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The molecule of the title compound, C
8H
11NO
2, contains a strained bicyclic system with a significantly twisted imide chromophore. The five-membered ring fragment containing the imide function is strongly puckered and adopts a half-chair conformation. The six-membered ring has a slightly distorted chair conformation. The molecules are joined by strong N—H
O and weak C—H
O hydrogen bonds into infinite chains.
Supporting information
CCDC reference: 199432
Optically active (I) was prepared as described previously by Połoński
(1988). Crystals of (I) can be grown from various polar and nonpolar organic
solvents as square plates with well developed {001} faces, but due to serious
crystal defects they are not suitable for X-ray diffraction studies. However,
after many crystallization attempts we were able to choose, with the help of a
polarizing microscope, one good quality single-crystal which had the form of a
{100} plate and gave a satisfactory diffraction pattern.
The enantiomorphous space group P41212 was assigned based on the known
absolute configuration of (I). H atoms were located in the difference Fourier
map. Their positional and isotropic displacement parameters were included in
the refinement, with C—H distances in the range 0.90 (3)–1.07 (3) Å.
Data collection: KM-4 Sofware (Kuma Diffraction, 1991); cell refinement: KM-4 Software; data reduction: KM-4 Software; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: Stereochemical Workstation (Siemens, 1989); software used to prepare material for publication: SHELXL97.
(
S)-
trans-cyclohexane-1,2-dicarboximide
top
Crystal data top
C8H11NO2 | Melting point: 204 K |
Mr = 153.18 | Cu Kα radiation, λ = 1.54178 Å |
Tetragonal, P41212 | Cell parameters from 46 reflections |
a = 5.903 (1) Å | θ = 8–51° |
c = 45.164 (4) Å | µ = 0.77 mm−1 |
V = 1573.8 (3) Å3 | T = 293 K |
Z = 8 | Plate, colourless |
F(000) = 656 | 0.5 × 0.5 × 0.2 mm |
Dx = 1.292 Mg m−3 | |
Data collection top
Kuma KM-4 four-circle diffractometer | Rint = 0.051 |
Radiation source: fine-focus sealed tube | θmax = 80.1°, θmin = 3.9° |
Graphite monochromator | h = 0→7 |
ω/2θ scans | k = 0→7 |
1956 measured reflections | l = 0→57 |
1660 independent reflections | 3 standard reflections every 100 reflections |
1563 reflections with I > 2σ(I) | intensity decay: 1.5% |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.041 | All H-atom parameters refined |
wR(F2) = 0.125 | w = 1/[σ2(Fo2) + (0.0825P)2 + 0.2028P] where P = (Fo2 + 2Fc2)/3 |
S = 1.05 | (Δ/σ)max < 0.001 |
1660 reflections | Δρmax = 0.14 e Å−3 |
145 parameters | Δρmin = −0.13 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 1997), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0029 (8) |
Crystal data top
C8H11NO2 | Z = 8 |
Mr = 153.18 | Cu Kα radiation |
Tetragonal, P41212 | µ = 0.77 mm−1 |
a = 5.903 (1) Å | T = 293 K |
c = 45.164 (4) Å | 0.5 × 0.5 × 0.2 mm |
V = 1573.8 (3) Å3 | |
Data collection top
Kuma KM-4 four-circle diffractometer | Rint = 0.051 |
1956 measured reflections | 3 standard reflections every 100 reflections |
1660 independent reflections | intensity decay: 1.5% |
1563 reflections with I > 2σ(I) | |
