Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S0108270112021099/fa3273sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S0108270112021099/fa3273Isup2.hkl | |
Structure factor file (CIF format) https://doi.org/10.1107/S0108270112021099/fa3273IIsup3.hkl |
CCDC references: 889383; 889384
For related literature, see: Flack (1983); Flack & Bernardinelli (2008); Hooft et al. (2008); Maltais et al. (2002, 2011); Mohler et al. (2007); Poirier (2008, 2010); Rouillard et al. (2008); Spek (2009); Tchedam-Ngatcha, Luu-The, Labrie & Poirier (2005); Yan et al. (2009).
Compounds (I) and (III) were synthesized by modification of an approach developed in our laboratory (Rouillard et al., 2008). Briefly, aminolysis of the oxirane at C-3 of androsterone with L and D-isoleucine methyl esters provided the corresponding amino alcohols, which were treated with sodium methoxide to afford azalactones (I) and (III). Compounds (II) and (IV) were prepared according to the method of Maltais et al. (2002) by treatment of each amino alcohol with triphosgene. X-ray-quality crystals of (I) and (II) were obtained by slow diffusion of hexane into a methylene chloride solution of the compound (hexane–methylene chloride 1:1 v/v) followed by slow evaporation.
H atoms were treated as riding, with C—H = 1.00 (methyl), 0.99 (methylene) and 0.98 Å (remainding H atoms), and with Uiso(H) = 1.5Ueq(C) for methyl H atoms and 1.2Ueq(C) otherwise. The N-bound H atom of (I) was located by difference Fourier synthesis; its coordinates were refined and its Uiso(H) value was constrained to 1.2Ueq(N).
Data collection: APEX2 [or SMART?] (Bruker, 2011) for (I); APEX2 (Bruker, 2011) for (II). For both compounds, cell refinement: SAINT (Bruker, 2011); data reduction: XPREP (Bruker, 2008); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: UdMX (Maris, 2004).
C26H41NO3 | F(000) = 456 |
Mr = 415.60 | Dx = 1.162 Mg m−3 |
Monoclinic, P21 | Cu Kα radiation, λ = 1.54178 Å |
Hall symbol: P 2yb | Cell parameters from 9878 reflections |
a = 13.07929 (17) Å | θ = 2.8–72.3° |
b = 5.82873 (8) Å | µ = 0.58 mm−1 |
c = 16.3140 (2) Å | T = 150 K |
β = 107.3095 (6)° | Plate, colorless |
V = 1187.37 (3) Å3 | 0.25 × 0.11 × 0.05 mm |
Z = 2 |
Bruker SMART 6000 diffractometer | 4334 independent reflections |
Radiation source: Rotating Anode | 4159 reflections with I > 2σ(I) |
Helios optics monochromator | Rint = 0.038 |
Detector resolution: 5.5 pixels mm-1 | θmax = 72.5°, θmin = 2.8° |
ω scans | h = −16→16 |
Absorption correction: multi-scan (SADABS; Sheldrick, 2008) | k = −6→7 |
Tmin = 0.810, Tmax = 0.971 | l = −20→20 |
36176 measured reflections |
Refinement on F2 | Hydrogen site location: inferred from neighbouring sites |
Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
R[F2 > 2σ(F2)] = 0.040 | w = 1/[σ2(Fo2) + (0.0735P)2 + 0.0832P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.107 | (Δ/σ)max = 0.001 |
S = 1.07 | Δρmax = 0.18 e Å−3 |
4334 reflections | Δρmin = −0.22 e Å−3 |
279 parameters | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
1 restraint | Extinction coefficient: 0.0046 (6) |
Primary atom site location: structure-invariant direct methods | Absolute structure: Flack (1983), 1733 Friedel pairs |
Secondary atom site location: difference Fourier map | Absolute structure parameter: 0.12 (18) |
C26H41NO3 | V = 1187.37 (3) Å3 |
Mr = 415.60 | Z = 2 |
Monoclinic, P21 | Cu Kα radiation |
a = 13.07929 (17) Å | µ = 0.58 mm−1 |
b = 5.82873 (8) Å | T = 150 K |
c = 16.3140 (2) Å | 0.25 × 0.11 × 0.05 mm |
β = 107.3095 (6)° |
Bruker SMART 6000 diffractometer | 4334 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2008) | 4159 reflections with I > 2σ(I) |
Tmin = 0.810, Tmax = 0.971 | Rint = 0.038 |
36176 measured reflections |
R[F2 > 2σ(F2)] = 0.040 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.107 | Δρmax = 0.18 e Å−3 |
S = 1.07 | Δρmin = −0.22 e Å−3 |
4334 reflections | Absolute structure: Flack (1983), 1733 Friedel pairs |
279 parameters | Absolute structure parameter: 0.12 (18) |
1 restraint |
Experimental. X-ray crystallographic data for II were collected from a single-crystal sample, which was mounted on a loop fiber. Data were collected using a Bruker Platform diffractometer, equipped with a Bruker SMART 4 K Charged-Coupled Device (CCD) Area Detector using the program APEX2 and a Nonius FR591 rotating anode equiped with a Helios optics The crystal-to-detector distance was 5.0 cm, and the data collection was carried out in 512 x 512 pixel mode. The initial unit-cell parameters were determined by a least-squares fit of the angular setting of strong reflections, collected by a 10.0 degree scan in 33 frames over four different parts of the reciprocal space (132 frames total). One complete sphere of data was collected, to better than 0.80 Å resolution. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O3 | 0.52314 (8) | 0.07663 (19) | 0.32235 (6) | 0.0379 (2) | |
O17 | 0.06829 (11) | −0.1106 (3) | −0.25496 (8) | 0.0586 (3) | |
O22 | 0.66845 (9) | −0.1271 (2) | 0.37364 (8) | 0.0487 (3) | |
N20 | 0.59879 (10) | 0.4242 (2) | 0.44884 (8) | 0.0398 (3) | |
H20 | 0.6198 (15) | 0.526 (4) | 0.4163 (12) | 0.048* | |
C1 | 0.29683 (11) | 0.0893 (3) | 0.21029 (9) | 0.0339 (3) | |
H1A | 0.2221 | 0.0367 | 0.2002 | 0.041* | |
H1B | 0.3396 | −0.0438 | 0.2018 | 0.041* | |
C2 | 0.34086 (11) | 0.1731 (3) | 0.30308 (9) | 0.0373 (3) | |
