research communications
of a homoleptic zinc(II) complex based on bis(3,5-diisopropylpyrazol-1-yl)acetate
aDepartment of Chemistry and Biochemistry, Boise State University, 1910 University Drive, Boise, ID 83725, USA
*Correspondence e-mail: ericbrown3@boisestate.edu
Deprotonation of the methylene group in bis(3,5-diisopropylpyrazol-1-yl)methane with nBuLi and reaction with carbon dioxide yields lithium bis(3,5-diisopropylpyrazol-1-yl)acetate (1). Treatment of 1 with ZnCl2 results in the compound bis[bis(3,5-diisopropylpyrazol-1-yl)acetato]zinc(II), [Zn(C20H31N4O2)2] (2), whose structure has monoclinic (P21/c) symmetry. The ZnII ion resides on an inversion center and is coordinated by two bis(3,5-diisopropylpyrazol-1-yl)acetate (bdippza) ligands. Each ligand facially coordinates the zinc center via κ3N,N′,O coordination modes to form a distorted octahedral complex with four pyrazole N atoms in the basal plane and two carboxylate O atoms in the axial sites.
Keywords: crystal structure; zinc; heteroscorpionate ligands.
CCDC reference: 1860544
1. Chemical context
The closely related zinc-containing enzymes thermolysin (Holland et al., 1995) and carboxypeptidase A (Rees et al., 1983) each contain an active site where a distorted tetrahedral zinc ion is coordinated to two histidine residues, a glutamate residue, and a water molecule. These enzymes catalyze the hydrolysis of peptide bonds containing hydrophobic residues with thermolysin selective for the amide bonds located on the N-terminal side of the polypeptide (Heinrikson, 1977), while carboxypeptidase A prefers the amide bonds on the C-terminal side (Lipscomb, 1970). However, questions remain concerning the mechanism of amide-bond hydrolysis by thermolysin and carboxypeptidase A. As such, the synthesis and study of model complexes that mimic the active-site structure and reactivity of these biological compounds is necessary to their further understanding.
In an attempt to model the two histidine and glutamate binding motifs present in thermolysin and carboxypeptidase A, the coordination chemistry of bis(3,5-diisopropylpyrazol-1-yl)acetate (bdippza) with zinc chloride was explored to determine if the steric demands of the anionic heteroscorpionate ligand were suitable to form a zinc complex of the form [(bdippza)ZnCl]. However, structural determination of the title compound identified the product not as the target compound but instead as the homoleptic zinc compound [(bdippza)2Zn] (2). Formation of 2 occurs regardless of the stoichiometric ratio and indicates that the steric environment of the bdippza ligand is too small to prevent complexation of two ligands per zinc ion. Spectroscopic characterization of 2 is consistent with the solid-state structure. For instance, identification of the acetate group is evident by a strong IR absorption at 1687 cm−1 and a 13C NMR signal at 165.8 ppm (the carbon peak of the carboxylate was identified by an HMBC experiment that showed a two-bond correlation between the proton of the bridging C atom and the C atom of the carboxylate). Furthermore, the positive-ion ESI–MS spectrum of 2 shows the presence of the [M + Na]+ ion, whose is in good agreement with the theoretical of the compound (see supporting information for ESI–MS spectra and 1D and 2D NMR spectra).
2. Structural commentary
The molecular structure of the title complex is shown in Fig. 1. Selected bond lengths and angles are given in Table 1. The ZnII ion resides on an inversion center and is coordinated by two bdippza ligands to form a six-coordinate complex. The two ligands facially bind the ZnII ion in a tridentate fashion, with four N atoms making up the basal plane of the distorted octahedron and the two carboxylate oxygens binding the ZnII at the remaining apical positions in a trans manner (O—Zn—O angle of 180.0°). The Zn—Npyrazole bond lengths range from 2.1674 (11) to 2.1942 (12) Å and the N—Zn—N angles of the basal plane range from 82.91 (4) to 97.09 (4)°. The apical O atoms are positioned approximately perpendicular to the basal plane, with angles that deviate slightly from 90° [O1—Zn1—N1 = 86.51 (4), O1—Zn1—N1i = 93.49 (4), O1—Zn1—N4 = 86.40 (4) and O1—Zn1—N4i = 93.60 (4)°]. The Zn—O bond length is 2.0471 (10) Å. The carbonyl oxygen of the carboxylate donor is tilted away from the zinc carboxylate plane, as indicated by the Zn1—O1—C8—C4 torsion angle of 20.61 (16)°. Complexation of the two bdippza ligands to the ZnII ion results in the formation of six six-membered metallocycles [Zn1–O1–C8–C4–N2–N1 (A), Zn1–O1–C8–C4–N3–N4 (B), Zn1–N1–N2–C4–N3–N4 (C), Zn1–O1i–C8i–C4i–N2i–N1i (D), Zn1–O1i–C8i–C4i–N3i–N4i (E), and Zn1–N1i–N2i–C4i–N3i–N4i (F)] that are all nonplanar. A ring-puckering analysis [puckering parameters are: Q = 0.9102 (12), θ = 85.76 (8)°, ψ = 346.77 (8)° for A, Q = 0.8809 (11), θ = 96.27 (8)°, ψ = 190.62 (8)° for B, Q = 0.9932 (11), θ = 80.32 (7)°, ψ = 350.91 (7)° for C, Q = 0.9102 (12), θ = 94.24 (8)°, ψ = 166.77 (8)° for D, Q = 0.8809 (11), θ = 83.73 (8)°, ψ = 10.62 (8)° for E, and Q = 0.9932 (11), θ = 99.68 (7)°, ψ = 170.91 (7)° for F] is consistent with each of the metallocycles being described as having a twist-boat conformation (Cremer et al., 1975). The dihedral angle between the mean planes of the two five-membered pyrazole rings found on the same bdippza ligand (Cg1 and Cg2) is 118.36°, while the dihedral angle between the mean planes of the imidazole rings Cg1 and Cg2i, which are on different bdippza ligands, is 61.64°.
