Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S2052519213013481/gp5065sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S2052519213013481/gp5065birkesup2.hkl | |
Structure factor file (CIF format) https://doi.org/10.1107/S2052519213013481/gp5065fichtesup3.hkl | |
Structure factor file (CIF format) https://doi.org/10.1107/S2052519213013481/gp5065buchesup4.hkl | |
Structure factor file (CIF format) https://doi.org/10.1107/S2052519213013481/gp5065kirschesup5.hkl | |
Structure factor file (CIF format) https://doi.org/10.1107/S2052519213013481/gp5065laerchesup6.hkl | |
Structure factor file (CIF format) https://doi.org/10.1107/S2052519213013481/gp5065judosup7.hkl | |
Zip compressed file https://doi.org/10.1107/S2052519213013481/gp5065sup8.zip |
CCDC references: 958014; 958015; 958016; 958017; 958018; 958019
Data collection: CrysAlis PRO, Oxford Diffraction Ltd., Version 1.171.35.19 (release 27-10-2011 CrysAlis171 .NET) (compiled Oct 27 2011,15:02:11) for birke, fichte, buche, kirsche, laerche; CrysAlis PRO, Oxford Diffraction Ltd., Version 1.171.35.21 (release 20-01-2012 CrysAlis171 .NET) (compiled Jan 23 2012,18:06:46) for judo. Cell refinement: CrysAlis PRO, Oxford Diffraction Ltd., Version 1.171.35.19 (release 27-10-2011 CrysAlis171 .NET) (compiled Oct 27 2011,15:02:11) for birke, fichte, buche, kirsche, laerche; CrysAlis PRO, Oxford Diffraction Ltd., Version 1.171.35.21 (release 20-01-2012 CrysAlis171 .NET) (compiled Jan 23 2012,18:06:46) for judo. Data reduction: CrysAlis PRO, Oxford Diffraction Ltd., Version 1.171.35.19 (release 27-10-2011 CrysAlis171 .NET) (compiled Oct 27 2011,15:02:11) for birke, fichte, buche, kirsche, laerche; CrysAlis PRO, Oxford Diffraction Ltd., Version 1.171.35.21 (release 20-01-2012 CrysAlis171 .NET) (compiled Jan 23 2012,18:06:46) for judo. For all compounds, program(s) used to solve structure: SHELXS97 (Sheldrick, 1990); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: Bruker XP; software used to prepare material for publication: SHELXL97.
C2H6N2S | Z = 4 |
Mr = 90.15 | F(000) = 192 |
Triclinic, P1 | Dx = 1.353 Mg m−3 |
a = 7.6615 (7) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 7.6945 (6) Å | Cell parameters from 8424 reflections |
c = 8.0283 (6) Å | θ = 2.7–30.8° |
α = 78.182 (7)° | µ = 0.54 mm−1 |
β = 73.785 (7)° | T = 100 K |
γ = 81.448 (7)° | Needle, colourless |
V = 442.71 (6) Å3 | 0.30 × 0.08 × 0.07 mm |
Oxford Diffraction Xcalibur, Eos diffractometer | 2543 independent reflections |
Radiation source: Enhance (Mo) X-ray Source | 2283 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.032 |
