculty of Arts and Sciences, Department of Chemistry, 54187 Sakarya, Turkey
*Correspondence e-mail: tiskenderov@ukr.net
In the title compound, C21H12N4O·H2O, the five-membered ring is essentially planar with a maximum deviation of 0.004 (2) Å. An N—H⋯O hydrogen bond connects the organic and water molecules. In the crystal, O—H⋯N hydrogen bonds link molecules into a two-dimensional network parallel to (100). Hirshfeld surface analyses and two-dimensional fingerprint plots were used to quantify the intermolecular interactions present in the crystal, indicating that the most important contributions for the crystal packing are from H⋯H (28.7%), C⋯H/H⋯C (27.1%), N⋯H/H⋯N (26.4%), C⋯N/N⋯C (6.1%), O⋯H/H⋯O (3.7%) and C⋯C (6.0%) interactions.
Keywords: crystal structure; benzimidazole; hydrogen bonding; Hirshfeld surfaces.
CCDC reference: 1849358
1. Chemical context
Benzimidazole derivatives, as nitrogen-containing aromatic ). They are widely used as antiulcer, antifungal and antimycobacterial compounds (Patil et al., 2008) and have also attracted attention as organic fluorescent chromophores in recent years (Verdasco et al., 1995). Phthalonitrile derivatives are widely used precursors for the preparation of phthalocyanines, an important class of molecules not only as commercial pigments but also as important functional materials in many areas (Sharman et al., 2003). The preparation of phthalocyanines is carried out by cyclotetramerization reactions of phthalonitriles. The development of benzimidazole derivative-substituted phthalocyanines from the related phthalonitriles is crucial in terms of achieving a combination of functional groups.
are a very important class owing to their biological importance (Preston, 2008We now report for the first time that benzimidazole groups linked directly through oxygen bridges to phthalonitrile units are new functionalized materials. We have described the synthesis, characterization and spectroscopic behavior of the synthesized starting phthalonitrile compound (Sen et al., 2018).
2. Structural commentary
The ). The five-membered ring is essentially planar with maximum deviations of 0.004 (2) Å for atom N2 and −0.004 (2) Å for C5 and the N1=C7, N1—C6 and C5—C6 bond lengths are 1.324 (3), 1.388 (3) and 1.391 (3) Å, respectively. The dihedral angle between the fused C1–C6 and C5/N2/C7/N1/C6 rings is 1.71 (13)° while the C8–C13 ring subtends a dihedral angle of 16.03 (12)° with the C5/N2/C7/N1/C6 ring plane. The C14–C19 ring makes a dihedral angle of 83.55 (11)° with the C8–C13 ring.
of the title compound contains one independent molecule and one water molecule (Fig. 13. Supramolecular features
In the crystal, an N2—H2⋯O2 hydrogen bond connects the organic and water molecules (Table 1). O2—H2C⋯N1 hydrogen bonds connect the molecules into a two-dimensional network parallel to (100) (Table 1, Fig. 2).
4. Hirshfeld surface analysis
Crystal Explorer17.5 (Turner et al., 2017) was used to analyse the interactions in the crystal. Figs. 3 and 4 show the Hirshfeld surfaces mapped over dnorm. with a fixed colour scale of −0.4353 (red) to 1.4359 (blue) a.u. where red spots indicate the regions of donor–acceptor interactions (Aydemir et al., 2018; Kansiz et al., 2018; Şen et al., 2017; Gümüş et al., 2018)·There are five red spots in the dnorm surface (Fig. 3); these represent the N-acceptor atoms involved in the interactions listed in Table 1.
The overall two-dimensional fingerprint plot and those showing different contacts are characterized in Fig. 5, together with their relative contributions to the Hirshfeld surface. H⋯H/H⋯H interactions, contributing 28.7% to the overall crystal packing, are some of the important interactions, and are shown in Fig. 6 as an end point that points to the origin with the tips at di = de = 1.1 Å. The C⋯H/H⋯C contacts in the structure, with a 27.1% contribution to the Hirshfeld surface, have a symmetrical distribution of points, with the tips at de + di = 2.7 Å. The contribution from the N⋯H/H⋯N contacts, corresponding to C—H⋯N and O—H⋯N interactions, is represented by a pair of sharp spikes characteristic of a strong hydrogen-bond interaction (26.4%). The O⋯H/H⋯O contacts, with a 3.7% contribution, appear with the points of low densities. Lastly, the C⋯N/N⋯C, C⋯C/C⋯C and O⋯C/C⋯O interactions in the structure with 6.1, 5.5 and 1.4% contributions, respectively, have symmetrical distributions of points.