3. Supramolecular features
Within the crystal, close intermolecular C—H⋯O contacts are present between molecules, which result in the molecules being packed in columns along the a axis. The weak C—H⋯O intermolecular contacts consist of the carboxylate oxygen (O2) at (x, y, z) acting as a hydrogen-bond acceptor to three C—H bonds (C4—H4, C12—H12, and C15—H15) on an adjacent complex at (−1 − x, −y, 1 − z), as shown in Fig. 2. Within each complex, weak π-stacking interactions between the imidazole rings (Cg1⋯Cg2) on the same bdippza ligand are observed. Furthermore, a weak slipped-parallel C—H⋯π (C9—H9⋯Cg2, X—H, π = 60°) interaction is present. Full details of the hydrogen-bonding geometries and π–π interactions are provided in Table 2.
4. Database survey
Three related homoleptic ZnII compounds containing different substituted bis(3,5-dialkylpyrazol-1-yl)acetate supporting ligands [bdmpza = bis(3,5-dimethylpyrazol-1-yl)acetate and bpatBu2,Me2 = 3,5-di-tert-butyl-1-(3,5-dimethyl-1H-pyrazol-1-yl)acetate] have been characterized crystallographically (Pockaj et al., 2015; Hegelmann et al., 2003; Beck et al., 2001). The Zn—O bond length in 2 [2.0472 (10) Å] is shorter compared to [(bdmpza)2Zn]·3H2O (Beck et al., 2001) and [(bdmpza)2Zn]·2H2O (Pockaj et al., 2015), which reported Zn—O bond lengths of 2.119 (3) and 2.100 (2) Å, respectively. The longer Zn—O bond lengths in the hydrated [(bdmpza)2Zn]·xH2O complexes are a consequence of O—H⋯H hydrogen-bonding interactions between the carboxylate carbonyl O atoms and cocrystallized water molecules that link adjacent coordination molecules to form infinite chains. Compound 2 does not contain cocrystallized water or solvent. Conversely, the Zn—O distance in 2 is longer by 0.04 Å compared to [(bpatBu2,Me2)2Zn] (Hegelmann et al., 2003), which has a Zn—O bond length of 2.006 (3) Å. The difference in bond lengths arises from [(bpatBu2,Me2)2Zn] having a distorted square-pyramidal environment instead of a distorted octahedral coordination due to one of the 3,5-di-tert-butylpyrazol-1-yl groups having a weak interaction with the zinc ion.
5. Synthesis and crystallization
5.1. General
All reactions were performed using standard Schlenk techniques under a nitrogen atmosphere. The tetrahydrofuran (THF) solvent was distilled from sodium/benzophenone ketyl, while methanol was distilled from CaH2. NMR spectra were recorded on a Bruker AVANCE III 600 NMR. Chemical shifts are expressed in parts per million (ppm) and referenced to residual solvent as the internal reference for 1H (CDCl3; δ = 7.24 ppm) and 13C (CDCl3; δ = 77.16 ppm). IR spectra were measured using a PerkinElmer Spectrum 100 spectrometer. Electrospray mass spectra were recorded on a Bruker HCTultra ETD II Bis(3,5-diisopropylpyrazol-1-yl)methane was prepared according to a previously reported procedure (Spiropulos et al., 2011).
5.2. Preparation of lithium bis(3,5-diisopropylpyrazol-1-yl)acetate, [Li(bdippza)] (1)
To a solution of bis(3,5-diisopropylpyrazol-1-yl)methane (0.5 g, 1.6 mmol) dissolved in dry THF (40 ml) was added nBuLi (1.6 M, 1.5 ml, 2.4 mmol) in hexane at 195 K. After 1 h of stirring, carbon dioxide was bubbled through the solution at 233 K for 30 min. The solution then was allowed to reach ambient temperature and stirred for 2 h before the volume was reduced to 3 ml under reduced pressure. Addition of hexane (10 ml) resulted in the formation of a white solid, which was filtered off, washed with hexane (2 × 5 ml) and dried under reduced pressure (0.27 g, 47%). 1H NMR (CDCl3): δ 6.59 (s, 1H), 5.80 (s, 2H), 3.06 (heptet, J = 6.8 Hz, 2H), 2.83 (heptet, J = 6.9 Hz, 2H), 1.31 (d, J = 6.8 Hz, 6H), 1.23 (d, J = 6.8 Hz, 6H), 1.05 (d, J = 6.9 Hz, 6H), 0.98 (d, J = 6.9 Hz, 6H). FT–IR (ATR, cm−1): 2966 (m), 2930 (m), 2870 (m), 1676 (m), 1643 (s), 1551 (m), 1458 (m), 1408 (m), 1373 (m), 1310 (m), 1284 (m), 1226 (m), 1181 (m), 1104 (m), 1073 (m), 1060 (m), 1012 (m), 912 (m), 861 (m), 792 (s), 771 (m), 738 (m), 723 (m), 686 (m). MS (ESI, neg): m/z found for [C20H31N4O2 −Li]−, 359; [C19H31N4 − Li − CO2]−, 315.
