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The six-membered phosphorinane ring in (1,4,7,10,13,16-hexaoxacyclooctadecane)potassium 2-O-benzoyl-1,3,5-O-methylidyne-myo-inositol 4,6-cyclophosphate trihydrate, [K(C12H24O6)](C14H12O9P)·3H2O, has a boat rather than a chair conformation. The K+ ion is eight-coordinate and is connected to one of the phosphate O atoms, one of the O atoms of the myo-inositol residue and the six O atoms of the crown ether.
Supporting information
CCDC reference: 174798
The crude phosphate (0.070 g, 0.20 mmol), prepared by adding PCl3 to
2-O-benzoyl-myo-inositol 1,3,5-orthoformate (Ozaki et al., 1994)
followed by oxidation and hydrolysis (I2/ water), was added to a mixture of
18-crown-6 (0.061 g, 0.23 mmol) and KF (0.022 g, 0.38 mmol)in tetrahydrofuran
(5 ml). The mixture was refluxed for 2 h, stirred overnight, then filtered to
remove undissolved KF and left to crystallize. Needle-shaped crystals of (I)
were obtained. M.p. 377–379 K. 1H NMR (CDCl3, p.p.m.): γ 2.40 (br
s, ca 6H, H2O), 3.65 (s, 24H, CH2 of 18-crown-6), 4.55–4.58 (m,
2H, CH), 4.85–4.91 (m, 2H, CH), 5.50–5.55 (m, 2H, CH), 5.81–5.83 (m, 1H,
CH), 7.35–7.65 (m, 3H, Ar—H), 8.11–8.60 (m, 2H, Ar—H). 31P NMR: -11.1.
H atoms were placed geometrically and refined using a riding model with C—H
constrained to 0.93–0.98 Å and Uiso(H) = 1.2Ueq(C). The
water O16A, O16B, O17A, O17B, O18A and O18B atoms were refined isotropically
and H atoms on these O atoms are not included in the refinement. There are
three positionally disordered lattice water molecules; the O atoms of each of
these were assigned two positions and refined isotropically using free
variable restraints with total occupancy for each pair of disordered O-atom
positions set to unity. H atoms on these O atoms could not be located and so
were not included in the refinement model.
Data collection: CAD-4 Software (Enraf-Nonius, 1989); cell refinement: CAD-4 Software; data reduction: SDP (Frenz, 1985); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEX (McArdle, 1995); software used to prepare material for publication: SHELXL97.
2-benzoyl-1,3,5-
O-methylidyneinositol 4,6-cyclophosphate, potassium-
18-crown-6 salt
top
Crystal data top
[K(C12H24O6)](C14H12O9P)·3H2O | F(000) = 1504 |
Mr = 712.67 | Dx = 1.416 Mg m−3 |
Monoclinic, P21/c | Melting point: 377–379K K |
Hall symbol: -P_2ybc | Mo Kα radiation, λ = 0.71073 Å |
a = 17.146 (2) Å | Cell parameters from 25 reflections |
b = 10.9380 (16) Å | θ = 9.5–12.0° |
c = 18.965 (9) Å | µ = 0.28 mm−1 |
β = 109.96 (2)° | T = 293 K |
V = 3343.1 (18) Å3 | Block cut from needle, colourless |
Z = 4 | 0.30 × 0.30 × 0.20 mm |
Data collection top
Enraf-Nonius MACH3 diffractometer | Rint = 0.0 |
Radiation source: fine-focus sealed tube | θmax = 25.0°, θmin = 2.2° |
Graphite monochromator | h = 0→20 |
Profile data from ω scans | k = 0→12 |
5867 measured reflections | l = −22→21 |
5867 independent reflections | 3 standard reflections every 90 min |
