research communications
An analogue of indapamide: and Hirshfeld surface analysis of 3-chloro-4-(N,N-diethynylsulfamoyl)-N-(2-methylindolin-1-yl)benzamide
aLaboratory of Medicinal Chemistry, Drug Sciences Research Center, Faculty of Medicine and Pharmacy Mohammed V University in Rabat, Morocco, bLaboratoire de Chimie Organique Heterocyclique Faculté des Sciences, Université Mohammed V, Rabat, Morocco, cLaboratoire de Chimie et Biochimie, Institut Superieur des Techniques Medicales, Kinshasa, Republique Democratique, Congo, dLaboratory of Medicinal Chemistry, Faculty of Clinical Pharmacy, 21 September University, Yemen, and eDepartment of Chemistry, Tulane University New Orleans, LA, 70118, USA
*Correspondence e-mail: [email protected], [email protected]
The title molecule, C22H20ClN3O3S, adopts a shallow cup-shaped conformation with the chlorobenzamide portion as the bottom. A puckering analysis of the five-membered ring indicates an envelope conformation. In the crystal, helical chains along the a-axis direction are formed by N—H⋯O hydrogen bonds reinforced by C—H⋯π(ring) and weak π-stacking interactions. No directed interactions between chains appear to exist. A Hirshfeld surface analysis was performed.
Keywords: crystal structure; indole; benzamide; alkyne; sulfamoyl; hydrogen bond; Hirshfeld surface.
CCDC reference: 2544250
1. Chemical context
Indapamide, C16H16ClN3O3S, an indoline derivative, is a dihydroindole-based thiazide-like diuretic used to treat hypertension and to manage heart failure. It is on the World Health Organization Model List of Essential Medicines. The molecule contains a polar sulfamoyl chlorobenzamide moiety and a lipid-soluble methylindoline moiety. Chemically, indole derivatives demonstrating antiviral activity are substituted at the 2-, 3-, 5-, and 6-positions of the nucleus. Moreover, various activities are associated with indole derivatives, including antiviral (Kadam & Wilson, 2016
). Some analogs have also been synthesized and evaluated for their industrial properties (e.g. Ettahiri et al., 2024
).
Drug discovery is a long and complicated process. The average cost of discovering a new medicine by traditional methods is $2.6 billion, and the complete workflow may take more than 12 years (Mohs & Greig, 2017
). An alternative to new drug development is drug repositioning, using an existing drug for a new treatment that was not indicated before. It is of essential importance today to accelerate the drug discovery process and find solutions more quickly for the overburdened healthcare system and the increasing need for medicines. This practice has received immense attention during the COVID-19 pandemic.
As part of our work in this area including the use of indapamide analogues in a repositioning process (Ramli et al., 2023
; Al Garadi et al., 2024
), the title compound, C22H20ClN3O3S, was synthesized via an alkylation reaction with propargyl bromide under phase-transfer catalysis conditions and its crystal structure is reported here (Fig. 1
). A Hirshfeld surface analysis was performed to analyze the intermolecular interactions.
| Figure 1 The title molecule with labeling scheme and 30% probability ellipsoids. |
2. Structural commentary
The title molecule adopts a shallow cup-shaped conformation with the 3-chlorobenzamide portion forming the bottom of the cup. A puckering analysis of the C1/C6/C7/C8/N1 ring (Cremer & Pople, 1975
) yielded the parameters Q(2) = 0.317 (4) Å and φ(2) = 329.1 (8)° with the conformation characterized as an envelope on C8. The dihedral angle between the C1–C6 and C11–C16 rings is 63.2 (2)°. The propynyl groups point in opposite directions from the extension of the S1⋯N3 vector giving the N(CH2C≡CH)2 moiety a V-shape when viewed along the normal to the C15/S1/N3 plane (Fig. 1
). All bond lengths and interbond angles appear as expected for the given formulation.