5. Database survey
There are no direct precedents for the structure of the title compound in the crystallographic literature (Groom et al., 2016). However, there are several precedents for the 2-(4-hydroxyphenyl)benzimidazole, including 4-[4-(1-allyl-1H-benzo[d]imidazole-2yl)phenoxy]phthalonitrile (Sen et al., 2018), 4-(1H-benzo[d]imidazol-2-yl)phenol (Zhan et al., 2007), 2-(4-methoxyphenyl)-1H-benzimidazole (Moreno-Diaz et al., 2006) and 4-(1H-benzimidazol-2-yl)phenol (Zhou et al., 2006).
6. Synthesis and crystallization
The synthesis of the title compound (Fig. 7) was described by Sen et al. (2018). 4-[4-(1H-Benzo[d]imidazole-2yl)phenoxy]phthalonitrile, 4-nitrophthalonitrile (0.989 g, 5.71 mmol) and 2-(4-hydroxyphenyl)benzimidazole (1.2 g, 5.71 mmol) were dissolved in DMF (15 mL) under argon. After stirring for 15 min, anhydrous K2CO3 (0.790 g, 5.71 mmol) was added portionwise over 2 h with efficient stirring. The suspension was maintained at 333 K for 24 h. The progress of the reaction was monitored by TLC using a CHCl3/EtOAc (10/1) solvent system. After the reaction was observed to be complete, the resulting mixture was poured into an ice–water mixture. The immediate precipitate was collected by filtration, washed with hot water, ethanol and diethyl ether and dried in vacuo. The desired pure compound was obtained in sufficient purity, yield: 96% (1.84 g). m.p. 421 K.
7. Refinement
Crystal data, data collection and structure . The C-bound hydrogen atoms were included in calculated positions with C—H = 0.93 Å (aromatic) and allowed to ride, with Uiso(H) = 1.2Ueq(C).
details are summarized in Table 2Supporting information
CCDC reference: 1849358
https://doi.org/10.1107/S2056989018008745/qm2124sup1.cif
contains datablock I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2056989018008745/qm2124Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2056989018008745/qm2124Isup3.cml
Data collection: X-AREA (Stoe & Cie, 2004); cell
X-AREA (Stoe & Cie, 2004); data reduction: X-RED (Stoe & Cie, 2004); program(s) used to solve structure: WinGX (Farrugia, 2012); program(s) used to refine structure: SHELXL2017/1 (Sheldrick, 2015); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: WinGX (Farrugia, 2012) and PLATON (Spek, 2009).C21H12N4O·H2O | Dx = 1.339 Mg m−3 |
Mr = 354.36 | Mo Kα radiation, λ = 0.71073 Å |
Orthorhombic, Pbca | Cell parameters from 17763 reflections |
a = 8.7657 (6) Å | θ = 1.4–27.6° |
b = 27.285 (2) Å | µ = 0.09 mm−1 |
c = 14.6938 (13) Å | T = 296 K |