2662 reflections with I > 2σ(I) | intensity decay: none |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.059 | See text |
wR(F2) = 0.198 | w 1/[σ2(Fo2) + (0.075P)2 + 3.92P] where P = (Fo2 + 2Fc2)/3 |
S = 1.04 | (Δ/σ)max = 0.001 |
5867 reflections | Δρmax = 0.53 e Å−3 |
416 parameters | Δρmin = −0.31 e Å−3 |
0 restraints | Extinction correction: SHELXL97, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0019 (5) |
Crystal data top
[K(C12H24O6)](C14H12O9P)·3H2O | V = 3343.1 (18) Å3 |
Mr = 712.67 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 17.146 (2) Å | µ = 0.28 mm−1 |
b = 10.9380 (16) Å | T = 293 K |
c = 18.965 (9) Å | 0.30 × 0.30 × 0.20 mm |
β = 109.96 (2)° | |
Data collection top
Enraf-Nonius MACH3 diffractometer | Rint = 0.0 |
5867 measured reflections | 3 standard reflections every 90 min |
5867 independent reflections | intensity decay: none |
2662 reflections with I > 2σ(I) | |
Refinement top
R[F2 > 2σ(F2)] = 0.059 | 0 restraints |
wR(F2) = 0.198 | See text |
S = 1.04 | Δρmax = 0.53 e Å−3 |
5867 reflections | Δρmin = −0.31 e Å−3 |
416 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | Occ. (<1) |
K | 0.70547 (7) | 0.02638 (10) | 0.25207 (6) | 0.0579 (3) | |
P | 0.67571 (10) | 0.68220 (12) | 0.19374 (8) | 0.0606 (4) | |
O1 | 0.6559 (2) | 0.5538 (3) | 0.22529 (17) | 0.0551 (8) | |
O2 | 0.7699 (2) | 0.2671 (3) | 0.23963 (16) | 0.0535 (8) | |
O3 | 0.8805 (2) | 0.4057 (3) | 0.36145 (15) | 0.0530 (8) | |
O4 | 0.8761 (2) | 0.3669 (3) | 0.21442 (17) | 0.0556 (8) | |
O5 | 0.7703 (2) | 0.6600 (3) | 0.19574 (17) | 0.0581 (9) | |
O6 | 0.7481 (2) | 0.3467 (3) | 0.12242 (16) | 0.0582 (9) | |
O7 | 0.6800 (3) | 0.7761 (3) | 0.2505 (2) | 0.0800 (12) | |
O8 | 0.6195 (3) | 0.6983 (4) | 0.1157 (2) | 0.0860 (12) | |
O9 | 0.8043 (2) | 0.4444 (3) | 0.43470 (17) | 0.0620 (9) | |
O10 | 0.8786 (2) | 0.0008 (3) | 0.31345 (19) | 0.0620 (9) | |
O11 | 0.8105 (2) | 0.0033 (3) | 0.15589 (19) | 0.0645 (10) | |
O12 | 0.6388 (3) | 0.0435 (4) | 0.0945 (2) | 0.0780 (11) | |
O13 | 0.5589 (2) | 0.1627 (4) | 0.1829 (2) | 0.0822 (12) | |
O14 | 0.6233 (3) | 0.1467 (4) | 0.3384 (2) | 0.0878 (13) | |
O15 | 0.7952 (2) | 0.1242 (3) | 0.40056 (17) | 0.0691 (10) | |
C1 | 0.6788 (3) | 0.4403 (4) | 0.1996 (2) | 0.0469 (11) | |
H1 | 0.6299 | 0.3878 | 0.1795 | 0.056* | |
C2 | 0.7429 (3) | 0.3780 (4) | 0.2656 (2) | 0.0485 (12) | |
H2 | 0.7181 | 0.3581 | 0.3038 | 0.058* | |
C3 | 0.8163 (3) | 0.4610 (4) | 0.2989 (2) | 0.0451 (11) | |
H3 | 0.7985 | 0.5389 | 0.3141 | 0.054* | |
C4 | 0.8549 (3) | 0.4819 (4) | 0.2394 (3) | 0.0518 (12) | |
H4 | 0.9047 | 0.5327 | 0.2595 | 0.062* | |
C5 | 0.7918 (3) | 0.5455 (4) | 0.1713 (2) | 0.0480 (11) | |
H5 | 0.8173 | 0.5600 | 0.1330 | 0.058* | |
C6 | 0.7190 (3) | 0.4605 (4) | 0.1401 (2) | 0.0494 (11) | |
H6 | 0.6786 | 0.4960 | 0.0950 | 0.059* | |
C7 | 0.8054 (3) | 0.2937 (4) | 0.1852 (3) | 0.0552 (13) | |
H7 | 0.8229 | 0.2161 | 0.1695 | 0.066* | |
C8 | 0.8672 (3) | 0.4064 (4) | 0.4279 (2) | 0.0527 (12) | |
