research communications
accessof bis{3-(benzo[d][1,3]dioxol-5-yl)-5-[6-(1H-pyrazol-1-yl)pyridin-2-yl]-4H-1,2,4-triazol-4-ido}nickel(II) methanol disolvate
aDepartment of Chemistry, Taras Shevchenko National University of Kyiv, Volodymyrska Street 64, Kyiv, 01601, Ukraine, bDepartment of Inorganic Polymers, "Petru Poni" Institute of Macromolecular, Chemistry, Romanian Academy of Science, Aleea Grigore Ghica Voda 41-A, Iasi, 700487, Romania, cWimbleAI Inc., 548 Market Street, Unit 55559, San Francisco, California, USA, and dChemBioCenter, Kyiv National Taras Shevchenko University, Kyiv 02094, 61 Winston Churchill Street, Ukraine
*Correspondence e-mail: [email protected]
The of the title compound, [Ni(C17H11N6O2)2]·2CH3OH, consists of a neutral complex and two methanol molecules. In the complex, the two tridentate 2-[3-(benzo[d][1,3]dioxol-5-yl)-1H-1,2,4-triazol-5-yl]-6-(1H-pyrazol-1-yl)pyridine ligands coordinate to the central NiII ion through nitrogen atoms of the pyrazole, pyridine and triazole groups, forming a pseudooctahedral coordination sphere. Neighbouring molecules are linked through weak C—H(pz)⋯π(ph) interactions into monoperiodic chains, which are further linked through weak C–H⋯H/N/C interactions into diperiodic layers. The intermolecular contacts were quantified using Hirshfeld surface analysis and two-dimensional fingerprint plots, revealing the relative contributions of the contacts to the crystal packing to be H⋯H 38.4%, C⋯H/H⋯C 25.3%, N⋯H/H⋯N 14.1%, and O⋯H/H⋯O 11.8%. The average Ni—N bond distance is 2.085 Å. Energy framework analysis at the HF/3–21 G theory level was performed to quantify the interaction energies in the crystal structure.
CCDC reference: 2477384
1. Chemical context
A broad class of coordination compounds is represented by 3d-metal complexes based on tridentate bisazolepyridine ligands (Halcrow et al., 2019
; Suryadevara et al., 2022
), which find application in many fields, for example in catalysis (Xing et al., 2014
; Wei et al., 2015
) and molecular magnetism (Suryadevara et al., 2022
). In the case of asymmetric ligand design, where one of the azole groups carries a hydrogen on a nitrogen heteroatom and acts as a Brønsted acid, deprotonation can produce neutral complexes (Seredyuk et al., 2014
; Grunwald et al., 2023
). The periphery of the molecule, i.e. ligand substituents, also plays an important role, determining the way the molecules interact with each other, influencing the intermolecular connectivity, interaction energy and the organization of the structure.
Encouraged by our results in spin-transition complexes of 3d-metals formed by N-heterocyclic ligands (Seredyuk et al., 2006
, 2007a
,b
, 2024a
; Piñeiro-López et al., 2018
), we report here a new neutral NiII complex based on the asymmetric deprotonated ligand 2-[3-(benzo[d][1,3]dioxol-5-yl)-1H-1,2,4-triazol-5-yl)-6-(1H-pyrazol-1-yl]pyridine, which continues our lasting project on the study of 3d-metal complexes of bisazolepyridines and related organic polydentate ligands.
2. Structural commentary
The complex has a conical structure with the nickel(II) residing on twofold rotation axis and half of the formula in the The phenyl ring of the benzodioxole moiety of the ligand is rotated by 18.6 (1)° relative to the almost planar pyrazole-pyridine-triazole (pz-py-trz) fragment. The independent methanol molecule forms an O—H⋯N hydrogen bond with the trz ring of the ligand molecule (Fig. 1
). The central Ni ion of the complex has a distorted octahedral N6 coordination environment formed by the nitrogen donor atoms of the two tridentate ligands. The average Ni—N bond length is 2.085 Å. Distortion indices were calculated to assess how much the deviates from ideal octahedral geometry. The average trigonal distortion parameters Σ = Σ112(|90 − φi|), where φi refers to the twelve cis angles N—Ni—N′ (Drew et al., 1995
), and Θ = Σ124(|60 − θi|), where θi is the angle generated by superposition of two opposite faces of an octahedron (Chang et al., 1990
) are 117.2 and 391.6°, respectively. The values reveal a deviation of the coordination environment from an ideal octahedron (where Σ = Θ = 0), which is, however, in the expected range for bisazolepyridine and similar ligands (see below). The calculated continuous shape measure [CShM(Oh)] value relative to the ideal octahedral symmetry is 3.599 (Kershaw Cook et al., 2015
). The volume of the [NiN6] coordination polyhedron is 11.431 Å3.