3. Supramolecular features
In the crystal, helical chains extending along the a-axis direction are formed by N2—H2A⋯O1 hydrogen bonds (Table 1
and Fig. 2
). These are strengthened by C7—H7A⋯Cg3 interactions (Cg3 is the centroid of the C11–C16 ring) and weak π-stacking interactions between the C1–C6 and C11–C16 rings [centroid⋯centroid = 3.859 (3) Å, dihedral angle = 7.2 (2)°, slippage = 0.959 Å] (Table 2
and Fig. 1
). There appear to be no directed interactions between the chains (Fig. 3
).
| ||||||||||||||||||||||
|
| Figure 2 Detail of one chain viewed along the b-axis direction. N—H⋯O hydrogen bonds are depicted by blue dashed lines while π-stacking and C—H⋯π(ring) interactions are depicted, respectively, by orange and green dashed lines. |
| Figure 3 Packing viewed along the a-axis direction. Only the N—H⋯O hydrogen bonds (gray dashed lines) are shown for clarity. |
4. Database survey
A search of the Cambridge Structural Database (CSD, updated to Feb. 2026; Groom et al., 2016
) with the fragment shown in Fig. 4
a yielded the three hits shown in Fig. 4
. The cores of all three are essentially the same as that of the title molecule, but the conformations of the full molecule are different because of the different peripheral substituents and this leads to significantly different packings. Both KOTVOG (Poulsen & Healy, 2014
) and MUFSUE (Gupta et al., 2020
) are considerably smaller than the title compound and are expected to display a more compact crystal packing. Furthermore, both have a terminal –NH2 group instead of the indolinyl moiety, and the former also has one on the sulfur atom, leading to greater opportunities for intermolecular hydrogen bonding. In KOTVOG, therefore, inversion dimers are formed by N—H⋯O hydrogen bonds between the S—NH2 group of one molecule and the carbonyl oxygen atom of the second. These units are connected by pairwise N—H⋯O hydrogen bonds between the same groups, forming chains of dimers that extend along the c-axis direction. The chains are connected by pairwise N—H⋯N hydrogen bonds between the hydrazinyl moieties in layers parallel to (10), which contrasts with the packing in the title molecule. There are also no π-stacking or C—H⋯π(ring) interactions. With only the hydrazinyl group present in MUFSUE, fewer hydrogen bonds can be formed. Pairwise N—H⋯O hydrogen bonds between the terminal NH2 and carbonyl groups form inversion dimers, which are connected by inversion-related N—H⋯N hydrogen bonds between the hydrazinyl moieties into ribbons extending along the b-axis direction. The ribbons are connected via weak C—H⋯O hydrogen bonds between one ethyl group and a sulfonyl oxygen atom. In YICTAJ (Liu et al., 2023
), the hydroxyl group makes an intramolecular O—H⋯N hydrogen bond and is therefore not available for intermolecular interactions, leaving only the two secondary amino groups for this latter purpose. One forms an N—H⋯O hydrogen bond with a dimethylformamide solvent molecule, the other does not. The only intermolecular interaction appears to be a weak C—H⋯O hydrogen bond generating chains extending along the b-axis direction.
| Figure 4 Search fragment (a) and structures of hits in the Database Survey. |
5. Hirshfeld surface analysis
To quantify the several intermolecular interactions in the title compound, a Hirshfeld surface (HS) analysis was performed with CrystalExplorer (Spackman et al., 2021
). Descriptions of the plots obtained and their interpretations have been published (Tan et al., 2019
). Fig. 5
shows a portion of one helical chain with the HS for the central molecule plotted over dnorm and over the shape function. The dark red spot in the former clearly indicates the N—H⋯O hydrogen bonds while the π-stacking interaction shown in Fig. 2
can be seen near the top left of the latter. The C—H⋯π(ring) interaction shown in Fig. 2
can be seen just below the dark orange spot at the right center of Fig. 5
b. The two-dimensional fingerprint plots are presented in Fig. 6
where Fig. 6
a shows all interactions and Fig. 6
b the H⋯H contacts, which comprise 39.9% of the total. This is as expected since the periphery of the molecule consists mainly of hydrogen atoms. At 24.9% of the total are the C⋯H/H⋯C interactions (Fig. 6
c), which appear as a pair of rounded peaks at de + di ≃ 2.7 Å superimposed on more diffuse peaks. The former can be associated with the C—H⋯π(ring) interactions, since the H⋯C distances in these contacts cover a relatively narrow range, while the latter represent various van der Waals H⋯C contacts. The pair of sharp spikes at de + di ≃ 2.2 Å (6d) are assigned to O⋯H/H⋯O contacts (19.1%) which are mainly the N—H⋯O hydrogen bonds. Since no N—H⋯Cl or C—H⋯Cl hydrogen bonds are reported, it may seem surprising that H⋯Cl contacts (Fig. 6
e) amount to 7.3% of the total. However, the sum of the van der Waals radii for these two atoms is 2.95 Å and de + di ≃ 3.2 Å for the H⋯Cl contacts, so this represents no significant attractive interactions. Finally, the C⋯C contacts (Fig. 6
f) contribute 6.1% and can be attributed largely to the π-stacking interactions noted in Section 3. All other atom⋯atom contacts make significantly smaller contributions.