5.3. Preparation of [(bdippza)2Zn]
ZnCl2 (0.015 g, 0.11 mmol) was added to [Li(bdippza)] (1) (0.083 g, 0.23 mmol) in dry MeOH (15 ml). The reaction was stirred for 24 h, during which time a white solid formed. The solvent was removed under reduced pressure, dichloromethane (15 ml) was added, and the solution filtered through celite. The volume was reduced (∼3 ml) and addition of hexane (10 ml) caused the formation of a white solid. The solid was collected, washed with hexane (2 × 5 ml), and dried under vacuum (0.069 g, 78%). Colorless crystals suitable for crystallographic characterization were obtained by hexane diffusion into THF at room temperature. 1H NMR (CDCl3): δ 6.56 (s, 2H, CH), 6.00 (s, 4H, Hpz), 3.59–3.47 (m, 4H, CH-iPr), 3.02 (heptet, J = 6.8 Hz, 4H, CH-iPr), 1.37 (d, J = 6.8 Hz, 12H, CH3-iPr), 1.30 (d, J = 6.8 Hz, 12H, CH3-iPr), 1.19 (d, J = 6.9 Hz, 12H, CH3-iPr), 1.02 (d, J = 6.9 Hz, 12H, CH3-iPr). 13C NMR (CDCl3): δ 165.8 (CO2−), 163.9 (Cpz), 154.6 (Cpz), 99.6 (Cpz), 67.0 (CH), 27.2 (CH-iPr), 25.9 (CH-iPr), 23.3(CH3-iPr), 22.8 (CH3-iPr), 22.4 (CH3-iPr), 22.1 (CH3-iPr). FT–IR (ATR, cm−1): 2966 (m), 2932 (m), 2871 (m), 1687 (s, CO2−), 1552 (m, C=N), 1475 (m), 1460 (m), 1409 (m), 1356 (s), 1315 (m), 1292 (m), 1252 (m), 1184 (m), 1088 (m), 1059 (m), 1024 (m), 910 (m), 854 (m), 798 (s), 778 (s), 724 (m), 692 (s). MS (ESI, pos): m/z found for [C40H62N8O4Zn + Na]+, 805.
6. Refinement
Crystal data, data collection and structure .
details are summarized in Table 3
|
Supporting information
CCDC reference: 1860544
https://doi.org/10.1107/S2056989018011246/jj2201sup1.cif
contains datablock I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2056989018011246/jj2201Isup2.hkl
NMR (1H, 13C{1H}, HMBC, HSQC and COSY) and ESI-MS spectra for the titled compound are provided. DOI: https://doi.org/10.1107/S2056989018011246/jj2201sup3.pdf
Data collection: COLLECT (Nonius, 1998); cell
DENZO-SMN (Otwinowski & Minor, 1997); data reduction: DENZO-SMN (Otwinowski & Minor, 1997); program(s) used to solve structure: SIR97 (Altomare et al., 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: WinGX (Farrugia, 2012) and ORTEP-3 (Farrugia, 2012); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).[Zn(C20H31N4O2)2] | F(000) = 840 |
Mr = 784.35 | Dx = 1.221 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 8352 reflections |
a = 10.1806 (1) Å | θ = 1.0–20.4° |
b = 16.9578 (3) Å | µ = 0.62 mm−1 |
c = 12.4534 (2) Å | T = 150 K |
β = 96.9735 (10)° | Prism, colorless |
V = 2134.06 (6) Å3 | 0.25 × 0.18 × 0.13 mm |
Z = 2 |
Nonius KappaCCD diffractometer | 5072 independent reflections |
Radiation source: fine-focus sealed tube | 3881 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.033 |
Phi and ω scan | θmax = 27.9°, θmin = 2.4° |
Absorption correction: multi-scan (DENZO-SMN; Otwinowski & Minor, 1997) | h = −13→13 |
Tmin = 0.860, Tmax = 0.923 | k = −22→22 |
9825 measured reflections | l = −16→16 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.033 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.075 | All H-atom parameters refined |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0287P)2 + 0.6212P] where P = (Fo2 + 2Fc2)/3 |