H2A | 0.2920 | 0.2915 | 0.3136 | 0.045* | |
H2B | 0.3415 | 0.0430 | 0.3422 | 0.045* | |
C3 | 0.45313 (11) | 0.2730 (3) | 0.32467 (8) | 0.0329 (3) | |
C4 | 0.46339 (11) | 0.4434 (3) | 0.25645 (8) | 0.0321 (3) | |
H4A | 0.5401 | 0.4805 | 0.2668 | 0.039* | |
H4B | 0.4260 | 0.5871 | 0.2627 | 0.039* | |
C5 | 0.41735 (10) | 0.3551 (2) | 0.16430 (8) | 0.0281 (3) | |
H5 | 0.4600 | 0.2164 | 0.1591 | 0.034* | |
C6 | 0.43276 (11) | 0.5300 (3) | 0.09925 (8) | 0.0339 (3) | |
H6A | 0.5094 | 0.5719 | 0.1138 | 0.041* | |
H6B | 0.3917 | 0.6707 | 0.1024 | 0.041* | |
C7 | 0.39531 (10) | 0.4339 (3) | 0.00793 (8) | 0.0337 (3) | |
H7A | 0.4433 | 0.3068 | 0.0029 | 0.040* | |
H7B | 0.4006 | 0.5556 | −0.0330 | 0.040* | |
C8 | 0.27975 (10) | 0.3456 (2) | −0.01628 (8) | 0.0279 (3) | |
H8 | 0.2310 | 0.4793 | −0.0187 | 0.033* | |
C9 | 0.26458 (10) | 0.1737 (2) | 0.05167 (8) | 0.0274 (3) | |
H9 | 0.3143 | 0.0429 | 0.0524 | 0.033* | |
C10 | 0.29910 (10) | 0.2763 (2) | 0.14390 (8) | 0.0280 (3) | |
C11 | 0.15039 (11) | 0.0715 (3) | 0.02490 (9) | 0.0338 (3) | |
H11A | 0.1461 | −0.0484 | 0.0667 | 0.041* | |
H11B | 0.0987 | 0.1938 | 0.0270 | 0.041* | |
C12 | 0.11827 (11) | −0.0331 (3) | −0.06529 (9) | 0.0366 (3) | |
H12A | 0.1637 | −0.1685 | −0.0660 | 0.044* | |
H12B | 0.0428 | −0.0849 | −0.0808 | 0.044* | |
C13 | 0.13103 (10) | 0.1415 (3) | −0.13083 (9) | 0.0324 (3) | |
C14 | 0.24756 (11) | 0.2288 (3) | −0.10365 (8) | 0.0318 (3) | |
H14 | 0.2938 | 0.0893 | −0.0973 | 0.038* | |
C15 | 0.25711 (12) | 0.3548 (3) | −0.18407 (9) | 0.0426 (4) | |
H15A | 0.3328 | 0.3697 | −0.1832 | 0.051* | |
H15B | 0.2242 | 0.5092 | −0.1893 | 0.051* | |
C16 | 0.19432 (14) | 0.1950 (4) | −0.25711 (10) | 0.0562 (5) | |
H16A | 0.1513 | 0.2860 | −0.3067 | 0.067* | |
H16B | 0.2441 | 0.0957 | −0.2765 | 0.067* | |
C17 | 0.12173 (12) | 0.0507 (3) | −0.22022 (9) | 0.0424 (4) | |
C18 | 0.04720 (11) | 0.3353 (3) | −0.14356 (9) | 0.0362 (3) | |
H18A | 0.0570 | 0.4446 | −0.1863 | 0.054* | |
H18B | 0.0564 | 0.4147 | −0.0889 | 0.054* | |
H18C | −0.0249 | 0.2696 | −0.1636 | 0.054* | |
C19 | 0.22363 (11) | 0.4728 (3) | 0.15140 (9) | 0.0354 (3) | |
H19A | 0.1533 | 0.4097 | 0.1489 | 0.053* | |
H19B | 0.2159 | 0.5809 | 0.1039 | 0.053* | |
H19C | 0.2537 | 0.5528 | 0.2061 | 0.053* | |
C20 | 0.48529 (12) | 0.3760 (3) | 0.41440 (9) | 0.0389 (3) | |
H20A | 0.4450 | 0.5204 | 0.4131 | 0.047* | |
H20B | 0.4643 | 0.2687 | 0.4536 | 0.047* | |
C21 | 0.66213 (12) | 0.2164 (3) | 0.45255 (9) | 0.0391 (4) | |
H21 | 0.6612 | 0.1343 | 0.5062 | 0.047* | |
C22 | 0.61980 (11) | 0.0455 (3) | 0.37897 (9) | 0.0353 (3) | |
C23 | 0.77868 (13) | 0.2790 (4) | 0.46404 (10) | 0.0470 (4) | |
H23A | 0.7828 | 0.3710 | 0.4141 | 0.056* | |
H23B | 0.8203 | 0.1365 | 0.4652 | 0.056* | |
C24 | 0.82962 (15) | 0.4159 (5) | 0.54688 (12) | 0.0627 (6) | |
H24 | 0.7791 | 0.5428 | 0.5492 | 0.075* | |
C25 | 0.8442 (2) | 0.2714 (6) | 0.62589 (13) | 0.0866 (9) | |
H25A | 0.7740 | 0.2219 | 0.6294 | 0.130* | |
H25B | 0.8805 | 0.3616 | 0.6769 | 0.130* | |
H25C | 0.8875 | 0.1364 | 0.6228 | 0.130* | |
C26 | 0.9336 (3) | 0.5256 (9) | 0.5437 (2) | 0.1324 (16) | |
H26A | 0.9630 | 0.6198 | 0.5951 | 0.199* | |
H26B | 0.9199 | 0.6225 | 0.4924 | 0.199* | |
H26C | 0.9852 | 0.4055 | 0.5415 | 0.199* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O3 | 0.0412 (5) | 0.0341 (6) | 0.0350 (5) | 0.0077 (4) | 0.0063 (4) | −0.0024 (4) |
O17 | 0.0693 (8) | 0.0492 (8) | 0.0478 (6) | −0.0078 (7) | 0.0028 (6) | −0.0149 (6) |
O22 | 0.0442 (6) | 0.0391 (6) | 0.0605 (7) | 0.0104 (5) | 0.0119 (5) | 0.0008 (5) |
N20 | 0.0463 (7) | 0.0404 (8) | 0.0307 (6) | 0.0008 (6) | 0.0082 (5) | −0.0046 (5) |
C1 | 0.0347 (6) | 0.0335 (8) | 0.0336 (7) | −0.0022 (6) | 0.0102 (5) | 0.0044 (6) |
C2 | 0.0400 (7) | 0.0408 (9) | 0.0330 (7) | −0.0005 (7) | 0.0136 (6) | 0.0060 (6) |
C3 | 0.0366 (6) | 0.0321 (8) | 0.0293 (6) | 0.0052 (6) | 0.0087 (5) | −0.0007 (6) |
C4 | 0.0333 (6) | 0.0311 (8) | 0.0308 (6) | −0.0016 (6) | 0.0078 (5) | −0.0018 (6) |
C5 | 0.0268 (6) | 0.0269 (7) | 0.0300 (6) | −0.0004 (5) | 0.0075 (5) | −0.0012 (5) |
C6 | 0.0340 (6) | 0.0344 (8) | 0.0331 (6) | −0.0081 (6) | 0.0094 (5) | 0.0009 (6) |
C7 | 0.0307 (6) | 0.0404 (9) | 0.0303 (6) | −0.0048 (6) | 0.0094 (5) | 0.0019 (6) |
C8 | 0.0272 (6) | 0.0269 (7) | 0.0297 (6) | 0.0005 (5) | 0.0086 (5) | 0.0016 (5) |
C9 | 0.0262 (6) | 0.0231 (6) | 0.0316 (6) | 0.0017 (5) | 0.0066 (5) | 0.0016 (5) |
C10 | 0.0278 (6) | 0.0261 (7) | 0.0305 (6) | 0.0006 (5) | 0.0094 (5) | 0.0020 (5) |
C11 | 0.0315 (6) | 0.0306 (8) | 0.0376 (7) | −0.0054 (5) | 0.0076 (5) | 0.0047 (6) |
C12 | 0.0338 (6) | 0.0280 (7) | 0.0422 (7) | −0.0048 (6) | 0.0025 (5) | 0.0012 (6) |
C13 | 0.0309 (6) | 0.0294 (8) | 0.0335 (7) | −0.0005 (6) | 0.0042 (5) | −0.0019 (6) |
C14 | 0.0307 (6) | 0.0315 (8) | 0.0319 (7) | 0.0013 (5) | 0.0075 (5) | −0.0024 (5) |
C15 | 0.0399 (7) | 0.0570 (10) | 0.0314 (7) | −0.0076 (7) | 0.0110 (6) | −0.0003 (7) |
C16 | 0.0538 (9) | 0.0806 (14) | 0.0337 (8) | −0.0127 (10) | 0.0121 (7) | −0.0110 (8) |
C17 | 0.0408 (7) | 0.0434 (9) | 0.0365 (7) | 0.0029 (7) | 0.0014 (6) | −0.0075 (7) |
C18 | 0.0300 (6) | 0.0350 (8) | 0.0392 (7) | 0.0012 (6) | 0.0035 (5) | 0.0032 (6) |
C19 | 0.0352 (7) | 0.0354 (8) | 0.0354 (7) | 0.0052 (6) | 0.0102 (5) | −0.0031 (6) |
C20 | 0.0452 (7) | 0.0421 (9) | 0.0297 (6) | 0.0068 (7) | 0.0115 (5) | −0.0022 (6) |
C21 | 0.0405 (7) | 0.0468 (10) | 0.0294 (6) | 0.0025 (6) | 0.0093 (5) | 0.0040 (6) |