V = 3514.4 (5) Å3 | Stick, red |
Z = 8 | 0.79 × 0.39 × 0.18 mm |
F(000) = 1472 |
STOE IPDS 2 diffractometer | 3447 independent reflections |
Radiation source: sealed X-ray tube, 12 x 0.4 mm long-fine focus | 1829 reflections with I > 2σ(I) |
Detector resolution: 6.67 pixels mm-1 | Rint = 0.079 |
rotation method scans | θmax = 26.0°, θmin = 2.0° |
Absorption correction: integration (X-RED32; Stoe & Cie, 2004) | h = −10→10 |
Tmin = 0.967, Tmax = 0.988 | k = −33→33 |
33692 measured reflections | l = −18→18 |
Refinement on F2 | 0 restraints |
Least-squares matrix: full | Hydrogen site location: mixed |
R[F2 > 2σ(F2)] = 0.044 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.106 | w = 1/[σ2(Fo2) + (0.0484P)2] where P = (Fo2 + 2Fc2)/3 |
S = 0.91 | (Δ/σ)max < 0.001 |
3447 reflections | Δρmax = 0.21 e Å−3 |
251 parameters | Δρmin = −0.25 e Å−3 |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.69369 (16) | 0.65950 (6) | 0.29785 (11) | 0.0737 (5) | |
N2 | 0.2691 (2) | 0.46625 (6) | 0.26099 (13) | 0.0612 (5) | |
N1 | 0.3278 (2) | 0.47874 (7) | 0.11536 (11) | 0.0660 (5) | |
C15 | 0.4616 (2) | 0.70114 (8) | 0.34035 (13) | 0.0556 (5) | |
H15 | 0.401592 | 0.674922 | 0.321542 | 0.067* | |
C8 | 0.4411 (2) | 0.53611 (7) | 0.22666 (14) | 0.0570 (5) | |
C16 | 0.3945 (2) | 0.74273 (8) | 0.37607 (13) | 0.0555 (5) | |
N3 | 0.1021 (3) | 0.74647 (8) | 0.38612 (15) | 0.0877 (7) | |
C11 | 0.6078 (2) | 0.61778 (8) | 0.27451 (15) | 0.0617 (6) | |
C7 | 0.3485 (2) | 0.49377 (7) | 0.20015 (14) | 0.0575 (5) | |
C14 | 0.6179 (3) | 0.69884 (8) | 0.33284 (14) | 0.0595 (6) | |
C5 | 0.1905 (3) | 0.43125 (8) | 0.21300 (14) | 0.0598 (6) | |
C6 | 0.2289 (3) | 0.43919 (8) | 0.12231 (15) | 0.0626 (6) | |
C20 | 0.2314 (3) | 0.74515 (8) | 0.38237 (15) | 0.0629 (6) | |
C9 | 0.4841 (3) | 0.54391 (8) | 0.31609 (14) | 0.0636 (6) | |
H9 | 0.455684 | 0.521444 | 0.360562 | 0.076* | |
C17 | 0.4835 (3) | 0.78215 (8) | 0.40457 (14) | 0.0641 (6) | |
C10 | 0.5683 (3) | 0.58453 (9) | 0.34017 (15) | 0.0669 (6) | |
H10 | 0.597961 | 0.589294 | 0.400289 | 0.080* | |
O2 | 0.2249 (4) | 0.46945 (10) | 0.44787 (13) | 0.1486 (11) | |
H2B | 0.205614 | 0.441905 | 0.472290 | 0.223* | |
H2C | 0.175029 | 0.490023 | 0.479514 | 0.223* | |
C13 | 0.4861 (3) | 0.56973 (9) | 0.16191 (15) | 0.0728 (7) | |
H13 | 0.460140 | 0.564674 | 0.101255 | 0.087* | |
C19 | 0.7071 (3) | 0.73832 (10) | 0.35927 (16) | 0.0730 (7) | |
H19 | 0.812628 | 0.736903 | 0.353160 | 0.088* | |
C18 | 0.6397 (3) | 0.77925 (10) | 0.39428 (16) | 0.0796 (7) | |
