Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S0108270102008624/gg1119sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S0108270102008624/gg1119Isup2.hkl |
CCDC reference: 192991
A sample of (I) (m.p. 364–365 K) was prepared by condensation of 2-iodobenzaldehyde with 3-nitroaniline. Crystals suitable for single-crystal X-ray diffraction were grown by slow evaporation of a solution in ethanol.
Compound (I) crystallized in the triclinic system; space group P1 was assumed and confirmed by the analysis. H atoms were treated as riding atoms, with C—H = 0.95 Å.
Data collection: KappaCCD Server Software (Nonius, 1997); cell refinement: DENZO-SMN (Otwinowski & Minor, 1997); data reduction: DENZO-SMN; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: PLATON (Spek, 2002); software used to prepare material for publication: SHELXL97 and PRPKAPPA (Ferguson, 1999).
C13H9IN2O2 | Z = 2 |
Mr = 352.12 | F(000) = 340 |
Triclinic, P1 | Dx = 1.898 Mg m−3 |
Hall symbol: -P 1 | Melting point: 346 K |
a = 7.7405 (2) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 8.3297 (2) Å | Cell parameters from 2720 reflections |
c = 11.3317 (3) Å | θ = 3.1–27.5° |
α = 82.2570 (9)° | µ = 2.59 mm−1 |
β = 71.5605 (8)° | T = 120 K |
γ = 62.7543 (10)° | Plate, pale yellow |
V = 616.17 (3) Å3 | 0.35 × 0.15 × 0.03 mm |
Nonius KappaCCD diffractometer | 2720 independent reflections |
Radiation source: fine-focus sealed X-ray tube | 2596 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.064 |
ϕ scans, and ω scans with κ offsets | θmax = 27.5°, θmin = 3.1° |
Absorption correction: multi-scan (DENZO-SMN; Otwinowski & Minor, 1997) | h = −10→10 |
Tmin = 0.464, Tmax = 0.926 | k = −10→10 |
8201 measured reflections | l = −14→14 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.028 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.068 | H-atom parameters constrained |
S = 1.07 | w = 1/[σ2(Fo2) + (0.0278P)2 + 0.361P] where P = (Fo2 + 2Fc2)/3 |
2720 reflections | (Δ/σ)max < 0.001 |
163 parameters | Δρmax = 0.80 e Å−3 |
0 restraints | Δρmin = −1.60 e Å−3 |
C13H9IN2O2 | γ = 62.7543 (10)° |
Mr = 352.12 | V = 616.17 (3) Å3 |
Triclinic, P1 | Z = 2 |
a = 7.7405 (2) Å | Mo Kα radiation |
b = 8.3297 (2) Å | µ = 2.59 mm−1 |
c = 11.3317 (3) Å | T = 120 K |
α = 82.2570 (9)° | 0.35 × 0.15 × 0.03 mm |
β = 71.5605 (8)° |
Nonius KappaCCD diffractometer | 2720 independent reflections |
Absorption correction: multi-scan (DENZO-SMN; Otwinowski & Minor, 1997) | 2596 reflections with I > 2σ(I) |
Tmin = 0.464, Tmax = 0.926 | Rint = 0.064 |
8201 measured reflections |
R[F2 > 2σ(F2)] = 0.028 | 0 restraints |
wR(F2) = 0.068 | H-atom parameters constrained |
S = 1.07 | Δρmax = 0.80 e Å−3 |
2720 reflections | Δρmin = −1.60 e Å−3 |
163 parameters |
Experimental. The program DENZO-SMN (Otwinowski & Minor, 1997) uses a scaling algorithm [Fox, G. C. & Holmes, K. C. (1966). Acta Cryst. 20, 886–891] which effectively corrects for absorption effects. High-redundancy data were used in the scaling program, hence the `multi-scan' code word was used. |