C22 | 0.0370 (6) | 0.0343 (8) | 0.0355 (6) | 0.0023 (6) | 0.0119 (5) | 0.0071 (6) |
C23 | 0.0427 (8) | 0.0602 (11) | 0.0390 (7) | −0.0065 (8) | 0.0133 (6) | −0.0016 (8) |
C24 | 0.0487 (9) | 0.0815 (16) | 0.0499 (9) | −0.0030 (10) | 0.0022 (7) | −0.0153 (10) |
C25 | 0.0881 (16) | 0.114 (2) | 0.0406 (10) | 0.0264 (16) | −0.0076 (10) | −0.0063 (12) |
C26 | 0.093 (2) | 0.179 (4) | 0.126 (3) | −0.074 (3) | 0.0335 (18) | −0.075 (3) |
O3—C22 | 1.3378 (17) | C12—C13 | 1.5210 (19) |
O3—C3 | 1.4732 (17) | C12—H12a | 0.9900 |
O17—C17 | 1.207 (2) | C12—H12b | 0.9900 |
O22—C22 | 1.2070 (19) | C13—C17 | 1.5219 (19) |
N20—C20 | 1.4499 (19) | C13—C14 | 1.5415 (18) |
N20—C21 | 1.459 (2) | C13—C18 | 1.544 (2) |
N20—H20 | 0.89 (2) | C14—C15 | 1.541 (2) |
C1—C2 | 1.5306 (19) | C14—H14 | 1.0000 |
C1—C10 | 1.5430 (18) | C15—C16 | 1.543 (2) |
C1—H1a | 0.9900 | C15—H15a | 0.9900 |
C1—H1b | 0.9900 | C15—H15b | 0.9900 |
C2—C3 | 1.5205 (19) | C16—C17 | 1.520 (3) |
C2—H2a | 0.9900 | C16—H16a | 0.9900 |
C2—H2b | 0.9900 | C16—H16b | 0.9900 |
C3—C20 | 1.5214 (18) | C18—H18a | 0.9800 |
C3—C4 | 1.5271 (19) | C18—H18b | 0.9800 |
C4—C5 | 1.5325 (17) | C18—H18c | 0.9800 |
C4—H4a | 0.9900 | C19—H19a | 0.9800 |
C4—H4b | 0.9900 | C19—H19b | 0.9800 |
C5—C6 | 1.5274 (18) | C19—H19c | 0.9800 |
C5—C10 | 1.5516 (16) | C20—H20a | 0.9900 |
C5—H5 | 1.0000 | C20—H20b | 0.9900 |
C6—C7 | 1.5292 (18) | C21—C23 | 1.524 (2) |
C6—H6a | 0.9900 | C21—C22 | 1.531 (2) |
C6—H6b | 0.9900 | C21—H21 | 1.0000 |
C7—C8 | 1.5330 (17) | C23—C24 | 1.540 (2) |
C7—H7a | 0.9900 | C23—H23a | 0.9900 |
C7—H7b | 0.9900 | C23—H23b | 0.9900 |
C8—C14 | 1.5216 (17) | C24—C25 | 1.504 (3) |
C8—C9 | 1.5502 (17) | C24—C26 | 1.518 (3) |
C8—H8 | 1.0000 | C24—H24 | 1.0000 |
C9—C11 | 1.5452 (17) | C25—H25a | 0.9800 |
C9—C10 | 1.5560 (17) | C25—H25b | 0.9800 |
C9—H9 | 1.0000 | C25—H25c | 0.9800 |
C10—C19 | 1.5405 (19) | C26—H26a | 0.9800 |
C11—C12 | 1.5317 (19) | C26—H26b | 0.9800 |
C11—H11a | 0.9900 | C26—H26c | 0.9800 |
C11—H11b | 0.9900 | ||
C22—O3—C3 | 123.68 (12) | C12—C13—C14 | 108.94 (11) |
C20—N20—C21 | 111.01 (13) | C17—C13—C14 | 100.41 (10) |
C20—N20—H20 | 111.1 (13) | C12—C13—C18 | 111.23 (11) |
C21—N20—H20 | 107.7 (13) | C17—C13—C18 | 105.93 (12) |
C2—C1—C10 | 112.87 (12) | C14—C13—C18 | 113.51 (12) |
C2—C1—H1A | 109.0 | C8—C14—C15 | 120.96 (12) |
C10—C1—H1A | 109.0 | C8—C14—C13 | 113.04 (11) |
C2—C1—H1B | 109.0 | C15—C14—C13 | 103.66 (10) |
C10—C1—H1B | 109.0 | C8—C14—H14 | 106.1 |
H1A—C1—H1B | 107.8 | C15—C14—H14 | 106.1 |
C3—C2—C1 | 113.86 (11) | C13—C14—H14 | 106.1 |
C3—C2—H2A | 108.8 | C14—C15—C16 | 102.14 (13) |
C1—C2—H2A | 108.8 | C14—C15—H15A | 111.3 |
C3—C2—H2B | 108.8 | C16—C15—H15A | 111.3 |
C1—C2—H2B | 108.8 | C14—C15—H15B | 111.3 |
H2A—C2—H2B | 107.7 | C16—C15—H15B | 111.3 |
O3—C3—C2 | 105.15 (12) | H15A—C15—H15B | 109.2 |
O3—C3—C20 | 109.60 (11) | C17—C16—C15 | 106.27 (12) |
C2—C3—C20 | 110.21 (11) | C17—C16—H16A | 110.5 |
O3—C3—C4 | 107.25 (10) | C15—C16—H16A | 110.5 |
C2—C3—C4 | 111.62 (11) | C17—C16—H16B | 110.5 |
C20—C3—C4 | 112.67 (13) | C15—C16—H16B | 110.5 |
C3—C4—C5 | 113.72 (12) | H16A—C16—H16B | 108.7 |
C3—C4—H4A | 108.8 | O17—C17—C16 | 125.98 (15) |
C5—C4—H4A | 108.8 | O17—C17—C13 | 126.21 (16) |
C3—C4—H4B | 108.8 | C16—C17—C13 | 107.79 (13) |
C5—C4—H4B | 108.8 | C13—C18—H18A | 109.5 |
H4A—C4—H4B | 107.7 | C13—C18—H18B | 109.5 |
C6—C5—C4 | 111.27 (11) | H18A—C18—H18B | 109.5 |
C6—C5—C10 | 112.19 (10) | C13—C18—H18C | 109.5 |
C4—C5—C10 | 112.68 (10) | H18A—C18—H18C | 109.5 |
C6—C5—H5 | 106.8 | H18B—C18—H18C | 109.5 |
C4—C5—H5 | 106.8 | C10—C19—H19A | 109.5 |
C10—C5—H5 | 106.8 | C10—C19—H19B | 109.5 |
C5—C6—C7 | 111.24 (12) | H19A—C19—H19B | 109.5 |
C5—C6—H6A | 109.4 | C10—C19—H19C | 109.5 |
C7—C6—H6A | 109.4 | H19A—C19—H19C | 109.5 |
C5—C6—H6B | 109.4 | H19B—C19—H19C | 109.5 |
C7—C6—H6B | 109.4 | N20—C20—C3 | 114.04 (11) |
H6A—C6—H6B | 108.0 | N20—C20—H20A | 108.7 |
C6—C7—C8 | 112.30 (10) | C3—C20—H20A | 108.7 |
C6—C7—H7A | 109.1 | N20—C20—H20B | 108.7 |
C8—C7—H7A | 109.1 | C3—C20—H20B | 108.7 |
C6—C7—H7B | 109.1 | H20A—C20—H20B | 107.6 |
C8—C7—H7B | 109.1 | N20—C21—C23 | 109.94 (14) |
H7A—C7—H7B | 107.9 | N20—C21—C22 | 116.07 (12) |
C14—C8—C7 | 111.62 (10) | C23—C21—C22 | 111.55 (13) |
C14—C8—C9 | 108.79 (11) | N20—C21—H21 | 106.2 |
C7—C8—C9 | 111.03 (10) | C23—C21—H21 | 106.2 |
C14—C8—H8 | 108.4 | C22—C21—H21 | 106.2 |
C7—C8—H8 | 108.4 | O22—C22—O3 | 118.25 (15) |
C9—C8—H8 | 108.4 | O22—C22—C21 | 121.55 (13) |
C11—C9—C8 | 111.45 (10) | O3—C22—C21 | 120.00 (13) |
C11—C9—C10 | 113.54 (10) | C21—C23—C24 | 112.82 (13) |
C8—C9—C10 | 112.40 (11) | C21—C23—H23A | 109.0 |
C11—C9—H9 | 106.3 | C24—C23—H23A | 109.0 |
C8—C9—H9 | 106.3 | C21—C23—H23B | 109.0 |
C10—C9—H9 | 106.3 | C24—C23—H23B | 109.0 |
C19—C10—C1 | 108.83 (10) | H23A—C23—H23B | 107.8 |
C19—C10—C5 | 112.60 (11) | C25—C24—C26 | 112.3 (2) |
C1—C10—C5 | 106.54 (10) | C25—C24—C23 | 111.9 (2) |
C19—C10—C9 | 110.74 (10) | C26—C24—C23 | 110.27 (17) |
C1—C10—C9 | 110.29 (11) | C25—C24—H24 | 107.4 |
C5—C10—C9 | 107.77 (9) | C26—C24—H24 | 107.4 |
C12—C11—C9 | 113.00 (11) | C23—C24—H24 | 107.4 |
C12—C11—H11A | 109.0 | C24—C25—H25A | 109.5 |
C9—C11—H11A | 109.0 | C24—C25—H25B | 109.5 |
C12—C11—H11B | 109.0 | H25A—C25—H25B | 109.5 |
C9—C11—H11B | 109.0 | C24—C25—H25C | 109.5 |
H11A—C11—H11B | 107.8 | H25A—C25—H25C | 109.5 |
C13—C12—C11 | 110.65 (12) | H25B—C25—H25C | 109.5 |