H18 | 0.700081 | 0.805688 | 0.411514 | 0.095* | |
C1 | 0.1650 (3) | 0.40948 (9) | 0.05537 (17) | 0.0779 (7) | |
H1 | 0.189956 | 0.413927 | −0.005580 | 0.093* | |
C12 | 0.5683 (3) | 0.61047 (9) | 0.18562 (16) | 0.0729 (7) | |
H12 | 0.597142 | 0.633031 | 0.141412 | 0.087* | |
C21 | 0.4137 (3) | 0.82420 (10) | 0.44552 (17) | 0.0822 (8) | |
C4 | 0.0891 (3) | 0.39499 (8) | 0.23910 (17) | 0.0754 (7) | |
H4 | 0.063662 | 0.390196 | 0.299896 | 0.090* | |
N4 | 0.3579 (3) | 0.85731 (10) | 0.47866 (17) | 0.1136 (9) | |
C3 | 0.0277 (3) | 0.36651 (9) | 0.17176 (19) | 0.0827 (7) | |
H3 | −0.040521 | 0.341761 | 0.187190 | 0.099* | |
C2 | 0.0650 (3) | 0.37372 (9) | 0.08091 (19) | 0.0822 (7) | |
H2A | 0.021084 | 0.353825 | 0.036701 | 0.099* | |
H2 | 0.259 (3) | 0.4705 (9) | 0.3227 (17) | 0.085 (8)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0442 (9) | 0.0814 (11) | 0.0956 (11) | −0.0072 (9) | 0.0038 (8) | −0.0091 (9) |
N2 | 0.0693 (13) | 0.0588 (11) | 0.0555 (11) | 0.0030 (9) | 0.0003 (10) | 0.0023 (10) |
N1 | 0.0762 (13) | 0.0634 (12) | 0.0585 (11) | 0.0056 (10) | 0.0011 (10) | 0.0022 (9) |
C15 | 0.0494 (14) | 0.0554 (13) | 0.0620 (12) | −0.0078 (10) | −0.0041 (10) | −0.0002 (10) |
C8 | 0.0545 (13) | 0.0530 (13) | 0.0633 (13) | 0.0111 (11) | −0.0010 (10) | 0.0039 (10) |
C16 | 0.0581 (14) | 0.0553 (13) | 0.0532 (12) | −0.0051 (11) | −0.0036 (10) | 0.0025 (10) |
N3 | 0.0663 (15) | 0.0929 (16) | 0.1039 (17) | 0.0086 (13) | 0.0019 (13) | −0.0076 (12) |
C11 | 0.0458 (13) | 0.0665 (14) | 0.0728 (15) | 0.0047 (11) | 0.0039 (11) | −0.0020 (12) |
C7 | 0.0594 (14) | 0.0550 (13) | 0.0582 (13) | 0.0133 (11) | −0.0004 (11) | 0.0047 (10) |
C14 | 0.0536 (15) | 0.0676 (15) | 0.0572 (12) | −0.0049 (12) | 0.0003 (11) | −0.0017 (11) |
C5 | 0.0635 (15) | 0.0510 (12) | 0.0651 (13) | 0.0095 (12) | −0.0034 (11) | 0.0033 (11) |
C6 | 0.0676 (15) | 0.0568 (13) | 0.0632 (13) | 0.0097 (12) | −0.0030 (12) | 0.0003 (11) |
C20 | 0.0639 (17) | 0.0579 (14) | 0.0668 (14) | 0.0009 (12) | −0.0017 (13) | −0.0041 (11) |
C9 | 0.0660 (15) | 0.0651 (14) | 0.0597 (13) | 0.0066 (12) | 0.0051 (11) | 0.0027 (11) |
C17 | 0.0725 (17) | 0.0634 (15) | 0.0563 (12) | −0.0144 (13) | −0.0031 (11) | −0.0020 (11) |
C10 | 0.0606 (15) | 0.0779 (16) | 0.0620 (13) | 0.0063 (13) | 0.0017 (11) | −0.0049 (12) |
O2 | 0.264 (3) | 0.1188 (17) | 0.0633 (11) | −0.079 (2) | 0.0336 (15) | −0.0127 (11) |
C13 | 0.0824 (17) | 0.0731 (16) | 0.0628 (13) | −0.0058 (14) | −0.0087 (13) | 0.0085 (12) |
C19 | 0.0528 (15) | 0.098 (2) | 0.0683 (14) | −0.0241 (14) | −0.0033 (11) | −0.0065 (13) |
