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In the title compound, C
9H
9ClN
4O, the dihedral angle between the substituted phenyl and triazole rings is 4.86 (5)°. In the crystalline state, the molecules exist as centrosymmetrically related N—H
O hydrogen-bonded dimers.
Supporting information
CCDC reference: 217459
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean (C-C) = 0.003 Å
- R factor = 0.042
- wR factor = 0.117
- Data-to-parameter ratio = 14.2
checkCIF results
No syntax errors found
ADDSYM reports no extra symmetry
Alert Level B:
CELLV_02 Alert B The supplied cell volume s.u. differs from that
calculated from the cell parameter s.u.'s by > 4
Calculated cell volume su = 20.63
Cell volume su given = 16.00
REFLT_03
From the CIF: _diffrn_reflns_theta_max 27.82
From the CIF: _reflns_number_total 2060
TEST2: Reflns within _diffrn_reflns_theta_max
Count of symmetry unique reflns 2372
Completeness (_total/calc) 86.85%
Alert B: < 90% complete (theta max?)
Alert Level C:
CRYSC_01 Alert C There is an ordering error in _exptl_crystal_colour.
It should be (QUALIFIER) (INTENSITY) (BASE_COLOUR).
0 Alert Level A = Potentially serious problem
2 Alert Level B = Potential problem
1 Alert Level C = Please check
The title compound prepared by heating 3-(4-chlorophenyl)-5-methyl-1,3,4-oxadiazolin-2-one with hydrazine hydrate in ethanol. The solid obtained, (I), was crystallized from absolute ethanol (m.p. 458–459 K).
The structure was solved with DIRDIF99 (Beurskens et al., 1999) using the TRACOR option, with the input Cl atom at the origin. The positions of the amino H atoms were located from difference Fourier map and refined freely along with its isotropic displacement parameter. The methyl H atoms were constrained to an ideal geometry (C—H = 0.96 Å), with Uiso(H) = 1.5Ueq(C), but were allowed to rotate freely about the parent C—C bond. All remaining H atoms were placed in geometrically idealized position (C—H = 0.93 Å) and constrained to ride on their parent atoms with Uiso(H) = 1.2Ueq(C).
Data collection: IPDS Software Package (Stoe & Cie, 1997); cell refinement: IPDS Software Package; data reduction: IPDS Software Package; program(s) used to solve structure: DIRDIF99 (Beurskens et al., 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2003).
4-Amino-2-(
p-chlorophenyl)-5-methyl-3,4-dihydro-2
H-1,2,4-triazol-3-one
top
Crystal data top
C9H9ClN4O | Z = 2 |
Mr = 224.65 | F(000) = 232 |
Triclinic, P1 | Dx = 1.492 Mg m−3 |
Hall symbol: -P 1 | Melting point: 458 K |
a = 4.0135 (8) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 11.691 (2) Å | Cell parameters from 4074 reflections |
c = 11.986 (2) Å | θ = 12.2–27.9° |
α = 117.09 (3)° | µ = 0.36 mm−1 |
β = 90.79 (3)° | T = 293 K |
γ = 91.89 (3)° | Platelet, translucent colourless |
V = 500.17 (16) Å3 | 0.61 × 0.30 × 0.15 mm |
Data collection top
Stoe IPDS diffractometer | 1807 reflections with I > 2σ(I) |
Radiation source: sealed LFF X-ray tube, 12 x 0.4 mm | Rint = 0.024 |
Plane graphite monochromator | θmax = 27.8°, θmin = 3.9° |
Detector resolution: 9 pixels mm-1 | h = −4→4 |
rotation method scans | k = −15→15 |