C13—C12—H12A | 109.5 | C24—C26—H26A | 109.5 |
C11—C12—H12A | 109.5 | C24—C26—H26B | 109.5 |
C13—C12—H12B | 109.5 | H26A—C26—H26B | 109.5 |
C11—C12—H12B | 109.5 | C24—C26—H26C | 109.5 |
H12A—C12—H12B | 108.1 | H26A—C26—H26C | 109.5 |
C12—C13—C17 | 116.52 (13) | H26B—C26—H26C | 109.5 |
C10—C1—C2—C3 | −54.94 (16) | C11—C12—C13—C14 | 56.60 (15) |
C22—O3—C3—C2 | −139.66 (13) | C11—C12—C13—C18 | −69.26 (14) |
C22—O3—C3—C20 | −21.20 (18) | C7—C8—C14—C15 | −55.32 (17) |
C22—O3—C3—C4 | 101.41 (14) | C9—C8—C14—C15 | −178.18 (11) |
C1—C2—C3—O3 | −68.38 (15) | C7—C8—C14—C13 | −178.98 (12) |
C1—C2—C3—C20 | 173.58 (13) | C9—C8—C14—C13 | 58.16 (14) |
C1—C2—C3—C4 | 47.58 (17) | C12—C13—C14—C8 | −60.52 (15) |
O3—C3—C4—C5 | 67.14 (14) | C17—C13—C14—C8 | 176.60 (12) |
C2—C3—C4—C5 | −47.53 (16) | C18—C13—C14—C8 | 64.00 (15) |
C20—C3—C4—C5 | −172.16 (11) | C12—C13—C14—C15 | 166.75 (12) |
C3—C4—C5—C6 | −178.40 (11) | C17—C13—C14—C15 | 43.86 (15) |
C3—C4—C5—C10 | 54.59 (15) | C18—C13—C14—C15 | −68.73 (14) |
C4—C5—C6—C7 | 175.26 (11) | C8—C14—C15—C16 | −168.26 (13) |
C10—C5—C6—C7 | −57.47 (15) | C13—C14—C15—C16 | −40.28 (16) |
C5—C6—C7—C8 | 54.05 (16) | C14—C15—C16—C17 | 20.65 (18) |
C6—C7—C8—C14 | −174.20 (12) | C15—C16—C17—O17 | −171.87 (17) |
C6—C7—C8—C9 | −52.63 (16) | C15—C16—C17—C13 | 6.53 (19) |
C14—C8—C9—C11 | −53.05 (14) | C12—C13—C17—O17 | 30.2 (2) |
C7—C8—C9—C11 | −176.26 (11) | C14—C13—C17—O17 | 147.59 (16) |
C14—C8—C9—C10 | 178.20 (10) | C18—C13—C17—O17 | −94.10 (19) |
C7—C8—C9—C10 | 54.99 (14) | C12—C13—C17—C16 | −148.22 (14) |
C2—C1—C10—C19 | −64.18 (14) | C14—C13—C17—C16 | −30.80 (16) |
C2—C1—C10—C5 | 57.47 (14) | C18—C13—C17—C16 | 87.51 (15) |
C2—C1—C10—C9 | 174.16 (10) | C21—N20—C20—C3 | −58.68 (17) |
C6—C5—C10—C19 | −64.65 (14) | O3—C3—C20—N20 | 50.36 (17) |
C4—C5—C10—C19 | 61.86 (14) | C2—C3—C20—N20 | 165.63 (13) |
C6—C5—C10—C1 | 176.12 (11) | C4—C3—C20—N20 | −68.97 (17) |
C4—C5—C10—C1 | −57.36 (14) | C20—N20—C21—C23 | 163.93 (11) |
C6—C5—C10—C9 | 57.76 (14) | C20—N20—C21—C22 | 36.15 (16) |
C4—C5—C10—C9 | −175.72 (11) | C3—O3—C22—O22 | 176.53 (12) |
C11—C9—C10—C19 | −60.62 (14) | C3—O3—C22—C21 | 1.5 (2) |
C8—C9—C10—C19 | 67.04 (13) | N20—C21—C22—O22 | 176.62 (14) |
C11—C9—C10—C1 | 59.91 (14) | C23—C21—C22—O22 | 49.6 (2) |
C8—C9—C10—C1 | −172.44 (10) | N20—C21—C22—O3 | −8.46 (19) |
C11—C9—C10—C5 | 175.83 (11) | C23—C21—C22—O3 | −135.45 (15) |
C8—C9—C10—C5 | −56.52 (13) | N20—C21—C23—C24 | 59.92 (19) |
C8—C9—C11—C12 | 53.00 (16) | C22—C21—C23—C24 | −169.84 (16) |
C10—C9—C11—C12 | −178.85 (11) | C21—C23—C24—C25 | 69.0 (2) |
C9—C11—C12—C13 | −54.84 (15) | C21—C23—C24—C26 | −165.3 (3) |
C11—C12—C13—C17 | 169.22 (11) |
D—H···A | D—H | H···A | D···A | D—H···A |
N20—H20···O22i | 0.89 (2) | 2.29 (2) | 3.1369 (19) | 158.5 (17) |
Symmetry code: (i) x, y+1, z. |
C28H43NO5 | F(000) = 1032 |
Mr = 473.63 | Dx = 1.200 Mg m−3 |
Orthorhombic, P212121 | Cu Kα radiation, λ = 1.54178 Å |
Hall symbol: P 2ac 2ab | Cell parameters from 9843 reflections |
a = 6.3941 (2) Å | θ = 3.1–69.5° |
b = 18.1440 (7) Å | µ = 0.65 mm−1 |
c = 22.6047 (9) Å | T = 150 K |
V = 2622.47 (17) Å3 | Needle, colorless |
Z = 4 | 0.12 × 0.05 × 0.05 mm |
Bruker Microstar diffractometer | 4933 independent reflections |
Radiation source: Rotating Anode | 4697 reflections with I > 2σ(I) |
Helios optics monochromator | Rint = 0.052 |
Detector resolution: 8.3 pixels mm-1 | θmax = 69.7°, θmin = 3.1° |
ω scans | h = −7→6 |
Absorption correction: multi-scan (SADABS; Sheldrick, 2008) | k = −22→22 |
Tmin = 0.787, Tmax = 0.968 | l = −27→27 |
43157 measured reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.037 | H-atom parameters constrained |
wR(F2) = 0.101 | w = 1/[σ2(Fo2) + (0.0555P)2 + 0.4002P] where P = (Fo2 + 2Fc2)/3 |
S = 1.06 | (Δ/σ)max = 0.001 |
4933 reflections | Δρmax = 0.23 e Å−3 |
312 parameters | Δρmin = −0.14 e Å−3 |
0 restraints | Absolute structure: Flack (1983), 2087 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.06 (18) |
C28H43NO5 | V = 2622.47 (17) Å3 |
Mr = 473.63 | Z = 4 |
Orthorhombic, P212121 | Cu Kα radiation |
a = 6.3941 (2) Å | µ = 0.65 mm−1 |
b = 18.1440 (7) Å | T = 150 K |
c = 22.6047 (9) Å | 0.12 × 0.05 × 0.05 mm |
Bruker Microstar diffractometer | 4933 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2008) | 4697 reflections with I > 2σ(I) |
Tmin = 0.787, Tmax = 0.968 | Rint = 0.052 |
43157 measured reflections |
R[F2 > 2σ(F2)] = 0.037 | H-atom parameters constrained |
wR(F2) = 0.101 | Δρmax = 0.23 e Å−3 |
S = 1.06 | Δρmin = −0.14 e Å−3 |
4933 reflections | Absolute structure: Flack (1983), 2087 Friedel pairs |
312 parameters | Absolute structure parameter: 0.06 (18) |
0 restraints |
Experimental. X-ray crystallographic data for I were collected from a single-crystal sample, which was mounted on a loop fiber. Data were collected using a Bruker microstar diffractometer equiped with a Platinum 135 CCD Detector, a Helios optics and a Kappa goniometer. The crystal-to-detector distance was 4.0 cm, and the data collection was carried out in 512 x 512 pixel mode. The initial unit-cell parameters were determined by a least-squares fit of the angular setting of strong reflections, collected by a 10.0 degree scan in 33 frames over three different parts of the reciprocal space (99 frames total). |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O3 | 0.89616 (15) | 0.90363 (6) | 0.94546 (5) | 0.0391 (2) | |