| | Figure 1 The molecular structure in the asymmetric unit of the title compound and contact atoms with displacement ellipsoids drawn at the 50% probability level. The strong O—H⋯N (red) and weak C–H⋯N/C/O (cyan) hydrogen bonds are shown with the nearest neighbours. Symmetry codes: (i) 1 − x, 1 + y, |
3. Supramolecular features
Owing to the small head-group and large planar substituent at the tail, adjacent complex molecules are interlocked and interact via a weak, off-centre, almost perpendicular (83.6°) C—H(pz)⋯π(ph) intermolecular contact between the pyrazole (pz) and phenyl (ph) groups with distances H2/C2⋯Cg(ph) = 2.68/3.580 (4) Å. The formed monoperiodic supramolecular chains extend along the b-axis direction with the stacking periodicity equal to 10.4956 (4) Å (= cell parameter b) (Fig. 2
). Through weak intermolecular C—H(pz, py)⋯N/C interactions in the range 3.270 (4)–3.732 (5) Å (Table 1
), neighbouring chains are joined into corrugated diperiodic layers in the ab plane. The layers stack without strong interlayer interactions below the van der Waals radii; however, the solvent molecules occupying voids between the layers participate in the bonding between separate layers. The methanol molecule forms a strong O—H⋯N hydrogen bond with the deprotonated trz group and weak C—H⋯O hydrogen bonds with the CH2 group of the benzodioxole moiety belonging to a molecule in a neighbouring chain. A list of the considered hydrogen-bonding intermolecular interactions is provided in Table 1
.
|
| Figure 2 (a) A fragment of monoperiodic supramolecular column formed by stacking of molecules along the b axis; (b) supramolecular diperiodic layers formed by stacking of the supramolecular columns in the ab plane (for a better representation, each column has a different colour); (c) stacking of the diperiodic layers along the b-axis direction with the methanol molecules in the voids. |
A Hirshfeld surface analysis was performed and the associated two-dimensional fingerprint plots were generated using CrystalExplorer 21.5 (Spackman et al., 2021
), with a standard resolution of the three-dimensional dnorm surfaces (Fig. 3
a). The pale-red spots symbolize short contacts and negative dnorm values on the surface corresponding to the interactions described above. The electrostatic calculated using the HF/3-21G basis set is mapped on the Hirshfeld surface (Fig. 3
b). The negative charge localizes on the trz-ph moieties of the molecules, while the pz-py moieties are relatively positively charged. The two-dimensional fingerprint plots, with their relative contributions to the Hirshfeld surface mapped over dnorm, are shown for the H⋯H, C⋯H/H⋯C, N⋯H/H⋯N and O⋯H/H⋯O contacts in Fig. 4
. At 38.4%, the largest contribution to the overall crystal packing is from H⋯H interactions, which are located in the middle region of the fingerprint plot. C⋯H/H⋯C contacts contribute 25.3%, and O⋯H/H⋯O 11.8%, resulting in pairs of characteristic wings. The N⋯H/H⋯N contacts, represented by a pair of sharp spikes in the fingerprint plot, make a 14.1% contribution to the surface.
| | Figure 3 (a) A projection of dnorm mapped on the Hirshfeld surface identifying contact points or areas for intermolecular interactions on the molecule. Red/blue and white areas represent regions where contacts are shorter/larger than the sum and close to the sum of the van der Waals radii, respectively. (b) Electrostatic potential for the title compound mapped on the Hirshfeld surface. Red/blue and white areas represent regions where the charge is negative/positive or close to zero. |
| Figure 4 (a) Decomposition of the two-dimensional fingerprint plot into specific interactions. (b) A projection of dnorm mapped on the Hirshfeld surfaces, showing the specific intermolecular interactions on the molecule. |
The energy framework (Spackman et al., 2021
), calculated using the wave function at the HF/3-21G theory level, including the electrostatic (Eele), polarization (Epol), dispersion (Edis), repulsion (Erep) forces, and the total energy diagrams (Etot), is shown in Fig. 5
. The cylindrical radii, adjusted to the same scale factor of 100, are proportional to the relative strength of the corresponding energies. The major contribution is due to dispersion forces (Edis), reflecting dominating interactions in the crystal of the neutral molecules. The topology of the energy framework resembles the topology of the interactions within and between layers described above. The calculated value Etot for the intrachain interaction is −50.5 kJ mol−1, and for interchain interactions is down to −95.8 kJ mol−1. The interlayer interactions are represented by an energy of −19.8 kJ mol−1. The colour-coded interaction mappings within a radius of 3.8 Å of a central reference molecule together with full details of the various contributions to the total energy (Eele, Epol, Edis, Erep) are shown in the table in Fig. 5
.
