Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536803008316/ac6036sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536803008316/ac60364sup2.hkl |
CCDC reference: 214641
Key indicators
- Single-crystal X-ray study
- T = 120 K
- Mean (C-C) = 0.004 Å
- R factor = 0.051
- wR factor = 0.131
- Data-to-parameter ratio = 10.0
checkCIF results
No syntax errors found ADDSYM reports no extra symmetry
Alert Level C:
STRVAL_01 From the CIF: _refine_ls_abs_structure_Flack -2.900 From the CIF: _refine_ls_abs_structure_Flack_su 1.600 Alert C Flack parameter is too small PLAT_710 Alert C Delete 1-2-3 or 2-3-4 (CIF) Linear Torsion Angle # 18 C7 -C8 -C9 -N2 3.00 0.00 1.555 1.555 1.555 1.555 General Notes
REFLT_03 From the CIF: _diffrn_reflns_theta_max 25.00 From the CIF: _reflns_number_total 1436 Count of symmetry unique reflns 733 Completeness (_total/calc) 195.91% TEST3: Check Friedels for noncentro structure Estimate of Friedel pairs measured 703 Fraction of Friedel pairs measured 0.959 Are heavy atom types Z>Si present no ALERT: MoKa measured Friedel data cannot be used to determine absolute structure in a light-atom study EXCEPT under VERY special conditions. It is preferred that Friedel data is merged in such cases.
0 Alert Level A = Potentially serious problem
0 Alert Level B = Potential problem
2 Alert Level C = Please check
The method of preparation included heating ortho-aminophenol and ethyl cyanoacetate at 453 K for 6 h. Without isolation of the intermediate, after cooling, 2,4-dihydroxybenzaldehyde, ammonium acetate and ethanol were added and the mixture was heated to reflux for 30 min. After cooling, the solid obtained was filtered and washed with water, ethanol and diethyl ether. Possibly the hydrolysis of the benzoxazol-2-ylacetonitrile, (2), produced the title compound (Luan et al., 2002; Elnagdi et al., 1997).
H atoms were located by difference Fourier syntesis, the positional parameters have been refined with Uiso set to 1.5 (for methyl H atoms) or 1.2 (for the remaining H atoms) times the value of Ueq of the atom to which they are attached.
Data collection: COLLECT (Nonius BV, 1997-2000); cell refinement: HKL SCALEPACK (Otwinowski & Minor 1997); data reduction: HKL DENZO and SCALEPACK (Otwinowski & Minor 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and Mercury (CCDC, 2003); software used to prepare material for publication: WinGX (Farrugia, 1999).
C9H8N2O2 | F(000) = 368 |
Mr = 176.17 | Dx = 1.413 Mg m−3 |
Monoclinic, Cc | Mo Kα radiation, λ = 0.71073 Å |
a = 5.6672 (3) Å | Cell parameters from 8167 reflections |
b = 18.0609 (11) Å | θ = 1.0–27.5° |
c = 8.1949 (5) Å | µ = 0.10 mm−1 |
β = 99.135 (3)° | T = 120 K |
V = 828.15 (8) Å3 | Prism, yellow |
Z = 4 | 0.12 × 0.06 × 0.06 mm |
Nonius KappaCCD diffractometer | Rint = 0.096 |
CCD rotation images, thick slices scans | θmax = 25°, θmin = 2.3° |
2565 measured reflections | h = −6→6 |
1436 independent reflections | k = −20→21 |
1301 reflections with I > 2σ(I) | l = −9→9 |