O17 | 0.8538 (3) | 0.41672 (8) | 0.80521 (7) | 0.0773 (5) | |
O21 | 1.16688 (18) | 0.98214 (7) | 0.93853 (7) | 0.0554 (3) | |
O23 | 0.6895 (2) | 1.09194 (8) | 0.84905 (6) | 0.0587 (3) | |
O24 | 0.8294 (2) | 1.19946 (7) | 0.87641 (6) | 0.0503 (3) | |
N20 | 0.82854 (19) | 1.02289 (7) | 0.94985 (7) | 0.0407 (3) | |
C1 | 0.6224 (2) | 0.77298 (8) | 0.95171 (7) | 0.0384 (3) | |
H1A | 0.5445 | 0.7359 | 0.9751 | 0.046* | |
H1B | 0.7735 | 0.7645 | 0.9584 | 0.046* | |
C2 | 0.5659 (3) | 0.84999 (9) | 0.97449 (7) | 0.0395 (3) | |
H2A | 0.4121 | 0.8561 | 0.9735 | 0.047* | |
H2B | 0.6120 | 0.8548 | 1.0161 | 0.047* | |
C3 | 0.6666 (2) | 0.91022 (8) | 0.93794 (7) | 0.0358 (3) | |
C4 | 0.6195 (2) | 0.89995 (9) | 0.87252 (7) | 0.0374 (3) | |
H4A | 0.6956 | 0.9378 | 0.8495 | 0.045* | |
H4B | 0.4679 | 0.9071 | 0.8657 | 0.045* | |
C5 | 0.6832 (2) | 0.82361 (8) | 0.85086 (7) | 0.0362 (3) | |
H5 | 0.8360 | 0.8189 | 0.8596 | 0.043* | |
C6 | 0.6611 (3) | 0.81504 (9) | 0.78390 (7) | 0.0436 (4) | |
H6A | 0.5115 | 0.8170 | 0.7728 | 0.052* | |
H6B | 0.7341 | 0.8561 | 0.7637 | 0.052* | |
C7 | 0.7545 (3) | 0.74192 (9) | 0.76422 (7) | 0.0431 (4) | |
H7A | 0.9075 | 0.7430 | 0.7710 | 0.052* | |
H7B | 0.7306 | 0.7357 | 0.7212 | 0.052* | |
C8 | 0.6612 (2) | 0.67605 (9) | 0.79700 (7) | 0.0386 (3) | |
H8 | 0.5108 | 0.6712 | 0.7856 | 0.046* | |
C9 | 0.6744 (2) | 0.68692 (9) | 0.86494 (7) | 0.0371 (3) | |
H9 | 0.8268 | 0.6913 | 0.8742 | 0.044* | |
C10 | 0.5744 (2) | 0.76076 (9) | 0.88555 (7) | 0.0353 (3) | |
C11 | 0.5978 (3) | 0.61848 (9) | 0.89893 (8) | 0.0452 (4) | |
H11A | 0.6233 | 0.6259 | 0.9417 | 0.054* | |
H11B | 0.4450 | 0.6132 | 0.8931 | 0.054* | |
C12 | 0.7063 (3) | 0.54724 (9) | 0.87903 (8) | 0.0494 (4) | |
H12A | 0.8565 | 0.5494 | 0.8895 | 0.059* | |
H12B | 0.6436 | 0.5047 | 0.8999 | 0.059* | |
C13 | 0.6833 (3) | 0.53688 (9) | 0.81254 (8) | 0.0443 (4) | |
C14 | 0.7736 (2) | 0.60495 (9) | 0.78105 (7) | 0.0398 (3) | |
H14 | 0.9196 | 0.6106 | 0.7962 | 0.048* | |
C15 | 0.7951 (3) | 0.58031 (10) | 0.71633 (8) | 0.0469 (4) | |
H15A | 0.6584 | 0.5812 | 0.6958 | 0.056* | |
H15B | 0.8952 | 0.6119 | 0.6946 | 0.056* | |
C16 | 0.8780 (3) | 0.50133 (10) | 0.72248 (8) | 0.0510 (4) | |
H16A | 0.8171 | 0.4691 | 0.6916 | 0.061* | |
H16B | 1.0322 | 0.5004 | 0.7188 | 0.061* | |
C17 | 0.8113 (3) | 0.47586 (10) | 0.78369 (9) | 0.0529 (4) | |
C18 | 0.4553 (3) | 0.51990 (11) | 0.79537 (9) | 0.0525 (4) | |
H18A | 0.4082 | 0.4756 | 0.8163 | 0.079* | |
H18B | 0.4465 | 0.5117 | 0.7526 | 0.079* | |
H18C | 0.3660 | 0.5616 | 0.8063 | 0.079* | |
C19 | 0.3361 (2) | 0.76058 (10) | 0.87603 (8) | 0.0434 (4) | |
H19A | 0.2723 | 0.7225 | 0.9009 | 0.065* | |
H19B | 0.3054 | 0.7503 | 0.8344 | 0.065* | |
H19C | 0.2789 | 0.8089 | 0.8867 | 0.065* | |
C20 | 0.6240 (2) | 0.98918 (9) | 0.95876 (8) | 0.0393 (3) | |
H20A | 0.5152 | 1.0133 | 0.9344 | 0.047* | |
H20B | 0.5816 | 0.9906 | 1.0009 | 0.047* | |
C21 | 0.9800 (2) | 0.97169 (9) | 0.94408 (8) | 0.0416 (4) | |
C22 | 0.8665 (2) | 1.10123 (9) | 0.94325 (8) | 0.0422 (3) | |
H22 | 1.0215 | 1.1087 | 0.9430 | 0.051* | |
C23 | 0.7827 (3) | 1.12879 (9) | 0.88457 (8) | 0.0428 (4) | |
C24 | 0.7549 (3) | 1.23225 (11) | 0.82245 (8) | 0.0569 (5) | |
H24A | 0.8032 | 1.2030 | 0.7886 | 0.085* | |
H24B | 0.8091 | 1.2826 | 0.8191 | 0.085* | |
H24C | 0.6017 | 1.2334 | 0.8228 | 0.085* | |
C25 | 0.7780 (3) | 1.14530 (10) | 0.99506 (8) | 0.0488 (4) | |
H25A | 0.6250 | 1.1374 | 0.9967 | 0.059* | |
H25B | 0.8021 | 1.1984 | 0.9875 | 0.059* | |
C26 | 0.8715 (3) | 1.12570 (10) | 1.05524 (9) | 0.0543 (4) | |
H26 | 0.8480 | 1.0719 | 1.0623 | 0.065* | |
C27 | 0.7581 (5) | 1.16812 (15) | 1.10331 (11) | 0.0830 (8) | |
H27A | 0.8176 | 1.1554 | 1.1419 | 0.125* | |
H27B | 0.6093 | 1.1552 | 1.1027 | 0.125* | |
H27C | 0.7741 | 1.2211 | 1.0964 | 0.125* | |
C28 | 1.1076 (4) | 1.13994 (12) | 1.05650 (11) | 0.0695 (6) | |
H28A | 1.1353 | 1.1912 | 1.0452 | 0.104* | |
H28B | 1.1774 | 1.1067 | 1.0286 | 0.104* | |
H28C | 1.1612 | 1.1310 | 1.0965 | 0.104* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O3 | 0.0219 (5) | 0.0418 (6) | 0.0535 (6) | 0.0018 (4) | −0.0026 (4) | −0.0037 (5) |
O17 | 0.1024 (13) | 0.0486 (8) | 0.0809 (10) | 0.0158 (8) | 0.0149 (10) | 0.0053 (7) |
O21 | 0.0230 (5) | 0.0551 (7) | 0.0881 (9) | −0.0030 (5) | −0.0003 (6) | −0.0076 (7) |
O23 | 0.0612 (8) | 0.0610 (8) | 0.0539 (7) | −0.0118 (7) | −0.0124 (6) | −0.0026 (6) |
O24 | 0.0504 (7) | 0.0462 (6) | 0.0543 (7) | −0.0016 (5) | −0.0060 (6) | 0.0030 (5) |
N20 | 0.0248 (6) | 0.0399 (7) | 0.0573 (8) | −0.0012 (5) | 0.0004 (6) | −0.0066 (6) |
C1 | 0.0325 (7) | 0.0433 (8) | 0.0393 (8) | −0.0026 (6) | 0.0019 (6) | 0.0035 (6) |
C2 | 0.0309 (7) | 0.0476 (9) | 0.0401 (8) | −0.0017 (7) | 0.0034 (6) | 0.0003 (7) |
C3 | 0.0210 (6) | 0.0410 (8) | 0.0452 (8) | −0.0005 (6) | 0.0004 (6) | −0.0014 (6) |
C4 | 0.0294 (7) | 0.0388 (8) | 0.0440 (8) | −0.0018 (6) | −0.0033 (6) | 0.0030 (6) |
C5 | 0.0290 (7) | 0.0403 (8) | 0.0393 (7) | −0.0028 (6) | −0.0004 (6) | 0.0034 (6) |
C6 | 0.0490 (9) | 0.0422 (8) | 0.0395 (8) | −0.0020 (7) | 0.0000 (7) | 0.0047 (6) |
C7 | 0.0441 (9) | 0.0459 (9) | 0.0393 (8) | −0.0032 (7) | 0.0022 (7) | 0.0030 (7) |
C8 | 0.0333 (7) | 0.0414 (8) | 0.0410 (8) | −0.0030 (6) | −0.0009 (6) | 0.0005 (6) |
C9 | 0.0306 (7) | 0.0401 (8) | 0.0406 (8) | −0.0014 (6) | −0.0019 (6) | 0.0027 (6) |
C10 | 0.0257 (7) | 0.0400 (8) | 0.0403 (7) | −0.0023 (6) | −0.0015 (6) | 0.0024 (6) |