| Figure 5 (a) The calculated energy frameworks, showing the total energy diagrams (Etot), (b) decomposition of the energy framework into the part corresponding to the interactions within a supramolecular layer and (c) interlayer interactions. In the table, the corresponding colour-coded energy values Etot are provided, including their Eele, Epol, Edis, and Erep components. Tube size is set at 100 scale. |
4. Database survey
A search of the Cambridge Structural Database (CSD, Version 5.42, last update August 2024; Groom et al., 2016
) reveals several similar neutral 3d MII complexes with tridentate bisazolpyridine ligands with a deprotonable azole groups, for example, of NiII: YOCFAZ (Yuan et al., 2014
), ZOCKOT (Xing et al., 2014
), and ZOTVIP (Wei et al., 2015
); of FeII: EGIDIL (Seredyuk et al., 2024b
), LUTGEO (Senthil Kumar et al., 2015
), and XODCEB (Shiga et al., 2019
). In addition, there are related complexes based on phenanthroline-benzimidazole (DOMQUT; Seredyuk et al., 2014
), dipyridylpyrrol (NIRLOT; Grunwald et al., 2023
). The values of the trigonal distortion and CShM(Oh) change in correspondence to the length of M—N distances, and for shorter distances they are systematically lower than for the longer distances. Table 2
collates some key structural parameters of the complexes and of the title compound.
|
5. Synthesis and crystallization
The synthesis of the title compound is identical to that reported for a similar complex (Seredyuk et al., 2022
). It was produced by using a layering technique in a standard test tube. The layering sequence was as follows: the bottom layer contained a solution of [Ni(L2)](ClO4)2 prepared by dissolving L = 2-[3-(benzo[d][1,3]dioxol-5-yl)-1H-1,2,4-triazol-5-yl]-6-(1H-pyrazol-1-yl)pyridine (88 mg, 0.274 mmol) and Ni(ClO4)2·6H2O (50 mg, 0.137 mmol) in boiling acetone (5 ml), to which chloroform (5 ml) was then added. The middle layer was a methanol–chloroform mixture (1:10) (10 ml), which was covered by a layer of methanol (10 ml) to which 100 µl of NEt3 were added dropwise. The tube was sealed and violet plate-like single crystals appeared after 2 weeks (yield ca. 58%). Elemental analysis calculated for C36H30N12NiO6: C, 55.05; H, 3.85; N, 21.40. Found: C, 55.66; H, 3.48; N, 21.61.
6. Refinement details
Crystal data, data collection and structure details are summarized in Table 3
. The O-bound H atom was refined with Uiso(H) = 1.5Ueq(O); the hydrogen atom H3A was refined freely. All other H atoms were refined as riding [C—H = 0.95–0.99 Å with Uiso(H) = 1.2–1.5Ueq(C)]. An attempt to model a potential disorder in the oxalan moiety was unsuccessful as it did not improve the refinement. One reflection (002), which was obscured by the beamstop, was omitted as clear outlier.
|
Supporting information
CCDC reference: 2477384
contains datablock I. DOI: https://doi.org/10.1107/S2056989025006851/yz2071sup1.cif
Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2056989025006851/yz2071Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2056989025006851/yz2071Isup3.cdx
| [Ni(C17H11N6O2)2]·2CH4O | Dx = 1.467 Mg m−3 |
| Mr = 785.42 | Mo Kα radiation, λ = 0.71073 Å |
| Orthorhombic, Pbcn | Cell parameters from 2720 reflections |
| a = 12.7636 (4) Å | θ = 2.2–25.8° |
| b = 10.4956 (4) Å | µ = 0.61 mm−1 |
| c = 26.5411 (12) Å | T = 200 K |
| V = 3555.5 (2) Å3 | Plate, clear light violet |
| Z = 4 | 0.3 × 0.25 × 0.04 mm |
| F(000) = 1624 |
| Xcalibur, Eos diffractometer | 3146 independent reflections |
| Radiation source: fine-focus sealed X-ray tube, Enhance (Mo) X-ray Source | 2236 reflections with I > 2σ(I) |
| Graphite monochromator | Rint = 0.060 |
| Detector resolution: 16.1593 pixels mm-1 | θmax = 25.0°, θmin = 2.2° |
| ω scans | h = −10→15 |
| Absorption correction: multi-scan (CrysAlisPro; Rigaku OD, 2024) | k = −12→9 |
| Tmin = 0.982, Tmax = 1.000 | l = −19→31 |
| 12665 measured reflections |
| Refinement on F2 | Primary atom site location: dual |
| Least-squares matrix: full | Hydrogen site location: mixed |
| R[F2 > 2σ(F2)] = 0.053 | H atoms treated by a mixture of independent and constrained refinement |
| wR(F2) = 0.098 | w = 1/[σ2(Fo2) + (0.0254P)2 + 2.476P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.04 | (Δ/σ)max < 0.001 |
| 3146 reflections | Δρmax = 0.31 e Å−3 |
| 254 parameters | Δρmin = −0.35 e Å−3 |
| 0 restraints |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| x | y | z | Uiso*/Ueq | ||
| Ni1 | 0.500000 | 0.69588 (5) | 0.750000 | 0.02073 (17) | |
| N3 | 0.34364 (17) | 0.7067 (2) | 0.76431 (9) | 0.0210 (6) | |
| N6 | 0.29635 (19) | 0.4568 (2) | 0.67333 (11) | 0.0294 (7) | |
| O3 | 0.6459 (2) | 0.5655 (3) | 0.61469 (11) | 0.0479 (8) | |
| N4 | 0.43894 (17) | 0.5611 (2) | 0.70073 (10) | 0.0235 (6) | |
| N2 | 0.38524 (18) | 0.8644 (2) | 0.81994 (10) | 0.0268 (7) | |
| N1 | 0.48769 (18) | 0.8386 (2) | 0.80741 (10) | 0.0246 (6) | |
| N5 | 0.47127 (18) | 0.4777 (2) | 0.66463 (10) | 0.0262 (7) | |
| C4 | 0.3065 (2) | 0.7917 (3) | 0.79625 (12) | 0.0251 (8) | |
| C10 | 0.3842 (2) | 0.4172 (3) | 0.64927 (13) | 0.0263 (8) | |
| C7 | 0.1705 (2) | 0.6386 (3) | 0.74627 (15) | 0.0388 (10) | |
| H7 | 0.123624 | 0.584348 | 0.728607 | 0.047* | |
| C9 | 0.3345 (2) | 0.5459 (3) | 0.70425 (13) | 0.0245 (8) | |
| O2 | 0.2148 (3) | 0.0879 (3) | 0.54493 (14) | 0.0921 (12) | |
| C6 | 0.1333 (2) | 0.7279 (4) | 0.77975 (15) | 0.0431 (11) | |
| H6 | 0.059945 | 0.735043 | 0.785111 | 0.052* | |
| C5 | 0.2007 (2) | 0.8075 (3) | 0.80573 (13) | 0.0363 (9) | |
| H5 | 0.175702 | 0.869689 | 0.828819 | 0.044* | |
| C12 | 0.2941 (3) | 0.2482 (3) | 0.60018 (15) | 0.0412 (10) | |
| H12 | 0.234731 | 0.254816 | 0.621630 | 0.049* | |
| C11 | 0.3833 (2) | 0.3232 (3) | 0.60829 (13) | 0.0290 (8) | |
