Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S0108270100007770/fr1266sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S0108270100007770/fr1266IIIsup2.hkl |
CCDC reference: 150366
Compound (III) was prepared via the reaction of 2-thiophenecarbaldehyde, (I), with 4-aminophenol, (II), by modifying the methods of Kamonuah (1992) and Rao et al. (1985). The Schiff bases crystallized out on cooling from the hot reaction mixture and were recrystallized from ethanol several times for purification. Crystals of (III) suitable for X-ray diffraction were obtained by slow cooling of a saturated solution in hot tetrahydrofuran-chloroform (2:1) to room temperature.
The H atoms were located from difference maps and refined isotropically. The C—H bond distances range from 0.90 (3) to 1.01 (3) Å, while Uiso values for the H atoms are in the range 0.051 (5)–0.098 (10) Å2.
Data collection: CAD-4 EXPRESS (Enraf-Nonius, 1993); cell refinement: CAD-4 EXPRESS; data reduction: MolEN (Fair, 1990); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEPIII (Burnett & Johnson, 1996); software used to prepare material for publication: SHELXL97.
C11H9NOS | F(000) = 424 |
Mr = 203.25 | Dx = 1.362 Mg m−3 |
Monoclinic, P21/n | Cu Kα radiation, λ = 1.54180 Å |
Hall symbol: -P 2yn | Cell parameters from 25 reflections |
a = 6.4268 (3) Å | θ = 10.6–21.7° |
b = 14.3420 (12) Å | µ = 2.60 mm−1 |
c = 10.7559 (6) Å | T = 293 K |
β = 90.618 (4)° | Prismatic, light brown |
V = 991.35 (11) Å3 | 0.48 × 0.42 × 0.24 mm |
Z = 4 |
Enraf-Nonius CAD4 diffractometer | 1883 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.000 |
Graphite monochromator | θmax = 74.2°, θmin = 5.1° |
ω/2θ scans | h = 0→8 |
Absorption correction: empirical (using intensity measurements) via ψ-scans (north et al., 1968) ? | k = 0→17 |
Tmin = 0.417, Tmax = 0.536 | l = −13→13 |
2007 measured reflections | 3 standard reflections every 120 min |
2007 independent reflections | intensity decay: 1.9% |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.046 | All H-atom parameters refined |
wR(F2) = 0.125 | Calculated w = 1/[σ2(Fo2) + (0.0615P)2 + 0.431P] where P = (Fo2 + 2Fc2)/3 |
S = 1.05 | (Δ/σ)max = 0.001 |
2007 reflections | Δρmax = 0.21 e Å−3 |
164 parameters | Δρmin = −0.31 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 1997), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0159 (13) |
C11H9NOS | V = 991.35 (11) Å3 |
Mr = 203.25 | Z = 4 |
Monoclinic, P21/n | Cu Kα radiation |
a = 6.4268 (3) Å | µ = 2.60 mm−1 |
b = 14.3420 (12) Å | T = 293 K |
c = 10.7559 (6) Å | 0.48 × 0.42 × 0.24 mm |
β = 90.618 (4)° |
Enraf-Nonius CAD4 diffractometer | 1883 reflections with I > 2σ(I) |
Absorption correction: empirical (using intensity measurements) via ψ-scans (north et al., 1968) ? | Rint = 0.000 |