Refinement top
R[F2 > 2σ(F2)] = 0.041 | 0 restraints |
wR(F2) = 0.125 | All H-atom parameters refined |
S = 1.05 | Δρmax = 0.14 e Å−3 |
1660 reflections | Δρmin = −0.13 e Å−3 |
145 parameters | |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O1 | 0.2199 (3) | 0.6706 (3) | 0.00123 (3) | 0.0671 (4) | |
O2 | 0.0520 (3) | 0.1146 (3) | −0.06514 (4) | 0.0776 (5) | |
C1 | 0.2221 (3) | 0.5674 (3) | −0.02201 (3) | 0.0476 (4) | |
N2 | 0.0966 (3) | 0.3754 (3) | −0.02770 (3) | 0.0521 (4) | |
H2 | −0.008 (5) | 0.330 (4) | −0.0156 (5) | 0.073 (7)* | |
C3 | 0.1516 (3) | 0.2732 (3) | −0.05451 (4) | 0.0510 (4) | |
C4 | 0.4049 (4) | 0.4204 (3) | −0.09847 (4) | 0.0556 (5) | |
H42 | 0.272 (4) | 0.506 (4) | −0.1077 (4) | 0.057 (5)* | |
H41 | 0.411 (4) | 0.273 (5) | −0.1086 (5) | 0.064 (6)* | |
C5 | 0.6283 (4) | 0.5508 (4) | −0.10154 (4) | 0.0618 (5) | |
H52 | 0.753 (5) | 0.455 (5) | −0.0931 (5) | 0.070 (7)* | |
H51 | 0.669 (4) | 0.577 (4) | −0.1228 (5) | 0.062 (6)* | |
C6 | 0.6321 (4) | 0.7729 (4) | −0.08399 (4) | 0.0625 (5) | |
H62 | 0.503 (5) | 0.881 (5) | −0.0927 (6) | 0.077 (7)* | |
H61 | 0.774 (5) | 0.828 (5) | −0.0857 (6) | 0.078 (7)* | |
C7 | 0.5717 (3) | 0.7420 (3) | −0.05110 (4) | 0.0542 (5) | |
H72 | 0.683 (5) | 0.652 (4) | −0.0401 (5) | 0.070 (7)* | |
H71 | 0.563 (5) | 0.896 (5) | −0.0411 (6) | 0.080 (7)* | |
C8 | 0.3461 (3) | 0.6220 (2) | −0.05025 (3) | 0.0414 (3) | |
H8 | 0.244 (4) | 0.716 (4) | −0.0608 (5) | 0.058 (6)* | |
C9 | 0.3594 (3) | 0.3929 (3) | −0.06570 (3) | 0.0424 (4) | |
H9 | 0.484 (4) | 0.303 (4) | −0.0577 (4) | 0.047 (5)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.0768 (9) | 0.0723 (9) | 0.0521 (6) | −0.0219 (7) | 0.0129 (6) | −0.0180 (6) |
O2 | 0.0892 (12) | 0.0611 (9) | 0.0826 (9) | −0.0357 (8) | −0.0015 (8) | −0.0158 (7) |
C1 | 0.0490 (9) | 0.0487 (9) | 0.0451 (7) | −0.0072 (7) | 0.0002 (6) | −0.0043 (6) |
N2 | 0.0513 (8) | 0.0531 (8) | 0.0519 (7) | −0.0150 (7) | 0.0029 (6) | −0.0014 (6) |
C3 | 0.0578 (10) | 0.0417 (8) | 0.0534 (8) | −0.0107 (7) | −0.0055 (7) | −0.0004 (6) |
C4 | 0.0737 (12) | 0.0488 (9) | 0.0441 (8) | −0.0080 (8) | −0.0013 (8) | −0.0087 (7) |
C5 | 0.0711 (13) | 0.0627 (11) | 0.0516 (9) | −0.0084 (10) | 0.0133 (9) | −0.0065 (8) |
C6 | 0.0706 (13) | 0.0609 (11) | 0.0561 (9) | −0.0262 (10) | 0.0094 (9) | −0.0036 (8) |
C7 | 0.0604 (11) | 0.0515 (9) | 0.0508 (8) | −0.0176 (8) | −0.0003 (7) | −0.0067 (7) |
C8 | 0.0471 (8) | 0.0356 (7) | 0.0415 (7) | −0.0034 (6) | −0.0022 (6) | −0.0018 (5) |
C9 | 0.0496 (8) | 0.0338 (7) | 0.0440 (7) | −0.0028 (6) | −0.0038 (6) | −0.0025 (5) |
Geometric parameters (Å, º) top
O1—C1 | 1.214 (2) | C5—H52 | 1.00 (3) |
O2—C3 | 1.206 (2) | C5—H51 | 1.00 (2) |
C1—N2 | 1.378 (2) | C6—C7 | 1.539 (2) |
C1—C8 | 1.506 (2) | C6—H62 | 1.07 (3) |
N2—C3 | 1.392 (2) | C6—H61 | 0.90 (3) |
N2—H2 | 0.87 (3) | C7—C8 | 1.509 (2) |
C3—C9 | 1.503 (2) | C7—H72 | 0.98 (3) |
C4—C9 | 1.513 (2) | C7—H71 | 1.02 (3) |
C4—C5 | 1.534 (3) | C8—C9 | 1.524 (2) |
C4—H42 | 1.02 (2) | C8—H8 | 0.95 (2) |
C4—H41 | 0.98 (3) | C9—H9 | 0.98 (2) |
C5—C6 | 1.532 (3) | | |
| | | |
O1—C1—N2 | 124.7 (2) | C7—C6—H62 | 105.1 (14) |
O1—C1—C8 | 129.0 (2) | C5—C6—H61 | 106.1 (17) |