Geometry. Mean-plane data from the final SHELXL97 refinement run:- |
x | y | z | Uiso*/Ueq | ||
C1 | 0.7422 (3) | 0.0695 (3) | 0.3077 (2) | 0.0164 (5) | |
N1 | 0.7310 (3) | 0.1564 (3) | 0.1922 (2) | 0.0183 (4) | |
C2 | 0.7499 (4) | −0.1018 (3) | 0.3290 (2) | 0.0165 (5) | |
C3 | 0.7636 (4) | −0.1796 (3) | 0.4437 (2) | 0.0172 (5) | |
N3 | 0.7716 (3) | −0.3600 (3) | 0.4652 (2) | 0.0225 (5) | |
O31 | 0.7780 (4) | −0.4380 (3) | 0.3785 (2) | 0.0371 (5) | |
O32 | 0.7710 (3) | −0.4248 (3) | 0.5691 (2) | 0.0322 (5) | |
C4 | 0.7705 (4) | −0.0952 (4) | 0.5378 (2) | 0.0214 (5) | |
C5 | 0.7635 (4) | 0.0749 (4) | 0.5149 (3) | 0.0235 (6) | |
C6 | 0.7519 (4) | 0.1560 (4) | 0.4008 (3) | 0.0201 (5) | |
C11 | 0.5803 (4) | 0.2370 (3) | 0.0246 (2) | 0.0163 (5) | |
C12 | 0.4086 (4) | 0.2768 (3) | −0.0131 (2) | 0.0153 (5) | |
I12 | 0.15723 (2) | 0.23901 (2) | 0.102073 (14) | 0.02085 (8) | |
C13 | 0.3940 (4) | 0.3507 (3) | −0.1292 (2) | 0.0185 (5) | |
C14 | 0.5492 (4) | 0.3842 (4) | −0.2092 (3) | 0.0201 (5) | |
C15 | 0.7211 (4) | 0.3454 (3) | −0.1738 (3) | 0.0205 (5) | |
C16 | 0.7343 (4) | 0.2734 (3) | −0.0579 (3) | 0.0196 (5) | |
C17 | 0.6006 (4) | 0.1579 (3) | 0.1460 (2) | 0.0168 (5) | |
H2 | 0.7458 | −0.1640 | 0.2662 | 0.020* | |
H4 | 0.7798 | −0.1519 | 0.6156 | 0.026* | |
H5 | 0.7666 | 0.1367 | 0.5782 | 0.028* | |
H6 | 0.7505 | 0.2715 | 0.3860 | 0.024* | |
H13 | 0.2767 | 0.3780 | −0.1534 | 0.022* | |
H14 | 0.5393 | 0.4339 | −0.2887 | 0.024* | |
H15 | 0.8285 | 0.3684 | −0.2289 | 0.025* | |
H16 | 0.8513 | 0.2482 | −0.0341 | 0.023* | |
H17 | 0.5131 | 0.1058 | 0.1918 | 0.020* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0097 (10) | 0.0194 (12) | 0.0192 (12) | −0.0061 (9) | −0.0044 (9) | 0.0025 (9) |
N1 | 0.0185 (10) | 0.0161 (11) | 0.0204 (11) | −0.0074 (8) | −0.0073 (9) | 0.0038 (8) |
C2 | 0.0144 (11) | 0.0187 (12) | 0.0176 (12) | −0.0071 (9) | −0.0068 (9) | 0.0007 (10) |
C3 | 0.0117 (11) | 0.0199 (12) | 0.0205 (13) | −0.0080 (9) | −0.0045 (9) | 0.0022 (10) |
N3 | 0.0178 (10) | 0.0233 (12) | 0.0257 (12) | −0.0092 (9) | −0.0090 (9) | 0.0093 (10) |
O31 | 0.0610 (15) | 0.0246 (11) | 0.0399 (13) | −0.0245 (10) | −0.0278 (12) | 0.0093 (10) |
O32 | 0.0323 (11) | 0.0358 (12) | 0.0282 (11) | −0.0182 (9) | −0.0104 (9) | 0.0176 (9) |
C4 | 0.0148 (11) | 0.0306 (14) | 0.0165 (12) | −0.0081 (10) | −0.0059 (10) | 0.0031 (10) |
C5 | 0.0180 (12) | 0.0295 (15) | 0.0226 (14) | −0.0077 (11) | −0.0071 (11) | −0.0058 (11) |
C6 | 0.0153 (12) | 0.0203 (13) | 0.0268 (14) | −0.0076 (10) | −0.0079 (11) | −0.0031 (11) |
C11 | 0.0151 (11) | 0.0127 (12) | 0.0196 (13) | −0.0046 (9) | −0.0056 (10) | −0.0007 (9) |
C12 | 0.0138 (11) | 0.0138 (12) | 0.0174 (12) | −0.0053 (9) | −0.0041 (9) | −0.0003 (9) |
I12 | 0.01522 (11) | 0.02461 (13) | 0.02394 (13) | −0.01003 (8) | −0.00601 (8) | 0.00203 (8) |
C13 | 0.0193 (12) | 0.0161 (12) | 0.0208 (13) | −0.0052 (10) | −0.0098 (10) | −0.0015 (10) |
C14 | 0.0233 (13) | 0.0183 (13) | 0.0158 (12) | −0.0067 (10) | −0.0060 (10) | 0.0007 (10) |
C15 | 0.0187 (12) | 0.0202 (13) | 0.0200 (13) | −0.0083 (10) | −0.0028 (10) | 0.0004 (10) |