Detector resolution: 16.1419 pixels mm-1 | θmax = 30.0°, θmin = 2.7° |
ω–scan | h = −10→10 |
Absorption correction: multi-scan CrysAlis PRO, Oxford Diffraction Ltd., Version 1.171.35.19 (release 27-10-2011 CrysAlis171 .NET) (compiled Oct 27 2011,15:02:11) | k = −10→10 |
Tmin = 0.888, Tmax = 1.000 | l = −11→10 |
23416 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.023 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.059 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.10 | w = 1/[σ2(Fo2) + (0.0254P)2 + 0.1207P] where P = (Fo2 + 2Fc2)/3 |
2543 reflections | (Δ/σ)max = 0.001 |
117 parameters | Δρmax = 0.31 e Å−3 |
0 restraints | Δρmin = −0.28 e Å−3 |
C2H6N2S | γ = 81.448 (7)° |
Mr = 90.15 | V = 442.71 (6) Å3 |
Triclinic, P1 | Z = 4 |
a = 7.6615 (7) Å | Mo Kα radiation |
b = 7.6945 (6) Å | µ = 0.54 mm−1 |
c = 8.0283 (6) Å | T = 100 K |
α = 78.182 (7)° | 0.30 × 0.08 × 0.07 mm |
β = 73.785 (7)° |
Oxford Diffraction Xcalibur, Eos diffractometer | 2543 independent reflections |
Absorption correction: multi-scan CrysAlis PRO, Oxford Diffraction Ltd., Version 1.171.35.19 (release 27-10-2011 CrysAlis171 .NET) (compiled Oct 27 2011,15:02:11) | 2283 reflections with I > 2σ(I) |
Tmin = 0.888, Tmax = 1.000 | Rint = 0.032 |
23416 measured reflections |
R[F2 > 2σ(F2)] = 0.023 | 0 restraints |
wR(F2) = 0.059 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.10 | Δρmax = 0.31 e Å−3 |
2543 reflections | Δρmin = −0.28 e Å−3 |
117 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. NH H atoms were refined freely. The methyl groups were refined as idealized rigid groups allowed to rotate but not tip. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.80694 (3) | 0.72454 (3) | 0.06315 (3) | 0.01543 (7) | |
N1 | 0.69504 (13) | 0.65131 (12) | 0.41019 (12) | 0.01731 (18) | |
H01 | 0.637 (2) | 0.746 (2) | 0.3992 (19) | 0.026 (4)* | |
N3 | 0.87845 (14) | 0.42681 (12) | 0.27962 (13) | 0.01890 (19) | |
H02 | 0.850 (2) | 0.351 (2) | 0.374 (2) | 0.025 (4)* | |
H03 | 0.945 (2) | 0.393 (2) | 0.188 (2) | 0.024 (4)* | |
C2 | 0.79128 (13) | 0.59066 (13) | 0.26493 (13) | 0.01379 (18) | |
C11 | 0.68790 (17) | 0.55940 (15) | 0.58900 (14) | 0.0230 (2) | |
H11A | 0.6102 | 0.4614 | 0.6184 | 0.034* | |
H11B | 0.6372 | 0.6434 | 0.6711 | 0.034* | |
H11C | 0.8114 | 0.5115 | 0.5980 | 0.034* | |
S1' | 0.30721 (3) | 0.94926 (3) | 0.42276 (3) | 0.01560 (7) | |
N1' | 0.35908 (12) | 0.84136 (12) | 0.11870 (11) | 0.01543 (17) | |
H01' | 0.467 (2) | 0.8374 (19) | 0.1169 (19) | 0.024 (4)* | |
N3' | 0.05947 (12) | 0.89571 (13) | 0.26743 (12) | 0.01723 (18) | |
H02' | 0.021 (2) | 0.866 (2) | 0.184 (2) | 0.028 (4)* | |