N2—C1—C8 | 106.23 (13) | C7—C6—H61 | 110.0 (16) |
C1—N2—C3 | 113.17 (14) | H62—C6—H61 | 115 (2) |
C1—N2—H2 | 121.4 (17) | C8—C7—C6 | 106.56 (14) |
C3—N2—H2 | 125.4 (17) | C8—C7—H72 | 109.0 (15) |
O2—C3—N2 | 124.7 (2) | C6—C7—H72 | 113.4 (14) |
O2—C3—C9 | 129.0 (2) | C8—C7—H71 | 111.4 (16) |
N2—C3—C9 | 106.22 (13) | C6—C7—H71 | 109.6 (15) |
C9—C4—C5 | 107.16 (14) | H72—C7—H71 | 107 (2) |
C9—C4—H42 | 108.3 (11) | C1—C8—C7 | 123.46 (13) |
C5—C4—H42 | 112.1 (13) | C1—C8—C9 | 102.87 (12) |
C9—C4—H41 | 111.4 (13) | C7—C8—C9 | 111.09 (14) |
C5—C4—H41 | 111.8 (14) | C1—C8—H8 | 103.9 (14) |
H42—C4—H41 | 106.1 (19) | C7—C8—H8 | 106.0 (14) |
C6—C5—C4 | 113.3 (2) | C9—C8—H8 | 108.8 (14) |
C6—C5—H52 | 106.0 (14) | C3—C9—C4 | 121.63 (14) |
C4—C5—H52 | 108.3 (15) | C3—C9—C8 | 102.80 (13) |
C6—C5—H51 | 111.2 (13) | C4—C9—C8 | 111.21 (13) |
C4—C5—H51 | 111.6 (14) | C3—C9—H9 | 103.5 (12) |
H52—C5—H51 | 106.0 (19) | C4—C9—H9 | 106.6 (11) |
C5—C6—C7 | 113.2 (2) | C8—C9—H9 | 110.7 (12) |
C5—C6—H62 | 108.1 (14) | | |
| | | |
O1—C1—N2—C3 | −172.1 (2) | C6—C7—C8—C9 | 59.7 (2) |
C8—C1—N2—C3 | 10.5 (2) | O2—C3—C9—C4 | 33.8 (3) |
C1—N2—C3—O2 | −173.8 (2) | N2—C3—C9—C4 | −148.9 (2) |
C1—N2—C3—C9 | 8.8 (2) | O2—C3—C9—C8 | 159.0 (2) |
C9—C4—C5—C6 | −53.0 (2) | N2—C3—C9—C8 | −23.7 (2) |
C4—C5—C6—C7 | 53.5 (3) | C5—C4—C9—C3 | 179.6 (2) |
C5—C6—C7—C8 | −54.3 (2) | C5—C4—C9—C8 | 58.4 (2) |
O1—C1—C8—C7 | 31.6 (3) | C1—C8—C9—C3 | 29.0 (2) |
N2—C1—C8—C7 | −151.2 (2) | C7—C8—C9—C3 | 162.93 (13) |
O1—C1—C8—C9 | 158.0 (2) | C1—C8—C9—C4 | 160.64 (15) |
N2—C1—C8—C9 | −24.8 (2) | C7—C8—C9—C4 | −65.4 (2) |
C6—C7—C8—C1 | −177.6 (2) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O1i | 0.87 (3) | 2.11 (3) | 2.933 (2) | 159 (2) |
C7—H71···O1ii | 1.02 (3) | 2.70 (3) | 3.658 (2) | 157 (2) |
C6—H61···O2iii | 0.90 (3) | 2.54 (3) | 3.308 (2) | 144 (2) |
Symmetry codes: (i) y−1, x, −z; (ii) y, x+1, −z; (iii) x+1, y+1, z. |
Experimental details
Crystal data |
Chemical formula | C8H11NO2 |
Mr | 153.18 |
Crystal system, space group | Tetragonal, P41212 |
Temperature (K) | 293 |
a, c (Å) | 5.903 (1), 45.164 (4) |
V (Å3) | 1573.8 (3) |
Z | 8 |
Radiation type | Cu Kα |
µ (mm−1) | 0.77 |
Crystal size (mm) | 0.5 × 0.5 × 0.2 |
|
Data collection |
Diffractometer | Kuma KM-4 four-circle diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 1956, 1660, 1563 |
Rint | 0.051 |
(sin θ/λ)max (Å−1) | 0.639 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.041, 0.125, 1.05 |
No. of reflections | 1660 |
No. of parameters | 145 |
H-atom treatment | All H-atom parameters refined |
Δρmax, Δρmin (e Å−3) | 0.14, −0.13 |
Selected torsion angles (º) topC8—C1—N2—C3 | 10.5 (2) | C6—C7—C8—C9 | 59.7 (2) |
C1—N2—C3—C9 | 8.8 (2) | N2—C3—C9—C8 | −23.7 (2) |
C9—C4—C5—C6 | −53.0 (2) | C5—C4—C9—C8 | 58.4 (2) |
C4—C5—C6—C7 | 53.5 (3) | C1—C8—C9—C3 | 29.0 (2) |
C5—C6—C7—C8 | −54.3 (2) | C7—C8—C9—C4 | −65.4 (2) |
N2—C1—C8—C9 | −24.8 (2) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O1i | 0.87 (3) | 2.11 (3) | 2.933 (2) | 159 (2) |
C7—H71···O1ii | 1.02 (3) | 2.70 (3) | 3.658 (2) | 157 (2) |
C6—H61···O2iii | 0.90 (3) | 2.54 (3) | 3.308 (2) | 144 (2) |
Symmetry codes: (i) y−1, x, −z; (ii) y, x+1, −z; (iii) x+1, y+1, z. |