| Figure 5 The dnorm (a) and shape surfaces (b) with neighboring molecules. The N—H⋯O hydrogen bonds are depicted by red dashed lines. |
| Figure 6 Two-dimensional fingerprint plots showing all intermolecular interactions (a) and those resolved into H⋯H (b), C⋯H/H⋯C (c), O⋯H/H⋯O (d), Cl⋯H/H⋯Cl (e) and C⋯C (f) interactions. |
6. Synthesis and crystallization
Indapamide (0.5 g, 1.36 mmol) and potassium bicarbonate (0.37 g, 2.70 mmol) were dissolved in dimethylformamide (10 mL), to which was added dropwise propargyl bromide (2.90 mmol) along with a catalytic amount of BTBA (benzyl tributyl ammonium bromide). Under reflux, the reaction was stirred for 2 h at 355 K. When the starting reagents had reacted completely, distilled water (100 ml) was added. The product precipitated in solid form, was filtered, dried and recrystallized from ethanol solution to afford colorless blocks.
Yield = 67%, m.p. = 440–442 K. FT-IR (ATR, cm−1): 3375 (CH propargyl), 3060–3080, (CH aromatic), 1765 (C=O); 1H NMR (500MHz, DMSO-d6): ppm 0.917–0.929 (d, 3H, CH3, indo), 3.22 (t, 2H, CH propargyl), 4,22 (s, 4H, N—CH2), 7.03–7.42 (m, 10H, Ar—H), 9.78 (s, 1H, NH); 13C NMR: 28.01 (N—CH2); 74.40 (CH propargyl); 69.71 (C—2Ph); 74.40 (Cq propargyl); 127.25, 128.00, 128.58, 140.15 (C—Ar), 172.73 (C=O).
7. Refinement
Crystal data, data collection and structure details are summarized in Table 2
. H-atoms attached to carbon were placed in calculated positions (C—H = 0.95–1.00 Å) while that attached to nitrogen was placed in a location derived from a difference map and its coordinates adjusted to give N—H = 0.91 Å. All were included as riding contributions with isotropic displacement parameters 1.2–1.5 times those of the attached atoms. The crystal studied was refined as a two-component inversion twin (domain ratio = 94:6)..
Supporting information
CCDC reference: 2544250
contains datablocks global, I. DOI: https://doi.org/10.1107/S2056989026003580/vm2328sup1.cif
Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2056989026003580/vm2328Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2056989026003580/vm2328Isup3.cml
| C22H20ClN3O3S | Dx = 1.358 Mg m−3 |
| Mr = 441.92 | Cu Kα radiation, λ = 1.54178 Å |
| Orthorhombic, P212121 | Cell parameters from 9996 reflections |
| a = 8.4412 (2) Å | θ = 4.0–66.6° |
| b = 14.5051 (3) Å | µ = 2.71 mm−1 |
| c = 17.6477 (4) Å | T = 296 K |
| V = 2160.79 (8) Å3 | Plate, colourless |
| Z = 4 | 0.27 × 0.12 × 0.07 mm |
| F(000) = 920 |
| Bruker D8 VENTURE PHOTON 100 CMOS diffractometer | 3788 independent reflections |
