research communications
Synthesis, crystal structure and Hirshfeld surface analysis of (Z)-2-({amino[6-phenyl-3-(4-methylphenyl)-1,2,4-triazin-5-yl]methylidene}amino)-6-methoxybenzo[d]thiazole-4,7-diyl diacetate
aThe Ural Federal University, named after the first president of Russia, B. N. Yeltsin, Mira. 19 st., 620002, Yekaterinburg, Russian Federation, bPostovsky Institute of Organic Synthesis, Ural Branch of the Russian Academy of Sciences, Sof'i Kovalevskoy 22 st., 620137, Yekaterinburg, Russian Federation, cSirius University of Science and Technology, Olympic Avenue 1, 354340, Sirius Federal Territory, Russian Federation, dM. N. Mikheev Institute of Metal Physics of the Ural Branch of the Russian Academy of Sciences, Sof'i Kovalevskoy 18 st., 620108, Yekaterinburg, Russian Federation, eDepartment of Physics, Jimma University, Jimma, Ethiopia, fDepartment of Physics, Faculty of Sciences, Erciyes University, 38039 Kayseri, Türkiye, gAzerbaijan State Pedagogical University, 68 Uzeyir Hajibeyov St., AZ 1000, Baku, Azerbaijan, hScientific Research Centre (SRC), Azerbaijan Medical University, A. Kasumzade, St. 14, AZ 1022, Baku, Azerbaijan, and iScientific Research Center, Baku Engineering University, Hasan Aliyev str. 120, AZ0101, Khirdalan, Absheron, Azerbaijan
*Correspondence e-mail: [email protected]
The stable conformation of the title molecule, C29H24N6O5S, is caused by two intramolecular N—H⋯N hydrogen bonds producing fused S(5) and S(6) rings. In the crystal, molecules are connected by intermolecular N—H⋯O interactions along the b-axis direction, forming C(9) chains. Furthermore, there are π–π interactions [centroid–to-centroid distance = 3.8200 (12) Å] between the benzene ring of the p-tolyl group and the 1,2,4-triazine ring in the same direction. As a result, the molecules form ribbons along the b-axis direction,. A Hirshfeld surface analysis was performed, showing the predominance of H⋯H, O⋯H/H⋯O, C⋯H/H⋯C and N⋯H/H⋯N contacts.
Keywords: crystal structure; 1,3-benzothiazole; 1,2,4-triazine; hydrogen bonds; disorder; Hirshfeld surface analysis.
CCDC reference: 2584107
1. Chemical context
Metal-mediated or metal-free activation of nitriles (C≡N triple bonds) is a powerful synthetic strategy for the functionalization of organonitriles to form new N-heterocycles, ligands, metal complexes, catalysts, etc. (Kopylovich et al., 2011
; Mahmudov et al., 2014
). Recently, we developed a new synthetic method for functionalizing the C≡N nitrile group of 5-cyano-1,2,4-triazines with heterocyclic amines via a nucleophilic ipso-substitution reaction (Krinochkin et al., 2022
; Rammohan et al., 2021
); therefore, as a continuation of this work, we investigated 2-aminobenzothiazole as a nucleophile. It was found, that upon solvent-free interaction of 6-phenyl-3-(p-tolyl)-1,2,4-triazine-5-carbonitrile (1) with 6-methoxybenzo[d]thiazol-2-amine (2) at 423 K, the reaction yields the unexpected product (Z)-N′-(6-methoxybenzo[d]thiazol-2-yl)-6-phenyl-3-(p-tolyl)-1,2,4-triazine-5-carboximidamide (3). An attempt of oxidative cyclization of a six-membered intramolecular resonance-assisted hydrogen-bonding synthon (Mahmudov & Pombeiro, 2016
) in (3) with lead tetraacetate in a benzene–acetic acid mixture (Mishra et al., 2007
) resulted in the diacylated product (Z)-2-({amino[6-phenyl-3-(p-tolyl)-1,2,4-triazin-5-yl]methylene}amino)-6-methoxybenzo[d]thiazole-4,7-diyl diacetate (4). The structures of the obtained compounds were confirmed by 1H NMR spectroscopy, mass spectrometry, and elemental analysis, as well as by single-crystal X-ray diffraction for compound (4).
2. Structural commentary
The title molecule (Fig. 1
) has a stable conformation due to two intramolecular N—H⋯N hydrogen bonds that produce fused S(5) and S(6) rings (Table 1
; Bernstein et al., 1995
). In a six-membered resonance-assisted hydrogen-bonding (RAHB) ring, the N3—H3B⋯N1 bond with [N⋯N distance = 2.676 (2) Å] falls in the N⋯N distance range [2.542–2.897 Å] observed for other supramolecular synthons (Gurbanov et al., 2020
), and indicates a low delocalization within the heterodienic moiety. The N—H⋯N angle of 130.8 (19)° differs significantly from the average O—H⋯O angle (149°; Bertolasi et al., 1993
) of β-diketone enols involved in similar intramolecular RAHB.
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Figure 1
Molecular structure of the title compound showing the atomic labelling. Displacement ellipsoids are drawn at the 30% probability level. |
The 1,3-benzothiazole ring system (S1/N1/C1–C7) is essentially planar with a r.m.s. deviation of 0.0255 Å. The least-squares plane of this ring system forms angles of 17.2 (1), 81.2 (1), and 20.4 (1)° with the ring planes of the 1,2,4-triazine ring (N4–N6/C10–C12) and the benzene ring planes (C13–C18 and C20–C25) of its attached phenyl and 4-methylphenyl groups, respectively. The rings (C13–C18 and C20–C25) of the phenyl and 4-methylphenyl groups form angles of 62.1 (1)° with each other, while they make angles of 64.0 (1) and 5.8 (1)°, respectively, with the 1,2,4-triazine ring plane (N4–N6/C10–C12).