| C8 | 0.2776 (2) | 0.6292 (3) | 0.73882 (12) | 0.0250 (8) | |
| C3 | 0.3786 (3) | 0.9550 (3) | 0.85594 (14) | 0.0380 (10) | |
| H3 | 0.316294 | 0.988162 | 0.870435 | 0.046* | |
| O1 | 0.3599 (3) | 0.0627 (3) | 0.49288 (12) | 0.0741 (10) | |
| C16 | 0.4691 (3) | 0.3094 (3) | 0.57656 (13) | 0.0363 (9) | |
| H16 | 0.529763 | 0.359884 | 0.582264 | 0.044* | |
| C14 | 0.3798 (3) | 0.1522 (4) | 0.52947 (15) | 0.0462 (10) | |
| C15 | 0.4686 (3) | 0.2229 (3) | 0.53634 (15) | 0.0452 (10) | |
| H15 | 0.527454 | 0.213721 | 0.514753 | 0.054* | |
| C2 | 0.4785 (3) | 0.9895 (3) | 0.86743 (15) | 0.0406 (10) | |
| H2 | 0.499792 | 1.051567 | 0.891392 | 0.049* | |
| C13 | 0.2950 (3) | 0.1662 (4) | 0.56088 (16) | 0.0485 (11) | |
| C1 | 0.5433 (2) | 0.9155 (3) | 0.83694 (13) | 0.0287 (8) | |
| H1 | 0.617703 | 0.919390 | 0.837224 | 0.034* | |
| C18 | 0.6032 (4) | 0.6536 (4) | 0.58103 (17) | 0.0741 (15) | |
| H18A | 0.570036 | 0.608158 | 0.552967 | 0.111* | |
| H18B | 0.658810 | 0.708858 | 0.568045 | 0.111* | |
| H18C | 0.550579 | 0.705408 | 0.598456 | 0.111* | |
| C17 | 0.2564 (4) | 0.0181 (5) | 0.5035 (2) | 0.0920 (18) | |
| H17A | 0.211247 | 0.029769 | 0.473482 | 0.110* | |
| H17B | 0.258379 | −0.073876 | 0.511717 | 0.110* | |
| H3A | 0.597 (3) | 0.534 (4) | 0.6305 (15) | 0.048 (13)* |
| U11 | U22 | U33 | U12 | U13 | U23 | |
| Ni1 | 0.0147 (3) | 0.0252 (3) | 0.0223 (3) | 0.000 | 0.0005 (3) | 0.000 |
| N3 | 0.0162 (13) | 0.0235 (14) | 0.0234 (17) | 0.0020 (11) | 0.0026 (11) | −0.0039 (14) |
| N6 | 0.0246 (15) | 0.0327 (17) | 0.0310 (18) | −0.0006 (12) | −0.0024 (13) | −0.0107 (15) |
| O3 | 0.0357 (16) | 0.058 (2) | 0.050 (2) | 0.0056 (13) | 0.0075 (14) | 0.0173 (17) |
| N4 | 0.0220 (15) | 0.0247 (15) | 0.0237 (17) | 0.0005 (11) | 0.0009 (12) | −0.0042 (14) |
| N2 | 0.0208 (15) | 0.0291 (16) | 0.0305 (18) | 0.0003 (11) | 0.0014 (12) | −0.0093 (15) |
| N1 | 0.0169 (14) | 0.0303 (15) | 0.0265 (16) | −0.0007 (11) | 0.0048 (12) | 0.0012 (13) |
| N5 | 0.0231 (15) | 0.0283 (15) | 0.0271 (18) | 0.0007 (11) | −0.0004 (12) | −0.0063 (15) |
| C4 | 0.0186 (17) | 0.0298 (19) | 0.027 (2) | 0.0004 (14) | −0.0004 (14) | −0.0028 (18) |
| C10 | 0.0264 (18) | 0.0256 (19) | 0.027 (2) | 0.0039 (14) | −0.0006 (15) | 0.0003 (18) |
| C7 | 0.0173 (18) | 0.049 (2) | 0.051 (3) | −0.0011 (14) | 0.0014 (17) | −0.020 (2) |
| C9 | 0.0190 (18) | 0.0267 (19) | 0.028 (2) | −0.0011 (13) | 0.0006 (14) | −0.0016 (18) |
| O2 | 0.104 (3) | 0.091 (3) | 0.082 (3) | −0.043 (2) | −0.005 (2) | −0.047 (2) |
| C6 | 0.0161 (18) | 0.058 (3) | 0.056 (3) | 0.0009 (16) | 0.0055 (17) | −0.019 (2) |
| C5 | 0.0253 (19) | 0.046 (2) | 0.038 (2) | 0.0009 (16) | 0.0043 (16) | −0.019 (2) |
| C12 | 0.044 (2) | 0.041 (2) | 0.039 (3) | −0.0047 (17) | −0.0009 (18) | −0.013 (2) |
| C11 | 0.0362 (19) | 0.0242 (19) | 0.027 (2) | 0.0044 (14) | −0.0051 (16) | −0.0002 (18) |
| C8 | 0.0214 (17) | 0.0274 (18) | 0.026 (2) | −0.0009 (13) | −0.0020 (14) | −0.0039 (17) |