Refinement on F2 | w = 1/[σ2(Fo2) + (0.0677P)2] where P = (Fo2 + 2Fc2)/3 |
Least-squares matrix: full | (Δ/σ)max = 0.004 |
R[F2 > 2σ(F2)] = 0.051 | Δρmax = 0.23 e Å−3 |
wR(F2) = 0.131 | Δρmin = −0.19 e Å−3 |
S = 1.06 | Extinction correction: SHELXL97, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
1436 reflections | Extinction coefficient: 0.14 (2) |
143 parameters | Absolute structure: Flack (1983) |
2 restraints | Absolute structure parameter: −2.9 (16) |
H atoms treated by a mixture of independent and constrained refinement |
C9H8N2O2 | V = 828.15 (8) Å3 |
Mr = 176.17 | Z = 4 |
Monoclinic, Cc | Mo Kα radiation |
a = 5.6672 (3) Å | µ = 0.10 mm−1 |
b = 18.0609 (11) Å | T = 120 K |
c = 8.1949 (5) Å | 0.12 × 0.06 × 0.06 mm |
β = 99.135 (3)° |
Nonius KappaCCD diffractometer | 1301 reflections with I > 2σ(I) |
2565 measured reflections | Rint = 0.096 |
1436 independent reflections |
R[F2 > 2σ(F2)] = 0.051 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.131 | Δρmax = 0.23 e Å−3 |
S = 1.06 | Δρmin = −0.19 e Å−3 |
1436 reflections | Absolute structure: Flack (1983) |
143 parameters | Absolute structure parameter: −2.9 (16) |
2 restraints |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
O1 | 1.5419 (3) | 0.66992 (11) | 1.0278 (3) | 0.0452 (6) | |
O2 | 0.7768 (3) | 0.71253 (10) | 0.6798 (2) | 0.0411 (5) | |
N1 | 1.1093 (4) | 0.70133 (13) | 0.8761 (3) | 0.0368 (6) | |
N2 | 0.4490 (5) | 0.86111 (15) | 0.7505 (3) | 0.0491 (7) | |
C1 | 1.2195 (4) | 0.63753 (16) | 0.8222 (3) | 0.0364 (6) | |
C2 | 1.1167 (5) | 0.59047 (16) | 0.6956 (3) | 0.0392 (7) | |
C3 | 1.2436 (6) | 0.52986 (17) | 0.6520 (4) | 0.0440 (7) | |
C4 | 1.4707 (6) | 0.51492 (17) | 0.7357 (4) | 0.0437 (7) | |
C5 | 1.5747 (4) | 0.56132 (17) | 0.8617 (3) | 0.0412 (7) | |
C6 | 1.4499 (4) | 0.62188 (15) | 0.9051 (3) | 0.0370 (6) | |
C7 | 0.9075 (4) | 0.73486 (14) | 0.8029 (3) | 0.0347 (6) | |
C8 | 0.8534 (5) | 0.80604 (16) | 0.8918 (4) | 0.0402 (7) | |
C9 | 0.6276 (5) | 0.83698 (17) | 0.8142 (3) | 0.0409 (7) | |
H1 | 1.678 (7) | 0.652 (2) | 1.088 (5) | 0.061* | |
H | 1.189 (6) | 0.7213 (19) | 0.965 (5) | 0.049* | |
H2 | 0.962 (6) | 0.601 (2) | 0.634 (5) | 0.049* | |
H3 | 1.174 (6) | 0.497 (2) | 0.563 (5) | 0.049* | |
H4 | 1.557 (6) | 0.4738 (19) | 0.709 (5) | 0.049* | |
H5 | 1.755 (6) | 0.553 (2) | 0.919 (4) | 0.049* | |
H81 | 0.841 (6) | 0.7933 (18) | 1.006 (5) | 0.049* | |
H82 | 0.975 (6) | 0.844 (2) | 0.900 (4) | 0.049* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0354 (10) | 0.0493 (12) | 0.0468 (11) | 0.0038 (9) | −0.0059 (8) | −0.0061 (9) |
O2 | 0.0413 (11) | 0.0397 (10) | 0.0390 (10) | −0.0013 (8) | −0.0041 (8) | 0.0008 (8) |
N1 | 0.0324 (12) | 0.0395 (12) | 0.0357 (12) | 0.0032 (9) | −0.0033 (9) | −0.0026 (10) |
N2 | 0.0414 (13) | 0.0482 (14) | 0.0527 (14) | 0.0039 (11) | −0.0076 (11) | −0.0031 (11) |
C1 | 0.0340 (13) | 0.0366 (14) | 0.0381 (14) | 0.0000 (10) | 0.0046 (10) | 0.0029 (11) |
C2 | 0.0350 (14) | 0.0427 (17) | 0.0386 (14) | −0.0025 (11) | 0.0019 (11) | −0.0014 (11) |