| Radiation source: INCOATEC IµS micro–focus source | 3223 reflections with I > 2σ(I) |
| Mirror monochromator | Rint = 0.051 |
| Detector resolution: 10.4167 pixels mm-1 | θmax = 66.7°, θmin = 4.0° |
| ω scans | h = −10→10 |
| Absorption correction: multi-scan SADABS (Krause et al., 2015) | k = −17→17 |
| Tmin = 0.75, Tmax = 0.84 | l = −21→20 |
| 15363 measured reflections |
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: mixed |
| R[F2 > 2σ(F2)] = 0.041 | H-atom parameters constrained |
| wR(F2) = 0.095 | w = 1/[σ2(Fo2) + (0.0338P)2 + 0.5813P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.07 | (Δ/σ)max < 0.001 |
| 3788 reflections | Δρmax = 0.21 e Å−3 |
| 273 parameters | Δρmin = −0.23 e Å−3 |
| 0 restraints | Absolute structure: Refined as an inversion twin |
| Primary atom site location: dual | Absolute structure parameter: 0.06 (3) |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. H-atoms attached to carbon were placed in calculated positions (C—H = 0.95 - 1.00 Å) while that attached to nitrogen was placed in a location derived from a difference map and its coordinates adjusted to give N—H = 0.91 Å. All were included as riding contributions with isotropic displacement parameters 1.2 - 1.5 times those of the attached atoms. Refined as a 2-component inversion twin. |
| x | y | z | Uiso*/Ueq | ||
| Cl1 | 0.6475 (2) | 0.40841 (8) | 0.25598 (7) | 0.0937 (5) | |
| S1 | 0.42430 (12) | 0.57786 (8) | 0.18596 (5) | 0.0551 (3) | |
| O1 | 0.3490 (3) | 0.77986 (19) | 0.43008 (14) | 0.0479 (6) | |
| O2 | 0.3177 (4) | 0.6547 (2) | 0.18362 (17) | 0.0717 (9) | |
| O3 | 0.3681 (4) | 0.4885 (2) | 0.16709 (17) | 0.0746 (10) | |
| N1 | 0.4803 (4) | 0.8015 (2) | 0.57124 (16) | 0.0456 (7) | |
| N2 | 0.5376 (4) | 0.7404 (2) | 0.51591 (16) | 0.0490 (8) | |
| H2A | 0.637517 | 0.717908 | 0.521840 | 0.059* | |
| N3 | 0.5683 (5) | 0.6011 (2) | 0.1296 (2) | 0.0639 (10) | |
| C1 | 0.5577 (5) | 0.8871 (3) | 0.57830 (19) | 0.0431 (8) | |
| C2 | 0.6292 (5) | 0.9380 (3) | 0.5230 (2) | 0.0568 (11) | |
| H2 | 0.637507 | 0.916316 | 0.473555 | 0.068* | |
| C3 | 0.6892 (6) | 1.0237 (4) | 0.5436 (3) | 0.0758 (15) | |
| H3 | 0.738360 | 1.060132 | 0.507165 | 0.091* | |
| C4 | 0.6776 (7) | 1.0558 (3) | 0.6168 (3) | 0.0825 (16) | |
| H4 | 0.718053 | 1.113514 | 0.629203 | 0.099* | |
| C5 | 0.6061 (6) | 1.0027 (3) | 0.6716 (3) | 0.0702 (13) | |
| H5 | 0.598392 | 1.024133 | 0.721099 | 0.084* | |
| C6 | 0.5462 (5) | 0.9178 (3) | 0.65258 (19) | 0.0508 (9) | |