3. Supramolecular features
In the crystal, the molecules, arranged at angles of approximately 45° to the a-axis direction and at equal intervals, are linked by intermolecular N—H⋯O interactions (Table 1
) along the b-axis direction, forming C(9) chains. In addition, there are π-π interactions [Cg2⋯Cg5a = 3.8200 (12) Å, shift = 1.107 Å and Cg5⋯Cg2b = 3.8200 (12) Å, shift = 0.963 Å; symmetry codes (a) x, −1 + y, z and (b) x, 1 + y, z] between the centroids Cg2 and Cg5 of the 1,2,4-triazine ring and the benzene ring of the p-tolyl group, along the b-axis direction (Fig. 2
a,b). Thus, the molecules form ribbons along the b-axis direction. The cohesion of the packing is ensured by C—H⋯O interactions between these ribbons.
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Figure 2
(a) Partial view of N—H⋯O hydrogen bonds and π–π interactions (dashed lines) in the unit cell of the title compound. H atoms not involved in hydrogen bonding and the minor component of the disordered O5 atom are omitted. (b) A different view of these interactions within a unit cell. |
4. Hirshfeld surface analysis
A Hirshfeld surface analysis and the corresponding fingerprint plots were generated using CrystalExplorer software (Spackman et al., 2021
) to further investigate and quantify the contributions of the various intermolecular interactions in the crystal. The Hirshfeld surface mapped over dnorm using a fixed colour scale of −0.3005 (red) to 1.3598 (blue) a.u. and corresponding colours representing various interactions is shown in Fig. 3
. The two-dimensional fingerprint plots for all intermolecular interactions and those delineated into specific contacts are shown in Fig. 4
. The largest contribution comes from H⋯H contacts at 40.3% of the total, which is consistent with the significant hydrogen content of the molecule. The next most important contact is O⋯H/H⋯O at 20.1%, which primarily comes from the intramolecular O—H⋯O and intermolecular N—H⋯O as well as C—H⋯O interactions. The C⋯H/H⋯C interactions account for 15.4% while N⋯H/H⋯N contacts contribute 8.2%, followed by N⋯C/C⋯N contacts contributing 4.0%. Further, 3.9, 2.2, 1.2, 1.1, 0.5, 0.2 and 0.1% contributions corresponding to S⋯H/H⋯S, O⋯C/C⋯O, S⋯C/C⋯S, O⋯N/N⋯O, N⋯N, S⋯O/O⋯S and S⋯N/N⋯S contacts, respectively, are also observed.
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Figure 3
Hirshfeld surface of the title compound mapped over dnorm. |
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Figure 4
Hirshfeld surface mapped over dnorm and the corresponding two-dimensional fingerprint plots for the title compound. (a) All interactions (100%) and the relative contributions of (b) H⋯H (40.3%), (c) O⋯H/H⋯O (20.1%), (d) C⋯H/H⋯C (15.4%) and (e) N⋯H/H⋯N (8.2%) interactions to the Hirshfeld surface are indicated. The di and de values are the closest internal and external distances (in Å) from given points on the Hirshfeld surface. |
5. Database survey
A search of the Cambridge Structural Database (CSD, Version 6.00, update of April 2025; Groom et al., 2016
) for the N′-(1,3-benzothiazol-2-yl)-1,2,4-triazine-5-carboximidamide unit generated six closely related compounds: (Z)-N-(4-methoxybenzo[d]thiazol-2-yl)-3,6-di-p-tolyl-1,2,4-triazine-5-carboximidamide (QARLOP: Shtaitz et al., 2026
), N-[(1,3-benzothiazol-2-yl)carbamothioyl]-4-bromobenzamide (JOMGOL: Sow et al., 2024
), N′-(1,3-benzothiazol-2-yl)benzenesulfonohydrazide (COCFOS: Baddeley et al., 2019
), N-(1,3-benzothiazol-2-yl)acetamide (TIJPAF: Nayak et al., 2013
), 2-[(6-methoxy-1,3-benzothiazol-2-yl)carbonoimidoyl]phenol (SUFFEG: Hijji et al., 2015
) and N-(4,6-dimethylpyrimidin-2-yl)-1,3-benzothiazol-2-amine (YAJBUI: Mohamed et al., 2011
).
QARLOP crystallizes in the triclinic P space group while JOMGOL and YAJBUI crystallize in the monoclinic P21/n space group. COCFOS has two molecules (A and B) in the asymmetric unit and crystallizes in the orthorhombic space group Pbca. TIJPAF has two molecules (A and B) in the asymmetric unit and crystallizes in the monoclinic space group P21/c. SUFFEG has two molecules in the asymmetric unit and crystallizes in the orthorhombic space group Pna21.
In the crystal of QARLOP, intermolecular C—H⋯O and C—H⋯N hydrogen bonds form layers parallel to the (010) plane. Furthermore, π–π and C—H⋯π [centroid-to-centroid distance = 3.7380 (12) Å] interactions connect molecules, forming ribbons along the a-axis direction. In JOMGOL, intermolecular C—H⋯N, C—H⋯S, and N—H⋯S hydrogen bonds form layers parallel to the ac plane. In YAJBUI, N—H⋯N hydrogen bonds link the molecules, generating a centrosymmetric cyclic hydrogen-bonded dimer with an R22(8) motif. In COCFOS, the A and B molecules in the asymmetric unit are linked into a supramolecular dimer via pairwise hydrazinyl-N—H⋯N(thiazolyl) hydrogen bonds. Hydrazinyl-N—H⋯O(sulfonyl) hydrogen bonds between A molecules assemble the dimers into chains along the a-axis direction, while links between centrosymmetrically related B molecules, leading to eight-membered {⋯HNSO}2 synthons, link the molecules along [001]. The result is an undulating supramolecular layer. Layers stack along the b-axis direction with benzothiazole-C—H⋯O(sulfonyl) points of contact being evident. In TIJPAF, the A and B molecules in the asymmetric unit are linked by N—H⋯N hydrogen-bond pairs, forming R22(8) dimer motifs along the [100] axis. In SUFFEG, a pair of C—H⋯O bonds connects two molecules in the asymmetric unit with the ring motif R22(20). Weak intermolecular C—H⋯N interactions also link these dimers, forming sheets parallel to the ab plane.