C16 | 0.0159 (11) | 0.0201 (13) | 0.0227 (13) | −0.0079 (10) | −0.0065 (10) | 0.0025 (10) |
C17 | 0.0153 (11) | 0.0142 (12) | 0.0193 (12) | −0.0056 (9) | −0.0049 (9) | 0.0014 (9) |
C1—C2 | 1.392 (4) | C6—H6 | 0.9500 |
C1—C6 | 1.394 (4) | C11—C16 | 1.392 (4) |
C1—N1 | 1.415 (3) | C11—C12 | 1.406 (3) |
N1—C17 | 1.270 (3) | C11—C17 | 1.467 (4) |
C2—C3 | 1.385 (4) | C12—C13 | 1.391 (4) |
C2—H2 | 0.9500 | C12—I12 | 2.105 (2) |
C3—C4 | 1.381 (4) | C13—C14 | 1.376 (4) |
C3—N3 | 1.466 (3) | C13—H13 | 0.9500 |
N3—O31 | 1.224 (3) | C14—C15 | 1.394 (4) |
N3—O32 | 1.227 (3) | C14—H14 | 0.9500 |
C4—C5 | 1.384 (4) | C15—C16 | 1.382 (4) |
C4—H4 | 0.9500 | C15—H15 | 0.9500 |
C5—C6 | 1.385 (4) | C16—H16 | 0.9500 |
C5—H5 | 0.9500 | C17—H17 | 0.9500 |
C2—C1—C6 | 119.4 (2) | C16—C11—C12 | 117.9 (2) |
C2—C1—N1 | 121.6 (2) | C12—C11—C17 | 122.0 (2) |
C6—C1—N1 | 119.0 (2) | C16—C11—C17 | 120.2 (2) |
C17—N1—C1 | 117.4 (2) | C11—C12—I12 | 122.97 (18) |
C3—C2—C1 | 118.4 (2) | C13—C12—I12 | 116.26 (17) |
C3—C2—H2 | 120.8 | C13—C12—C11 | 120.7 (2) |
C1—C2—H2 | 120.8 | C14—C13—C12 | 120.1 (2) |
C4—C3—C2 | 123.0 (2) | C14—C13—H13 | 120.0 |
C4—C3—N3 | 118.9 (2) | C12—C13—H13 | 120.0 |
C2—C3—N3 | 118.0 (2) | C13—C14—C15 | 120.1 (2) |
O31—N3—O32 | 123.5 (2) | C13—C14—H14 | 119.9 |
O31—N3—C3 | 118.3 (2) | C15—C14—H14 | 119.9 |
O32—N3—C3 | 118.2 (2) | C16—C15—C14 | 119.6 (2) |
C3—C4—C5 | 117.8 (2) | C16—C15—H15 | 120.2 |
C3—C4—H4 | 121.1 | C14—C15—H15 | 120.2 |
C5—C4—H4 | 121.1 | C15—C16—C11 | 121.6 (2) |
C4—C5—C6 | 120.8 (2) | C15—C16—H16 | 119.2 |
C4—C5—H5 | 119.6 | C11—C16—H16 | 119.2 |
C6—C5—H5 | 119.6 | N1—C17—C11 | 122.4 (2) |
C5—C6—C1 | 120.6 (3) | N1—C17—H17 | 118.8 |
C5—C6—H6 | 119.7 | C11—C17—H17 | 118.8 |
C1—C6—H6 | 119.7 | ||
C1—N1—C17—C11 | −177.4 (2) | C17—N1—C1—C2 | 47.9 (4) |
N1—C17—C11—C12 | −164.7 (2) | C2—C3—N3—O31 | 4.3 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
C6—H6···O31i | 0.95 | 2.51 | 3.450 (4) | 169 |
C17—H17···I12 | 0.95 | 2.92 | 3.369 (2) | 110 |
Symmetry code: (i) x, y+1, z. |
Experimental details
Crystal data | |
Chemical formula | C13H9IN2O2 |
Mr | 352.12 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 120 |
a, b, c (Å) | 7.7405 (2), 8.3297 (2), 11.3317 (3) |
α, β, γ (°) | 82.2570 (9), 71.5605 (8), 62.7543 (10) |
V (Å3) | 616.17 (3) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 2.59 |
Crystal size (mm) | 0.35 × 0.15 × 0.03 |
Data collection | |
Diffractometer | Nonius KappaCCD diffractometer |
Absorption correction | Multi-scan (DENZO-SMN; Otwinowski & Minor, 1997) |
Tmin, Tmax | 0.464, 0.926 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 8201, 2720, 2596 |
Rint | 0.064 |
(sin θ/λ)max (Å−1) | 0.650 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.028, 0.068, 1.07 |
No. of reflections | 2720 |
No. of parameters | 163 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.80, −1.60 |
Computer programs: KappaCCD Server Software (Nonius, 1997), DENZO-SMN (Otwinowski & Minor, 1997), DENZO-SMN, SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), PLATON (Spek, 2002), SHELXL97 and PRPKAPPA (Ferguson, 1999).