| C7 | 0.4650 (6) | 0.8443 (3) | 0.6988 (2) | 0.0600 (11) | |
| H7A | 0.355168 | 0.860240 | 0.708395 | 0.072* | |
| H7B | 0.518555 | 0.834821 | 0.746806 | 0.072* | |
| C8 | 0.4776 (5) | 0.7588 (3) | 0.6483 (2) | 0.0507 (9) | |
| H8 | 0.579410 | 0.728395 | 0.657652 | 0.061* | |
| C9 | 0.3472 (6) | 0.6902 (3) | 0.6575 (3) | 0.0700 (13) | |
| H9A | 0.247022 | 0.719966 | 0.649403 | 0.105* | |
| H9B | 0.350362 | 0.665124 | 0.707849 | 0.105* | |
| H9C | 0.360279 | 0.641427 | 0.621309 | 0.105* | |
| C10 | 0.4604 (4) | 0.7306 (3) | 0.44967 (18) | 0.0397 (8) | |
| C11 | 0.5168 (4) | 0.6523 (3) | 0.40122 (19) | 0.0414 (8) | |
| C12 | 0.6103 (5) | 0.5817 (3) | 0.4283 (2) | 0.0569 (10) | |
| H12 | 0.647610 | 0.583840 | 0.477844 | 0.068* | |
| C13 | 0.6493 (6) | 0.5077 (3) | 0.3826 (3) | 0.0679 (13) | |
| H13 | 0.712371 | 0.460407 | 0.401498 | 0.082* | |
| C14 | 0.5944 (6) | 0.5042 (3) | 0.3088 (2) | 0.0578 (10) | |
| C15 | 0.5012 (4) | 0.5754 (3) | 0.2801 (2) | 0.0469 (9) | |
| C16 | 0.4624 (4) | 0.6486 (3) | 0.32689 (19) | 0.0419 (8) | |
| H16 | 0.399143 | 0.696003 | 0.308369 | 0.050* | |
| C17 | 0.6593 (5) | 0.5297 (3) | 0.0899 (2) | 0.0589 (11) | |
| H17A | 0.644749 | 0.537089 | 0.035748 | 0.071* | |
| H17B | 0.618394 | 0.469623 | 0.103986 | 0.071* | |
| C18 | 0.8292 (6) | 0.5333 (4) | 0.1074 (2) | 0.0639 (12) | |
| C19 | 0.9632 (7) | 0.5378 (4) | 0.1199 (3) | 0.0846 (16) | |
| H19 | 1.071132 | 0.541463 | 0.130035 | 0.101* | |
| C20 | 0.6230 (7) | 0.6965 (3) | 0.1216 (3) | 0.0764 (14) | |
| H20A | 0.728463 | 0.702277 | 0.142864 | 0.092* | |
| H20B | 0.552950 | 0.737214 | 0.149446 | 0.092* | |
| C21 | 0.6260 (9) | 0.7239 (4) | 0.0417 (4) | 0.0961 (19) | |
| C22 | 0.6390 (13) | 0.7438 (6) | −0.0220 (5) | 0.151 (4) | |
| H22 | 0.649338 | 0.759671 | −0.072812 | 0.181* |
| U11 | U22 | U33 | U12 | U13 | U23 | |
| Cl1 | 0.1511 (14) | 0.0585 (7) | 0.0715 (7) | 0.0233 (8) | 0.0086 (8) | −0.0165 (6) |
| S1 | 0.0507 (5) | 0.0763 (7) | 0.0383 (4) | −0.0105 (6) | 0.0011 (4) | −0.0140 (5) |
| O1 | 0.0415 (14) | 0.0608 (16) | 0.0416 (13) | 0.0051 (13) | −0.0027 (12) | −0.0029 (12) |
| O2 | 0.0584 (18) | 0.110 (2) | 0.0466 (15) | 0.0233 (18) | −0.0116 (15) | −0.0128 (18) |
| O3 | 0.078 (2) | 0.090 (2) | 0.0564 (18) | −0.0401 (19) | 0.0098 (15) | −0.0251 (16) |
| N1 | 0.0547 (19) | 0.0486 (17) | 0.0336 (13) | −0.0008 (15) | −0.0017 (13) | −0.0081 (13) |
| N2 | 0.0456 (18) | 0.0597 (19) | 0.0417 (15) | 0.0078 (16) | −0.0079 (14) | −0.0137 (14) |
| N3 | 0.072 (2) | 0.061 (2) | 0.0580 (19) | −0.013 (2) | 0.0223 (19) | −0.0129 (17) |