6. Synthesis and crystallization
The starting compound 5-cyano-1,2,4-triazine was prepared according to a literature procedure (Kozhevnikov et al., 2002
), and a known synthetic procedure (Shtaitz et al., 2026
) was used in the synthesis of (4).
Synthesis of compound (3). 0.37 mmol of 6-phenyl-3-(p-tolyl)-1,2,4-triazine-5-carbonitrile (1) and 0.41 mmol of 6-methoxybenzo[d]thiazol-2-amine (2) were added into a round-bottom flask and the resulting mixture was heated at 423 K for 8 h under an inert atmosphere. The product was isolated by column chromatography (eluent AcOEt:CDCl3 = 1:9; Rf 0.7 0.4). The pure product (Z)-N′-(6-methoxybenzo[d]thiazol-2-yl)-6-phenyl-3-(p-tolyl)-1,2,4-triazine-5-carboximidamide (3) was obtained by recrystallization from ethanol solution. Yield 72 mg (43%). 1H NMR (400 MHz, CDCl3): δ = 2.48 (s, 3H, CH3), 3.84 (s, 3H, OCH3), 6.99–7.02 (dd, 1H, H-5 (benzothiazole), J 8.9 2.6 Hz,), 7.38–7.42 (m, 2H, C6H4CH3), 7.45–7.50 (m, 3H, Ph), 7.56 (br. s, 1H, NH), 7.69–7.72 [m, 1H, H-4 (benzothiazole)], 7.77–7.80 (m, 2H, Ph), 8.49–8.53 (m, C6H4CH3), 10.18 (br. s, 1H, NH). Mass-spectrum, m/z (Irel, %): m/z: 453.15 [M + H]+ (100). Found, %: C 66.34, H 4.44, N 18.58. C25H20N6OS. Calculated, %: C 66.35, H 4.45, N 18.57.
Synthesis of compound (4): To a solution of 203 mg (0.45 mmol) of compound (3) in 15 mL of benzene and 5 mL of glacial acetic acid, 399 mg (0.90 mmol) of lead tetraacetate were added. The resulting mixture was stirred at 353 K for 24 h. The solvents were removed under reduced pressure (Fig. 5
). The product was isolated by column chromatography (eluent AcOEt:CDCl3 = 0.5:9.5; Rf 0.6). A single crystal of compound (4) was obtained by slow evaporation of a chloroform solution. (4): Yield 77 mg (30%). 1H NMR (300 MHz, DMSO-d6): δ = 2.34 (s, 3H, OAc), 2.43 (s, 3H, OAc), 2.48 (s, 3H, CH3), 3.87 (s, 3H, OCH3), 6.87 (s, 1H, H-5 (benzothiazole), 7.38–7.41 (m, 2H, C6H4CH3), 7.45–7.52 (m, 3H, Ph), 7.69–7.77 (m, 3H, Ph+NH), 8.48–8.52 (m, C6H4CH3), 9.99 (br. s, 1H, NH). Mass-spectrum, m/z (Irel, %): m/z: 569.15 [M+H]+ (100). Found, %: C 61.28, H 4.24, N 14.77. C29H24N6O5S. Calculated, %: C 61.26, H 4.25, N 14.78.
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Figure 5
Reaction scheme for the title compound. |
7. Refinement
Crystal data, data collection and structure refinement details are summarized in Table 2
. The H atoms of the NH2 groups were found in difference-Fourier maps and were refined with Uiso(H) = 1.2Ueq(N). The C-bound H atoms were positioned geometrically (C—H = 0.93–0.96 Å) and refined using a riding model, with Uiso(H) = 1.2 or 1.5Ueq(C). The oxygen atom (O5) of the carbonyl group exhibits disorder at two positions with a final occupancy ratio of 0.617 (4):0.383 (4). The disordered atom was modelled using SADI and EADP constraints.