5072 reflections | (Δ/σ)max < 0.001 |
365 parameters | Δρmax = 0.28 e Å−3 |
0 restraints | Δρmin = −0.41 e Å−3 |
Experimental. The program Denzo-SMN (Otwinowski & Minor, 1997) uses a scaling algorithm (Fox & Holmes, 1966) which effectively corrects for absorption effects. High redundancy data were used in the scaling program hence the 'multi-scan' code word was used. No transmission coefficients are available from the program (only scale factors for each frame). The scale factors in the experimental table are calculated from the 'size' command in the SHELXL-97 input file. |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Zn1 | 0.0000 | 0.0000 | 0.5000 | 0.01725 (8) | |
O1 | −0.17165 (10) | −0.05936 (6) | 0.44996 (8) | 0.0209 (2) | |
O2 | −0.39140 (10) | −0.04825 (7) | 0.41634 (9) | 0.0265 (3) | |
N1 | −0.11682 (11) | 0.10849 (7) | 0.47319 (9) | 0.0176 (3) | |
N2 | −0.23516 (11) | 0.10762 (7) | 0.51632 (9) | 0.0163 (3) | |
N3 | −0.20337 (11) | 0.00927 (7) | 0.65508 (9) | 0.0173 (3) | |
N4 | −0.06882 (11) | 0.00496 (7) | 0.65787 (9) | 0.0182 (3) | |
C1 | −0.10013 (14) | 0.18293 (9) | 0.44361 (12) | 0.0202 (3) | |
C2 | −0.20742 (15) | 0.22944 (9) | 0.46651 (13) | 0.0230 (3) | |
C3 | −0.29170 (14) | 0.18053 (9) | 0.51367 (12) | 0.0184 (3) | |
C4 | −0.28291 (14) | 0.03319 (9) | 0.55466 (11) | 0.0163 (3) | |
C5 | −0.24317 (15) | −0.01243 (9) | 0.75104 (11) | 0.0201 (3) | |
C6 | −0.12943 (16) | −0.02940 (10) | 0.81833 (12) | 0.0243 (3) | |
C7 | −0.02332 (15) | −0.01781 (9) | 0.75795 (12) | 0.0201 (3) | |
C8 | −0.28289 (14) | −0.03104 (9) | 0.46471 (11) | 0.0168 (3) | |
C9 | 0.02168 (16) | 0.20845 (10) | 0.39572 (14) | 0.0283 (4) | |
C10 | −0.0141 (2) | 0.26302 (13) | 0.29895 (17) | 0.0421 (5) | |
C11 | 0.11899 (19) | 0.24866 (13) | 0.48170 (18) | 0.0388 (5) | |
C12 | −0.41863 (15) | 0.19758 (10) | 0.55931 (13) | 0.0243 (3) | |
C13 | −0.48545 (18) | 0.27096 (11) | 0.50744 (18) | 0.0360 (4) | |
C14 | −0.3943 (2) | 0.20583 (13) | 0.68232 (15) | 0.0377 (4) | |
C15 | −0.38671 (16) | −0.02061 (11) | 0.76703 (13) | 0.0267 (4) | |
C16 | −0.4041 (2) | −0.01540 (17) | 0.88672 (15) | 0.0437 (6) | |
C17 | −0.4420 (2) | −0.09813 (14) | 0.71835 (18) | 0.0435 (5) | |
C18 | 0.12297 (15) | −0.02653 (10) | 0.79192 (13) | 0.0245 (3) | |
C19 | 0.18716 (18) | 0.05324 (12) | 0.81940 (16) | 0.0328 (4) | |
C20 | 0.1505 (2) | −0.08334 (12) | 0.88676 (16) | 0.0361 (4) | |
H2 | −0.2196 (16) | 0.2832 (10) | 0.4523 (13) | 0.024 (4)* | |
H4 | −0.3720 (16) | 0.0402 (9) | 0.5694 (12) | 0.018 (4)* | |
H6 | −0.1259 (16) | −0.0462 (10) | 0.8923 (14) | 0.027 (4)* | |
H9 | 0.0639 (17) | 0.1606 (11) | 0.3703 (14) | 0.031 (5)* | |
H10A | −0.079 (2) | 0.2389 (13) | 0.2427 (18) | 0.055 (6)* | |
H10B | 0.064 (2) | 0.2722 (12) | 0.2667 (17) | 0.052 (6)* | |
H10C | −0.0515 (19) | 0.3126 (12) | 0.3223 (16) | 0.043 (6)* | |
H11A | 0.1456 (19) | 0.2147 (12) | 0.5427 (16) | 0.041 (5)* | |
