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September 2018 issue
research communications
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The crystal and molecular structure of 1,1′-formylruthenocene has been determined. The molecules self-assemble in a two-dimensional structure by C—H⋯O and C—H⋯π interactions with cisoid relative orientations of the two formyl groups.
CCDC reference: 1545792
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The synthesis and structural properties of a series of chromium tricarbonyl `piano-stool' complexes bearing substituted pentafulvene ligands were studied. Significant deviation of the exocyclic fulvene double bond from the cyclopentadiene plane accompanies coordination. Evidence of non-covalent π-π interactions was observed.
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The title molecule is twisted with the dihedral angle between the N-bound 4-cyanophenyl and C-bound acetyl groups of the 1,2,3-triazoyl ring being 60.82 (13)°. The molecular packing is sustained by carbonyl-C=O⋯π(triazoyl), cyano-C≡N⋯π(triazoyl) and π–π stacking interactions.
CCDC reference: 1859008
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In the title compound, the 2,5-dichlorothiophene and 2,4-dichlorophenyl rings, linked via a prop-2-en-1-one spacer, make a dihedral angle of 12.24 (15)°. Both the thiophene and benzene rings of adjacent molecules interact attractively in a face-to-face manner, forming zigzag sheets lying parallel to the (011) plane.
CCDC reference: 1036797
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The IrIII atom in the solvated title complex adopts a distorted octahedral geometry coordinated by two C,N-chelating 2,6-dimethyl-3-(pyridin-2-yl)pyridin-4-yl ligands and one O,O′-chelating 2,2,6,6-tetramethylheptane-3,5-dionate ligand. The title compound shows bright blue–green emission in solution at room temperature.
CCDC reference: 1859964
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In the crystal, classical N—H⋯N hydrogen bonds, weak C—H⋯O hydrogen bonds and weak C—H⋯π interactions link the molecules into a three-dimensional supramolecular network.
CCDC reference: 1852961
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The molecular structure of the first orally active carbapenem agent tebipenem pivoxil is described.
CCDC reference: 1816052
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The structure of a decaahydroacridine derivative with phenyl substituents at the 3- and 5-positions of the cyclohexenone rings is reported. An extensive range of O—H⋯O, C—H⋯O hydrogen bonds augmented by C—H⋯π(ring) hydrogen bonds an O⋯Br halogen bond and an unusual Br⋯π(ring) contact stabilizes the crystal packing.
CCDC reference: 1859007
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The new structural NiFe hydrogenase model [Ni(L′)FeCp*(CO)][PF6] [L′ = S—C(Me)=C(Me)—S—(CH2)3—S—C(Me)=C(Me)—S] is reported.
CCDC reference: 1859284
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In the title compound, the FeII cation is octahedrally coordinated by two dipa ligands and has crystallographic twofold symmetry. The nonplanar polynitrile tcpd2− anion is disordered about an inversion center.
CCDC reference: 1860212
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In hexaaquazinc(II) dinitrate 5-(pyridinium-3-yl)tetrazol-1-ide, the pyridinium and tetrazolide rings in the zwitterion are nearly coplanar. Several O—H⋯N and N—H⋯O hydrogen-bonding interactions exist between the [Zn(H2O)6]2+ cation and the N atoms of the tetrazolide ring, and between the nitrate anions and the N—H groups of the pyridinium ring, respectively, giving rise to a three-dimensional network.
CCDC reference: 1860162
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A crystal structure of the osmole complex (μ-η4-C4Ph4)Os2(CO)6 revealed an eclipsed sawhorse molecular geometry with no bridging or semi-bridging carbonyl ligands.
CCDC reference: 1847589
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The title compound is a novel halogen-substituted hydrazine derivative. Intramolecular N—H⋯O interactions form S(6) graph-set motifs, while C—H⋯O and C—H⋯N interactions form S(5) graph-set motifs.
CCDC reference: 1860856
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The crystal structures of hydrothermally synthesized RbGa(HAsO4)2 and RbGa2As(HAsO4)6 were solved by single-crystal X-ray diffraction. They both crystallize in related Rc structure types, one of which contains AsO6 octahedra assuming the topological role of M3+O6 octahedra.
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The dinuclear complex [(bpy)(Cl)Ru(tppz)Ru(Cl)(bpy)](PF6)2 has been synthesized as a catalyst precursor and characterized by X-ray crystallography and cyclic voltammetry.