C9 | 0.9400 (3) | 0.3561 (4) | 0.4890 (2) | 0.0519 (12) | |
C10 | 0.9307 (4) | 0.3362 (5) | 0.5578 (3) | 0.0616 (14) | |
H10 | 0.8804 | 0.3528 | 0.5644 | 0.074* | |
C11 | 0.9968 (4) | 0.2916 (5) | 0.6161 (3) | 0.0686 (15) | |
H11 | 0.9904 | 0.2759 | 0.6620 | 0.082* | |
C12 | 1.0715 (4) | 0.2701 (5) | 0.6078 (3) | 0.0695 (15) | |
H12 | 1.1160 | 0.2418 | 0.6481 | 0.083* | |
C13 | 1.0806 (3) | 0.2904 (5) | 0.5391 (3) | 0.0662 (14) | |
H13 | 1.1313 | 0.2752 | 0.5330 | 0.079* | |
C14 | 1.0145 (3) | 0.3334 (4) | 0.4795 (3) | 0.0593 (13) | |
H14 | 1.0204 | 0.3469 | 0.4332 | 0.071* | |
C15 | 0.9275 (3) | −0.0028 (5) | 0.2667 (3) | 0.0717 (16) | |
H15A | 0.9791 | −0.0456 | 0.2919 | 0.086* | |
H15B | 0.9408 | 0.0797 | 0.2558 | 0.086* | |
C16 | 0.8807 (4) | −0.0665 (5) | 0.1960 (3) | 0.0734 (17) | |
H16A | 0.9159 | −0.0775 | 0.1659 | 0.088* | |
H16B | 0.8635 | −0.1465 | 0.2072 | 0.088* | |
C17 | 0.7597 (4) | −0.0517 (5) | 0.0883 (3) | 0.0738 (17) | |
H17A | 0.7380 | −0.1288 | 0.0989 | 0.089* | |
H17B | 0.7917 | −0.0676 | 0.0559 | 0.089* | |
C18 | 0.6919 (4) | 0.0315 (6) | 0.0517 (3) | 0.0746 (17) | |
H18A | 0.7141 | 0.1110 | 0.0460 | 0.090* | |
H18B | 0.6606 | 0.0008 | 0.0022 | 0.090* | |
C19 | 0.5731 (4) | 0.1283 (7) | 0.0646 (3) | 0.0847 (18) | |
H19A | 0.5430 | 0.1094 | 0.0123 | 0.102* | |
H19B | 0.5952 | 0.2105 | 0.0674 | 0.102* | |
C20 | 0.5164 (4) | 0.1203 (7) | 0.1088 (3) | 0.093 (2) | |
H20A | 0.4674 | 0.1699 | 0.0855 | 0.112* | |
H20B | 0.4988 | 0.0363 | 0.1103 | 0.112* | |
C21 | 0.5072 (4) | 0.1644 (8) | 0.2271 (4) | 0.112 (3) | |
H21A | 0.4907 | 0.0817 | 0.2341 | 0.134* | |
H21B | 0.4575 | 0.2114 | 0.2020 | 0.134* | |
C22 | 0.5529 (4) | 0.2198 (8) | 0.3005 (4) | 0.105 (2) | |
H22A | 0.5705 | 0.3017 | 0.2933 | 0.126* | |
H22B | 0.5170 | 0.2254 | 0.3303 | 0.126* | |
C23 | 0.6693 (4) | 0.1913 (7) | 0.4113 (3) | 0.097 (2) | |
H23A | 0.6352 | 0.1889 | 0.4429 | 0.116* | |
H23B | 0.6857 | 0.2754 | 0.4080 | 0.116* | |
C24 | 0.7436 (4) | 0.1149 (6) | 0.4443 (3) | 0.087 (2) | |
H24A | 0.7735 | 0.1418 | 0.4952 | 0.104* | |
H24B | 0.7273 | 0.0304 | 0.4463 | 0.104* | |
C25 | 0.8683 (4) | 0.0549 (6) | 0.4308 (3) | 0.0811 (18) | |
H25A | 0.8543 | −0.0300 | 0.4352 | 0.097* | |
H25B | 0.8999 | 0.0848 | 0.4806 | 0.097* | |
C26 | 0.9187 (4) | 0.0647 (5) | 0.3816 (3) | 0.0762 (16) | |
H26A | 0.9255 | 0.1500 | 0.3710 | 0.091* | |
H26B | 0.9733 | 0.0300 | 0.4066 | 0.091* | |
O16A | 0.2743 (8) | 0.3018 (15) | 0.1048 (7) | 0.161 (7)* | 0.491 (13) |
O16B | 0.2908 (5) | 0.1835 (8) | 0.1004 (4) | 0.087 (4)* | 0.509 (13) |
O17A | 0.3739 (8) | 0.3504 (9) | 0.0200 (5) | 0.121 (5)* | 0.582 (18) |
O17B | 0.3101 (11) | 0.3334 (12) | 0.0010 (7) | 0.113 (6)* | 0.418 (18) |
O18A | 0.5105 (9) | 0.0607 (13) | 0.4710 (8) | 0.202 (7)* | 0.579 (13) |
O18B | 0.5220 (12) | −0.0380 (17) | 0.4008 (10) | 0.184 (9)* | 0.421 (13) |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
K | 0.0691 (8) | 0.0560 (7) | 0.0579 (6) | −0.0058 (6) | 0.0337 (6) | −0.0056 (5) |