C18 | 0.085 (2) | 0.0824 (18) | 0.0709 (15) | −0.0335 (16) | −0.0013 (14) | −0.0168 (13) |
C1 | 0.0890 (18) | 0.0737 (16) | 0.0710 (15) | 0.0085 (15) | −0.0049 (14) | −0.0034 (13) |
C12 | 0.0713 (17) | 0.0743 (16) | 0.0731 (15) | −0.0070 (13) | −0.0037 (13) | 0.0125 (12) |
C21 | 0.112 (2) | 0.0648 (16) | 0.0694 (15) | −0.0126 (16) | −0.0029 (14) | −0.0104 (13) |
C4 | 0.0823 (18) | 0.0674 (15) | 0.0764 (15) | 0.0009 (14) | 0.0025 (14) | 0.0061 (13) |
N4 | 0.157 (2) | 0.0810 (16) | 0.1027 (18) | 0.0009 (17) | −0.0028 (17) | −0.0252 (14) |
C3 | 0.0792 (18) | 0.0662 (16) | 0.103 (2) | −0.0019 (13) | −0.0046 (16) | −0.0015 (15) |
C2 | 0.087 (2) | 0.0679 (17) | 0.0922 (19) | 0.0068 (15) | −0.0177 (16) | −0.0126 (14) |
O1—C14 | 1.363 (2) | C9—C10 | 1.378 (3) |
O1—C11 | 1.407 (2) | C9—H9 | 0.9300 |
N2—C7 | 1.359 (3) | C17—C18 | 1.379 (3) |
N2—C5 | 1.373 (3) | C17—C21 | 1.433 (4) |
N2—H2 | 0.92 (2) | C10—H10 | 0.9300 |
N1—C7 | 1.324 (3) | O2—H2B | 0.8500 |
N1—C6 | 1.388 (3) | O2—H2C | 0.8500 |
C15—C14 | 1.376 (3) | C13—C12 | 1.370 (3) |
C15—C16 | 1.382 (3) | C13—H13 | 0.9300 |
C15—H15 | 0.9300 | C19—C18 | 1.364 (3) |
C8—C13 | 1.379 (3) | C19—H19 | 0.9300 |
C8—C9 | 1.383 (3) | C18—H18 | 0.9300 |
C8—C7 | 1.465 (3) | C1—C2 | 1.364 (3) |
C16—C17 | 1.393 (3) | C1—H1 | 0.9300 |
C16—C20 | 1.435 (3) | C12—H12 | 0.9300 |
N3—C20 | 1.135 (3) | C21—N4 | 1.137 (3) |
C11—C12 | 1.366 (3) | C4—C3 | 1.368 (3) |
C11—C10 | 1.369 (3) | C4—H4 | 0.9300 |
C14—C19 | 1.387 (3) | C3—C2 | 1.388 (4) |
C5—C4 | 1.384 (3) | C3—H3 | 0.9300 |
C5—C6 | 1.391 (3) | C2—H2A | 0.9300 |
C6—C1 | 1.392 (3) | ||
C14—O1—C11 | 117.92 (16) | C18—C17—C16 | 118.6 (2) |
C7—N2—C5 | 107.66 (18) | C18—C17—C21 | 121.0 (2) |
C7—N2—H2 | 129.0 (15) | C16—C17—C21 | 120.4 (2) |
C5—N2—H2 | 123.1 (15) | C11—C10—C9 | 119.2 (2) |
C7—N1—C6 | 104.91 (18) | C11—C10—H10 | 120.4 |
C14—C15—C16 | 119.5 (2) | C9—C10—H10 | 120.4 |
C14—C15—H15 | 120.3 | H2B—O2—H2C | 104.5 |
C16—C15—H15 | 120.3 | C12—C13—C8 | 121.0 (2) |
C13—C8—C9 | 118.4 (2) | C12—C13—H13 | 119.5 |
C13—C8—C7 | 119.96 (19) | C8—C13—H13 | 119.5 |
C9—C8—C7 | 121.66 (19) | C18—C19—C14 | 119.8 (2) |
C15—C16—C17 | 120.7 (2) | C18—C19—H19 | 120.1 |
C15—C16—C20 | 119.1 (2) | C14—C19—H19 | 120.1 |
C17—C16—C20 | 120.2 (2) | C19—C18—C17 | 121.2 (2) |
C12—C11—C10 | 120.9 (2) | C19—C18—H18 | 119.4 |
C12—C11—O1 | 119.1 (2) | C17—C18—H18 | 119.4 |
C10—C11—O1 | 120.0 (2) | C2—C1—C6 | 118.7 (2) |
N1—C7—N2 | 112.18 (19) | C2—C1—H1 | 120.6 |
N1—C7—C8 | 124.8 (2) | C6—C1—H1 | 120.6 |