CCDC reference: 1860573
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The title molecule adopts the shape of the letter L as the dihedral angle between the pyridyl rings is 78.37 (5)°. Linear supramolecular chains are found in the crystal mediated by weak carbonyl-C=O⋯π(triazolyl) interactions.
CCDC reference: 1861657
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The compound [(bdippza)2Zn], where bdippza is bis(3,5-diisopropylpyrazol-1-yl)acetate, possesses inversion symmetry and the ZnII atom is located on the special position of the P21/c space group. The zinc atom is coordinated by two bdippza ligands resulting in a six-coordinate distorted octahedral geometry.
CCDC reference: 1860544
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In the crystal, the fumarate dianions bridge the NiII cations into polymeric chains propagating along the [101] direction; these polymeric chains are further linked by O—H⋯O, N—H⋯O and C—H⋯O hydrogen bonds, forming a three-dimensional supramolecular architecture.
CCDC reference: 1563283
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The influence of the substituents in the crystals of the title compounds has not made any significant effect on the crystal packing and intermolecular hydrogen bonds. The validity of chlorine–methyl exchange rule is confirmed.
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The asymmetric unit of the title disubstituted 2,3′-bipyridine, contains four independent molecules (namely, A, B, C and D). The conformations of the molecules differ, as seen from the dihedral angles between the two pyridine rings in each molecule. They vary from 5.51 (9)° for molecule B to 25.25 (8)° for molecule A.
CCDC reference: 1862117
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The crystal structures of two aromatic amines are presented: a hydrogen-bonded brominated aniline, and a piperizine derivative.
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A new macrocycle obtained by the Michael reaction of azacrown ether with dimethyl acetylenedicarboxylate was studied by X-ray diffraction, and its potential bioactivity was estimated from the structural data.
CCDC reference: 1862265
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The synthesis and crystal structure of 5,10,15,20-tetrakis α,α,α,α 2-aminophenyl zinc(II) porphyrin is reported, which is a potent starting material for the synthesis of several other picket fence porphyrins.
CCDC reference: 1859612
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In the crystal structure of the title salt, the cations, anions and water molecules are linked into a three-dimensional network, which forms cross layers parallel to the (120) and (20) planes via O—H⋯Br, N—H⋯Br and N—H⋯N hydrogen bonds. C—H⋯π interactions also help in the stabilization of the molecular packing.
CCDC reference: 1837127
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Two of the constituent molecules in bis(3-carbamoylpyridin-1-ium) phosphite monohydrate, i.e. the phosphite anion and the water molecule, are situated on the symmetry plane. The molecules are held together by moderate N—H⋯O and O—H⋯N, and weak O—H⋯O and C—H⋯Ocarbonyl hydrogen bonds in which the primary and secondary amine and water H atoms are involved. The H atom directly bonded to the P atom avoids hydrogen bonding, as usual.
CCDC reference: 1860376
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The molecular and crystal structures of methyl 4-methyl-2,2-dioxo-1H-2λ6,1-benzothiazine-3-carboxylate, which possesses analgesic properties, have been determined
CCDC reference: 1861156
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Two chalcones were synthesized in Claisen–Schmidt condensation reactions. In the crystals, π–π interactions and weak C—H⋯O and C—H⋯π interactions are observed. The effect of these intermolecular interactions in the solid state can be seen inthe difference between the experimental and theoretical optimized geometrical parameters.
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The asymmetric unit of the adduct contains a neodymium(III) cation, three coordinated nitrate anions, four coordinated water molecules and three uncoordinated neutraltriazine molecules. The crystal structure consists of a three-dimensional supramolecular framework held together by a network of O—H⋯O and O—H⋯N hydrogen bonds between the coordinated water molecules, nitrate ions and triazine molecules. The uncoordinated neutral triazine moieties form N—H⋯N hydrogen bonds. Hirshfeld surface and fingerprint plots identify the major contributors to the intermolecular interactions.
CCDC reference: 1583097
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The title salt, Na+·C6H13O9S− [systematic name: sodium (1S,2S,3S,4R,5R)-1,2,3,4,5,6-hexahydroxyhexane-1-sulfonate], is formed by reaction of D-mannose with sodium bisulfite (sodium hydrogen sulfite) in water. The carbohydrate anions are arranged in a head (–SO3−) to head (–SO3−) arrangement, thereby forming two parallel sheets linked through coordination to sodium ions, with each component sheet containing intermolecular hydrogen bonds between the anionic residues. Unusually, the double sheets are not connected to neighbouring sets of double sheets, either by ion coordination or intermolecular hydrogen bonding.