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Supporting information
CCDC reference: 2584107
Crystal structure: contains datablock I. DOI: https://doi.org/10.1107/S2056989026008972/ee2032sup1.cif
Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2056989026008972/ee2032Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2056989026008972/ee2032Isup3.cml
| C29H24N6O5S | F(000) = 1184 |
| Mr = 568.60 | Dx = 1.351 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| a = 19.7610 (5) Å | Cell parameters from 14058 reflections |
| b = 5.8264 (2) Å | θ = 1.7–22.1° |
| c = 24.3643 (5) Å | µ = 0.17 mm−1 |
| β = 94.711 (2)° | T = 293 K |
| V = 2795.72 (13) Å3 | Prism, red |
| Z = 4 | 0.41 × 0.25 × 0.16 mm |
| XtaLAB Synergy, Dualflex, HyPix diffractometer | 7321 independent reflections |
| Radiation source: micro-focus sealed X-ray tube, PhotonJet (Mo) X-ray Source | 3876 reflections with I > 2σ(I) |
| Mirror monochromator | Rint = 0.094 |
| Detector resolution: 10.0000 pixels mm-1 | θmax = 29.6°, θmin = 1.7° |
| ω scans | h = −26→27 |
| Absorption correction: multi-scan (CrysAlisPro; Rigaku OD, 2021) | k = −8→8 |
| Tmin = 0.951, Tmax = 0.974 | l = −33→32 |
| 94505 measured reflections |
| Refinement on F2 | Primary atom site location: dual |
| Least-squares matrix: full | Hydrogen site location: mixed |
| R[F2 > 2σ(F2)] = 0.052 | H atoms treated by a mixture of independent and constrained refinement |
| wR(F2) = 0.150 | w = 1/[σ2(Fo2) + (0.0629P)2 + 0.2039P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.04 | (Δ/σ)max = 0.001 |
| 7321 reflections | Δρmax = 0.21 e Å−3 |
| 384 parameters | Δρmin = −0.19 e Å−3 |
| 1 restraint |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| x | y | z | Uiso*/Ueq | Occ. (<1) | |
| C1 | 0.21371 (10) | −0.0169 (3) | 0.37633 (8) | 0.0501 (5) | |
| C2 | 0.17864 (10) | −0.2051 (3) | 0.44712 (8) | 0.0513 (5) | |
| C3 | 0.14532 (10) | −0.3400 (3) | 0.40576 (8) | 0.0506 (5) | |
| C4 | 0.10892 (10) | −0.5327 (3) | 0.41903 (8) | 0.0549 (5) | |
| C5 | 0.10454 (11) | −0.5896 (4) | 0.47403 (9) | 0.0634 (6) | |
| C6 | 0.13858 (12) | −0.4578 (4) | 0.51514 (9) | 0.0684 (6) | |
| H6 | 0.136281 | −0.497031 | 0.551938 | 0.082* | |
| C7 | 0.17540 (11) | −0.2705 (4) | 0.50151 (8) | 0.0599 (5) | |
| C8 | 0.27976 (17) | −0.1373 (5) | 0.54359 (10) | 0.0828 (8) | |
| C9 | 0.27880 (10) | 0.3049 (3) | 0.36523 (8) | 0.0482 (5) | |
| C10 | 0.31600 (10) | 0.4545 (3) | 0.32773 (7) | 0.0486 (5) | |
| C11 | 0.39337 (10) | 0.7418 (4) | 0.32262 (8) | 0.0526 (5) | |
| C12 | 0.31716 (10) | 0.4223 (4) | 0.27052 (8) | 0.0536 (5) | |
| C13 | 0.27288 (12) | 0.2688 (4) | 0.23534 (8) | 0.0579 (5) | |
| C14 | 0.30056 (15) | 0.0875 (4) | 0.20888 (10) | 0.0819 (7) | |
| H14 | 0.347286 | 0.064348 | 0.212072 | 0.098* | |
| C15 | 0.2585 (2) | −0.0606 (5) | 0.17743 (12) | 0.1074 (11) | |
| H15 | 0.277110 | −0.187109 | 0.160910 | 0.129* | |
| C16 | 0.1911 (2) | −0.0243 (6) | 0.17039 (11) | 0.1051 (10) | |
| H16 | 0.163484 | −0.124743 | 0.149010 | 0.126* | |
| C17 | 0.16345 (16) | 0.1595 (6) | 0.19459 (11) | 0.0970 (9) | |
| H17 | 0.117027 | 0.186958 | 0.189062 | 0.116* | |
| C18 | 0.20404 (13) | 0.3049 (5) | 0.22724 (10) | 0.0787 (7) | |
| H18 | 0.184695 | 0.429212 | 0.244069 | 0.094* | |
| C19 | 0.30912 (18) | 0.0520 (6) | 0.57940 (12) | 0.1174 (11) | |
| H19A | 0.306157 | 0.193856 | 0.559294 | 0.176* | |
| H19B | 0.355842 | 0.018822 | 0.590444 | 0.176* | |
| H19C | 0.284211 | 0.065047 | 0.611465 | 0.176* | |
| C20 | 0.43176 (10) | 0.9356 (4) | 0.34862 (8) | 0.0545 (5) | |