Tmin = 0.417, Tmax = 0.536 | 3 standard reflections every 120 min |
2007 measured reflections | intensity decay: 1.9% |
2007 independent reflections |
R[F2 > 2σ(F2)] = 0.046 | 0 restraints |
wR(F2) = 0.125 | All H-atom parameters refined |
S = 1.05 | Δρmax = 0.21 e Å−3 |
2007 reflections | Δρmin = −0.31 e Å−3 |
164 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.16541 (9) | 0.48263 (5) | 0.18228 (6) | 0.0720 (3) | |
O1 | 0.3861 (2) | 0.83954 (11) | 0.82412 (12) | 0.0542 (4) | |
N1 | 0.2798 (2) | 0.61136 (11) | 0.40847 (13) | 0.0448 (4) | |
C7 | 0.4266 (3) | 0.56235 (13) | 0.36208 (17) | 0.0465 (4) | |
C5 | 0.5399 (3) | 0.76283 (14) | 0.64723 (17) | 0.0465 (4) | |
C1 | 0.3207 (3) | 0.66810 (13) | 0.51437 (15) | 0.0431 (4) | |
C4 | 0.3717 (3) | 0.78340 (13) | 0.72272 (15) | 0.0440 (4) | |
C2 | 0.1526 (3) | 0.68971 (15) | 0.59036 (17) | 0.0477 (4) | |
C6 | 0.5145 (3) | 0.70600 (14) | 0.54417 (16) | 0.0456 (4) | |
C3 | 0.1774 (3) | 0.74579 (15) | 0.69330 (17) | 0.0490 (5) | |
C8 | 0.4002 (3) | 0.50377 (13) | 0.25355 (18) | 0.0484 (4) | |
C9 | 0.5551 (4) | 0.45560 (15) | 0.1954 (2) | 0.0579 (5) | |
C10 | 0.4834 (5) | 0.40239 (16) | 0.0946 (2) | 0.0689 (6) | |
C11 | 0.2779 (5) | 0.41009 (17) | 0.0769 (2) | 0.0733 (7) | |
H6 | 0.635 (3) | 0.6959 (16) | 0.4941 (19) | 0.055 (6)* | |
H9 | 0.688 (4) | 0.455 (2) | 0.224 (3) | 0.081 (8)* | |
H2 | 0.018 (4) | 0.6644 (16) | 0.572 (2) | 0.058 (6)* | |
H5 | 0.675 (4) | 0.7878 (17) | 0.667 (2) | 0.061 (6)* | |
H3 | 0.065 (4) | 0.7608 (17) | 0.744 (2) | 0.065 (7)* | |
H11 | 0.188 (4) | 0.3812 (19) | 0.014 (3) | 0.082 (8)* | |
H10 | 0.569 (5) | 0.362 (2) | 0.038 (3) | 0.098 (10)* | |
H7 | 0.569 (3) | 0.5626 (15) | 0.403 (2) | 0.051 (5)* | |
H1 | 0.517 (5) | 0.856 (2) | 0.841 (3) | 0.095 (10)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0591 (4) | 0.0767 (4) | 0.0800 (5) | −0.0045 (3) | −0.0087 (3) | −0.0239 (3) |
O1 | 0.0447 (7) | 0.0722 (9) | 0.0457 (7) | −0.0016 (6) | 0.0013 (5) | −0.0132 (6) |
N1 | 0.0446 (8) | 0.0490 (8) | 0.0408 (7) | −0.0013 (6) | −0.0008 (6) | 0.0004 (6) |
C7 | 0.0478 (10) | 0.0465 (9) | 0.0453 (9) | −0.0010 (8) | −0.0005 (7) | 0.0035 (7) |
C5 | 0.0383 (9) | 0.0565 (10) | 0.0446 (9) | −0.0022 (8) | 0.0014 (7) | 0.0001 (8) |
C1 | 0.0432 (9) | 0.0483 (9) | 0.0379 (8) | 0.0015 (7) | −0.0005 (7) | 0.0028 (7) |
C4 | 0.0424 (9) | 0.0515 (10) | 0.0380 (8) | 0.0010 (7) | −0.0005 (7) | 0.0009 (7) |
C2 | 0.0377 (9) | 0.0599 (11) | 0.0454 (9) | −0.0016 (8) | −0.0003 (7) | 0.0008 (8) |
C6 | 0.0399 (9) | 0.0550 (10) | 0.0420 (9) | 0.0007 (7) | 0.0032 (7) | −0.0005 (8) |
C3 | 0.0391 (9) | 0.0644 (12) | 0.0437 (9) | 0.0017 (8) | 0.0032 (7) | −0.0026 (8) |