| C1 | 0.044 (2) | 0.049 (2) | 0.0365 (17) | 0.0042 (17) | −0.0064 (16) | 0.0009 (15) |
| C2 | 0.059 (2) | 0.065 (3) | 0.047 (2) | 0.001 (2) | −0.0013 (18) | 0.0086 (19) |
| C3 | 0.078 (3) | 0.064 (3) | 0.085 (4) | −0.007 (3) | 0.003 (3) | 0.029 (3) |
| C4 | 0.103 (4) | 0.054 (3) | 0.091 (4) | −0.018 (3) | −0.013 (3) | 0.000 (3) |
| C5 | 0.095 (4) | 0.056 (2) | 0.060 (3) | −0.009 (3) | −0.014 (3) | −0.011 (2) |
| C6 | 0.062 (2) | 0.053 (2) | 0.0380 (16) | 0.000 (2) | −0.0078 (17) | −0.0053 (17) |
| C7 | 0.080 (3) | 0.063 (3) | 0.0374 (19) | −0.005 (2) | 0.001 (2) | −0.0046 (18) |
| C8 | 0.056 (2) | 0.055 (2) | 0.0408 (18) | −0.001 (2) | −0.0037 (17) | 0.0015 (17) |
| C9 | 0.075 (3) | 0.063 (3) | 0.072 (3) | −0.012 (3) | −0.004 (3) | 0.009 (2) |
| C10 | 0.0371 (19) | 0.048 (2) | 0.0335 (16) | −0.0052 (17) | −0.0003 (14) | −0.0017 (15) |
| C11 | 0.043 (2) | 0.045 (2) | 0.0361 (17) | −0.0052 (18) | 0.0005 (15) | −0.0025 (15) |
| C12 | 0.076 (3) | 0.058 (2) | 0.0371 (17) | 0.011 (2) | −0.0050 (18) | −0.0024 (19) |
| C13 | 0.097 (4) | 0.055 (3) | 0.052 (2) | 0.024 (3) | −0.002 (3) | 0.004 (2) |
| C14 | 0.078 (3) | 0.048 (2) | 0.048 (2) | 0.000 (2) | 0.011 (2) | −0.0049 (18) |
| C15 | 0.044 (2) | 0.054 (2) | 0.0421 (17) | −0.006 (2) | 0.0031 (15) | −0.0076 (18) |
| C16 | 0.0395 (19) | 0.049 (2) | 0.0372 (18) | −0.0048 (16) | −0.0032 (15) | −0.0011 (15) |
| C17 | 0.062 (3) | 0.072 (3) | 0.043 (2) | −0.010 (2) | 0.0067 (19) | −0.017 (2) |
| C18 | 0.062 (3) | 0.078 (3) | 0.052 (2) | −0.009 (3) | −0.002 (2) | −0.008 (2) |
| C19 | 0.064 (3) | 0.109 (4) | 0.080 (3) | −0.009 (3) | −0.005 (3) | −0.014 (3) |
| C20 | 0.085 (4) | 0.062 (3) | 0.083 (3) | −0.017 (3) | 0.015 (3) | −0.010 (3) |
| C21 | 0.112 (5) | 0.081 (4) | 0.095 (4) | −0.022 (4) | −0.008 (4) | 0.020 (3) |
| C22 | 0.230 (11) | 0.117 (6) | 0.106 (6) | −0.047 (7) | −0.025 (6) | 0.036 (5) |
| Cl1—C14 | 1.731 (4) | C7—H7B | 0.9700 |
| S1—O3 | 1.420 (3) | C8—C9 | 1.493 (6) |
| S1—O2 | 1.433 (3) | C8—H8 | 0.9800 |
| S1—N3 | 1.607 (4) | C9—H9A | 0.9600 |
| S1—C15 | 1.783 (4) | C9—H9B | 0.9600 |
| O1—C10 | 1.230 (4) | C9—H9C | 0.9600 |
| N1—N2 | 1.405 (4) | C10—C11 | 1.499 (5) |
| N1—C1 | 1.408 (5) | C11—C12 | 1.379 (5) |
| N1—C8 | 1.494 (5) | C11—C16 | 1.391 (5) |
| N2—C10 | 1.346 (4) | C12—C13 | 1.381 (6) |
| N2—H2A | 0.9100 | C12—H12 | 0.9300 |
| N3—C20 | 1.465 (6) | C13—C14 | 1.385 (6) |
| N3—C17 | 1.467 (5) | C13—H13 | 0.9300 |
| C1—C2 | 1.365 (5) | C14—C15 | 1.395 (6) |