4391 measured reflections | l = −15→15 |
2060 independent reflections | |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.042 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.117 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0674P)2 + 0.0798P] where P = (Fo2 + 2Fc2)/3 |
2060 reflections | (Δ/σ)max < 0.001 |
145 parameters | Δρmax = 0.17 e Å−3 |
0 restraints | Δρmin = −0.17 e Å−3 |
Crystal data top
C9H9ClN4O | γ = 91.89 (3)° |
Mr = 224.65 | V = 500.17 (16) Å3 |
Triclinic, P1 | Z = 2 |
a = 4.0135 (8) Å | Mo Kα radiation |
b = 11.691 (2) Å | µ = 0.36 mm−1 |
c = 11.986 (2) Å | T = 293 K |
α = 117.09 (3)° | 0.61 × 0.30 × 0.15 mm |
β = 90.79 (3)° | |
Data collection top
Stoe IPDS diffractometer | 1807 reflections with I > 2σ(I) |
4391 measured reflections | Rint = 0.024 |
2060 independent reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.042 | 0 restraints |
wR(F2) = 0.117 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | Δρmax = 0.17 e Å−3 |
2060 reflections | Δρmin = −0.17 e Å−3 |
145 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Cl1 | 1.01725 (13) | 0.25508 (4) | 0.25344 (5) | 0.0687 (2) | |
O3 | 0.2956 (3) | 0.84827 (10) | 0.44989 (9) | 0.0522 (3) | |
N1 | 0.5942 (4) | 0.74844 (12) | 0.14814 (11) | 0.0459 (3) | |
N2 | 0.5474 (3) | 0.73160 (11) | 0.25536 (10) | 0.0411 (3) | |
N4 | 0.3286 (3) | 0.90980 (11) | 0.28987 (10) | 0.0414 (3) | |
N41 | 0.1680 (5) | 1.02716 (13) | 0.34326 (14) | 0.0534 (4) | |
H411 | 0.311 (6) | 1.084 (2) | 0.406 (2) | 0.072 (6)* | |
H412 | 0.000 (8) | 1.018 (3) | 0.380 (3) | 0.086 (8)* | |
C3 | 0.3821 (4) | 0.83051 (12) | 0.34512 (12) | 0.0396 (3) | |
C5 | 0.4575 (4) | 0.85647 (13) | 0.17266 (13) | 0.0427 (3) | |
C6 | 0.6598 (4) | 0.61839 (12) | 0.25724 (12) | 0.0393 (3) | |
C7 | 0.7941 (5) | 0.52468 (15) | 0.14989 (14) | 0.0513 (4) | |
H7 | 0.8086 | 0.5368 | 0.0786 | 0.062* | |
C8 | 0.9069 (5) | 0.41330 (16) | 0.14796 (16) | 0.0554 (4) | |
H8 | 0.9994 | 0.3510 | 0.0761 | 0.066* | |
C9 | 0.8809 (4) | 0.39557 (14) | 0.25356 (16) | 0.0488 (4) | |
C10 | 0.7467 (5) | 0.48814 (16) | 0.36130 (15) | 0.0538 (4) | |
H10 | 0.7311 | 0.4750 | 0.4320 | 0.065* | |
C11 | 0.6354 (5) | 0.60032 (15) | 0.36411 (14) | 0.0506 (4) | |
H11 | 0.5454 | 0.6628 | 0.4364 | 0.061* | |
C51 | 0.4467 (5) | 0.91773 (17) | 0.08833 (16) | 0.0577 (4) | |
H511 | 0.5387 | 0.8618 | 0.0094 | 0.086* | |
H512 | 0.5747 | 0.9978 | 0.1259 | 0.086* | |
H513 | 0.2196 | 0.9333 | 0.0751 | 0.086* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Cl1 | 0.0770 (4) | 0.0466 (3) | 0.0876 (4) | 0.0169 (2) | 0.0015 (2) | 0.0343 (2) |
O3 | 0.0677 (8) | 0.0487 (6) | 0.0415 (5) | 0.0181 (5) | 0.0189 (5) | 0.0204 (4) |
N1 | 0.0588 (8) | 0.0433 (6) | 0.0374 (6) | 0.0113 (5) | 0.0101 (5) | 0.0190 (5) |
N2 | 0.0517 (8) | 0.0361 (5) | 0.0352 (5) | 0.0101 (5) | 0.0086 (4) | 0.0154 (4) |
N4 | 0.0472 (7) | 0.0358 (5) | 0.0397 (6) | 0.0095 (4) | 0.0050 (4) | 0.0153 (4) |
N41 | 0.0638 (10) | 0.0426 (7) | 0.0515 (7) | 0.0214 (6) | 0.0091 (6) | 0.0180 (6) |
C3 | 0.0428 (8) | 0.0353 (6) | 0.0374 (6) | 0.0060 (5) | 0.0047 (5) | 0.0133 (5) |