C11 | 0.0479 (9) | 0.0430 (8) | 0.0447 (8) | −0.0041 (7) | 0.0016 (7) | 0.0036 (7) |
C12 | 0.0573 (11) | 0.0406 (9) | 0.0503 (9) | −0.0003 (8) | −0.0017 (8) | 0.0057 (7) |
C13 | 0.0427 (9) | 0.0399 (8) | 0.0503 (9) | −0.0026 (7) | 0.0006 (7) | −0.0005 (7) |
C14 | 0.0312 (7) | 0.0430 (8) | 0.0453 (8) | −0.0029 (6) | −0.0012 (6) | −0.0011 (7) |
C15 | 0.0442 (9) | 0.0496 (9) | 0.0468 (9) | −0.0017 (8) | 0.0036 (7) | −0.0037 (7) |
C16 | 0.0473 (10) | 0.0504 (10) | 0.0554 (10) | 0.0020 (8) | 0.0021 (8) | −0.0095 (8) |
C17 | 0.0520 (10) | 0.0426 (9) | 0.0640 (11) | −0.0032 (8) | 0.0004 (9) | −0.0035 (8) |
C18 | 0.0457 (10) | 0.0514 (10) | 0.0603 (10) | −0.0123 (8) | 0.0032 (8) | −0.0049 (8) |
C19 | 0.0276 (7) | 0.0485 (9) | 0.0540 (9) | −0.0036 (7) | −0.0015 (6) | 0.0008 (7) |
C20 | 0.0228 (7) | 0.0429 (8) | 0.0520 (9) | 0.0011 (6) | 0.0035 (6) | −0.0040 (7) |
C21 | 0.0259 (7) | 0.0468 (9) | 0.0520 (9) | 0.0002 (6) | −0.0022 (7) | −0.0074 (7) |
C22 | 0.0306 (7) | 0.0435 (8) | 0.0525 (9) | −0.0025 (6) | −0.0035 (7) | −0.0026 (7) |
C23 | 0.0315 (8) | 0.0475 (9) | 0.0495 (9) | −0.0006 (7) | 0.0007 (7) | −0.0040 (7) |
C24 | 0.0576 (11) | 0.0597 (11) | 0.0535 (10) | 0.0057 (9) | −0.0030 (9) | 0.0061 (8) |
C25 | 0.0461 (9) | 0.0437 (9) | 0.0565 (10) | 0.0039 (8) | −0.0033 (8) | −0.0050 (8) |
C26 | 0.0638 (11) | 0.0467 (9) | 0.0524 (10) | −0.0017 (8) | −0.0087 (9) | 0.0007 (8) |
C27 | 0.111 (2) | 0.0780 (16) | 0.0599 (13) | 0.0130 (15) | −0.0044 (14) | −0.0092 (11) |
C28 | 0.0747 (15) | 0.0624 (12) | 0.0713 (13) | −0.0173 (11) | −0.0277 (12) | 0.0102 (10) |
O3—C21 | 1.347 (2) | C12—C13 | 1.522 (2) |
O3—C3 | 1.4826 (16) | C12—H12a | 0.9900 |
O17—C17 | 1.209 (2) | C12—H12b | 0.9900 |
O21—C21 | 1.216 (2) | C13—C17 | 1.523 (2) |
O23—C23 | 1.203 (2) | C13—C14 | 1.538 (2) |
O24—C23 | 1.330 (2) | C13—C18 | 1.540 (3) |
O24—C24 | 1.438 (2) | C14—C15 | 1.536 (2) |
N20—C21 | 1.349 (2) | C14—H14 | 1.0000 |
N20—C22 | 1.450 (2) | C15—C16 | 1.534 (3) |
N20—C20 | 1.4579 (19) | C15—H15a | 0.9900 |
C1—C2 | 1.532 (2) | C15—H15b | 0.9900 |
C1—C10 | 1.543 (2) | C16—C17 | 1.520 (3) |
C1—H1a | 0.9900 | C16—H16a | 0.9900 |
C1—H1b | 0.9900 | C16—H16b | 0.9900 |
C2—C3 | 1.514 (2) | C18—H18a | 0.9800 |
C2—H2a | 0.9900 | C18—H18b | 0.9800 |
C2—H2b | 0.9900 | C18—H18c | 0.9800 |
C3—C4 | 1.520 (2) | C19—H19a | 0.9800 |
C3—C20 | 1.532 (2) | C19—H19b | 0.9800 |
C4—C5 | 1.525 (2) | C19—H19c | 0.9800 |
C4—H4a | 0.9900 | C20—H20a | 0.9900 |
C4—H4b | 0.9900 | C20—H20b | 0.9900 |
C5—C6 | 1.528 (2) | C22—C23 | 1.515 (2) |
C5—C10 | 1.549 (2) | C22—C25 | 1.527 (2) |
C5—H5 | 1.0000 | C22—H22 | 1.0000 |
C6—C7 | 1.521 (2) | C24—H24a | 0.9800 |
C6—H6a | 0.9900 | C24—H24b | 0.9800 |
C6—H6b | 0.9900 | C24—H24c | 0.9800 |
C7—C8 | 1.528 (2) | C25—C26 | 1.528 (3) |
C7—H7a | 0.9900 | C25—H25a | 0.9900 |
C7—H7b | 0.9900 | C25—H25b | 0.9900 |
C8—C14 | 1.520 (2) | C26—C27 | 1.516 (3) |
C8—C9 | 1.551 (2) | C26—C28 | 1.532 (3) |
C8—H8 | 1.0000 | C26—H26 | 1.0000 |
C9—C11 | 1.540 (2) | C27—H27a | 0.9800 |
C9—C10 | 1.556 (2) | C27—H27b | 0.9800 |
C9—H9 | 1.0000 | C27—H27c | 0.9800 |
C10—C19 | 1.539 (2) | C28—H28a | 0.9800 |
C11—C12 | 1.534 (2) | C28—H28b | 0.9800 |
C11—H11a | 0.9900 | C28—H28c | 0.9800 |
C11—H11b | 0.9900 | ||
C21—O3—C3 | 108.52 (11) | C14—C13—C18 | 113.55 (15) |
C23—O24—C24 | 116.25 (15) | C8—C14—C15 | 121.02 (14) |
C21—N20—C22 | 123.03 (13) | C8—C14—C13 | 113.21 (13) |
C21—N20—C20 | 111.65 (13) | C15—C14—C13 | 103.93 (13) |
C22—N20—C20 | 125.16 (13) | C8—C14—H14 | 105.9 |
C2—C1—C10 | 114.20 (13) | C15—C14—H14 | 105.9 |
C2—C1—H1A | 108.7 | C13—C14—H14 | 105.9 |
C10—C1—H1A | 108.7 | C16—C15—C14 | 102.50 (14) |
C2—C1—H1B | 108.7 | C16—C15—H15A | 111.3 |
C10—C1—H1B | 108.7 | C14—C15—H15A | 111.3 |
H1A—C1—H1B | 107.6 | C16—C15—H15B | 111.3 |
C3—C2—C1 | 112.00 (13) | C14—C15—H15B | 111.3 |
C3—C2—H2A | 109.2 | H15A—C15—H15B | 109.2 |
C1—C2—H2A | 109.2 | C17—C16—C15 | 105.65 (14) |
C3—C2—H2B | 109.2 | C17—C16—H16A | 110.6 |
C1—C2—H2B | 109.2 | C15—C16—H16A | 110.6 |
H2A—C2—H2B | 107.9 | C17—C16—H16B | 110.6 |
O3—C3—C2 | 107.47 (12) | C15—C16—H16B | 110.6 |
O3—C3—C4 | 107.31 (12) | H16A—C16—H16B | 108.7 |
C2—C3—C4 | 110.99 (13) | O17—C17—C16 | 124.96 (18) |
O3—C3—C20 | 102.49 (11) | O17—C17—C13 | 126.41 (18) |
C2—C3—C20 | 115.57 (13) | C16—C17—C13 | 108.63 (15) |
C4—C3—C20 | 112.22 (13) | C13—C18—H18A | 109.5 |
C3—C4—C5 | 111.77 (12) | C13—C18—H18B | 109.5 |
C3—C4—H4A | 109.3 | H18A—C18—H18B | 109.5 |
C5—C4—H4A | 109.3 | C13—C18—H18C | 109.5 |
C3—C4—H4B | 109.3 | H18A—C18—H18C | 109.5 |
C5—C4—H4B | 109.3 | H18B—C18—H18C | 109.5 |
H4A—C4—H4B | 107.9 | C10—C19—H19A | 109.5 |
C4—C5—C6 | 112.70 (12) | C10—C19—H19B | 109.5 |
C4—C5—C10 | 112.72 (13) | H19A—C19—H19B | 109.5 |
C6—C5—C10 | 112.64 (13) | C10—C19—H19C | 109.5 |
C4—C5—H5 | 106.0 | H19A—C19—H19C | 109.5 |
C6—C5—H5 | 106.0 | H19B—C19—H19C | 109.5 |
C10—C5—H5 | 106.0 | N20—C20—C3 | 100.96 (12) |
C7—C6—C5 | 110.01 (13) | N20—C20—H20A | 111.6 |
C7—C6—H6A | 109.7 | C3—C20—H20A | 111.6 |
C5—C6—H6A | 109.7 | N20—C20—H20B | 111.6 |
C7—C6—H6B | 109.7 | C3—C20—H20B | 111.6 |
C5—C6—H6B | 109.7 | H20A—C20—H20B | 109.4 |
H6A—C6—H6B | 108.2 | O21—C21—O3 | 122.46 (15) |
C6—C7—C8 | 112.79 (14) | O21—C21—N20 | 127.47 (16) |
C6—C7—H7A | 109.0 | O3—C21—N20 | 110.08 (13) |
C8—C7—H7A | 109.0 | N20—C22—C23 | 110.76 (13) |
C6—C7—H7B | 109.0 | N20—C22—C25 | 111.86 (14) |
C8—C7—H7B | 109.0 | C23—C22—C25 | 111.56 (14) |