H03' | −0.019 (2) | 0.9311 (19) | 0.353 (2) | 0.024 (4)* | |
C2' | 0.23673 (13) | 0.89313 (12) | 0.25712 (13) | 0.01321 (18) | |
C11' | 0.31622 (15) | 0.78088 (16) | −0.02406 (14) | 0.0204 (2) | |
H11D | 0.2594 | 0.6688 | 0.0211 | 0.031* | |
H11E | 0.4288 | 0.7617 | −0.1159 | 0.031* | |
H11F | 0.2316 | 0.8714 | −0.0737 | 0.031* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.01311 (12) | 0.01644 (12) | 0.01520 (12) | 0.00144 (9) | −0.00239 (9) | −0.00308 (9) |
N1 | 0.0182 (4) | 0.0138 (4) | 0.0168 (4) | 0.0005 (3) | 0.0007 (3) | −0.0041 (3) |
N3 | 0.0217 (5) | 0.0168 (4) | 0.0143 (4) | 0.0040 (3) | −0.0009 (4) | −0.0035 (3) |
C2 | 0.0099 (4) | 0.0153 (4) | 0.0169 (4) | −0.0027 (3) | −0.0022 (3) | −0.0048 (4) |
C11 | 0.0294 (6) | 0.0185 (5) | 0.0157 (5) | −0.0013 (4) | 0.0028 (4) | −0.0033 (4) |
S1' | 0.01314 (13) | 0.01735 (12) | 0.01736 (13) | −0.00040 (9) | −0.00304 (9) | −0.00732 (9) |
N1' | 0.0110 (4) | 0.0187 (4) | 0.0163 (4) | −0.0005 (3) | −0.0018 (3) | −0.0055 (3) |
N3' | 0.0111 (4) | 0.0240 (5) | 0.0172 (4) | −0.0010 (3) | −0.0011 (3) | −0.0088 (4) |
C2' | 0.0127 (4) | 0.0107 (4) | 0.0150 (4) | −0.0011 (3) | −0.0021 (3) | −0.0014 (3) |
C11' | 0.0176 (5) | 0.0266 (5) | 0.0180 (5) | −0.0009 (4) | −0.0017 (4) | −0.0111 (4) |
S1—C2 | 1.7160 (10) | N3—H03 | 0.833 (16) |
N1—C2 | 1.3273 (13) | C11—H11A | 0.9800 |
N1—C11 | 1.4546 (14) | C11—H11B | 0.9800 |
N3—C2 | 1.3350 (13) | C11—H11C | 0.9800 |
S1'—C2' | 1.7182 (10) | N1'—H01' | 0.819 (16) |
N1'—C2' | 1.3270 (13) | N3'—H02' | 0.878 (16) |
N1'—C11' | 1.4533 (13) | N3'—H03' | 0.838 (16) |
N3'—C2' | 1.3348 (13) | C11'—H11D | 0.9800 |
N1—H01 | 0.795 (16) | C11'—H11E | 0.9800 |
N3—H02 | 0.853 (15) | C11'—H11F | 0.9800 |
C2—N1—C11 | 125.21 (9) | H11A—C11—H11B | 109.5 |
N1—C2—N3 | 118.87 (9) | N1—C11—H11C | 109.5 |
N1—C2—S1 | 119.97 (8) | H11A—C11—H11C | 109.5 |
N3—C2—S1 | 121.14 (8) | H11B—C11—H11C | 109.5 |
C2'—N1'—C11' | 125.04 (9) | C2'—N1'—H01' | 117.3 (10) |
N1'—C2'—N3' | 118.97 (9) | C11'—N1'—H01' | 117.6 (10) |
N1'—C2'—S1' | 120.05 (8) | C2'—N3'—H02' | 122.0 (10) |
N3'—C2'—S1' | 120.95 (8) | C2'—N3'—H03' | 119.9 (10) |
C2—N1—H01 | 117.7 (11) | H02'—N3'—H03' | 118.0 (14) |
C11—N1—H01 | 117.0 (11) | N1'—C11'—H11D | 109.5 |
C2—N3—H02 | 120.9 (10) | N1'—C11'—H11E | 109.5 |
C2—N3—H03 | 117.8 (10) | H11D—C11'—H11E | 109.5 |
H02—N3—H03 | 120.0 (14) | N1'—C11'—H11F | 109.5 |
N1—C11—H11A | 109.5 | H11D—C11'—H11F | 109.5 |
N1—C11—H11B | 109.5 | H11E—C11'—H11F | 109.5 |
C11—N1—C2—N3 | 5.57 (16) | C11'—N1'—C2'—N3' | −1.86 (15) |