| C1—C6 | 1.388 (5) | C15—C16 | 1.384 (5) |
| C2—C3 | 1.391 (7) | C16—H16 | 0.9300 |
| C2—H2 | 0.9300 | C17—C18 | 1.468 (6) |
| C3—C4 | 1.376 (8) | C17—H17A | 0.9700 |
| C3—H3 | 0.9300 | C17—H17B | 0.9700 |
| C4—C5 | 1.376 (7) | C18—C19 | 1.154 (7) |
| C4—H4 | 0.9300 | C19—H19 | 0.9300 |
| C5—C6 | 1.373 (6) | C20—C21 | 1.465 (8) |
| C5—H5 | 0.9300 | C20—H20A | 0.9700 |
| C6—C7 | 1.507 (6) | C20—H20B | 0.9700 |
| C7—C8 | 1.531 (5) | C21—C22 | 1.165 (9) |
| C7—H7A | 0.9700 | C22—H22 | 0.9300 |
| O3—S1—O2 | 119.5 (2) | C7—C8—H8 | 109.1 |
| O3—S1—N3 | 107.43 (18) | C8—C9—H9A | 109.5 |
| O2—S1—N3 | 107.1 (2) | C8—C9—H9B | 109.5 |
| O3—S1—C15 | 108.8 (2) | H9A—C9—H9B | 109.5 |
| O2—S1—C15 | 105.70 (18) | C8—C9—H9C | 109.5 |
| N3—S1—C15 | 107.79 (19) | H9A—C9—H9C | 109.5 |
| N2—N1—C1 | 117.2 (3) | H9B—C9—H9C | 109.5 |
| N2—N1—C8 | 112.1 (3) | O1—C10—N2 | 123.6 (3) |
| C1—N1—C8 | 107.0 (3) | O1—C10—C11 | 121.5 (3) |
| C10—N2—N1 | 120.2 (3) | N2—C10—C11 | 114.9 (3) |
| C10—N2—H2A | 120.7 | C12—C11—C16 | 119.1 (3) |
| N1—N2—H2A | 117.7 | C12—C11—C10 | 123.2 (3) |
| C20—N3—C17 | 117.1 (4) | C16—C11—C10 | 117.5 (3) |
| C20—N3—S1 | 119.8 (3) | C11—C12—C13 | 120.8 (4) |
| C17—N3—S1 | 122.9 (3) | C11—C12—H12 | 119.6 |
| C2—C1—C6 | 122.2 (4) | C13—C12—H12 | 119.6 |
| C2—C1—N1 | 128.3 (3) | C12—C13—C14 | 119.9 (4) |
| C6—C1—N1 | 109.5 (3) | C12—C13—H13 | 120.1 |
| C1—C2—C3 | 117.2 (4) | C14—C13—H13 | 120.1 |
| C1—C2—H2 | 121.4 | C13—C14—C15 | 120.2 (4) |
| C3—C2—H2 | 121.4 | C13—C14—Cl1 | 116.7 (3) |
| C4—C3—C2 | 121.5 (5) | C15—C14—Cl1 | 123.0 (3) |
| C4—C3—H3 | 119.3 | C16—C15—C14 | 119.0 (3) |
| C2—C3—H3 | 119.3 | C16—C15—S1 | 117.1 (3) |
| C5—C4—C3 | 120.1 (4) | C14—C15—S1 | 123.9 (3) |
| C5—C4—H4 | 120.0 | C15—C16—C11 | 121.0 (4) |
| C3—C4—H4 | 120.0 | C15—C16—H16 | 119.5 |
| C6—C5—C4 | 119.5 (4) | C11—C16—H16 | 119.5 |
| C6—C5—H5 | 120.2 | N3—C17—C18 | 112.7 (4) |
| C4—C5—H5 | 120.2 | N3—C17—H17A | 109.0 |
| C5—C6—C1 | 119.5 (4) | C18—C17—H17A | 109.0 |
| C5—C6—C7 | 132.0 (4) | N3—C17—H17B | 109.0 |
| C1—C6—C7 | 108.4 (3) | C18—C17—H17B | 109.0 |
| C6—C7—C8 | 103.0 (3) | H17A—C17—H17B | 107.8 |
| C6—C7—H7A | 111.2 | C19—C18—C17 | 178.4 (6) |
| C8—C7—H7A | 111.2 | C18—C19—H19 | 180.0 |
| C6—C7—H7B | 111.2 | N3—C20—C21 | 110.8 (4) |
| C8—C7—H7B | 111.2 | N3—C20—H20A | 109.5 |
| H7A—C7—H7B | 109.1 | C21—C20—H20A | 109.5 |
| C9—C8—N1 | 112.8 (3) | N3—C20—H20B | 109.5 |
| C9—C8—C7 | 115.1 (4) | C21—C20—H20B | 109.5 |
| N1—C8—C7 | 101.3 (3) | H20A—C20—H20B | 108.1 |
| C9—C8—H8 | 109.1 | C22—C21—C20 | 175.4 (9) |