| C3 | 0.030 (2) | 0.039 (2) | 0.045 (3) | 0.0021 (16) | 0.0047 (17) | −0.018 (2) |
| O1 | 0.122 (3) | 0.054 (2) | 0.047 (2) | −0.0098 (19) | −0.0071 (19) | −0.0288 (19) |
| C16 | 0.045 (2) | 0.032 (2) | 0.031 (2) | 0.0050 (16) | −0.0009 (17) | −0.003 (2) |
| C14 | 0.079 (3) | 0.032 (2) | 0.027 (2) | 0.005 (2) | −0.008 (2) | −0.003 (2) |
| C15 | 0.064 (3) | 0.040 (2) | 0.032 (2) | 0.0120 (19) | 0.0068 (19) | 0.000 (2) |
| C2 | 0.041 (2) | 0.039 (2) | 0.042 (3) | −0.0059 (17) | −0.0033 (18) | −0.017 (2) |
| C13 | 0.066 (3) | 0.036 (2) | 0.044 (3) | −0.0125 (19) | −0.013 (2) | −0.011 (2) |
| C1 | 0.0235 (17) | 0.0300 (19) | 0.033 (2) | −0.0098 (14) | −0.0064 (16) | −0.0005 (19) |
| C18 | 0.113 (4) | 0.058 (3) | 0.051 (3) | 0.032 (3) | 0.026 (3) | 0.011 (3) |
| C17 | 0.143 (5) | 0.065 (4) | 0.069 (4) | −0.031 (4) | −0.016 (4) | −0.026 (3) |
| Ni1—N3i | 2.035 (2) | O2—C17 | 1.425 (5) |
| Ni1—N3 | 2.035 (2) | C6—H6 | 0.9500 |
| Ni1—N4i | 2.078 (3) | C6—C5 | 1.383 (4) |
| Ni1—N4 | 2.078 (3) | C5—H5 | 0.9500 |
| Ni1—N1 | 2.143 (3) | C12—H12 | 0.9500 |
| Ni1—N1i | 2.143 (3) | C12—C11 | 1.401 (4) |
| N3—C4 | 1.319 (4) | C12—C13 | 1.353 (5) |
| N3—C8 | 1.353 (4) | C11—C16 | 1.389 (4) |
| N6—C10 | 1.356 (4) | C3—H3 | 0.9500 |
| N6—C9 | 1.336 (4) | C3—C2 | 1.360 (4) |
| O3—C18 | 1.396 (5) | O1—C14 | 1.375 (4) |
| O3—H3A | 0.82 (3) | O1—C17 | 1.430 (5) |
| N4—N5 | 1.362 (3) | C16—H16 | 0.9500 |
| N4—C9 | 1.345 (3) | C16—C15 | 1.401 (5) |
| N2—N1 | 1.376 (3) | C14—C15 | 1.366 (5) |
| N2—C4 | 1.410 (4) | C14—C13 | 1.374 (5) |
| N2—C3 | 1.350 (4) | C15—H15 | 0.9500 |
| N1—C1 | 1.330 (4) | C2—H2 | 0.9500 |
| N5—C10 | 1.343 (4) | C2—C1 | 1.394 (5) |
| C4—C5 | 1.383 (4) | C1—H1 | 0.9500 |
| C10—C11 | 1.468 (4) | C18—H18A | 0.9800 |
| C7—H7 | 0.9500 | C18—H18B | 0.9800 |
| C7—C6 | 1.376 (5) | C18—H18C | 0.9800 |
| C7—C8 | 1.385 (4) | C17—H17A | 0.9900 |
| C9—C8 | 1.461 (4) | C17—H17B | 0.9900 |
| O2—C13 | 1.379 (4) | ||
| N3i—Ni1—N3 | 173.57 (14) | C4—C5—H5 | 121.8 |
| N3—Ni1—N4 | 77.75 (10) | C6—C5—C4 | 116.3 (3) |
| N3—Ni1—N4i | 106.77 (10) | C6—C5—H5 | 121.8 |
| N3i—Ni1—N4 | 106.77 (9) | C11—C12—H12 | 121.0 |
| N3i—Ni1—N4i | 77.75 (9) | C13—C12—H12 | 121.0 |
| N3—Ni1—N1 | 75.88 (9) | C13—C12—C11 | 118.0 (4) |
| N3—Ni1—N1i | 99.53 (9) | C12—C11—C10 | 119.8 (3) |
| N3i—Ni1—N1i | 75.88 (9) | C16—C11—C10 | 120.9 (3) |
| N3i—Ni1—N1 | 99.53 (9) | C16—C11—C12 | 119.3 (3) |
| N4—Ni1—N4i | 94.21 (14) | N3—C8—C7 | 120.0 (3) |
| N4—Ni1—N1 | 153.63 (9) | N3—C8—C9 | 111.4 (3) |
| N4i—Ni1—N1i | 153.63 (9) | C7—C8—C9 | 128.6 (3) |
| N4—Ni1—N1i | 93.21 (10) | N2—C3—H3 | 126.6 |
| N4i—Ni1—N1 | 93.21 (10) | N2—C3—C2 | 106.7 (3) |
| N1—Ni1—N1i | 91.26 (14) | C2—C3—H3 | 126.6 |
| C4—N3—Ni1 | 120.7 (2) | C14—O1—C17 | 104.8 (3) |
| C4—N3—C8 | 120.3 (3) | C11—C16—H16 | 119.2 |
| C8—N3—Ni1 | 118.9 (2) | C11—C16—C15 | 121.7 (3) |