| C21 | 0.42356 (11) | 0.9989 (4) | 0.40250 (9) | 0.0660 (6) | |
| H21 | 0.393252 | 0.918715 | 0.422600 | 0.079* | |
| C22 | 0.45978 (13) | 1.1791 (4) | 0.42650 (10) | 0.0745 (7) | |
| H22 | 0.453821 | 1.217824 | 0.462820 | 0.089* | |
| C23 | 0.50483 (11) | 1.3039 (4) | 0.39798 (10) | 0.0690 (6) | |
| C24 | 0.51209 (12) | 1.2416 (4) | 0.34442 (10) | 0.0771 (7) | |
| H24 | 0.541801 | 1.323756 | 0.324156 | 0.093* | |
| C25 | 0.47656 (12) | 1.0611 (4) | 0.32009 (9) | 0.0716 (6) | |
| H25 | 0.482770 | 1.022793 | 0.283793 | 0.086* | |
| C26 | 0.54425 (14) | 1.5043 (5) | 0.42390 (12) | 0.0943 (8) | |
| H26A | 0.571666 | 1.571426 | 0.397380 | 0.141* | |
| H26B | 0.572946 | 1.451480 | 0.455052 | 0.141* | |
| H26C | 0.513155 | 1.617094 | 0.435718 | 0.141* | |
| C27 | 0.06120 (16) | −0.8397 (5) | 0.54036 (11) | 0.0985 (9) | |
| H27A | 0.036967 | −0.981971 | 0.542078 | 0.148* | |
| H27B | 0.036742 | −0.720809 | 0.557540 | 0.148* | |
| H27C | 0.105512 | −0.855784 | 0.559273 | 0.148* | |
| C28 | 0.02414 (14) | −0.6465 (6) | 0.35039 (12) | 0.0957 (9) | |
| C29 | 0.00301 (16) | −0.8326 (5) | 0.31195 (13) | 0.1107 (11) | |
| H29A | 0.036148 | −0.850600 | 0.285579 | 0.166* | |
| H29B | −0.040186 | −0.795503 | 0.293116 | 0.166* | |
| H29C | −0.000710 | −0.973075 | 0.332058 | 0.166* | |
| N1 | 0.21598 (8) | −0.0226 (3) | 0.42984 (6) | 0.0517 (4) | |
| N2 | 0.24549 (8) | 0.1299 (3) | 0.34327 (6) | 0.0532 (4) | |
| N3 | 0.28487 (9) | 0.3671 (3) | 0.41783 (7) | 0.0552 (4) | |
| H3A | 0.3075 (11) | 0.491 (4) | 0.4276 (9) | 0.066* | |
| H3B | 0.2614 (11) | 0.277 (4) | 0.4415 (9) | 0.066* | |
| N4 | 0.35295 (8) | 0.6197 (3) | 0.35291 (6) | 0.0510 (4) | |
| N5 | 0.40296 (10) | 0.6934 (3) | 0.27026 (7) | 0.0698 (5) | |
| N6 | 0.36328 (10) | 0.5355 (3) | 0.24410 (7) | 0.0698 (5) | |
| O1 | 0.20970 (9) | −0.1371 (3) | 0.54256 (6) | 0.0756 (5) | |
| O2 | 0.31015 (11) | −0.2704 (4) | 0.51763 (9) | 0.1052 (7) | |
| O3 | 0.06773 (9) | −0.7806 (3) | 0.48390 (7) | 0.0806 (5) | |
| O4 | 0.08296 (7) | −0.6852 (3) | 0.37831 (6) | 0.0671 (4) | |
| O5 | 0.0017 (2) | −0.4394 (7) | 0.34761 (19) | 0.1130 (14) | 0.617 (4) |
| O5A | −0.0205 (3) | −0.5585 (12) | 0.3785 (3) | 0.1130 (14) | 0.383 (4) |
| S1 | 0.16294 (3) | −0.23292 (9) | 0.34217 (2) | 0.05618 (17) |
| U11 | U22 | U33 | U12 | U13 | U23 | |
| C1 | 0.0507 (11) | 0.0490 (11) | 0.0500 (11) | 0.0021 (9) | 0.0011 (9) | −0.0068 (9) |
| C2 | 0.0538 (12) | 0.0486 (11) | 0.0514 (11) | −0.0045 (9) | 0.0048 (9) | −0.0061 (9) |
| C3 | 0.0480 (11) | 0.0484 (11) | 0.0546 (11) | 0.0008 (9) | −0.0008 (9) | −0.0062 (9) |
| C4 | 0.0505 (11) | 0.0480 (12) | 0.0650 (13) | −0.0035 (9) | −0.0036 (9) | −0.0115 (10) |
| C5 | 0.0621 (13) | 0.0540 (13) | 0.0746 (15) | −0.0123 (11) | 0.0078 (11) | −0.0011 (11) |
| C6 | 0.0837 (16) | 0.0635 (15) | 0.0586 (13) | −0.0206 (12) | 0.0094 (11) | −0.0043 (11) |
| C7 | 0.0716 (14) | 0.0574 (13) | 0.0507 (12) | −0.0142 (11) | 0.0054 (10) | −0.0086 (10) |
| C8 | 0.106 (2) | 0.084 (2) | 0.0546 (14) | −0.0285 (17) | −0.0156 (14) | 0.0050 (13) |
| C9 | 0.0467 (11) | 0.0510 (12) | 0.0470 (11) | 0.0048 (9) | 0.0034 (8) | −0.0007 (9) |
| C10 | 0.0474 (11) | 0.0502 (11) | 0.0482 (11) | 0.0054 (9) | 0.0049 (9) | −0.0010 (9) |
| C11 | 0.0492 (11) | 0.0595 (13) | 0.0497 (11) | −0.0002 (10) | 0.0078 (9) | 0.0014 (9) |
| C12 | 0.0573 (12) | 0.0552 (12) | 0.0484 (11) | 0.0045 (10) | 0.0060 (9) | −0.0005 (9) |
| C13 | 0.0744 (15) | 0.0578 (13) | 0.0412 (10) | −0.0001 (11) | 0.0042 (10) | −0.0011 (9) |
| C14 | 0.109 (2) | 0.0693 (17) | 0.0663 (14) | 0.0119 (15) | 0.0009 (14) | −0.0127 (13) |