H7A—C7—H7B | 107.8 | N20—C22—H22 | 107.5 |
C14—C8—C7 | 111.37 (13) | C23—C22—H22 | 107.5 |
C14—C8—C9 | 108.50 (13) | C25—C22—H22 | 107.5 |
C7—C8—C9 | 111.09 (13) | O23—C23—O24 | 123.69 (16) |
C14—C8—H8 | 108.6 | O23—C23—C22 | 125.17 (16) |
C7—C8—H8 | 108.6 | O24—C23—C22 | 111.12 (14) |
C9—C8—H8 | 108.6 | O24—C24—H24A | 109.5 |
C11—C9—C8 | 111.98 (13) | O24—C24—H24B | 109.5 |
C11—C9—C10 | 114.46 (13) | H24A—C24—H24B | 109.5 |
C8—C9—C10 | 112.56 (12) | O24—C24—H24C | 109.5 |
C11—C9—H9 | 105.7 | H24A—C24—H24C | 109.5 |
C8—C9—H9 | 105.7 | H24B—C24—H24C | 109.5 |
C10—C9—H9 | 105.7 | C22—C25—C26 | 114.59 (15) |
C19—C10—C1 | 109.45 (13) | C22—C25—H25A | 108.6 |
C19—C10—C5 | 112.06 (13) | C26—C25—H25A | 108.6 |
C1—C10—C5 | 107.18 (12) | C22—C25—H25B | 108.6 |
C19—C10—C9 | 111.30 (13) | C26—C25—H25B | 108.6 |
C1—C10—C9 | 109.40 (12) | H25A—C25—H25B | 107.6 |
C5—C10—C9 | 107.32 (12) | C27—C26—C25 | 109.43 (18) |
C12—C11—C9 | 112.89 (14) | C27—C26—C28 | 111.9 (2) |
C12—C11—H11A | 109.0 | C25—C26—C28 | 111.28 (18) |
C9—C11—H11A | 109.0 | C27—C26—H26 | 108.0 |
C12—C11—H11B | 109.0 | C25—C26—H26 | 108.0 |
C9—C11—H11B | 109.0 | C28—C26—H26 | 108.0 |
H11A—C11—H11B | 107.8 | C26—C27—H27A | 109.5 |
C13—C12—C11 | 110.49 (15) | C26—C27—H27B | 109.5 |
C13—C12—H12A | 109.6 | H27A—C27—H27B | 109.5 |
C11—C12—H12A | 109.6 | C26—C27—H27C | 109.5 |
C13—C12—H12B | 109.6 | H27A—C27—H27C | 109.5 |
C11—C12—H12B | 109.6 | H27B—C27—H27C | 109.5 |
H12A—C12—H12B | 108.1 | C26—C28—H28A | 109.5 |
C12—C13—C17 | 117.43 (16) | C26—C28—H28B | 109.5 |
C12—C13—C14 | 108.76 (14) | H28A—C28—H28B | 109.5 |
C17—C13—C14 | 100.59 (14) | C26—C28—H28C | 109.5 |
C12—C13—C18 | 111.41 (15) | H28A—C28—H28C | 109.5 |
C17—C13—C18 | 104.79 (14) | H28B—C28—H28C | 109.5 |
C10—C1—C2—C3 | −54.23 (18) | C7—C8—C14—C13 | −179.36 (13) |
C21—O3—C3—C2 | −145.87 (13) | C9—C8—C14—C13 | 58.08 (17) |
C21—O3—C3—C4 | 94.70 (14) | C12—C13—C14—C8 | −61.12 (18) |
C21—O3—C3—C20 | −23.64 (17) | C17—C13—C14—C8 | 174.92 (14) |
C1—C2—C3—O3 | −64.49 (16) | C18—C13—C14—C8 | 63.54 (18) |
C1—C2—C3—C4 | 52.57 (17) | C12—C13—C14—C15 | 165.72 (14) |
C1—C2—C3—C20 | −178.19 (13) | C17—C13—C14—C15 | 41.77 (16) |
O3—C3—C4—C5 | 62.36 (15) | C18—C13—C14—C15 | −69.62 (17) |
C2—C3—C4—C5 | −54.80 (16) | C8—C14—C15—C16 | −169.60 (14) |
C20—C3—C4—C5 | 174.20 (12) | C13—C14—C15—C16 | −41.07 (16) |
C3—C4—C5—C6 | −173.32 (13) | C14—C15—C16—C17 | 23.51 (18) |
C3—C4—C5—C10 | 57.81 (16) | C15—C16—C17—O17 | −177.7 (2) |
C4—C5—C6—C7 | 172.30 (13) | C15—C16—C17—C13 | 2.4 (2) |
C10—C5—C6—C7 | −58.79 (18) | C12—C13—C17—O17 | 35.3 (3) |
C5—C6—C7—C8 | 54.96 (19) | C14—C13—C17—O17 | 153.1 (2) |
C6—C7—C8—C14 | −173.99 (14) | C18—C13—C17—O17 | −88.9 (2) |
C6—C7—C8—C9 | −52.93 (19) | C12—C13—C17—C16 | −144.80 (17) |
C14—C8—C9—C11 | −52.60 (17) | C14—C13—C17—C16 | −27.05 (18) |
C7—C8—C9—C11 | −175.34 (14) | C18—C13—C17—C16 | 90.97 (17) |
C14—C8—C9—C10 | 176.77 (12) | C21—N20—C20—C3 | −17.20 (17) |
C7—C8—C9—C10 | 54.03 (17) | C22—N20—C20—C3 | 158.28 (15) |
C2—C1—C10—C19 | −68.09 (17) | O3—C3—C20—N20 | 23.38 (15) |
C2—C1—C10—C5 | 53.66 (17) | C2—C3—C20—N20 | 139.93 (13) |
C2—C1—C10—C9 | 169.71 (12) | C4—C3—C20—N20 | −91.43 (15) |
C4—C5—C10—C19 | 64.89 (17) | C3—O3—C21—O21 | −166.44 (17) |
C6—C5—C10—C19 | −64.01 (18) | C3—O3—C21—N20 | 13.80 (18) |
C4—C5—C10—C1 | −55.21 (16) | C22—N20—C21—O21 | 7.6 (3) |
C6—C5—C10—C1 | 175.90 (13) | C20—N20—C21—O21 | −176.85 (19) |
C4—C5—C10—C9 | −172.63 (12) | C22—N20—C21—O3 | −172.70 (14) |
C6—C5—C10—C9 | 58.47 (16) | C20—N20—C21—O3 | 2.90 (19) |
C11—C9—C10—C19 | −62.06 (17) | C21—N20—C22—C23 | 105.04 (17) |
C8—C9—C10—C19 | 67.30 (16) | C20—N20—C22—C23 | −70.0 (2) |
C11—C9—C10—C1 | 59.02 (17) | C21—N20—C22—C25 | −129.83 (17) |
C8—C9—C10—C1 | −171.62 (12) | C20—N20—C22—C25 | 55.2 (2) |
C11—C9—C10—C5 | 174.99 (13) | C24—O24—C23—O23 | 2.3 (3) |
C8—C9—C10—C5 | −55.65 (15) | C24—O24—C23—C22 | −179.04 (14) |
C8—C9—C11—C12 | 52.63 (19) | N20—C22—C23—O23 | 2.9 (2) |
C10—C9—C11—C12 | −177.72 (13) | C25—C22—C23—O23 | −122.44 (19) |
C9—C11—C12—C13 | −54.7 (2) | N20—C22—C23—O24 | −175.77 (13) |
C11—C12—C13—C17 | 170.24 (15) | C25—C22—C23—O24 | 58.92 (18) |
C11—C12—C13—C14 | 56.97 (19) | N20—C22—C25—C26 | 61.0 (2) |
C11—C12—C13—C18 | −68.93 (19) | C23—C22—C25—C26 | −174.31 (15) |
C7—C8—C14—C15 | −55.1 (2) | C22—C25—C26—C27 | −175.07 (19) |
C9—C8—C14—C15 | −177.63 (13) | C22—C25—C26—C28 | 60.8 (2) |
Experimental details
(I) | (II) | |
Crystal data | ||
Chemical formula | C26H41NO3 | C28H43NO5 |
Mr | 415.60 | 473.63 |
Crystal system, space group | Monoclinic, P21 | Orthorhombic, P212121 |
Temperature (K) | 150 | 150 |
a, b, c (Å) | 13.07929 (17), 5.82873 (8), 16.3140 (2) | 6.3941 (2), 18.1440 (7), 22.6047 (9) |
α, β, γ (°) | 90, 107.3095 (6), 90 | 90, 90, 90 |
V (Å3) | 1187.37 (3) | 2622.47 (17) |
Z | 2 | 4 |
Radiation type | Cu Kα | Cu Kα |
µ (mm−1) | 0.58 | 0.65 |
Crystal size (mm) | 0.25 × 0.11 × 0.05 | 0.12 × 0.05 × 0.05 |
Data collection | ||
Diffractometer | Bruker SMART 6000 diffractometer | Bruker Microstar diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2008) | Multi-scan (SADABS; Sheldrick, 2008) |
Tmin, Tmax | 0.810, 0.971 | 0.787, 0.968 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 36176, 4334, 4159 | 43157, 4933, 4697 |
Rint | 0.038 | 0.052 |
(sin θ/λ)max (Å−1) | 0.619 | 0.608 |
Refinement | ||
R[F2 > 2σ(F2)], wR(F2), S | 0.040, 0.107, 1.07 | 0.037, 0.101, 1.06 |