C11—N1—C2—S1 | −172.71 (8) | C11'—N1'—C2'—S1' | 176.23 (8) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H01···S1′ | 0.795 (16) | 2.748 (16) | 3.4636 (10) | 150.7 (14) |
N3—H02···S1′i | 0.853 (15) | 2.766 (15) | 3.5496 (11) | 153.6 (13) |
N3—H03···S1ii | 0.833 (16) | 2.571 (16) | 3.3930 (10) | 169.6 (13) |
N1′—H01′···S1 | 0.819 (16) | 2.564 (16) | 3.3426 (10) | 159.1 (13) |
N3′—H02′···S1iii | 0.878 (16) | 2.588 (16) | 3.4033 (10) | 154.9 (13) |
N3′—H03′···S1′iv | 0.838 (16) | 2.612 (16) | 3.4377 (10) | 168.7 (13) |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+2, −y+1, −z; (iii) x−1, y, z; (iv) −x, −y+2, −z+1. |
C3H8N2S | Dx = 1.324 Mg m−3 |
Mr = 104.17 | Mo Kα radiation, λ = 0.71073 Å |
Orthorhombic, Pbca | Cell parameters from 13412 reflections |
a = 6.15884 (15) Å | θ = 2.2–30.9° |
b = 11.5953 (3) Å | µ = 0.47 mm−1 |
c = 14.6390 (4) Å | T = 100 K |
V = 1045.42 (4) Å3 | Tablet, colourless |
Z = 8 | 0.20 × 0.20 × 0.12 mm |
F(000) = 448 |
Oxford Diffraction Xcalibur, Eos diffractometer | 1620 independent reflections |
Radiation source: Enhance (Mo) X-ray Source | 1433 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.041 |
Detector resolution: 16.1419 pixels mm-1 | θmax = 30.9°, θmin = 2.8° |
ω–scan | h = −8→8 |
Absorption correction: multi-scan CrysAlis PRO, Oxford Diffraction Ltd., Version 1.171.35.19 (release 27-10-2011 CrysAlis171 .NET) (compiled Oct 27 2011,15:02:11) | k = −16→16 |
Tmin = 0.977, Tmax = 1.000 | l = −20→20 |
47980 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.026 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.063 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.07 | w = 1/[σ2(Fo2) + (0.0271P)2 + 0.4173P] where P = (Fo2 + 2Fc2)/3 |
1620 reflections | (Δ/σ)max = 0.004 |
65 parameters | Δρmax = 0.36 e Å−3 |
0 restraints | Δρmin = −0.21 e Å−3 |
C3H8N2S | V = 1045.42 (4) Å3 |
Mr = 104.17 | Z = 8 |
Orthorhombic, Pbca | Mo Kα radiation |
a = 6.15884 (15) Å | µ = 0.47 mm−1 |
b = 11.5953 (3) Å | T = 100 K |
c = 14.6390 (4) Å | 0.20 × 0.20 × 0.12 mm |
Oxford Diffraction Xcalibur, Eos diffractometer | 1620 independent reflections |
Absorption correction: multi-scan CrysAlis PRO, Oxford Diffraction Ltd., Version 1.171.35.19 (release 27-10-2011 CrysAlis171 .NET) (compiled Oct 27 2011,15:02:11) | 1433 reflections with I > 2σ(I) |
Tmin = 0.977, Tmax = 1.000 | Rint = 0.041 |
47980 measured reflections |
R[F2 > 2σ(F2)] = 0.026 | 0 restraints |
wR(F2) = 0.063 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.07 | Δρmax = 0.36 e Å−3 |
1620 reflections | Δρmin = −0.21 e Å−3 |