N2—C7—C8 | 122.99 (19) | C11—C12—C13 | 119.7 (2) |
O1—C14—C15 | 123.5 (2) | C11—C12—H12 | 120.2 |
O1—C14—C19 | 116.3 (2) | C13—C12—H12 | 120.2 |
C15—C14—C19 | 120.2 (2) | N4—C21—C17 | 179.4 (3) |
N2—C5—C4 | 132.6 (2) | C3—C4—C5 | 117.3 (2) |
N2—C5—C6 | 105.2 (2) | C3—C4—H4 | 121.4 |
C4—C5—C6 | 122.1 (2) | C5—C4—H4 | 121.4 |
N1—C6—C5 | 110.03 (19) | C4—C3—C2 | 121.5 (2) |
N1—C6—C1 | 130.7 (2) | C4—C3—H3 | 119.3 |
C5—C6—C1 | 119.3 (2) | C2—C3—H3 | 119.3 |
N3—C20—C16 | 178.8 (3) | C1—C2—C3 | 121.1 (2) |
C10—C9—C8 | 120.9 (2) | C1—C2—H2A | 119.4 |
C10—C9—H9 | 119.5 | C3—C2—H2A | 119.4 |
C8—C9—H9 | 119.5 | ||
C14—C15—C16—C17 | −0.1 (3) | C7—C8—C9—C10 | −178.5 (2) |
C14—C15—C16—C20 | 179.04 (19) | C15—C16—C17—C18 | 1.6 (3) |
C14—O1—C11—C12 | 99.2 (2) | C20—C16—C17—C18 | −177.6 (2) |
C14—O1—C11—C10 | −82.4 (2) | C15—C16—C17—C21 | −177.0 (2) |
C6—N1—C7—N2 | 0.1 (2) | C20—C16—C17—C21 | 3.8 (3) |
C6—N1—C7—C8 | −177.8 (2) | C12—C11—C10—C9 | −1.7 (3) |
C5—N2—C7—N1 | −0.5 (2) | O1—C11—C10—C9 | 179.93 (19) |
C5—N2—C7—C8 | 177.44 (19) | C8—C9—C10—C11 | 0.9 (3) |
C13—C8—C7—N1 | 14.5 (3) | C9—C8—C13—C12 | −1.4 (3) |
C9—C8—C7—N1 | −166.3 (2) | C7—C8—C13—C12 | 177.8 (2) |
C13—C8—C7—N2 | −163.2 (2) | O1—C14—C19—C18 | 179.5 (2) |
C9—C8—C7—N2 | 16.0 (3) | C15—C14—C19—C18 | 1.1 (3) |
C11—O1—C14—C15 | −4.8 (3) | C14—C19—C18—C17 | 0.4 (4) |
C11—O1—C14—C19 | 176.87 (19) | C16—C17—C18—C19 | −1.7 (4) |
C16—C15—C14—O1 | −179.49 (18) | C21—C17—C18—C19 | 176.9 (2) |
C16—C15—C14—C19 | −1.2 (3) | N1—C6—C1—C2 | −177.4 (2) |
C7—N2—C5—C4 | −177.5 (2) | C5—C6—C1—C2 | 0.7 (3) |
C7—N2—C5—C6 | 0.7 (2) | C10—C11—C12—C13 | 1.0 (3) |
C7—N1—C6—C5 | 0.4 (2) | O1—C11—C12—C13 | 179.3 (2) |
C7—N1—C6—C1 | 178.7 (2) | C8—C13—C12—C11 | 0.6 (4) |
N2—C5—C6—N1 | −0.7 (2) | N2—C5—C4—C3 | 178.5 (2) |
C4—C5—C6—N1 | 177.75 (19) | C6—C5—C4—C3 | 0.5 (3) |
N2—C5—C6—C1 | −179.20 (19) | C5—C4—C3—C2 | −0.2 (4) |
C4—C5—C6—C1 | −0.8 (3) | C6—C1—C2—C3 | −0.5 (4) |
C13—C8—C9—C10 | 0.7 (3) | C4—C3—C2—C1 | 0.2 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O2 | 0.92 (2) | 1.86 (3) | 2.774 (3) | 171 (2) |
O2—H2C···N1i | 0.85 | 2.17 | 2.876 (2) | 140 |
C15—H15···O1ii | 0.93 | 2.56 | 3.306 (2) | 137 |
C19—H19···N3iii | 0.93 | 2.60 | 3.491 (3) | 162 |
Symmetry codes: (i) −x+1/2, −y+1, z+1/2; (ii) x−1/2, y, −z+1/2; (iii) x+1, y, z. |
Acknowledgements
The authors acknowledge the Faculty of Arts and Sciences, Ondokuz Mayıs University, Turkey, for the use of the Stoe IPDS 2 diffractometer (purchased under grant F.279 of the University Research Fund).