C3 | 0.0462 (16) | 0.0404 (15) | 0.0442 (15) | −0.0007 (12) | 0.0036 (12) | −0.0034 (12) |
C4 | 0.0484 (16) | 0.0397 (15) | 0.0438 (16) | 0.0044 (13) | 0.0095 (12) | 0.0012 (11) |
C5 | 0.0357 (14) | 0.0441 (15) | 0.0432 (14) | 0.0052 (12) | 0.0045 (11) | 0.0015 (12) |
C6 | 0.0348 (14) | 0.0396 (15) | 0.0356 (14) | −0.0050 (11) | 0.0024 (11) | 0.0009 (11) |
C7 | 0.0333 (13) | 0.0360 (14) | 0.0327 (12) | −0.0020 (10) | −0.0011 (10) | 0.0045 (11) |
C8 | 0.0377 (14) | 0.0391 (15) | 0.0407 (16) | 0.0036 (12) | −0.0030 (11) | 0.0006 (12) |
C9 | 0.0415 (14) | 0.0390 (15) | 0.0399 (14) | −0.0025 (12) | −0.0006 (11) | −0.0021 (11) |
O1—C6 | 1.367 (3) | C2—C3 | 1.387 (4) |
O2—C7 | 1.222 (3) | C3—C4 | 1.386 (5) |
N1—C7 | 1.348 (3) | C4—C5 | 1.387 (4) |
N1—C1 | 1.414 (4) | C5—C6 | 1.379 (4) |
N2—C9 | 1.148 (4) | C7—C8 | 1.532 (4) |
C1—C2 | 1.395 (4) | C8—C9 | 1.448 (4) |
C1—C6 | 1.402 (4) | ||
C7—N1—C1 | 127.8 (2) | O1—C6—C5 | 122.8 (2) |
C2—C1—C6 | 119.0 (2) | O1—C6—C1 | 116.5 (2) |
C2—C1—N1 | 125.1 (2) | C5—C6—C1 | 120.8 (2) |
C6—C1—N1 | 115.9 (2) | O2—C7—N1 | 125.4 (2) |
C3—C2—C1 | 120.0 (3) | O2—C7—C8 | 121.9 (2) |
C4—C3—C2 | 120.3 (3) | N1—C7—C8 | 112.7 (2) |
C3—C4—C5 | 120.2 (3) | C9—C8—C7 | 110.2 (2) |
C6—C5—C4 | 119.8 (2) | N2—C9—C8 | 179.0 (3) |
C7—N1—C1—C2 | −11.0 (4) | C2—C1—C6—O1 | 179.9 (2) |
C7—N1—C1—C6 | 169.1 (2) | N1—C1—C6—O1 | −0.2 (3) |
C6—C1—C2—C3 | −0.9 (4) | C2—C1—C6—C5 | 0.5 (4) |
N1—C1—C2—C3 | 179.2 (3) | N1—C1—C6—C5 | −179.5 (2) |
C1—C2—C3—C4 | 1.2 (4) | C1—N1—C7—O2 | 4.4 (4) |
C2—C3—C4—C5 | −1.2 (5) | C1—N1—C7—C8 | −175.9 (2) |
C3—C4—C5—C6 | 0.9 (4) | O2—C7—C8—C9 | 3.3 (4) |
C4—C5—C6—O1 | −179.8 (3) | N1—C7—C8—C9 | −176.4 (2) |
C4—C5—C6—C1 | −0.6 (4) | C7—C8—C9—N2 | −3E1 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H···O1 | 0.87 (4) | 2.17 (4) | 2.629 (4) | 111 (3) |
N1—H···O2i | 0.87 (4) | 2.08 (4) | 2.961 (4) | 162 (3) |
O1—H1···N2ii | 0.90 (4) | 1.88 (4) | 2.762 (4) | 164 (4) |
Symmetry codes: (i) x+1/2, −y+3/2, z+1/2; (ii) x+3/2, −y+3/2, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C9H8N2O2 |
Mr | 176.17 |
Crystal system, space group | Monoclinic, Cc |
Temperature (K) | 120 |
a, b, c (Å) | 5.6672 (3), 18.0609 (11), 8.1949 (5) |
β (°) | 99.135 (3) |
V (Å3) | 828.15 (8) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.12 × 0.06 × 0.06 |
Data collection | |
Diffractometer | Nonius KappaCCD diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 2565, 1436, 1301 |
Rint | 0.096 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.051, 0.131, 1.06 |
No. of reflections | 1436 |
No. of parameters | 143 |
No. of restraints | 2 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.23, −0.19 |
Absolute structure | Flack (1983) |
Absolute structure parameter | −2.9 (16) |
Computer programs: COLLECT (Nonius BV, 1997-2000), HKL SCALEPACK (Otwinowski & Minor 1997), HKL DENZO and SCALEPACK (Otwinowski & Minor 1997), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), ORTEP-3 for Windows (Farrugia, 1997) and Mercury (CCDC, 2003), WinGX (Farrugia, 1999).