P | 0.0765 (10) | 0.0481 (8) | 0.0661 (9) | 0.0036 (7) | 0.0359 (8) | 0.0037 (7) |
O1 | 0.067 (2) | 0.0489 (19) | 0.0607 (19) | 0.0010 (17) | 0.0359 (18) | 0.0007 (16) |
O2 | 0.076 (2) | 0.0430 (18) | 0.0490 (17) | −0.0028 (17) | 0.0311 (17) | 0.0021 (15) |
O3 | 0.062 (2) | 0.064 (2) | 0.0368 (16) | 0.0017 (17) | 0.0219 (16) | −0.0018 (15) |
O4 | 0.067 (2) | 0.054 (2) | 0.0586 (19) | 0.0022 (18) | 0.0374 (18) | −0.0034 (16) |
O5 | 0.076 (2) | 0.0408 (18) | 0.068 (2) | −0.0023 (17) | 0.0390 (19) | 0.0016 (16) |
O6 | 0.084 (2) | 0.053 (2) | 0.0423 (17) | 0.0060 (18) | 0.0273 (18) | −0.0065 (15) |
O7 | 0.116 (3) | 0.046 (2) | 0.097 (3) | −0.001 (2) | 0.061 (3) | −0.011 (2) |
O8 | 0.097 (3) | 0.086 (3) | 0.071 (2) | 0.022 (2) | 0.024 (2) | 0.021 (2) |
O9 | 0.068 (2) | 0.076 (2) | 0.0504 (19) | 0.008 (2) | 0.0305 (18) | −0.0025 (17) |
O10 | 0.067 (2) | 0.057 (2) | 0.067 (2) | −0.0028 (18) | 0.0295 (19) | −0.0010 (17) |
O11 | 0.092 (3) | 0.052 (2) | 0.059 (2) | 0.003 (2) | 0.039 (2) | −0.0021 (17) |
O12 | 0.103 (3) | 0.082 (3) | 0.058 (2) | −0.007 (3) | 0.040 (2) | 0.003 (2) |
O13 | 0.058 (2) | 0.120 (3) | 0.074 (2) | −0.011 (2) | 0.030 (2) | −0.019 (2) |
O14 | 0.083 (3) | 0.120 (4) | 0.076 (3) | −0.012 (3) | 0.047 (2) | −0.026 (3) |
O15 | 0.089 (3) | 0.079 (3) | 0.0469 (19) | −0.001 (2) | 0.032 (2) | 0.0079 (18) |
C1 | 0.051 (3) | 0.047 (3) | 0.048 (2) | −0.012 (2) | 0.023 (2) | −0.007 (2) |
C2 | 0.068 (3) | 0.042 (3) | 0.049 (3) | −0.001 (2) | 0.038 (3) | 0.002 (2) |
C3 | 0.050 (3) | 0.048 (3) | 0.041 (2) | 0.002 (2) | 0.021 (2) | 0.002 (2) |
C4 | 0.067 (3) | 0.045 (3) | 0.057 (3) | −0.006 (2) | 0.037 (3) | −0.004 (2) |
C5 | 0.066 (3) | 0.040 (3) | 0.047 (3) | −0.003 (2) | 0.032 (2) | 0.005 (2) |
C6 | 0.065 (3) | 0.048 (3) | 0.040 (2) | −0.003 (2) | 0.023 (2) | 0.000 (2) |
C7 | 0.079 (4) | 0.044 (3) | 0.051 (3) | 0.002 (3) | 0.034 (3) | −0.004 (2) |
C8 | 0.069 (3) | 0.050 (3) | 0.043 (3) | −0.009 (3) | 0.025 (3) | −0.010 (2) |
C9 | 0.069 (3) | 0.044 (3) | 0.043 (2) | −0.010 (2) | 0.019 (2) | −0.001 (2) |
C10 | 0.081 (4) | 0.062 (3) | 0.049 (3) | 0.007 (3) | 0.030 (3) | −0.002 (2) |
C11 | 0.093 (4) | 0.062 (3) | 0.048 (3) | 0.005 (3) | 0.020 (3) | 0.006 (3) |
C12 | 0.088 (4) | 0.050 (3) | 0.058 (3) | −0.003 (3) | 0.010 (3) | 0.004 (3) |
C13 | 0.061 (3) | 0.055 (3) | 0.078 (4) | −0.009 (3) | 0.017 (3) | −0.006 (3) |
C14 | 0.068 (4) | 0.057 (3) | 0.052 (3) | −0.011 (3) | 0.019 (3) | 0.002 (2) |
C15 | 0.070 (4) | 0.065 (4) | 0.094 (4) | 0.014 (3) | 0.048 (3) | 0.011 (3) |
C16 | 0.099 (5) | 0.058 (3) | 0.087 (4) | 0.006 (3) | 0.063 (4) | 0.005 (3) |
C17 | 0.114 (5) | 0.060 (3) | 0.061 (3) | −0.018 (4) | 0.048 (4) | −0.014 (3) |
C18 | 0.095 (4) | 0.087 (4) | 0.047 (3) | −0.021 (4) | 0.031 (3) | −0.008 (3) |
C19 | 0.094 (5) | 0.100 (5) | 0.050 (3) | −0.016 (4) | 0.012 (3) | −0.004 (3) |
C20 | 0.065 (4) | 0.123 (6) | 0.082 (4) | −0.015 (4) | 0.012 (3) | −0.019 (4) |
C21 | 0.063 (4) | 0.163 (7) | 0.123 (6) | −0.013 (5) | 0.050 (4) | −0.027 (6) |