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The title compound, (I), can be considered as an example of a strongly twisted succinimide moiety and imide chromophore arising from trans-fusion of the six- and five-membered rings. Compound (I) was synthesized, together with some optically active succinic anhydrides and imides of known absolute configuration, in order to study the chiroptical properties of five-membered ring compounds with C2 and C2v local symmetry of the chromophores (Połoński, 1988).
It has been shown that twisting of the chromophores profoundly influences the circular dichroism spectra of cyclic anhydrides and imides (Połoński, 1988; Połoński et al., 1993). Since the molecular geometry parameters of (I) were known only from semiempirical MNDO Please define calculations (Połoński et al., 1993), we decided to determine the structure of the S,S enantiomer of (I) by single-crystal X-ray analysis, and the results are presented here. \sch
A view of the molecule of (I) with the atom-labelling scheme is shown in Fig. 1 and torsion angles are given in Table 1. A search of the Cambridge Structural Database (CSD, Version?; Allen & Kennard, 1993) revealed that monocyclic as well as bicyclic succinimide and dithiosuccinimide derivatives exhibit various degrees of puckering of the five-membered ring, with the puckering amplitude (Cremer & Pople, 1975) being as high as 0.269 Å in tetramethyldithiosuccinimide (CSD refcode NINTAF; Ratajczak-Sitarz et al., 1996) or 0.285 Å in 1,6-dimethyl-8-hydroxy-8-azabicyclo[4.3.0]nonane-7,9-dione (CSD refcode DENVAT; Hengjin et al., 1985), and only 0.021 Å in succinimide (Fronczek, 1995). The puckering of the succinimide fragment of (I) is very similar to that of NINTAF and DENVAT, with a puckering amplitude of 0.289 (2) Å and a phase angle of 268.6 (4)° (266.8 and 272.5° for NINTAF and DENVAT, respectively), indicating a half-chair conformation of the five-membered ring. The six-membered ring has a slightly distorted chair conformation, with the absolute values of the endocyclic torsion angles in the range 53.0 (2)–65.4 (2)°.
Molecules of (I) are connected in the crystal via a strong N2—H2···O1(y - 1, x, -z) hydrogen bond and two weak C—H···O interactions (Table 2) into infinite polar chains. There is a striking similarity between the one-dimensional aggregate structure of this chiral imide and the one-dimensional networks formed by the achiral molecules of 3,6-dithia-3,4,5,6-tetrahydrophthalimide (DTTHP; Kirfel et al., 1975) and 3,4,5,6-tetrahydrophthalimide (THP; Kirfel, 1975) (Fig. 2). The latter two compounds are less strained than (I) but their bicyclic skeletons are significantly flattened, due to the C8═C9 double bond. Similar to (I), their polar one-dimensional networks are stabilized by an N—H···O hydrogen bond and C—H···O interactions. However, one of the short C—H.·O contacts in DTTHP is substituted by an S···O contact of 3.480 Å. Substantial differences in the packing modes of these one-dimensional aggregates are observed at the higher level of the structure organization, leading to different space-group symmetries in each case [P41212 for (I), Pmca for THP and P21/c for DTTHP].