C8 | 0.0546 (11) | 0.0436 (9) | 0.0470 (10) | −0.0008 (8) | 0.0023 (8) | 0.0020 (7) |
C9 | 0.0615 (13) | 0.0539 (11) | 0.0584 (12) | 0.0077 (9) | 0.0025 (10) | −0.0017 (9) |
C10 | 0.0922 (18) | 0.0533 (12) | 0.0614 (13) | 0.0068 (12) | 0.0079 (12) | −0.0096 (10) |
C11 | 0.0947 (19) | 0.0595 (13) | 0.0654 (14) | −0.0092 (13) | −0.0098 (13) | −0.0143 (11) |
S1—C11 | 1.705 (3) | C8—C9 | 1.369 (3) |
S1—C8 | 1.712 (2) | C9—C10 | 1.400 (3) |
O1—C4 | 1.358 (2) | C10—C11 | 1.336 (4) |
N1—C7 | 1.282 (2) | O1—H1 | 0.89 (3) |
N1—C1 | 1.422 (2) | C7—H7 | 1.01 (2) |
C7—C8 | 1.447 (3) | C5—H5 | 0.96 (2) |
C5—C6 | 1.384 (3) | C2—H2 | 0.95 (2) |
C5—C4 | 1.391 (2) | C6—H6 | 0.96 (2) |
C1—C6 | 1.393 (3) | C3—H3 | 0.93 (2) |
C1—C2 | 1.397 (2) | C9—H9 | 0.91 (3) |
C4—C3 | 1.393 (3) | C10—H10 | 1.00 (3) |
C2—C3 | 1.376 (3) | C11—H11 | 0.98 (3) |
C11—S1—C8 | 91.58 (12) | C10—C11—S1 | 112.41 (19) |
C7—N1—C1 | 119.69 (16) | C4—O1—H1 | 112 (2) |
N1—C7—C8 | 123.52 (18) | N1—C7—H7 | 119.7 (12) |
C6—C5—C4 | 120.43 (17) | C8—C7—H7 | 116.8 (12) |
C6—C1—C2 | 118.31 (17) | C6—C5—H5 | 119.5 (14) |
C6—C1—N1 | 124.37 (16) | C4—C5—H5 | 120.1 (14) |
C2—C1—N1 | 117.28 (16) | C3—C2—H2 | 118.8 (14) |
O1—C4—C5 | 123.21 (16) | C1—C2—H2 | 120.0 (14) |
O1—C4—C3 | 117.72 (16) | C5—C6—H6 | 116.7 (13) |
C5—C4—C3 | 119.07 (17) | C1—C6—H6 | 122.5 (13) |
C3—C2—C1 | 121.12 (17) | C2—C3—H3 | 121.5 (15) |
C5—C6—C1 | 120.77 (16) | C4—C3—H3 | 118.2 (15) |
C2—C3—C4 | 120.30 (17) | C8—C9—H9 | 122.4 (18) |
C9—C8—C7 | 125.62 (19) | C10—C9—H9 | 124.2 (18) |
C9—C8—S1 | 110.36 (16) | C11—C10—H10 | 120.6 (18) |
C7—C8—S1 | 124.00 (15) | C9—C10—H10 | 127.0 (18) |
C8—C9—C10 | 113.2 (2) | C10—C11—H11 | 129.9 (17) |
C11—C10—C9 | 112.4 (2) | S1—C11—H11 | 117.7 (17) |
Experimental details
Crystal data | |
Chemical formula | C11H9NOS |
Mr | 203.25 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 293 |
a, b, c (Å) | 6.4268 (3), 14.3420 (12), 10.7559 (6) |
β (°) | 90.618 (4) |
V (Å3) | 991.35 (11) |
Z | 4 |
Radiation type | Cu Kα |
µ (mm−1) | 2.60 |
Crystal size (mm) | 0.48 × 0.42 × 0.24 |
Data collection | |
Diffractometer | Enraf-Nonius CAD4 diffractometer |
Absorption correction | Empirical (using intensity measurements) via ψ-scans (North et al., 1968) |
Tmin, Tmax | 0.417, 0.536 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 2007, 2007, 1883 |
Rint | 0.000 |
(sin θ/λ)max (Å−1) | 0.624 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.046, 0.125, 1.05 |
No. of reflections | 2007 |
No. of parameters | 164 |
H-atom treatment | All H-atom parameters refined |
Δρmax, Δρmin (e Å−3) | 0.21, −0.31 |
Computer programs: CAD-4 EXPRESS (Enraf-Nonius, 1993), CAD-4 EXPRESS, MolEN (Fair, 1990), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), ORTEPIII (Burnett & Johnson, 1996), SHELXL97.