H11B | 0.197 (2) | 0.2639 (12) | 0.4482 (16) | 0.046 (6)* | |
H11C | 0.0797 (19) | 0.2952 (11) | 0.5102 (15) | 0.036 (5)* | |
H12 | −0.4765 (16) | 0.1549 (10) | 0.5438 (13) | 0.019 (4)* | |
H13A | −0.568 (2) | 0.2786 (11) | 0.5388 (15) | 0.044 (6)* | |
H13B | −0.504 (2) | 0.2641 (13) | 0.4277 (18) | 0.052 (6)* | |
H13C | −0.429 (2) | 0.3190 (12) | 0.5261 (15) | 0.044 (5)* | |
H14A | −0.479 (2) | 0.2095 (13) | 0.7118 (17) | 0.059 (6)* | |
H14B | −0.344 (2) | 0.1589 (12) | 0.7184 (15) | 0.043 (5)* | |
H14C | −0.342 (2) | 0.2497 (12) | 0.7026 (15) | 0.039 (5)* | |
H15 | −0.4339 (17) | 0.0219 (10) | 0.7318 (14) | 0.024 (4)* | |
H16A | −0.498 (2) | −0.0199 (13) | 0.8966 (17) | 0.054 (6)* | |
H16C | −0.3739 (19) | 0.0372 (12) | 0.9114 (15) | 0.036 (5)* | |
H16B | −0.358 (2) | −0.0561 (13) | 0.9265 (17) | 0.052 (6)* | |
H17A | −0.432 (2) | −0.0998 (12) | 0.6390 (17) | 0.051 (6)* | |
H17B | −0.392 (2) | −0.1428 (12) | 0.7557 (16) | 0.047 (6)* | |
H17C | −0.536 (2) | −0.1047 (13) | 0.7273 (17) | 0.055 (6)* | |
H18 | 0.1625 (16) | −0.0474 (10) | 0.7325 (13) | 0.023 (4)* | |
H19A | 0.1506 (17) | 0.0783 (10) | 0.8825 (15) | 0.032 (5)* | |
H19B | 0.285 (2) | 0.0461 (12) | 0.8343 (16) | 0.050 (6)* | |
H19C | 0.1748 (18) | 0.0875 (11) | 0.7587 (16) | 0.036 (5)* | |
H20A | 0.107 (2) | −0.1343 (13) | 0.8722 (16) | 0.046 (6)* | |
H20B | 0.117 (2) | −0.0619 (12) | 0.9539 (17) | 0.049 (6)* | |
H20C | 0.240 (2) | −0.0920 (12) | 0.9050 (16) | 0.048 (6)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Zn1 | 0.01007 (11) | 0.02354 (14) | 0.01834 (12) | 0.00096 (10) | 0.00251 (9) | −0.00057 (10) |
O1 | 0.0121 (5) | 0.0256 (6) | 0.0249 (5) | 0.0003 (4) | 0.0022 (4) | −0.0045 (4) |
O2 | 0.0128 (5) | 0.0374 (7) | 0.0286 (6) | −0.0035 (5) | 0.0005 (5) | −0.0088 (5) |
N1 | 0.0097 (6) | 0.0228 (7) | 0.0211 (6) | −0.0002 (5) | 0.0050 (5) | 0.0009 (5) |
N2 | 0.0094 (5) | 0.0213 (6) | 0.0185 (6) | −0.0001 (5) | 0.0031 (5) | −0.0006 (5) |
N3 | 0.0120 (5) | 0.0257 (7) | 0.0143 (6) | 0.0006 (5) | 0.0026 (5) | 0.0012 (5) |
N4 | 0.0116 (5) | 0.0247 (7) | 0.0181 (6) | 0.0016 (5) | 0.0007 (5) | −0.0001 (5) |
C1 | 0.0169 (7) | 0.0218 (8) | 0.0220 (8) | −0.0037 (6) | 0.0027 (6) | −0.0032 (6) |
C2 | 0.0221 (8) | 0.0167 (8) | 0.0305 (9) | −0.0017 (6) | 0.0045 (7) | −0.0029 (6) |
C3 | 0.0141 (7) | 0.0205 (8) | 0.0198 (7) | 0.0004 (6) | −0.0005 (6) | −0.0051 (6) |
C4 | 0.0098 (6) | 0.0223 (8) | 0.0171 (7) | −0.0004 (6) | 0.0027 (6) | 0.0023 (6) |
C5 | 0.0194 (7) | 0.0265 (9) | 0.0148 (7) | −0.0006 (6) | 0.0041 (6) | −0.0014 (6) |
C6 | 0.0248 (8) | 0.0330 (9) | 0.0149 (7) | 0.0014 (7) | 0.0011 (6) | 0.0006 (6) |
C7 | 0.0193 (7) | 0.0221 (8) | 0.0182 (7) | 0.0035 (6) | −0.0005 (6) | −0.0021 (6) |
C8 | 0.0143 (7) | 0.0201 (7) | 0.0166 (7) | −0.0018 (6) | 0.0042 (6) | 0.0038 (6) |
C9 | 0.0226 (8) | 0.0247 (9) | 0.0400 (10) | −0.0060 (7) | 0.0139 (8) | 0.0004 (7) |
C10 | 0.0447 (12) | 0.0462 (13) | 0.0372 (11) | −0.0198 (10) | 0.0127 (10) | 0.0036 (9) |
C11 | 0.0227 (9) | 0.0415 (12) | 0.0518 (13) | −0.0100 (9) | 0.0031 (9) | 0.0056 (10) |