No. of reflections | 4334 | 4933 |
No. of parameters | 279 | 312 |
No. of restraints | 1 | 0 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.18, −0.22 | 0.23, −0.14 |
Absolute structure | Flack (1983), 1733 Friedel pairs | Flack (1983), 2087 Friedel pairs |
Absolute structure parameter | 0.12 (18) | 0.06 (18) |
Computer programs: APEX2 [or SMART?] (Bruker, 2011), APEX2 (Bruker, 2011), SAINT (Bruker, 2011), XPREP (Bruker, 2008), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008), UdMX (Maris, 2004).
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17β-Hydroxysteroid dehydrogenase type 3 (17β-HSD3) is an enzyme that catalyses the reduction of 4-androstene-3,17-dione into androgen testosterone (Poirier, 2010; Mohler et al., 2007; Maltais et al., 2011). This latter steroid hormone, as well as its natural metabolite dehydrotestosterone, is known to stimulate the proliferation of prostate cancer cells; the Scheme shows the biosynthesis of the androgenic hormone testosterone and a representation of azalactones (I) and (III) and carbamates (II) and (IV) tested as inhibitors of 17β-HSD3 (Inh = inhibition) (Poirier, 2008). Since 17β-HSD3 contributes to the production of androgens in men, inhibiting this enzyme is an interesting strategy to block androgen biosynthesis and to treat prostate cancer. Androsterone (ADT) derivatives substituted at position C-3 [C3?] were previously reported as inhibitors of 17β-HSD3 and it was established that a hydrophobic group is required to obtain good inhibition of 17β-HSD3 (Maltais et al., 2002), a β-oriented group producing a better inhibition than the α-oriented group (Tchedam-Ngatcha et al., 2005).
In our synthetic search for inhibitors of 17β-HSD3, we recently focused on the preparation of new ADT derivatives having an extra azalactone or carbamate E ring. For a better understanding of the structure–activity relationship (SAR) of these new inhibitors, especially the side-chain orientation, we analyzed the structures of the representative compounds (I) and (II) (see Scheme and Fig. 1).
The two compounds show fixed conformations of their extended side chains; no disorder is apparent in the structure analyses. Packing diagrams with van der Waals radii give the impression that these structures are not very tightly packed, in agreement with the low densities [1.162 Mg m-3 in (I) and 1.200 Mg m-3 in (II)]. The packing appears to be efficient enough, however, to be linked to the appearance of just one conformation of the side chain in each case.
The correct enantiomers, already known from the starting materials, were checked against the absolute structure parameters (Flack, 1983). For compound (I), the absolute structure parameter was found to be 0.12 (18) for 1747 Friedel pairs (83% Friedel coverage). For compound (II), it was 0.06 (18) for 2090 (100%) Friedel pairs. These two values are better than might have been expected considering that the highest anomalous contribution comes from oxygen atoms (Flack & Bernardinelli, 2008). A Bayesian statistics analysis on Bijvoet differences was also performed using the program PLATON (Spek, 2009). The Hooft parameters obtained (Hooft et al., 2008), -0.04 (7) and -0.05 (6) for compounds (I) and (II), respectively, are also in very good agreement with the known molecular absolute configurations, and were perhaps influenced positively by the use of copper radiation. Probability levels of having a false attribution, P3(false), are essentially zero for both compounds.
The steroid six-membered A, B and C rings appear as the well known fused-ring system, all in chair conformation, while the five-membered D ring is in a slightly twisted envelope conformation in both azalactone (I) and carbamate (II) (Yan et al., 2009) (Fig. 2). The heterocyclic ring of (I) is a half-chair perpendicular to the steroid backbone, while the heterocyclic ring of carbamate (II) is almost planar [maximum deviation?] and is perpendicular to the steroidal plane (Fig. 3). These extra heterocyclic E rings provide a restricted orientation to the isobutyl group in the azalactones (I) and (III) (see Scheme). In carbamates (II) and (IV), the methyl pentanoate group has a higher degree of liberty due to the free rotation around the exocyclic bond to the BN atom. In azalactone (I), the hydrophobic side chain has a distal orientation with respect to the longitudinal axis of the four-ring steroid system (to the right in Fig. 4a). Consequently, the isobutyl group of the other isomer, the azalactone (III), would be oriented to the left in a similar drawing, or in other words in a proximal disposition to the centerline of the four-ring system. Since the present compound (I) is a less potent inhibitor than its stereoisomer (III), it appears that the side chain must be proximal (on the left side in Fig. 4a) for better enzyme inhibition. The isobutyl group would thus point toward a hypothetical hydrophobic pocket of 17β-HSD3, which was previously deduced from SAR studies (Tchedam-Ngatcha et al., 2005; Maltais et al., 2011) but not confirmed because this membrane enzyme was never crystallized. In the case of carbamates (II) (Fig. 4b) and (IV), the inhibitory activity is the same (55 and 58% of inhibition at 0.1 µM) for both compounds due to the free rotation of the methyl pentanoate group, which promotes interaction with a hydrophobic pocket of the enzyme.