| C9—N6—C10 | 101.7 (2) | C15—C16—H16 | 119.2 |
| C18—O3—H3A | 107 (3) | C15—C14—O1 | 128.2 (4) |
| N5—N4—Ni1 | 140.06 (18) | C15—C14—C13 | 121.0 (4) |
| C9—N4—Ni1 | 114.1 (2) | C13—C14—O1 | 110.9 (4) |
| C9—N4—N5 | 105.8 (2) | C16—C15—H15 | 121.4 |
| N1—N2—C4 | 117.6 (2) | C14—C15—C16 | 117.2 (4) |
| C3—N2—N1 | 111.6 (2) | C14—C15—H15 | 121.4 |
| C3—N2—C4 | 130.7 (3) | C3—C2—H2 | 126.9 |
| N2—N1—Ni1 | 112.28 (18) | C3—C2—C1 | 106.1 (3) |
| C1—N1—Ni1 | 143.5 (2) | C1—C2—H2 | 126.9 |
| C1—N1—N2 | 104.2 (3) | C12—C13—O2 | 127.6 (4) |
| C10—N5—N4 | 105.5 (2) | C12—C13—C14 | 122.8 (4) |
| N3—C4—N2 | 113.3 (2) | C14—C13—O2 | 109.6 (4) |
| N3—C4—C5 | 123.3 (3) | N1—C1—C2 | 111.3 (3) |
| C5—C4—N2 | 123.3 (3) | N1—C1—H1 | 124.4 |
| N6—C10—C11 | 123.3 (3) | C2—C1—H1 | 124.4 |
| N5—C10—N6 | 113.3 (3) | O3—C18—H18A | 109.5 |
| N5—C10—C11 | 123.3 (3) | O3—C18—H18B | 109.5 |
| C6—C7—H7 | 120.6 | O3—C18—H18C | 109.5 |
| C6—C7—C8 | 118.8 (3) | H18A—C18—H18B | 109.5 |
| C8—C7—H7 | 120.6 | H18A—C18—H18C | 109.5 |
| N6—C9—N4 | 113.7 (3) | H18B—C18—H18C | 109.5 |
| N6—C9—C8 | 128.6 (3) | O2—C17—O1 | 109.1 (4) |
| N4—C9—C8 | 117.7 (3) | O2—C17—H17A | 109.9 |
| C13—O2—C17 | 105.5 (4) | O2—C17—H17B | 109.9 |
| C7—C6—H6 | 119.4 | O1—C17—H17A | 109.9 |
| C7—C6—C5 | 121.2 (3) | O1—C17—H17B | 109.9 |
| C5—C6—H6 | 119.4 | H17A—C17—H17B | 108.3 |
| Ni1—N3—C4—N2 | −3.3 (4) | C10—C11—C16—C15 | −178.1 (3) |
| Ni1—N3—C4—C5 | 176.9 (3) | C7—C6—C5—C4 | −0.2 (6) |
| Ni1—N3—C8—C7 | −177.2 (3) | C9—N6—C10—N5 | 0.3 (4) |
| Ni1—N3—C8—C9 | 0.9 (3) | C9—N6—C10—C11 | −176.1 (3) |
| Ni1—N4—N5—C10 | 178.3 (3) | C9—N4—N5—C10 | −0.6 (3) |
| Ni1—N4—C9—N6 | −178.4 (2) | C6—C7—C8—N3 | 0.2 (5) |
| Ni1—N4—C9—C8 | 3.8 (4) | C6—C7—C8—C9 | −177.5 (3) |
| Ni1—N1—C1—C2 | 179.5 (3) | C12—C11—C16—C15 | 0.4 (5) |
| N3—C4—C5—C6 | 0.3 (5) | C11—C12—C13—O2 | −177.2 (4) |
| N6—C10—C11—C12 | −15.0 (5) | C11—C12—C13—C14 | 1.1 (6) |
| N6—C10—C11—C16 | 163.5 (3) | C11—C16—C15—C14 | 0.0 (5) |
| N6—C9—C8—N3 | 179.5 (3) | C8—N3—C4—N2 | 179.7 (3) |
| N6—C9—C8—C7 | −2.6 (6) | C8—N3—C4—C5 | −0.1 (5) |
| N4—N5—C10—N6 | 0.2 (4) | C8—C7—C6—C5 | 0.0 (6) |
| N4—N5—C10—C11 | 176.5 (3) | C3—N2—N1—Ni1 | −179.7 (2) |
| N4—C9—C8—N3 | −3.1 (4) | C3—N2—N1—C1 | 0.3 (3) |
| N4—C9—C8—C7 | 174.8 (3) | C3—N2—C4—N3 | −176.7 (3) |
| N2—N1—C1—C2 | −0.4 (4) | C3—N2—C4—C5 | 3.1 (6) |
| N2—C4—C5—C6 | −179.5 (3) | C3—C2—C1—N1 | 0.4 (4) |
| N2—C3—C2—C1 | −0.2 (4) | O1—C14—C15—C16 | 179.4 (3) |
| N1—N2—C4—N3 | −0.2 (4) | O1—C14—C13—O2 | −1.6 (5) |
| N1—N2—C4—C5 | 179.6 (3) | O1—C14—C13—C12 | 179.9 (4) |
| N1—N2—C3—C2 | −0.1 (4) | C14—O1—C17—O2 | 3.1 (5) |
| N5—N4—C9—N6 | 0.8 (4) | C15—C14—C13—O2 | 177.9 (4) |
| N5—N4—C9—C8 | −176.9 (3) | C15—C14—C13—C12 | −0.7 (6) |
| N5—C10—C11—C12 | 169.0 (3) | C13—O2—C17—O1 | −4.1 (5) |
| N5—C10—C11—C16 | −12.5 (5) | C13—C12—C11—C10 | 177.6 (3) |
| C4—N3—C8—C7 | −0.1 (5) | C13—C12—C11—C16 | −1.0 (5) |