C12 | 0.0159 (7) | 0.0238 (8) | 0.0341 (9) | −0.0004 (7) | 0.0064 (7) | −0.0072 (7) |
C13 | 0.0219 (9) | 0.0324 (10) | 0.0535 (13) | 0.0079 (8) | 0.0041 (9) | −0.0048 (9) |
C14 | 0.0342 (10) | 0.0455 (12) | 0.0352 (10) | 0.0055 (10) | 0.0110 (9) | −0.0117 (9) |
C15 | 0.0202 (8) | 0.0436 (11) | 0.0174 (7) | −0.0039 (7) | 0.0064 (7) | 0.0024 (7) |
C16 | 0.0268 (9) | 0.0835 (19) | 0.0223 (9) | −0.0041 (11) | 0.0093 (8) | 0.0009 (10) |
C17 | 0.0381 (11) | 0.0528 (14) | 0.0402 (12) | −0.0201 (10) | 0.0079 (10) | 0.0006 (10) |
C18 | 0.0205 (8) | 0.0310 (9) | 0.0206 (8) | 0.0072 (7) | −0.0031 (7) | −0.0043 (6) |
C19 | 0.0247 (9) | 0.0362 (10) | 0.0350 (10) | 0.0004 (8) | −0.0066 (8) | −0.0023 (8) |
C20 | 0.0341 (10) | 0.0375 (11) | 0.0330 (10) | 0.0086 (9) | −0.0110 (9) | 0.0033 (8) |
Zn1—O1i | 2.0471 (10) | C10—H10B | 0.94 (2) |
Zn1—O1 | 2.0472 (10) | C10—H10C | 0.98 (2) |
Zn1—N4 | 2.1674 (11) | C11—H11A | 0.96 (2) |
Zn1—N4i | 2.1675 (11) | C11—H11B | 0.98 (2) |
Zn1—N1 | 2.1941 (12) | C11—H11C | 0.971 (19) |
Zn1—N1i | 2.1942 (12) | C12—C13 | 1.524 (2) |
O1—C8 | 1.2640 (17) | C12—C14 | 1.528 (2) |
O2—C8 | 1.2275 (17) | C12—H12 | 0.938 (17) |
N1—C1 | 1.3317 (19) | C13—H13A | 0.98 (2) |
N1—N2 | 1.3774 (15) | C13—H13B | 0.99 (2) |
N2—C3 | 1.3625 (19) | C13—H13C | 1.01 (2) |
N2—C4 | 1.4539 (18) | C14—H14A | 0.98 (2) |
N3—C5 | 1.3583 (19) | C14—H14B | 1.02 (2) |
N3—N4 | 1.3680 (15) | C14—H14C | 0.93 (2) |
N3—C4 | 1.4623 (18) | C15—C16 | 1.525 (2) |
N4—C7 | 1.3330 (19) | C15—C17 | 1.526 (3) |
C1—C2 | 1.404 (2) | C15—H15 | 0.945 (18) |
C1—C9 | 1.503 (2) | C16—H16A | 0.98 (2) |
C2—C3 | 1.375 (2) | C16—H16C | 0.98 (2) |
C2—H2 | 0.933 (17) | C16—H16B | 0.94 (2) |
C3—C12 | 1.5016 (19) | C17—H17A | 1.01 (2) |
C4—C8 | 1.562 (2) | C17—H17B | 1.00 (2) |
C4—H4 | 0.954 (16) | C17—H17C | 0.98 (2) |
C5—C6 | 1.375 (2) | C18—C19 | 1.523 (2) |
C5—C15 | 1.505 (2) | C18—C20 | 1.524 (2) |
C6—C7 | 1.403 (2) | C18—H18 | 0.953 (16) |
C6—H6 | 0.960 (17) | C19—H19A | 1.004 (18) |
C7—C18 | 1.505 (2) | C19—H19B | 1.00 (2) |
C9—C10 | 1.528 (3) | C19—H19C | 0.949 (19) |
C9—C11 | 1.528 (3) | C20—H20A | 0.98 (2) |
C9—H9 | 0.988 (18) | C20—H20B | 1.01 (2) |
C10—H10A | 0.99 (2) | C20—H20C | 0.93 (2) |
O1i—Zn1—O1 | 180.0 | C9—C10—H10C | 110.5 (12) |
O1i—Zn1—N4 | 93.60 (4) | H10A—C10—H10C | 108.5 (18) |
O1—Zn1—N4 | 86.40 (4) | H10B—C10—H10C | 111.1 (17) |
O1i—Zn1—N4i | 86.40 (4) | C9—C11—H11A | 112.4 (12) |
O1—Zn1—N4i | 93.60 (4) | C9—C11—H11B | 108.1 (12) |
N4—Zn1—N4i | 180.0 | H11A—C11—H11B | 109.2 (16) |
O1i—Zn1—N1 | 93.49 (4) | C9—C11—H11C | 111.0 (12) |
O1—Zn1—N1 | 86.51 (4) | H11A—C11—H11C | 106.6 (16) |
N4—Zn1—N1 | 82.91 (4) | H11B—C11—H11C | 109.5 (16) |
N4i—Zn1—N1 | 97.09 (4) | C3—C12—C13 | 110.93 (14) |
O1i—Zn1—N1i | 86.51 (4) | C3—C12—C14 | 110.77 (14) |
O1—Zn1—N1i | 93.49 (4) | C13—C12—C14 | 111.10 (15) |
N4—Zn1—N1i | 97.09 (4) | C3—C12—H12 | 108.8 (9) |
N4i—Zn1—N1i | 82.91 (4) | C13—C12—H12 | 107.8 (10) |
N1—Zn1—N1i | 180.00 (3) | C14—C12—H12 | 107.4 (10) |
C8—O1—Zn1 | 121.05 (9) | C12—C13—H13A | 107.5 (12) |
C1—N1—N2 | 105.37 (11) | C12—C13—H13B | 110.4 (12) |