C5 | 0.0481 (8) | 0.0401 (6) | 0.0389 (6) | 0.0055 (5) | 0.0033 (5) | 0.0169 (5) |
C6 | 0.0411 (8) | 0.0351 (6) | 0.0398 (6) | 0.0059 (5) | 0.0042 (5) | 0.0151 (5) |
C7 | 0.0654 (11) | 0.0462 (8) | 0.0424 (7) | 0.0165 (6) | 0.0140 (6) | 0.0189 (6) |
C8 | 0.0666 (11) | 0.0430 (7) | 0.0506 (8) | 0.0185 (7) | 0.0130 (7) | 0.0150 (6) |
C9 | 0.0486 (9) | 0.0381 (7) | 0.0596 (9) | 0.0067 (6) | 0.0010 (6) | 0.0217 (6) |
C10 | 0.0665 (11) | 0.0503 (8) | 0.0511 (8) | 0.0111 (7) | 0.0076 (7) | 0.0281 (7) |
C11 | 0.0667 (11) | 0.0440 (7) | 0.0415 (7) | 0.0141 (6) | 0.0116 (6) | 0.0188 (6) |
C51 | 0.0747 (12) | 0.0554 (9) | 0.0517 (8) | 0.0145 (8) | 0.0088 (7) | 0.0312 (7) |
Geometric parameters (Å, º) top
Cl1—C9 | 1.7477 (16) | C6—C11 | 1.394 (2) |
O3—C3 | 1.2329 (17) | C7—C8 | 1.383 (2) |
N1—C5 | 1.3017 (19) | C7—H7 | 0.9300 |
N1—N2 | 1.4001 (16) | C8—C9 | 1.377 (2) |
N2—C3 | 1.3682 (18) | C8—H8 | 0.9300 |
N2—C6 | 1.4220 (18) | C9—C10 | 1.383 (2) |
N4—C5 | 1.3687 (18) | C10—C11 | 1.386 (2) |
N4—C3 | 1.3828 (18) | C10—H10 | 0.9300 |
N4—N41 | 1.4063 (17) | C11—H11 | 0.9300 |
N41—H411 | 0.92 (2) | C51—H511 | 0.9600 |
N41—H412 | 0.84 (3) | C51—H512 | 0.9600 |
C5—C51 | 1.482 (2) | C51—H513 | 0.9600 |
C6—C7 | 1.386 (2) | | |
| | | |
C5—N1—N2 | 104.81 (12) | C8—C7—H7 | 119.7 |
C3—N2—N1 | 111.97 (11) | C6—C7—H7 | 119.7 |
C3—N2—C6 | 128.90 (12) | C9—C8—C7 | 119.31 (15) |
N1—N2—C6 | 119.10 (11) | C9—C8—H8 | 120.3 |
C5—N4—C3 | 109.34 (12) | C7—C8—H8 | 120.3 |
C5—N4—N41 | 124.21 (13) | C8—C9—C10 | 120.81 (14) |
C3—N4—N41 | 126.46 (12) | C8—C9—Cl1 | 120.36 (13) |
N4—N41—H411 | 105.8 (16) | C10—C9—Cl1 | 118.84 (13) |
N4—N41—H412 | 108 (2) | C9—C10—C11 | 120.16 (15) |
H411—N41—H412 | 106 (2) | C9—C10—H10 | 119.9 |
O3—C3—N2 | 130.39 (13) | C11—C10—H10 | 119.9 |
O3—C3—N4 | 126.73 (13) | C10—C11—C6 | 119.22 (14) |
N2—C3—N4 | 102.89 (11) | C10—C11—H11 | 120.4 |
N1—C5—N4 | 110.99 (13) | C6—C11—H11 | 120.4 |
N1—C5—C51 | 125.64 (13) | C5—C51—H511 | 109.5 |
N4—C5—C51 | 123.36 (14) | C5—C51—H512 | 109.5 |
C7—C6—C11 | 119.98 (13) | H511—C51—H512 | 109.5 |
C7—C6—N2 | 118.75 (13) | C5—C51—H513 | 109.5 |
C11—C6—N2 | 121.28 (13) | H511—C51—H513 | 109.5 |
C8—C7—C6 | 120.53 (15) | H512—C51—H513 | 109.5 |
| | | |
C5—N1—N2—C3 | −0.16 (17) | N41—N4—C5—C51 | 0.9 (2) |
C5—N1—N2—C6 | 177.82 (13) | C3—N2—C6—C7 | 173.75 (15) |
N1—N2—C3—O3 | 179.45 (15) | N1—N2—C6—C7 | −3.8 (2) |
C6—N2—C3—O3 | 1.7 (3) | C3—N2—C6—C11 | −5.9 (2) |
N1—N2—C3—N4 | −0.19 (15) | N1—N2—C6—C11 | 176.50 (14) |
C6—N2—C3—N4 | −177.92 (13) | C11—C6—C7—C8 | −0.5 (3) |
C5—N4—C3—O3 | −179.20 (15) | N2—C6—C7—C8 | 179.87 (15) |
N41—N4—C3—O3 | 0.8 (3) | C6—C7—C8—C9 | 0.8 (3) |
C5—N4—C3—N2 | 0.46 (16) | C7—C8—C9—C10 | −0.6 (3) |
N41—N4—C3—N2 | −179.57 (15) | C7—C8—C9—Cl1 | 179.34 (14) |
N2—N1—C5—N4 | 0.46 (17) | C8—C9—C10—C11 | 0.2 (3) |
N2—N1—C5—C51 | 178.96 (15) | Cl1—C9—C10—C11 | −179.78 (14) |
C3—N4—C5—N1 | −0.61 (18) | C9—C10—C11—C6 | 0.1 (3) |
N41—N4—C5—N1 | 179.42 (14) | C7—C6—C11—C10 | 0.0 (3) |
C3—N4—C5—C51 | −179.15 (14) | N2—C6—C11—C10 | 179.67 (15) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N41—H411···O3i | 0.92 (2) | 2.17 (2) | 3.043 (3) | 159 (2) |