| C4—N3—C8—C9 | 177.9 (3) | C13—C14—C15—C16 | 0.1 (6) |
| C4—N2—N1—Ni1 | 3.2 (3) | C17—O2—C13—C12 | −178.1 (4) |
| C4—N2—N1—C1 | −176.8 (3) | C17—O2—C13—C14 | 3.4 (5) |
| C4—N2—C3—C2 | 176.6 (3) | C17—O1—C14—C15 | 179.6 (4) |
| C10—N6—C9—N4 | −0.7 (4) | C17—O1—C14—C13 | −1.0 (5) |
| C10—N6—C9—C8 | 176.8 (3) |
| Symmetry code: (i) −x+1, y, −z+3/2. |
| D—H···A | D—H | H···A | D···A | D—H···A |
| C3—H3···O3ii | 0.95 | 2.35 | 3.282 (5) | 165 |
| C5—H5···O3ii | 0.95 | 2.57 | 3.505 (4) | 167 |
| C7—H7···C1iii | 0.95 | 2.68 | 3.605 (5) | 163 |
| C1—H1···N6iv | 0.95 | 2.33 | 3.270 (4) | 170 |
| C17—H17A···C18v | 0.99 | 2.78 | 3.479 (7) | 129 |
| C17—H17A···O3v | 0.99 | 2.68 | 3.550 (6) | 147 |
| O3—H3A···N5 | 0.82 (4) | 1.94 (4) | 2.752 (4) | 173 (4) |
| Symmetry codes: (ii) x−1/2, y+1/2, −z+3/2; (iii) x−1/2, y−1/2, −z+3/2; (iv) x+1/2, y+1/2, −z+3/2; (v) x−1/2, −y+1/2, −z+1. |
| CSD Refcode | Metal ion< | <M—N> (Å) | Σ (°) | Θ (°) | CShM(Oh) |
| Title compound | Ni | 2.085 | 117.2 | 391.6 | 3.60 |
| YOCFAZ | Ni | 2.088a | 120.8a | 397.6a | 3.65a |
| ZOCKOT | Ni | 2.086 | 121.0 | 375.9 | 3.78 |
| ZOTVIP | Ni | 2.110 | 124.9 | 382.4 | 3.55 |
| EGIDIL | Fe | 1.955 | 89.8 | 314.6 | 2.25 |
| EGIDIL02 | Fe | 2.167 | 146.8 | 492.8 | 5.28 |
| LUTGEO | Fe | 1.933 | 85.0 | 309.6 | 2.10 |
| XODCEB | Fe | 1.950 | 87.4 | 276.6 | 1.93 |
| DOMQUT | Fe | 1.991 | 88.5 | 320.0 | 2.48 |
| DOMQUT02 | Fe | 2.183 | 139.6 | 486.9 | 5.31 |
| NIRLOT | Fe | 1.939 | 77.3 | 255.6 | 1.68 |
| Note: (a) averaged value. |
| D–H···A | D–H | H···A | D···A | D–H···A |
| C3–H···O3ii | 0.95 | 2.36 | 3.282 (5) | 165 |
| C5–H···O3ii | 0.95 | 2.57 | 3.505 (4) | 167 |
| C7–H···C1iii | 0.95 | 2.68 | 3.605 (5) | 163 |
| N6···H–C1iii | 0.95 | 2.33 | 3.270 (4) | 170 |
| C17–H···C18iv | 0.99 | 2.78 | 3.479 (7) | 129 |
| C17–H···O3iv | 0.99 | 2.68 | 3.550 (6) | 147 |
| O3–H···N6 | 0.82 | 1.94 | 2.753 (4) | 172 |
| Symmetry codes: (i) 1-x,1+y,1.5-z; (ii) -1/2+x,1/2+y,1.5-z; (iii) -1/2+x,-1/2+y,1.5-z; (iv) -1/2+x,1/2-y,1-z |
Acknowledgements
The authors are grateful to the FAIRE programme provided by the Cambridge Crystallographic Data Centre (CCDC) for the opportunity to use the Cambridge Structural Database (CSD) and associated software. Author contributions are as follows: Conceptualization, KZ and MS; methodology, KZ; formal analysis, AK; synthesis, SOM; single-crystal measurements, SS; writing (original draft), KZ; writing (review and editing of the manuscript), VN, MS; visualization and calculations, KZ, IOF; funding acquisition, MS and KZ.
Funding information
Funding for this research was provided by grant No. 24BF037-03 from the Ministry of Education and Science of Ukraine. This work was supported by the European Union's HORIZON-MSCA-2023-SE-01 programme under grant agreement No. 101183082 – PacemCAT.
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