CCDC reference: 1862155
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The naphthoquinone unit in 2-hydroxy-3-(prop-2-yn-1-yl)naphthalene-1,4-dione is essentially planar and the linear propargyl group is nearly perpendicular to the naphthalene ring system. In the crystal, O—H⋯O and C—H⋯O hydrogen bonds form an infinite tape structure.
CCDC reference: 1862442
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Metathesis of 2-, 3- and 4-cyano-1-methylpyridinium iodide with KPF6 in water generated the corresponding hexafluoridophosphate salts, C7H7N2+·PF6−, whose crystal structures were determined. They feature a variety of weak interactions (C—H⋯F hydrogen bonds and P—F⋯π interactions). Dispersion-corrected density functional theory (DFT-D) calculations were carried out in order to elucidate some of the energetic aspects of the solid-state structures.
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The structures and absolute stereochemistry of two pairs of diastereomeric nitrogen mustards related to the chemotherapeutic cyclophosphamide were determined to test 31P NMR chemical shift trends proposed based on the spatial relationship of the bis(2-chloroethyl)amine moiety and the chiral substituent of the amino alcohol.
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The structure of the pseudopolymorph of 3-(triphenylphosphoranylidene)-2,5-dihydrofuran-2,5-dione with a THF solvent molecule is described. The compound has a hydrogen-bonded layer structure, and displays C—H⋯O hydrogen bonds connecting molecules of the dihydrofuran-2,5-dione derivative into chains.
CCDC reference: 1862873
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In the crystal, the CdII atom, located on a twofold rotation axis, is coordinated by three chelating ligands, leading to a distorted octahedral CdN4O2 coordination sphere.
CCDC reference: 1534110
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A large number of structural determinations of compounds containing 2-hydroxy-3,5-dinitrobenzoic acid and its various deprotonated forms, 2-hydroxy-3,5-dinitrobenzoate or 2-carboxy-4,6-dinitrophenolate, are biased. The reason for the bias follows from incorrectly applied constraints or restraints on the bridging hydrogen, which is involved in the intramolecular hydrogen bond between the neighbouring carboxylic/carboxylate and oxo/hydroxy groups. The present article examines the problem of the location and refinement of such a bridging hydrogen in a number of reported compounds. The analysis of the intramolecular hydrogen bonding is also discussed.
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The two orthophosphates, Na1.85Mg1.85In1.15(PO4)3 and Ag1.69Mg1.69In1.31(PO4)3 adopt alluaudite-type structures. Edge-sharing [(In,Mg)O6] octahedra are linked together by PO4 tetrahedra, leaving channels in which the Na+ or Ag+ cations are situated..
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The molecular and crystal structure of trimethyl citrate is reported. The formation of inversion is the principal contributor to the crystal packing.
CCDC reference: 1500726
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Single crystals of Ti8Bi9O0.25 were grown by using a Bi flux and were investigated in order to clarify the structural changes by O atom occupation at the interstital site in the Ti4 tetrahedron.
CCDC reference: 1863407
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The title complex is assumed to have formed via the insertion of formaldehyde into the copper–carbon bond in an N-heterocyclic carbene complex of copper(I) chloride·The Cu—O bond lengths are shorter than those previously reported in structures with the same central Cu2O2 motif. The complex displays C—H⋯Cl interactions involving the H atoms of the heterocycle backbone and the chloride ligands of a neighbouring molecule.
CCDC reference: 1863799
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In the triclinic crystal form, the molecules are linked by hydrogen bonds into an infinite assembly propagating along the a axis; hydrophobic tert-butyl and phenyl groups form an external coating of the assembly.
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The structure is reported of a complex containing a trinuclear Zn cation lying on a crystallographic twofold axis. It consists of a tetrahedral ZnII atom bridging two six-coordinate ZnII atoms in which the two terminal ZnII cations adopt distorted octahedral geometries and the central ZnII cation adopts a distorted tetrahedral geometry.
CCDC reference: 1863971
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The mononuclear discrete complex [Cu(pivHA)2] contains two pivaloyl hydroxamates (pivHA−) coordinated to a copper(II) ion in a centrosymmetric trans mode through hydroxamate and carbonyl O atoms. The copper(II) O4 coordination is square planar.
CCDC reference: 1864482