| C15 | 0.166 (3) | 0.074 (2) | 0.0796 (19) | 0.007 (2) | −0.005 (2) | −0.0281 (15) |
| C16 | 0.153 (3) | 0.090 (2) | 0.0660 (17) | −0.030 (2) | −0.0258 (19) | −0.0088 (16) |
| C17 | 0.091 (2) | 0.119 (3) | 0.0759 (17) | −0.0212 (18) | −0.0224 (15) | −0.0093 (18) |
| C18 | 0.0767 (17) | 0.0887 (19) | 0.0687 (15) | −0.0005 (14) | −0.0063 (13) | −0.0146 (13) |
| C19 | 0.152 (3) | 0.104 (2) | 0.0905 (19) | −0.059 (2) | −0.0240 (18) | −0.0082 (17) |
| C20 | 0.0479 (11) | 0.0624 (13) | 0.0533 (12) | −0.0021 (10) | 0.0048 (9) | 0.0010 (10) |
| C21 | 0.0655 (14) | 0.0714 (16) | 0.0623 (13) | −0.0108 (12) | 0.0122 (11) | −0.0041 (11) |
| C22 | 0.0804 (16) | 0.0771 (17) | 0.0664 (14) | −0.0115 (14) | 0.0088 (12) | −0.0146 (12) |
| C23 | 0.0580 (13) | 0.0686 (15) | 0.0793 (16) | −0.0048 (11) | −0.0018 (12) | −0.0066 (12) |
| C24 | 0.0677 (15) | 0.0888 (19) | 0.0762 (16) | −0.0219 (14) | 0.0147 (12) | −0.0011 (14) |
| C25 | 0.0703 (15) | 0.0850 (17) | 0.0605 (13) | −0.0202 (13) | 0.0115 (11) | −0.0060 (12) |
| C26 | 0.0827 (18) | 0.086 (2) | 0.112 (2) | −0.0183 (15) | −0.0043 (15) | −0.0200 (16) |
| C27 | 0.114 (2) | 0.087 (2) | 0.096 (2) | −0.0385 (18) | 0.0131 (17) | 0.0159 (16) |
| C28 | 0.0722 (17) | 0.100 (2) | 0.109 (2) | 0.0191 (16) | −0.0275 (15) | −0.0398 (18) |
| C29 | 0.099 (2) | 0.100 (2) | 0.126 (2) | −0.0037 (18) | −0.0388 (18) | −0.0402 (19) |
| N1 | 0.0569 (10) | 0.0491 (10) | 0.0489 (9) | −0.0057 (8) | 0.0031 (7) | −0.0051 (7) |
| N2 | 0.0586 (10) | 0.0508 (10) | 0.0500 (9) | −0.0047 (8) | 0.0038 (8) | −0.0033 (8) |
| N3 | 0.0621 (11) | 0.0569 (11) | 0.0469 (10) | −0.0117 (9) | 0.0064 (8) | −0.0034 (8) |
| N4 | 0.0518 (9) | 0.0542 (10) | 0.0474 (9) | −0.0014 (8) | 0.0066 (7) | −0.0017 (8) |
| N5 | 0.0754 (13) | 0.0807 (14) | 0.0555 (11) | −0.0163 (11) | 0.0188 (10) | −0.0080 (10) |
| N6 | 0.0803 (13) | 0.0765 (13) | 0.0540 (10) | −0.0130 (11) | 0.0133 (10) | −0.0072 (9) |
| O1 | 0.1031 (13) | 0.0737 (11) | 0.0502 (8) | −0.0307 (10) | 0.0067 (8) | −0.0101 (7) |
| O2 | 0.0929 (14) | 0.1154 (17) | 0.1015 (15) | −0.0004 (12) | −0.0275 (12) | −0.0177 (13) |
| O3 | 0.0867 (12) | 0.0673 (11) | 0.0879 (12) | −0.0310 (9) | 0.0085 (9) | 0.0015 (9) |
| O4 | 0.0606 (9) | 0.0546 (9) | 0.0831 (10) | −0.0025 (7) | −0.0129 (8) | −0.0165 (7) |
| O5 | 0.092 (2) | 0.085 (3) | 0.152 (4) | 0.026 (2) | −0.051 (2) | −0.031 (2) |
| O5A | 0.092 (2) | 0.085 (3) | 0.152 (4) | 0.026 (2) | −0.051 (2) | −0.031 (2) |
| S1 | 0.0613 (3) | 0.0532 (3) | 0.0525 (3) | −0.0023 (2) | −0.0044 (2) | −0.0077 (2) |
| C1—N1 | 1.301 (2) | C16—H16 | 0.9300 |
| C1—N2 | 1.363 (2) | C17—C18 | 1.374 (4) |
| C1—S1 | 1.774 (2) | C17—H17 | 0.9300 |
| C2—N1 | 1.380 (2) | C18—H18 | 0.9300 |
| C2—C7 | 1.385 (3) | C19—H19A | 0.9600 |
| C2—C3 | 1.399 (3) | C19—H19B | 0.9600 |
| C3—C4 | 1.386 (3) | C19—H19C | 0.9600 |
| C3—S1 | 1.732 (2) | C20—C25 | 1.379 (3) |
| C4—C5 | 1.390 (3) | C20—C21 | 1.386 (3) |
| C4—O4 | 1.398 (2) | C21—C22 | 1.374 (3) |
| C5—O3 | 1.362 (2) | C21—H21 | 0.9300 |
| C5—C6 | 1.391 (3) | C22—C23 | 1.381 (3) |
| C6—C7 | 1.368 (3) | C22—H22 | 0.9300 |
| C6—H6 | 0.9300 | C23—C24 | 1.373 (3) |
| C7—O1 | 1.397 (2) | C23—C26 | 1.512 (3) |
| C8—O2 | 1.193 (3) | C24—C25 | 1.372 (3) |
| C8—O1 | 1.383 (3) | C24—H24 | 0.9300 |
| C8—C19 | 1.494 (4) | C25—H25 | 0.9300 |
| C9—N2 | 1.305 (2) | C26—H26A | 0.9600 |
| C9—N3 | 1.328 (2) | C26—H26B | 0.9600 |
| C9—C10 | 1.498 (3) | C26—H26C | 0.9600 |
| C10—N4 | 1.328 (2) | C27—O3 | 1.434 (3) |
| C10—C12 | 1.408 (3) | C27—H27A | 0.9600 |
| C11—N5 | 1.335 (2) | C27—H27B | 0.9600 |
| C11—N4 | 1.336 (2) | C27—H27C | 0.9600 |