C1—N1—Zn1 | 138.76 (10) | H13A—C13—H13B | 110.0 (17) |
N2—N1—Zn1 | 114.54 (9) | C12—C13—H13C | 110.5 (12) |
C3—N2—N1 | 111.58 (11) | H13A—C13—H13C | 107.2 (15) |
C3—N2—C4 | 129.68 (11) | H13B—C13—H13C | 111.1 (16) |
N1—N2—C4 | 118.72 (11) | C12—C14—H14A | 109.7 (13) |
C5—N3—N4 | 111.59 (11) | C12—C14—H14B | 112.4 (11) |
C5—N3—C4 | 129.36 (12) | H14A—C14—H14B | 107.7 (16) |
N4—N3—C4 | 119.03 (11) | C12—C14—H14C | 111.3 (12) |
C7—N4—N3 | 105.81 (11) | H14A—C14—H14C | 110.2 (17) |
C7—N4—Zn1 | 136.30 (10) | H14B—C14—H14C | 105.3 (16) |
N3—N4—Zn1 | 114.33 (8) | C5—C15—C16 | 110.73 (14) |
N1—C1—C2 | 110.35 (13) | C5—C15—C17 | 110.12 (15) |
N1—C1—C9 | 121.44 (13) | C16—C15—C17 | 110.92 (16) |
C2—C1—C9 | 128.20 (14) | C5—C15—H15 | 108.4 (10) |
C3—C2—C1 | 106.80 (14) | C16—C15—H15 | 107.3 (10) |
C3—C2—H2 | 126.4 (10) | C17—C15—H15 | 109.3 (10) |
C1—C2—H2 | 126.8 (10) | C15—C16—H16A | 110.4 (13) |
N2—C3—C2 | 105.90 (12) | C15—C16—H16C | 106.8 (11) |
N2—C3—C12 | 123.10 (13) | H16A—C16—H16C | 107.8 (16) |
C2—C3—C12 | 130.97 (14) | C15—C16—H16B | 111.2 (13) |
N2—C4—N3 | 110.44 (11) | H16A—C16—H16B | 108.0 (18) |
N2—C4—C8 | 109.91 (11) | H16C—C16—H16B | 112.5 (18) |
N3—C4—C8 | 111.81 (12) | C15—C17—H17A | 109.8 (12) |
N2—C4—H4 | 108.6 (10) | C15—C17—H17B | 108.9 (12) |
N3—C4—H4 | 108.1 (9) | H17A—C17—H17B | 109.3 (16) |
C8—C4—H4 | 107.9 (10) | C15—C17—H17C | 111.7 (13) |
N3—C5—C6 | 105.89 (13) | H17A—C17—H17C | 108.7 (17) |
N3—C5—C15 | 122.65 (13) | H17B—C17—H17C | 108.4 (17) |
C6—C5—C15 | 131.26 (14) | C7—C18—C19 | 111.02 (14) |
C5—C6—C7 | 106.87 (13) | C7—C18—C20 | 111.26 (14) |
C5—C6—H6 | 125.2 (10) | C19—C18—C20 | 110.72 (14) |
C7—C6—H6 | 127.9 (10) | C7—C18—H18 | 108.4 (10) |
N4—C7—C6 | 109.81 (13) | C19—C18—H18 | 107.1 (10) |
N4—C7—C18 | 120.72 (13) | C20—C18—H18 | 108.2 (10) |
C6—C7—C18 | 129.46 (14) | C18—C19—H19A | 111.2 (10) |
O2—C8—O1 | 127.38 (14) | C18—C19—H19B | 109.0 (12) |
O2—C8—C4 | 116.06 (12) | H19A—C19—H19B | 111.2 (15) |
O1—C8—C4 | 116.56 (12) | C18—C19—H19C | 110.6 (11) |
C1—C9—C10 | 110.96 (15) | H19A—C19—H19C | 109.8 (15) |
C1—C9—C11 | 110.26 (14) | H19B—C19—H19C | 104.8 (16) |
C10—C9—C11 | 110.77 (15) | C18—C20—H20A | 112.2 (12) |
C1—C9—H9 | 107.6 (10) | C18—C20—H20B | 111.5 (12) |
C10—C9—H9 | 108.5 (10) | H20A—C20—H20B | 106.3 (16) |
C11—C9—H9 | 108.7 (10) | C18—C20—H20C | 111.9 (13) |
C9—C10—H10A | 112.5 (13) | H20A—C20—H20C | 108.7 (17) |
C9—C10—H10B | 107.7 (13) | H20B—C20—H20C | 105.9 (17) |
H10A—C10—H10B | 106.6 (17) | ||
O1i—Zn1—O1—C8 | 16 (15) | C1—C2—C3—C12 | 177.01 (15) |
N4—Zn1—O1—C8 | 53.53 (11) | C3—N2—C4—N3 | −109.26 (15) |
N4i—Zn1—O1—C8 | −126.47 (11) | N1—N2—C4—N3 | 72.21 (15) |
N1—Zn1—O1—C8 | −29.57 (11) | C3—N2—C4—C8 | 126.92 (15) |
N1i—Zn1—O1—C8 | 150.43 (11) | N1—N2—C4—C8 | −51.62 (16) |
O1i—Zn1—N1—C1 | 31.57 (15) | C5—N3—C4—N2 | 128.41 (15) |
O1—Zn1—N1—C1 | −148.43 (15) | N4—N3—C4—N2 | −53.40 (16) |
N4—Zn1—N1—C1 | 124.77 (15) | C5—N3—C4—C8 | −108.87 (16) |
N4i—Zn1—N1—C1 | −55.23 (15) | N4—N3—C4—C8 | 69.32 (15) |
N1i—Zn1—N1—C1 | −92 (11) | N4—N3—C5—C6 | 1.46 (17) |