O1—C6 | 1.367 (3) | N1—C1 | 1.414 (4) |
O2—C7 | 1.222 (3) | N2—C9 | 1.148 (4) |
N1—C7 | 1.348 (3) | ||
C7—N1—C1 | 127.8 (2) | O1—C6—C1 | 116.5 (2) |
C2—C1—N1 | 125.1 (2) | O2—C7—N1 | 125.4 (2) |
C6—C1—N1 | 115.9 (2) | N1—C7—C8 | 112.7 (2) |
O1—C6—C5 | 122.8 (2) | N2—C9—C8 | 179.0 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H···O1 | 0.87 (4) | 2.17 (4) | 2.629 (4) | 111 (3) |
N1—H···O2i | 0.87 (4) | 2.08 (4) | 2.961 (4) | 162 (3) |
O1—H1···N2ii | 0.90 (4) | 1.88 (4) | 2.762 (4) | 164 (4) |
Symmetry codes: (i) x+1/2, −y+3/2, z+1/2; (ii) x+3/2, −y+3/2, z+1/2. |
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Coumarins are a family of compounds that have been studied extensively due to its practical applications. Optical brightness, laser dyes, sensitizes in phototerapy, etc., is some of the usefulness of this class of compounds (Machado & Miranda, 2001).
The title compound, (4), was obtained during the synthesis of the 3-substituted 7-hydroxycoumarins, (3), from 2,4-dihydroxybenzaldeyde, (1), and benzoxazol-2-ylacetonitrile, (2), as outlined in the Scheme. Possibly, the final mixture contained some of the unreacted precursor (2), this being hydrolyzed during the second step of the reaction or during work-up (Luan et al., 2002; Elnagdi et al., 1997). An ORTEP-3 (Farrugia, 1997) drawing of (4) is shown in Fig. 1, and selected geometric parameters presented in Table 1. The 2-hydroxyphenyl and 2-cyanoacetamide moieties are planar and the angle between these systems is 7.48 (18)°.
In the crystal structure, the molecule is linked by two kinds of hydrogen bonds, viz. a two-center and a three-center bonding (Table 2). The two-center hydrogen bond O1—H1···N2 links the molecules in an infinite zigzag in the [301] direction (Fig. 2a). The three-center hydrogen bond involves the intramolecular interaction N1—H···O1 and the intermolecular interaction N1—H···O2 that produces an infinite zigzag the [101] direction (Fig. 2 b). The H atom is in the plane formed by atoms N1, O1 and O2 that indicate the presence of the three-center hydrogen bond (Jeffrey & Maluszynska, 1982). The N1···O1 distance of 2.627 (3) Å is clearly indicative of strong intramolecular hydrogen bonding; this distance is significantly shorter than the sum of the van der Waals radii for oxygen and nitrogen (3.07 Å; Bondi, 1964). This intramolecular N1···O1 distance is comparable to those observed for 2-[(2-iodophenyl)iminomethyl]phenol [2.624 (5) Å], N,N'-bis(p-chlorosalicylideneamine)-1,2-diaminobenzene [2.615 (6) Å] and 2,2'-azinodimethyldiphenol [2.611 (6) Å] (Elmali & Elerman, 1997; Xu et al., 1994; Elerman et al., 1994).