C12—C11—C17 | 122.0 (2) | C11—C12—I12 | 122.97 (18) |
C16—C11—C17 | 120.2 (2) | C13—C12—I12 | 116.26 (17) |
C1—N1—C17—C11 | −177.4 (2) | C17—N1—C1—C2 | 47.9 (4) |
N1—C17—C11—C12 | −164.7 (2) | C2—C3—N3—O31 | 4.3 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
C6—H6···O31i | 0.95 | 2.51 | 3.450 (4) | 169 |
C17—H17···I12 | 0.95 | 2.92 | 3.369 (2) | 110 |
Symmetry code: (i) x, y+1, z. |
Subscribe to Acta Crystallographica Section C: Structural Chemistry
The full text of this article is available to subscribers to the journal.
- Information on subscribing
- Sample issue
- Purchase subscription
- Reduced-price subscriptions
- If you have already subscribed, you may need to register
We recently reported (Kelly et al., 2002) the molecular and supramolecular structures of a range of iodo-nitroarenesulfonamides, in which widely differing patterns of supramolecular aggregation reflect the subtle interplay of hard and soft (Braga et al., 1995) hydrogen bonds, iodo···nitro interactions and aromatic π···π stacking interactions. Here, we report the molecular and supramolecular structure of an analogous compound, (I), N-(2-iodobenzylidene)-3-nitroaniline, which has been specifically designed to preclude the formation of hard hydrogen bonds. In the event, there are, in fact, no I···O2N interactions in (I) and the supramolecular aggregation depends solely on a single, rather weak, C—H···O hydrogen bond and on π···π stacking interactions in which both arene rings participate. \sch
Within the molecule of (I) (Fig. 1), the central C1—N1—C17—C11 unit is effectively planar, as expected, and the overall molecular conformation can readily be defined in terms of the torsion angles involving this fragment (Table 1). The nitro group is almost coplanar with the adjacent arene ring. Although there is a short intramolecular contact between atoms H17 and I2 (Table 2), the exocyclic bond angles at atoms C11 and C12 (Table 1) suggest that this contact may be repulsive. Otherwise, the bond distances and angles show no unusual features; in particular, there is no evidence for any bond fixation within the rings.
The molecules of (I) are linked by the C—H···O hydrogen bond into a C(7) chain running parallel to the [010] direction. Atom C6 in the molecule at (x, y, z) acts as a hydrogen-bond donor to atom O31 in the molecule at (x, 1 + y, z) (Fig. 2), but the nitro atom O32 plays no role in the supramolecular aggregation. Two chains of this type, related to one another by inversion, pass through each unit cell.
The nitrated rings in the molecules at (x, y, z) and (1 - x, -y, 1 - z) form a π···π stacking interaction across the inversion centre at (1/2, 0, 1/2) (Fig. 3); the interplanar spacing and centroid separation are 3.449 (2) and 3.724 (2) Å, respectively, corresponding to a centroid offset of 1.404 (2) Å. Similarly, the iodinated rings in the molecules at (x, y, z) and (1 - x, 1 - y, -z) form a second π···π stacking interaction across the inversion centre at (1/2, 1/2, 0), where the interplanar spacing and centroid separation are 3.420 (2) and 3.594 (2) Å, respectively, corresponding to a centroid offset of 1.105 (2) Å. Propagation of these interactions by inversion thus generates a chain running parallel to the [011] direction (Fig. 3), and the combination of the hydrogen-bonded [010] chains and the π-stacked [011] chains generates sheets parallel to (100).
Table 2. Hydrogen-bond parameters and short intramolecular contacts (Å, °).