C22 | 0.076 (5) | 0.154 (7) | 0.105 (5) | −0.009 (5) | 0.057 (4) | −0.039 (5) |
C23 | 0.119 (6) | 0.128 (6) | 0.069 (4) | −0.037 (5) | 0.067 (4) | −0.038 (4) |
C24 | 0.121 (6) | 0.102 (5) | 0.054 (3) | −0.027 (4) | 0.051 (4) | −0.004 (3) |
C25 | 0.115 (5) | 0.068 (4) | 0.052 (3) | 0.001 (4) | 0.019 (4) | 0.004 (3) |
C26 | 0.073 (4) | 0.072 (4) | 0.072 (4) | −0.001 (3) | 0.009 (3) | −0.012 (3) |
Geometric parameters (Å, º) top
K—O2 | 2.896 (3) | C6—H6 | 0.9800 |
K—O7i | 2.771 (4) | C7—H7 | 0.9800 |
K—O10 | 2.808 (4) | C8—C9 | 1.489 (7) |
K—O11 | 2.979 (3) | C9—C14 | 1.372 (7) |
K—O12 | 2.818 (4) | C9—C10 | 1.384 (6) |
K—O13 | 2.830 (4) | C10—C11 | 1.374 (7) |
K—O14 | 2.823 (4) | C10—H10 | 0.9300 |
K—O15 | 2.913 (4) | C11—C12 | 1.364 (8) |
P—O1 | 1.608 (3) | C11—H11 | 0.9300 |
P—O5 | 1.627 (3) | C12—C13 | 1.383 (7) |
P—O7 | 1.472 (4) | C12—H12 | 0.9300 |
P—O8 | 1.476 (4) | C13—C14 | 1.382 (7) |
O1—C1 | 1.437 (5) | C13—H13 | 0.9300 |
O2—C7 | 1.395 (5) | C14—H14 | 0.9300 |
O2—C2 | 1.444 (5) | C15—C16 | 1.480 (8) |
O3—C8 | 1.355 (5) | C15—H15A | 0.9700 |
O3—C3 | 1.447 (5) | C15—H15B | 0.9700 |
O4—C7 | 1.401 (6) | C16—H16A | 0.9700 |
O4—C4 | 1.434 (5) | C16—H16B | 0.9700 |
O5—C5 | 1.427 (5) | C17—C18 | 1.452 (8) |
O6—C7 | 1.386 (6) | C17—H17A | 0.9700 |
O6—C6 | 1.423 (5) | C17—H17B | 0.9700 |
O7—Kii | 2.771 (4) | C18—H18A | 0.9700 |
O9—C8 | 1.203 (5) | C18—H18B | 0.9700 |
O10—C15 | 1.415 (5) | C19—C20 | 1.488 (8) |
O10—C26 | 1.423 (6) | C19—H19A | 0.9700 |
O11—C16 | 1.409 (6) | C19—H19B | 0.9700 |
O11—C17 | 1.415 (6) | C20—H20A | 0.9700 |
O12—C18 | 1.418 (6) | C20—H20B | 0.9700 |
O12—C19 | 1.419 (7) | C21—C22 | 1.474 (9) |
O13—C21 | 1.412 (6) | C21—H21A | 0.9700 |
O13—C20 | 1.422 (6) | C21—H21B | 0.9700 |
O14—C22 | 1.422 (8) | C22—H22A | 0.9700 |
O14—C23 | 1.424 (7) | C22—H22B | 0.9700 |
O15—C24 | 1.409 (6) | C23—C24 | 1.472 (9) |
O15—C25 | 1.409 (7) | C23—H23A | 0.9700 |
C1—C2 | 1.517 (6) | C23—H23B | 0.9700 |
C1—C6 | 1.525 (5) | C24—H24A | 0.9700 |
C1—H1 | 0.9800 | C24—H24B | 0.9700 |
C2—C3 | 1.505 (6) | C25—C26 | 1.477 (8) |
C2—H2 | 0.9800 | C25—H25A | 0.9700 |
C3—C4 | 1.509 (5) | C25—H25B | 0.9700 |
C3—H3 | 0.9800 | C26—H26A | 0.9700 |
C4—C5 | 1.540 (7) | C26—H26B | 0.9700 |
C4—H4 | 0.9800 | O16A—O16B | 1.334 (15) |
C5—C6 | 1.506 (6) | O17A—O17B | 1.045 (13) |
C5—H5 | 0.9800 | O18A—O18B | 1.78 (2) |
| | | |
O7i—K—O10 | 92.66 (12) | O6—C7—O4 | 111.3 (4) |
O7i—K—O12 | 92.81 (12) | O2—C7—O4 | 111.3 (4) |
O10—K—O12 | 115.80 (11) | O6—C7—H7 | 107.5 |
O7i—K—O14 | 111.02 (12) | O2—C7—H7 | 107.5 |
O10—K—O14 | 118.17 (12) | O4—C7—H7 | 107.5 |
O12—K—O14 | 118.80 (14) | O9—C8—O3 | 122.9 (5) |
O7i—K—O13 | 113.81 (13) | O9—C8—C9 | 126.0 (4) |
O10—K—O13 | 152.94 (12) | O3—C8—C9 | 111.1 (4) |
O12—K—O13 | 59.92 (12) | C14—C9—C10 | 120.6 (5) |
O14—K—O13 | 58.88 (12) | C14—C9—C8 | 122.3 (4) |
O7i—K—O2 | 163.85 (10) | C10—C9—C8 | 117.1 (5) |
O10—K—O2 | 75.27 (10) | C11—C10—C9 | 119.0 (5) |
O12—K—O2 | 83.16 (10) | C11—C10—H10 | 120.5 |