N41—H412···O3ii | 0.84 (3) | 2.30 (3) | 2.958 (2) | 135 (2) |
Symmetry codes: (i) −x+1, −y+2, −z+1; (ii) −x, −y+2, −z+1. |
Experimental details
Crystal data |
Chemical formula | C9H9ClN4O |
Mr | 224.65 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 4.0135 (8), 11.691 (2), 11.986 (2) |
α, β, γ (°) | 117.09 (3), 90.79 (3), 91.89 (3) |
V (Å3) | 500.17 (16) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.36 |
Crystal size (mm) | 0.61 × 0.30 × 0.15 |
|
Data collection |
Diffractometer | Stoe IPDS diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4391, 2060, 1807 |
Rint | 0.024 |
(sin θ/λ)max (Å−1) | 0.657 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.042, 0.117, 1.06 |
No. of reflections | 2060 |
No. of parameters | 145 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.17, −0.17 |
Selected geometric parameters (Å, º) topN1—C5 | 1.3017 (19) | N4—C5 | 1.3687 (18) |
N1—N2 | 1.4001 (16) | N4—C3 | 1.3828 (18) |
N2—C3 | 1.3682 (18) | | |
| | | |
C5—N1—N2 | 104.81 (12) | N4—N41—H412 | 108 (2) |
C3—N2—N1 | 111.97 (11) | H411—N41—H412 | 106 (2) |
C5—N4—C3 | 109.34 (12) | N2—C3—N4 | 102.89 (11) |
N4—N41—H411 | 105.8 (16) | N1—C5—N4 | 110.99 (13) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N41—H411···O3i | 0.92 (2) | 2.17 (2) | 3.043 (3) | 159 (2) |
N41—H412···O3ii | 0.84 (3) | 2.30 (3) | 2.958 (2) | 135 (2) |
Symmetry codes: (i) −x+1, −y+2, −z+1; (ii) −x, −y+2, −z+1. |
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The amino functionalized triazole derivatives serve as starting compounds for heterocyclic synthesis. The triazole moiety possesses many pharmacological properties, e.g. antimicrobial (Habib et al., 1997), antiviral (Ergen et al., 1996), anti-HIV-1 (Invidiata et al., 1996), antifungal, antimycobacterial and anticonvulsant (Gu¨lerman et al., 1997). It is also a highly potent eosinophilia inhibitor (Naito et al., 1996) and used as fungicide (Crofton, 1996) and herbicide (Tada et al., 1995). Some triazole derivatives have been evaluated for their antibacterial activity against both Gram-positive and Gram-negative bacteria (Bs et al., 1996). In view of these findings, the structure determination of the title compound, (I), was undertaken.
A perspective view of (I), including the atomic numbering scheme, is shown in Fig. 1. The bond lengths and angles in (I) are unexceptional (Table 1) and comparable with those reported for related structures (Chen et al., 1998; Wang et al., 1998; Thamotharan, Parthasarathi, Sunagar et al., 2003; Thamotharan, Parthasarathi, Hunnur et al., 2003). The sum of bond angles around N41 is 320° which indicates pyramidal geometry at N41. The dihedral angle between phenyl and triazole rings is 4.86 (5)°, while the same angles in chloro (Thamotharan, Parthasarathi, Sunagar et al., 2003) and bromo (Thamotharan, Parthasarathi, Hunnur et al., 2003) derivatives of triazole are 30.63 (9) and 8.93 (14)°, respectively. In the crystal structure, centrosymmetrically related molecules form dimeric pairs through N—H···O intermolecular hydrogen bonds (Fig. 2) and have a graph-set motif of R22(10) (Table 2) (Bernstein et al., 1995).