References
Aydemir, E., Kansiz, S., Gumus, M. K., Gorobets, N. Y. & Dege, N. (2018). Acta Cryst. E74, 367–370. CrossRef IUCr Journals Google Scholar
Farrugia, L. J. (2012). J. Appl. Cryst. 45, 849–854. Web of Science CrossRef CAS IUCr Journals Google Scholar
Groom, C. R., Bruno, I. J., Lightfoot, M. P. & Ward, S. C. (2016). Acta Cryst. B72, 171–179. Web of Science CSD CrossRef IUCr Journals Google Scholar
Gümüş, M. K., Kansız, S., Aydemir, E., Gorobets, N. Y. & Dege, N. (2018). J. Mol. Struct. 1168, 280–290. Google Scholar
Kansiz, S., Almarhoon, Z. M. & Dege, N. (2018). Acta Cryst. E74, 217–220. Web of Science CSD CrossRef IUCr Journals Google Scholar
Moreno-Diaz, H., Navarrete-Vázquez, G., Estrada-Soto, S. & Tlahuext, H. (2006). Acta Cryst. E62, o2601–o2602. Web of Science CSD CrossRef IUCr Journals Google Scholar
Patil, A., Ganguly, S. & Surana, S. (2008). Rasayan J. Chem. 1, 447–460. Google Scholar
Preston, P. N. (2008). Benzimidazoles. In Chemistry of Heterocyclic Compounds, Part 1, Vol. 40, pp. 1–285. New York: John Wiley & Sons, Inc. Google Scholar
Sen, P., Atmaca, G. Y., Erdogmus, A., Kanmazalp, S. D., Dege, N. & Yildiz, S. Z. (2018). J. Lumin. 194, 123–130. Web of Science CrossRef Google Scholar
Şen, F., Kansiz, S. & Uçar, İ. (2017). Acta Cryst. C73, 517–524. Web of Science CSD CrossRef IUCr Journals Google Scholar
Sharman, W. M. & Lier, J. E. (2003). The Porphyrin Handbook, edited by K. M. Kadish, K. M. Smith K. M. & R. Guilard. New York: Academic Press. Google Scholar
Sheldrick, G. M. (2015). Acta Cryst. C71, 3–8. Web of Science CrossRef IUCr Journals Google Scholar
Spek, A. L. (2009). Acta Cryst. D65, 148–155. Web of Science CrossRef CAS IUCr Journals Google Scholar
Stoe & Cie (2004). IPDSI Bedienungshandbuch. Stoe & Cie GmbH, Darmstadt, Germany. Google Scholar
Turner, M. J., MacKinnon, J. J., Wolff, S. K., Grimwood, D. J., Spackman, P. R., Jayatilaka, D. & Spackman, M. A. (2017). Crystal Explorer17.5. University of Western Australia. Google Scholar
Verdasco, G., Martín, M. A., del Castillo, B., López-Alvarado, P. & Menéndez, J. C. (1995). Anal. Chim. Acta, 303, 73–78. CrossRef Web of Science Google Scholar
Zhan, Q.-G., Liu, M.-S., Zeng, R.-H., Yang, D.-Q. & Cai, Y.-P. (2007). Acta Cryst. E63, o3470. Web of Science CSD CrossRef IUCr Journals Google Scholar
Zhou, Z., Liu, C., Guo, H. & Cai, Y. (2006). Chem .J. Internet, 8, 65. Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.