O14—K—O2 | 84.44 (11) | C9—C10—H10 | 120.5 |
O13—K—O2 | 77.67 (11) | C12—C11—C10 | 121.1 (5) |
O7i—K—O15 | 113.74 (12) | C12—C11—H11 | 119.4 |
O10—K—O15 | 60.08 (10) | C10—C11—H11 | 119.4 |
O12—K—O15 | 152.88 (11) | C11—C12—C13 | 119.6 (5) |
O14—K—O15 | 58.09 (12) | C11—C12—H12 | 120.2 |
O13—K—O15 | 110.30 (12) | C13—C12—H12 | 120.2 |
O2—K—O15 | 69.79 (9) | C14—C13—C12 | 120.0 (5) |
O7i—K—O11 | 92.05 (10) | C14—C13—H13 | 120.0 |
O10—K—O11 | 58.07 (11) | C12—C13—H13 | 120.0 |
O12—K—O11 | 57.83 (12) | C9—C14—C13 | 119.6 (5) |
O14—K—O11 | 156.92 (12) | C9—C14—H14 | 120.2 |
O13—K—O11 | 112.81 (11) | C13—C14—H14 | 120.2 |
O2—K—O11 | 72.54 (9) | O10—C15—C16 | 109.1 (4) |
O15—K—O11 | 113.14 (11) | O10—C15—H15A | 109.9 |
O1—P—O5 | 101.31 (17) | C16—C15—H15A | 109.9 |
O1—P—O7 | 107.57 (19) | O10—C15—H15B | 109.9 |
O1—P—O8 | 109.2 (2) | C16—C15—H15B | 109.9 |
O5—P—O7 | 106.7 (2) | H15A—C15—H15B | 108.3 |
O5—P—O8 | 110.2 (2) | O11—C16—C15 | 109.5 (4) |
O7—P—O8 | 120.2 (2) | O11—C16—H16A | 109.8 |
C1—O1—P | 120.8 (2) | C15—C16—H16A | 109.8 |
C7—O2—C2 | 110.4 (3) | O11—C16—H16B | 109.8 |
C7—O2—K | 121.6 (2) | C15—C16—H16B | 109.8 |
C2—O2—K | 124.1 (2) | H16A—C16—H16B | 108.2 |
C8—O3—C3 | 115.9 (4) | O11—C17—C18 | 108.1 (4) |
C7—O4—C4 | 110.5 (3) | O11—C17—H17A | 110.1 |
C5—O5—P | 119.3 (3) | C18—C17—H17A | 110.1 |
C7—O6—C6 | 111.4 (3) | O11—C17—H17B | 110.1 |
P—O7—Kii | 131.7 (2) | C18—C17—H17B | 110.1 |
C15—O10—C26 | 112.1 (4) | H17A—C17—H17B | 108.4 |
C15—O10—K | 120.8 (3) | O12—C18—C17 | 110.5 (4) |
C26—O10—K | 116.3 (3) | O12—C18—H18A | 109.5 |
C16—O11—C17 | 114.0 (4) | C17—C18—H18A | 109.5 |
C16—O11—K | 107.4 (3) | O12—C18—H18B | 109.5 |
C17—O11—K | 106.1 (3) | C17—C18—H18B | 109.5 |
C18—O12—C19 | 114.1 (4) | H18A—C18—H18B | 108.1 |
C18—O12—K | 119.5 (3) | O12—C19—C20 | 108.5 (5) |
C19—O12—K | 116.6 (3) | O12—C19—H19A | 110.0 |
C21—O13—C20 | 112.1 (5) | C20—C19—H19A | 110.0 |
C21—O13—K | 111.7 (4) | O12—C19—H19B | 110.0 |
C20—O13—K | 111.1 (4) | C20—C19—H19B | 110.0 |
C22—O14—C23 | 113.1 (5) | H19A—C19—H19B | 108.4 |
C22—O14—K | 118.3 (3) | O13—C20—C19 | 109.0 (5) |
C23—O14—K | 120.1 (4) | O13—C20—H20A | 109.9 |
C24—O15—C25 | 111.8 (4) | C19—C20—H20A | 109.9 |
C24—O15—K | 108.2 (3) | O13—C20—H20B | 109.9 |
C25—O15—K | 107.4 (3) | C19—C20—H20B | 109.9 |
O1—C1—C2 | 108.2 (3) | H20A—C20—H20B | 108.3 |
O1—C1—C6 | 111.8 (3) | O13—C21—C22 | 109.0 (5) |
C2—C1—C6 | 107.0 (4) | O13—C21—H21A | 109.9 |
O1—C1—H1 | 109.9 | C22—C21—H21A | 109.9 |
C2—C1—H1 | 109.9 | O13—C21—H21B | 109.9 |
C6—C1—H1 | 109.9 | C22—C21—H21B | 109.9 |
O2—C2—C3 | 109.3 (4) | H21A—C21—H21B | 108.3 |
O2—C2—C1 | 108.7 (3) | O14—C22—C21 | 109.4 (6) |
C3—C2—C1 | 110.0 (4) | O14—C22—H22A | 109.8 |
O2—C2—H2 | 109.6 | C21—C22—H22A | 109.8 |
C3—C2—H2 | 109.6 | O14—C22—H22B | 109.8 |
C1—C2—H2 | 109.6 | C21—C22—H22B | 109.8 |
O3—C3—C2 | 112.6 (4) | H22A—C22—H22B | 108.2 |
O3—C3—C4 | 105.7 (3) | O14—C23—C24 | 109.3 (5) |
C2—C3—C4 | 107.2 (4) | O14—C23—H23A | 109.8 |
O3—C3—H3 | 110.4 | C24—C23—H23A | 109.8 |