S1—C11 | 1.705 (3) | C7—C8 | 1.447 (3) |
S1—C8 | 1.712 (2) | C8—C9 | 1.369 (3) |
O1—C4 | 1.358 (2) | C9—C10 | 1.400 (3) |
N1—C7 | 1.282 (2) | C10—C11 | 1.336 (4) |
N1—C1 | 1.422 (2) | ||
C11—S1—C8 | 91.58 (12) | O1—C4—C5 | 123.21 (16) |
C7—N1—C1 | 119.69 (16) | O1—C4—C3 | 117.72 (16) |
N1—C7—C8 | 123.52 (18) | C9—C8—S1 | 110.36 (16) |
C6—C1—N1 | 124.37 (16) | C10—C11—S1 | 112.41 (19) |
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Most Schiff bases possess antibacterial, anticancer, antiinflammatory and antitoxic activities (Williams, 1972) and the sulfur-containing Schiff bases are particularly effective. Schiff bases have been extensively used as ligands in the field of coordination chemistry (Calligaris et al., 1972). Schiff-base compounds can be classified by their photochromic and thermochromic characteristics (Cohen et al., 1964; Moustakali et al., 1978). The intramolecular hydrogen bond between the O and N atoms plays an important role in the formation of metal complexes and Schiff-base compounds in the solid state via proton transfer from the hydroxy O atom to the imine N atom (Hadjoudis et al., 1987; Xu et al., 1994). The charge transport occurs through overlapping intramolecular π orbitals with proton transfer (Xu et al., 1994). In this paper we report the structure of 2-[(4-hydroxyphenyl)iminomethyl]thiophene, (III). \sch
An ORTEPIII (Burnett & Johnson, 1996) plot of compound (III) is shown in Fig.1. The C7=N1 bond length of 1.282 (2) Å is typical of a double bond, which is similar to the corresponding bond lengths in N-(2,4-dinitrophenyl)-N-methylhydrazone [1.279 (2) Å; Aygün et al., 1998], 2-salicylideneamino-4,5,6,7-tetrahydrobenzo[b]thiophene-3-carbonitrile [1.281 (2) Å; Elerman & Elmal/'i, 1998] and 4-ethyl-2-(2-hydroxynapthylmethylidene)amino-5-methyl-3-thiophene carbonitrile [1.293 (3) Å; Elerman et al., 1997].
The O1—C4 and N1—C1 bond distances are 1.358 (2) and 1.422 (2) Å, respectively, which are similar to the corresponding bond lengths in 4-ethyl-2-(2-hydroxynapthylmethylidene)amino-5-methyl-3-thiophene carbonitrile [1.357 (3) and 1.379 (4) Å, respectively; Elerman et al., 1997], N-(5-bromosalicylidene)-2-aminopyridine [1.348 (6) and 1.414 (6) Å, respectively; Moustakali et al., 1978] and 2,2'-azinodimethyldiphenol [1.364 (8) and 1.386 (9) Å, respectively; Xu et al., 1994]. The increase in the electron density of the aromatic ring due to the –OH electron donor side group has made the N1—C1 bond distance in (III) longer than the values given by Elerman et al. (1997) and Xu et al. (1994). Other relevant bond lengths and angles are listed in Table 1.
The molecule of (III) is not planar. The dihedral angle between the planes of the hydroxyphenyl and thiophene rings is 20.76 (10)°, and these two planes make angles of 26.4 (2) and 5.8 (2)°, respectively, with the plane of the central moiety (C1—N1—C7—C8). The hydroxy-O atom deviates by 0.016 (1) Å from the plane of the phenyl ring.
The crystal structure of (III) is stabilized by an O—H···N hydrogen bond and by C—H···O intermolecular interactions. The O1···N1i, N1i···H1 and O1—H1 bond distances are 2.770 (2), 1.89 (3) and 0.89 (3) Å, respectively, and the O1—H1···N1i angle is 169 (3)°. The C6···O1ii, O1ii···H6 and C6—H6 bond distances are 3.443 (2), 2.50 (2) and 0.96 (2) Å, respectively, and the C6—H6···O1ii angle is 166 (2)° [symmetry codes: (i) x + 1/2, 3/2 − y, z + 1/2; (ii) x + 1/2, 3/2 − y, z − 1/2]. The S···N distance is 3.135 (2) Å, which is shorter than the sum of the Van der Waals radii (3.35 Å; Bondi, 1964).