| C11—C20 | 1.474 (3) | C28—O5A | 1.269 (7) |
| C12—N6 | 1.333 (3) | C28—O5 | 1.285 (4) |
| C12—C13 | 1.475 (3) | C28—O4 | 1.317 (3) |
| C13—C14 | 1.374 (3) | C28—C29 | 1.471 (4) |
| C13—C18 | 1.375 (3) | C29—H29A | 0.9600 |
| C14—C15 | 1.385 (4) | C29—H29B | 0.9600 |
| C14—H14 | 0.9300 | C29—H29C | 0.9600 |
| C15—C16 | 1.346 (4) | N3—H3A | 0.87 (2) |
| C15—H15 | 0.9300 | N3—H3B | 0.93 (2) |
| C16—C17 | 1.358 (4) | N5—N6 | 1.336 (3) |
| N1—C1—N2 | 128.96 (18) | C8—C19—H19C | 109.5 |
| N1—C1—S1 | 115.04 (15) | H19A—C19—H19C | 109.5 |
| N2—C1—S1 | 115.99 (14) | H19B—C19—H19C | 109.5 |
| N1—C2—C7 | 124.86 (17) | C25—C20—C21 | 117.8 (2) |
| N1—C2—C3 | 116.42 (17) | C25—C20—C11 | 121.24 (18) |
| C7—C2—C3 | 118.60 (18) | C21—C20—C11 | 120.99 (18) |
| C4—C3—C2 | 120.64 (18) | C22—C21—C20 | 120.6 (2) |
| C4—C3—S1 | 130.31 (16) | C22—C21—H21 | 119.7 |
| C2—C3—S1 | 108.94 (15) | C20—C21—H21 | 119.7 |
| C3—C4—C5 | 119.52 (18) | C21—C22—C23 | 121.6 (2) |
| C3—C4—O4 | 121.12 (18) | C21—C22—H22 | 119.2 |
| C5—C4—O4 | 118.96 (18) | C23—C22—H22 | 119.2 |
| O3—C5—C4 | 116.21 (19) | C24—C23—C22 | 117.4 (2) |
| O3—C5—C6 | 123.9 (2) | C24—C23—C26 | 120.7 (2) |
| C4—C5—C6 | 119.85 (19) | C22—C23—C26 | 121.9 (2) |
| C7—C6—C5 | 120.1 (2) | C25—C24—C23 | 121.6 (2) |
| C7—C6—H6 | 120.0 | C25—C24—H24 | 119.2 |
| C5—C6—H6 | 120.0 | C23—C24—H24 | 119.2 |
| C6—C7—C2 | 121.26 (19) | C24—C25—C20 | 121.0 (2) |
| C6—C7—O1 | 120.43 (18) | C24—C25—H25 | 119.5 |
| C2—C7—O1 | 118.29 (18) | C20—C25—H25 | 119.5 |
| O2—C8—O1 | 122.5 (2) | C23—C26—H26A | 109.5 |
| O2—C8—C19 | 127.0 (3) | C23—C26—H26B | 109.5 |
| O1—C8—C19 | 110.5 (3) | H26A—C26—H26B | 109.5 |
| N2—C9—N3 | 127.71 (18) | C23—C26—H26C | 109.5 |
| N2—C9—C10 | 117.43 (16) | H26A—C26—H26C | 109.5 |
| N3—C9—C10 | 114.85 (18) | H26B—C26—H26C | 109.5 |
| N4—C10—C12 | 120.05 (17) | O3—C27—H27A | 109.5 |
| N4—C10—C9 | 114.74 (16) | O3—C27—H27B | 109.5 |
| C12—C10—C9 | 125.09 (18) | H27A—C27—H27B | 109.5 |
| N5—C11—N4 | 123.62 (19) | O3—C27—H27C | 109.5 |
| N5—C11—C20 | 117.64 (17) | H27A—C27—H27C | 109.5 |
| N4—C11—C20 | 118.70 (17) | H27B—C27—H27C | 109.5 |
| N6—C12—C10 | 118.65 (19) | O5A—C28—O4 | 114.4 (4) |
| N6—C12—C13 | 114.57 (17) | O5—C28—O4 | 118.3 (3) |
| C10—C12—C13 | 126.76 (18) | O5A—C28—C29 | 117.9 (4) |
| C14—C13—C18 | 118.5 (2) | O5—C28—C29 | 125.5 (3) |
| C14—C13—C12 | 119.9 (2) | O4—C28—C29 | 113.3 (2) |
| C18—C13—C12 | 121.6 (2) | C28—C29—H29A | 109.5 |
| C13—C14—C15 | 119.6 (3) | C28—C29—H29B | 109.5 |
| C13—C14—H14 | 120.2 | H29A—C29—H29B | 109.5 |
| C15—C14—H14 | 120.2 | C28—C29—H29C | 109.5 |
| C16—C15—C14 | 121.0 (3) | H29A—C29—H29C | 109.5 |
| C16—C15—H15 | 119.5 | H29B—C29—H29C | 109.5 |
| C14—C15—H15 | 119.5 | C1—N1—C2 | 110.51 (16) |
| C15—C16—C17 | 119.9 (3) | C9—N2—C1 | 119.31 (16) |
| C15—C16—H16 | 120.1 | C9—N3—H3A | 119.6 (14) |
| C17—C16—H16 | 120.1 | C9—N3—H3B | 115.7 (13) |
| C16—C17—C18 | 120.0 (3) | H3A—N3—H3B | 124.6 (19) |
| C16—C17—H17 | 120.0 | C10—N4—C11 | 117.49 (16) |
| C18—C17—H17 | 120.0 | C11—N5—N6 | 118.52 (17) |
| C17—C18—C13 | 120.8 (3) | C12—N6—N5 | 120.54 (17) |
| C17—C18—H18 | 119.6 | C8—O1—C7 | 116.00 (18) |
| C13—C18—H18 | 119.6 | C5—O3—C27 | 117.19 (18) |
| C8—C19—H19A | 109.5 | C28—O4—C4 | 120.97 (18) |
| C8—C19—H19B | 109.5 | C3—S1—C1 | 89.06 (9) |
| H19A—C19—H19B | 109.5 | ||
| N1—C2—C3—C4 | 177.28 (18) | N4—C11—C20—C21 | −3.5 (3) |
| C7—C2—C3—C4 | 1.1 (3) | C25—C20—C21—C22 | −0.9 (3) |
| N1—C2—C3—S1 | 0.8 (2) | C11—C20—C21—C22 | 179.7 (2) |
| C7—C2—C3—S1 | −175.45 (16) | C20—C21—C22—C23 | 0.6 (4) |