| N1—C8—H8 | 109.1 | C21—C22—H22 | 180.0 |
| C1—N1—N2—C10 | −102.3 (4) | C6—C7—C8—N1 | −28.9 (4) |
| C8—N1—N2—C10 | 133.4 (4) | N1—N2—C10—O1 | 8.2 (6) |
| O3—S1—N3—C20 | 163.9 (4) | N1—N2—C10—C11 | −170.0 (3) |
| O2—S1—N3—C20 | 34.4 (4) | O1—C10—C11—C12 | −162.4 (4) |
| C15—S1—N3—C20 | −79.0 (4) | N2—C10—C11—C12 | 15.8 (5) |
| O3—S1—N3—C17 | −21.8 (4) | O1—C10—C11—C16 | 13.2 (5) |
| O2—S1—N3—C17 | −151.4 (3) | N2—C10—C11—C16 | −168.6 (3) |
| C15—S1—N3—C17 | 95.3 (4) | C16—C11—C12—C13 | −0.4 (6) |
| N2—N1—C1—C2 | 32.1 (6) | C10—C11—C12—C13 | 175.2 (4) |
| C8—N1—C1—C2 | 159.0 (4) | C11—C12—C13—C14 | 0.1 (8) |
| N2—N1—C1—C6 | −150.6 (3) | C12—C13—C14—C15 | 0.6 (7) |
| C8—N1—C1—C6 | −23.8 (4) | C12—C13—C14—Cl1 | −179.4 (4) |
| C6—C1—C2—C3 | −0.9 (6) | C13—C14—C15—C16 | −1.1 (6) |
| N1—C1—C2—C3 | 176.0 (4) | Cl1—C14—C15—C16 | 178.9 (3) |
| C1—C2—C3—C4 | 0.2 (7) | C13—C14—C15—S1 | −180.0 (4) |
| C2—C3—C4—C5 | 0.4 (9) | Cl1—C14—C15—S1 | 0.0 (5) |
| C3—C4—C5—C6 | −0.2 (8) | O3—S1—C15—C16 | −136.8 (3) |
| C4—C5—C6—C1 | −0.4 (7) | O2—S1—C15—C16 | −7.2 (3) |
| C4—C5—C6—C7 | 179.0 (5) | N3—S1—C15—C16 | 107.0 (3) |
| C2—C1—C6—C5 | 1.0 (7) | O3—S1—C15—C14 | 42.1 (4) |
| N1—C1—C6—C5 | −176.4 (4) | O2—S1—C15—C14 | 171.7 (3) |
| C2—C1—C6—C7 | −178.6 (4) | N3—S1—C15—C14 | −74.1 (4) |
| N1—C1—C6—C7 | 4.0 (5) | C14—C15—C16—C11 | 0.8 (6) |
| C5—C6—C7—C8 | −163.0 (5) | S1—C15—C16—C11 | 179.8 (3) |
| C1—C6—C7—C8 | 16.5 (5) | C12—C11—C16—C15 | −0.1 (6) |
| N2—N1—C8—C9 | −74.0 (4) | C10—C11—C16—C15 | −175.9 (3) |
| C1—N1—C8—C9 | 156.2 (4) | C20—N3—C17—C18 | 52.7 (6) |
| N2—N1—C8—C7 | 162.5 (3) | S1—N3—C17—C18 | −121.7 (4) |
| C1—N1—C8—C7 | 32.7 (4) | C17—N3—C20—C21 | 58.3 (6) |
| C6—C7—C8—C9 | −150.9 (4) | S1—N3—C20—C21 | −127.1 (5) |
| Cg3 is the centroid of the C11–C16 benzene ring. |
| D—H···A | D—H | H···A | D···A | D—H···A |
| N2—H2A···O1i | 0.91 | 1.98 | 2.812 (4) | 152 |
| C7—H7a···Cg3i | 0.97 | 2.90 | 3.753 (5) | 147 |
| Symmetry code: (i) x+1/2, −y+3/2, −z+1. |
Acknowledgements
The support of NSF-MRI Grant #1228232 for the purchase of the diffractometer and Tulane University for support of the Tulane Crystallography Laboratory are gratefully acknowledged. Author contributions are as follows. Conceptualization, YR; methodology, AA; investigation, YR, WA; writing (original draft), JTM and YR; writing (review and editing of the manuscript), YR; Supervision, YR; crystal-structure determination and validation, JTM; Resource, CKM
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