O1i—Zn1—N1—N2 | −132.72 (9) | C4—N3—C5—C6 | 179.76 (14) |
O1—Zn1—N1—N2 | 47.28 (9) | N4—N3—C5—C15 | −173.97 (13) |
N4—Zn1—N1—N2 | −39.52 (9) | C4—N3—C5—C15 | 4.3 (2) |
N4i—Zn1—N1—N2 | 140.48 (9) | N3—C5—C6—C7 | −0.73 (17) |
N1i—Zn1—N1—N2 | 104 (11) | C15—C5—C6—C7 | 174.15 (16) |
C1—N1—N2—C3 | 0.03 (15) | N3—N4—C7—C6 | 1.08 (16) |
Zn1—N1—N2—C3 | 169.36 (9) | Zn1—N4—C7—C6 | −155.28 (12) |
C1—N1—N2—C4 | 178.82 (12) | N3—N4—C7—C18 | −178.12 (13) |
Zn1—N1—N2—C4 | −11.85 (15) | Zn1—N4—C7—C18 | 25.5 (2) |
C5—N3—N4—C7 | −1.60 (16) | C5—C6—C7—N4 | −0.23 (18) |
C4—N3—N4—C7 | 179.91 (12) | C5—C6—C7—C18 | 178.88 (15) |
C5—N3—N4—Zn1 | 160.70 (10) | Zn1—O1—C8—O2 | 159.40 (12) |
C4—N3—N4—Zn1 | −17.80 (15) | Zn1—O1—C8—C4 | −20.61 (16) |
O1i—Zn1—N4—C7 | −57.11 (15) | N2—C4—C8—O2 | −104.57 (14) |
O1—Zn1—N4—C7 | 122.89 (15) | N3—C4—C8—O2 | 132.40 (13) |
N4i—Zn1—N4—C7 | −160 (6) | N2—C4—C8—O1 | 75.44 (16) |
N1—Zn1—N4—C7 | −150.19 (15) | N3—C4—C8—O1 | −47.58 (16) |
N1i—Zn1—N4—C7 | 29.81 (15) | N1—C1—C9—C10 | 136.65 (16) |
O1i—Zn1—N4—N3 | 147.94 (9) | C2—C1—C9—C10 | −45.1 (2) |
O1—Zn1—N4—N3 | −32.06 (9) | N1—C1—C9—C11 | −100.24 (18) |
N4i—Zn1—N4—N3 | 45 (6) | C2—C1—C9—C11 | 78.0 (2) |
N1—Zn1—N4—N3 | 54.86 (9) | N2—C3—C12—C13 | −157.28 (15) |
N1i—Zn1—N4—N3 | −125.13 (9) | C2—C3—C12—C13 | 25.2 (2) |
N2—N1—C1—C2 | −0.58 (16) | N2—C3—C12—C14 | 78.85 (19) |
Zn1—N1—C1—C2 | −165.78 (11) | C2—C3—C12—C14 | −98.7 (2) |
N2—N1—C1—C9 | 177.97 (13) | N3—C5—C15—C16 | −159.12 (17) |
Zn1—N1—C1—C9 | 12.8 (2) | C6—C5—C15—C16 | 26.7 (3) |
N1—C1—C2—C3 | 0.91 (18) | N3—C5—C15—C17 | 77.8 (2) |
C9—C1—C2—C3 | −177.51 (15) | C6—C5—C15—C17 | −96.3 (2) |
N1—N2—C3—C2 | 0.52 (16) | N4—C7—C18—C19 | 79.98 (18) |
C4—N2—C3—C2 | −178.10 (13) | C6—C7—C18—C19 | −99.0 (2) |
N1—N2—C3—C12 | −177.54 (13) | N4—C7—C18—C20 | −156.22 (15) |
C4—N2—C3—C12 | 3.8 (2) | C6—C7—C18—C20 | 24.8 (2) |
C1—C2—C3—N2 | −0.84 (16) |
Symmetry code: (i) −x, −y, −z+1. |
Cg1 and Cg2 are the centroids of the N1/N2/C3/C2/C1 and N3/N4/C7/C6/C5 rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4···O2i | 0.95 | 2.44 | 3.3883 (18) | 172 |
C12—H12···O2i | 0.94 | 2.34 | 3.223 (2) | 156 |
C15—H15···O2i | 0.94 | 2.44 | 3.229 (2) | 141 |
Cg1···Cg2 | 4.2001 (9) | |||
C9—H9···Cg2 | 0.99 | 2.97 | 3.9410 (18) | 168 |
Symmetry code: (i) -x-1, -y, -z+1. |
Acknowledgements
We gratefully acknowledge Dr Atta M. Arif at the University of Utah for X-ray structural data collection and
The Boise State University NMR facility instrumentation was purchased through an NSF CRIF-MU/RUI grant and departmental funding.Funding information
Funding for this research was provided by: NSF CRIF-MU/RUI grant (grant No. 0639251, for the purchase of The Boise State University NMR facility instrumentation); National Science Foundation (grant No. 0923535, for support of
services); Institutional Development Awards (IDeA) from the National Institute of General Medical Sciences of the National Institutes of Health (grant Nos. P20GM103408 and P20GM109095).References
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