C2—C3—H3 | 110.4 | O14—C23—H23B | 109.8 |
C4—C3—H3 | 110.4 | C24—C23—H23B | 109.8 |
O4—C4—C3 | 109.8 (4) | H23A—C23—H23B | 108.3 |
O4—C4—C5 | 107.7 (4) | O15—C24—C23 | 109.5 (5) |
C3—C4—C5 | 109.5 (4) | O15—C24—H24A | 109.8 |
O4—C4—H4 | 109.9 | C23—C24—H24A | 109.8 |
C3—C4—H4 | 109.9 | O15—C24—H24B | 109.8 |
C5—C4—H4 | 109.9 | C23—C24—H24B | 109.8 |
O5—C5—C6 | 113.5 (4) | H24A—C24—H24B | 108.2 |
O5—C5—C4 | 108.0 (3) | O15—C25—C26 | 109.6 (5) |
C6—C5—C4 | 107.5 (4) | O15—C25—H25A | 109.8 |
O5—C5—H5 | 109.2 | C26—C25—H25A | 109.8 |
C6—C5—H5 | 109.2 | O15—C25—H25B | 109.8 |
C4—C5—H5 | 109.2 | C26—C25—H25B | 109.8 |
O6—C6—C5 | 108.8 (4) | H25A—C25—H25B | 108.2 |
O6—C6—C1 | 109.4 (3) | O10—C26—C25 | 109.4 (5) |
C5—C6—C1 | 108.8 (3) | O10—C26—H26A | 109.8 |
O6—C6—H6 | 109.9 | C25—C26—H26A | 109.8 |
C5—C6—H6 | 109.9 | O10—C26—H26B | 109.8 |
C1—C6—H6 | 109.9 | C25—C26—H26B | 109.8 |
O6—C7—O2 | 111.3 (4) | H26A—C26—H26B | 108.2 |
Symmetry codes: (i) x, y−1, z; (ii) x, y+1, z. |
Hydrogen-bond geometry (Å) top
D—H···A | D···A |
O16A···O7iii | 2.600 (14) |
O16B···O7iii | 2.883 (9) |
O16B···O9iii | 3.033 (9) |
O17A···O8iv | 2.668 (10) |
O17B···O8iv | 2.880 (13) |
O18A···O8iii | 2.726 (15) |
O16B···O17B | 2.603 (15) |
Symmetry codes: (iii) −x+1, y−1/2, −z+1/2; (iv) −x+1, −y+1, −z. |
Experimental details
Crystal data |
Chemical formula | [K(C12H24O6)](C14H12O9P)·3H2O |
Mr | 712.67 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 293 |
a, b, c (Å) | 17.146 (2), 10.9380 (16), 18.965 (9) |
β (°) | 109.96 (2) |
V (Å3) | 3343.1 (18) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.28 |
Crystal size (mm) | 0.30 × 0.30 × 0.20 |
|
Data collection |
Diffractometer | Enraf-Nonius MACH3 diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5867, 5867, 2662 |
Rint | 0.0 |
(sin θ/λ)max (Å−1) | 0.596 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.059, 0.198, 1.04 |
No. of reflections | 5867 |
No. of parameters | 416 |
H-atom treatment | See text |
Δρmax, Δρmin (e Å−3) | 0.53, −0.31 |
Selected geometric parameters (Å, º) topK—O2 | 2.896 (3) | K—O14 | 2.823 (4) |
K—O7i | 2.771 (4) | K—O15 | 2.913 (4) |
K—O10 | 2.808 (4) | P—O1 | 1.608 (3) |
K—O11 | 2.979 (3) | P—O5 | 1.627 (3) |
K—O12 | 2.818 (4) | P—O7 | 1.472 (4) |
K—O13 | 2.830 (4) | P—O8 | 1.476 (4) |
| | | |
O1—P—O5 | 101.31 (17) | O5—P—O7 | 106.7 (2) |
O1—P—O7 | 107.57 (19) | O5—P—O8 | 110.2 (2) |
O1—P—O8 | 109.2 (2) | O7—P—O8 | 120.2 (2) |
Symmetry code: (i) x, y−1, z. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D···A |
O16A···O7ii | 2.600 (14) |
O16B···O7ii | 2.883 (9) |
O16B···O9ii | 3.033 (9) |
O17A···O8iii | 2.668 (10) |
O17B···O8iii | 2.880 (13) |
O18A···O8ii | 2.726 (15) |
O16B···O17B | 2.603 (15) |
Symmetry codes: (ii) −x+1, y−1/2, −z+1/2; (iii) −x+1, −y+1, −z. |