| C2—C3—C4—C5 | 1.2 (3) | C21—C22—C23—C24 | 0.1 (4) |
| S1—C3—C4—C5 | 176.86 (17) | C21—C22—C23—C26 | 179.2 (2) |
| C2—C3—C4—O4 | −171.53 (18) | C22—C23—C24—C25 | −0.6 (4) |
| S1—C3—C4—O4 | 4.2 (3) | C26—C23—C24—C25 | −179.7 (2) |
| C3—C4—C5—O3 | 179.76 (19) | C23—C24—C25—C20 | 0.3 (4) |
| O4—C4—C5—O3 | −7.4 (3) | C21—C20—C25—C24 | 0.4 (4) |
| C3—C4—C5—C6 | −2.2 (3) | C11—C20—C25—C24 | 179.9 (2) |
| O4—C4—C5—C6 | 170.6 (2) | N2—C1—N1—C2 | −177.39 (19) |
| O3—C5—C6—C7 | 178.9 (2) | S1—C1—N1—C2 | 1.7 (2) |
| C4—C5—C6—C7 | 1.0 (4) | C7—C2—N1—C1 | 174.3 (2) |
| C5—C6—C7—C2 | 1.3 (4) | C3—C2—N1—C1 | −1.6 (2) |
| C5—C6—C7—O1 | 180.0 (2) | N3—C9—N2—C1 | −2.1 (3) |
| N1—C2—C7—C6 | −178.2 (2) | C10—C9—N2—C1 | 176.82 (17) |
| C3—C2—C7—C6 | −2.3 (3) | N1—C1—N2—C9 | −6.8 (3) |
| N1—C2—C7—O1 | 3.1 (3) | S1—C1—N2—C9 | 174.04 (14) |
| C3—C2—C7—O1 | 178.99 (18) | C12—C10—N4—C11 | −3.8 (3) |
| N2—C9—C10—N4 | −175.32 (17) | C9—C10—N4—C11 | 172.47 (16) |
| N3—C9—C10—N4 | 3.8 (2) | N5—C11—N4—C10 | −6.2 (3) |
| N2—C9—C10—C12 | 0.8 (3) | C20—C11—N4—C10 | 176.25 (17) |
| N3—C9—C10—C12 | 179.85 (18) | N4—C11—N5—N6 | 9.7 (3) |
| N4—C10—C12—N6 | 10.2 (3) | C20—C11—N5—N6 | −172.69 (19) |
| C9—C10—C12—N6 | −165.74 (19) | C10—C12—N6—N5 | −6.7 (3) |
| N4—C10—C12—C13 | −171.40 (19) | C13—C12—N6—N5 | 174.70 (19) |
| C9—C10—C12—C13 | 12.7 (3) | C11—N5—N6—C12 | −2.8 (3) |
| N6—C12—C13—C14 | 62.2 (3) | O2—C8—O1—C7 | −12.1 (4) |
| C10—C12—C13—C14 | −116.3 (2) | C19—C8—O1—C7 | 166.2 (2) |
| N6—C12—C13—C18 | −116.5 (2) | C6—C7—O1—C8 | 114.8 (2) |
| C10—C12—C13—C18 | 65.1 (3) | C2—C7—O1—C8 | −66.5 (3) |
| C18—C13—C14—C15 | −3.5 (4) | C4—C5—O3—C27 | −178.6 (2) |
| C12—C13—C14—C15 | 177.8 (2) | C6—C5—O3—C27 | 3.5 (4) |
| C13—C14—C15—C16 | 2.9 (5) | O5A—C28—O4—C4 | −37.2 (6) |
| C14—C15—C16—C17 | −0.3 (5) | O5—C28—O4—C4 | 22.3 (5) |
| C15—C16—C17—C18 | −1.5 (5) | C29—C28—O4—C4 | −176.2 (2) |
| C16—C17—C18—C13 | 0.8 (4) | C3—C4—O4—C28 | −84.3 (3) |
| C14—C13—C18—C17 | 1.7 (4) | C5—C4—O4—C28 | 102.9 (3) |
| C12—C13—C18—C17 | −179.6 (2) | C4—C3—S1—C1 | −175.9 (2) |
| N5—C11—C20—C25 | −0.7 (3) | C2—C3—S1—C1 | 0.18 (15) |
| N4—C11—C20—C25 | 177.1 (2) | N1—C1—S1—C3 | −1.14 (16) |
| N5—C11—C20—C21 | 178.8 (2) | N2—C1—S1—C3 | 178.10 (16) |
| D—H···A | D—H | H···A | D···A | D—H···A |
| N3—H3A···O2i | 0.87 (2) | 2.59 (2) | 3.229 (3) | 130.5 (18) |
| N3—H3A···N4 | 0.87 (2) | 2.23 (2) | 2.613 (2) | 106.8 (17) |
| N3—H3B···N1 | 0.93 (2) | 1.97 (2) | 2.676 (2) | 130.8 (19) |
| C17—H17···O5ii | 0.93 | 2.55 | 3.390 (5) | 150 |
| C21—H21···N4 | 0.93 | 2.52 | 2.830 (3) | 100 |
| C25—H25···N5 | 0.93 | 2.49 | 2.809 (3) | 100 |
| C26—H26B···O2iii | 0.96 | 2.58 | 3.390 (4) | 143 |
| C27—H27A···O3iv | 0.96 | 2.53 | 3.389 (4) | 150 |
| C27—H27B···O5Av | 0.96 | 2.29 | 3.194 (8) | 156 |
| Symmetry codes: (i) x, y+1, z; (ii) −x, y+1/2, −z+1/2; (iii) −x+1, −y+1, −z+1; (iv) −x, −y−2, −z+1; (v) −x, −y−1, −z+1. |
Acknowledgements
The study was carried out with the financial support of the Ministry of Science and Higher Education of the Russian Federation within the framework of the state assignment (subject No. state. reg. 124020200072–0). This work was also supported by the Azerbaijan State Pedagogical University, Azerbaijan Medical University. The authors' contributions are as follows. Conceptualization, MA and MMW; synthesis,YKS, DSK and VSG; X-ray analysis, YKS, DSK and VSG; writing (review and editing of the manuscript) NAE, MA, MMW and KIH; funding acquisition, YKS, DSK, VSG, NAE and KIH; supervision, MA and MMW.
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