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Inositol phosphates have attracted the attention of a large number of chemists as a result of the role of some of these compounds as secondary messengers in signal transduction (Potter & Lampe, 1995). Our interest lies mainly in cyclic phosphorus compounds (Kumara Swamy et al., 1998; Muthiah & Kumara Swamy, 1999) and in this connection we felt that various cyclic phosphates could be generated from suitably protected inositol derivatives. It should be noted that, despite so much interest in inositol phosphates, few cyclic derivatives have been structurally characterized, although the crystal structures of two cyclic phosphates derived from inositol have been reported recently (Dietrich et al., 1999; Neidle et al., 1998). In the present paper, we report the structure of a cyclic inositol phosphate as a trihydrate of its potassium-18-crown-6 salt, viz. [K(18-crown-6)]+[myo-C6H6-2-{OC(O)Ph}-1,3,5-(O3CH)-{O2P(O)O}]-. 3H2O, (I).
An ellipsoid plot of (I), excluding the O atoms of the water molecules, is shown in Fig. 1. Apart from the six O atoms of the crown ether, potassium is coordinated to O2 of the inositol residue and to O7 of the phosphate residue in the neighbouring cell along b, leading to a chain structure (Fig. 2).
The K—O7 distance [2.771 (4) Å] is the shortest of all the K—O distances in this compound. The P—O bond distances involving the inositol residue [P—O1 1.608 (3) Å and P—O5 1.627 (3) Å] are normal but longer than the mean value of 1.580 (2) Å found by Neidle et al. (1998) in C6H6(OH)3[O3P(O)], (II).
Interestingly, in (I), the six-membered 1,3,2-dioxaphosphorinane ring adopts a boat conformation (Fig. 3) with P and C6 (the prow and stern of the boat) on the same side at distances of 0.608 and 0.675 Å, respectively, from the mean plane through C1, C5, O1 and O5 (the maximum deviation from this mean plane is 0.004 Å). This is different from (II) where all three six-membered 1,3,2-dioxaphosphorinane rings have a chair conformation (Neidle et al., 1998). It should also be noted that a chair conformation is normally found for 1,3,2-dioxaphosphorinane rings containing tri- or tetracoordinate phosphorus (Maryanoff et al., 1979). A boat conformation is found mainly for pentacoordinate phosphorus in which the 1,3,2-dioxaphosphorinane ring bridges one apical and one equatorial site of a trigonal-bipyramidal arrangement (Said et al., 1997). However, in these compounds, an apical O atom and the C atom opposite it lie at the prow and stern of the boat. It is likely that in (I), steric interactions involving the phosphorus and the C3 H atom are greater in the alternative chair conformation.
Hydrogen-bonding interactions involving O7, O8, O9 and the water O atoms are present in (I). While O7 is within hydrogen-bonding distance of O16A and O16B of a second molecule, atom O8 has intermolecular hydrogen-bonded contacts to O17A, O17B and O18A. The carbonyl O9 atom is rather weakly hydrogen bonded to O16B, judging by the long O···O distance [3.033 (9) Å]. Since it was not possible to locate or fix the water H atoms, no discussion of this aspect is possible.