65 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. NH H atoms were refined freely. The methyl groups were refined as idealized rigid groups allowed to rotate but not tip. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.86257 (4) | 0.342915 (19) | 0.560327 (16) | 0.01637 (8) | |
N1 | 0.50612 (13) | 0.42782 (7) | 0.64388 (5) | 0.01555 (16) | |
N3 | 0.73219 (16) | 0.55819 (7) | 0.57368 (6) | 0.01929 (18) | |
H02 | 0.843 (2) | 0.5724 (12) | 0.5403 (10) | 0.026 (4)* | |
H01 | 0.648 (2) | 0.6158 (15) | 0.5852 (11) | 0.033 (4)* | |
C2 | 0.68672 (15) | 0.44830 (7) | 0.59527 (6) | 0.01367 (17) | |
C11 | 0.43718 (17) | 0.31185 (8) | 0.66995 (7) | 0.01888 (19) | |
H11A | 0.5475 | 0.2559 | 0.6509 | 0.028* | |
H11B | 0.2990 | 0.2937 | 0.6400 | 0.028* | |
H11C | 0.4188 | 0.3081 | 0.7364 | 0.028* | |
C12 | 0.35777 (17) | 0.52175 (9) | 0.66800 (7) | 0.0209 (2) | |
H12A | 0.4311 | 0.5753 | 0.7096 | 0.031* | |
H12B | 0.2288 | 0.4899 | 0.6980 | 0.031* | |
H12C | 0.3142 | 0.5629 | 0.6125 | 0.031* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.01796 (13) | 0.01046 (12) | 0.02067 (13) | 0.00102 (8) | 0.00495 (8) | 0.00125 (8) |
N1 | 0.0166 (4) | 0.0137 (3) | 0.0164 (4) | 0.0008 (3) | 0.0026 (3) | 0.0003 (3) |
N3 | 0.0221 (4) | 0.0104 (4) | 0.0254 (4) | 0.0012 (3) | 0.0067 (4) | 0.0015 (3) |
C2 | 0.0168 (4) | 0.0119 (4) | 0.0123 (4) | 0.0001 (3) | −0.0012 (3) | 0.0001 (3) |
C11 | 0.0190 (5) | 0.0172 (4) | 0.0204 (5) | −0.0036 (4) | 0.0027 (4) | 0.0021 (3) |
C12 | 0.0207 (5) | 0.0209 (5) | 0.0211 (5) | 0.0060 (4) | 0.0042 (4) | −0.0004 (4) |
S1—C2 | 1.7111 (9) | C11—H11A | 0.9800 |
N1—C2 | 1.3416 (12) | C11—H11B | 0.9800 |
N1—C11 | 1.4608 (12) | C11—H11C | 0.9800 |
N1—C12 | 1.4649 (12) | C12—H12A | 0.9800 |
N3—C2 | 1.3423 (12) | C12—H12B | 0.9800 |
N3—H02 | 0.854 (15) | C12—H12C | 0.9800 |
N3—H01 | 0.861 (17) | ||
C2—N1—C11 | 122.85 (8) | H11A—C11—H11B | 109.5 |
C2—N1—C12 | 120.89 (8) | N1—C11—H11C | 109.5 |
C11—N1—C12 | 116.11 (8) | H11A—C11—H11C | 109.5 |
N1—C2—N3 | 117.77 (8) | H11B—C11—H11C | 109.5 |
N1—C2—S1 | 123.84 (7) | N1—C12—H12A | 109.5 |
N3—C2—S1 | 118.39 (7) | N1—C12—H12B | 109.5 |
C2—N3—H02 | 119.0 (10) | H12A—C12—H12B | 109.5 |
C2—N3—H01 | 124.4 (10) | N1—C12—H12C | 109.5 |
H02—N3—H01 | 116.2 (13) | H12A—C12—H12C | 109.5 |
N1—C11—H11A | 109.5 | H12B—C12—H12C | 109.5 |
N1—C11—H11B | 109.5 | ||
C11—N1—C2—N3 | 178.75 (9) | C11—N1—C2—S1 | −1.84 (13) |
C12—N1—C2—N3 | 3.34 (14) | C12—N1—C2—S1 | −177.25 (7) |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H02···S1i | 0.854 (15) | 2.535 (15) | 3.3752 (9) | 167.9 (13) |
N3—H01···S1ii | 0.861 (17) | 2.660 (17) | 3.3584 (9) | 139.1 (13) |
Symmetry codes: (i) −x+2, −y+1, −z+1; (ii) −x+3/2, y+1/2, z. |
C6H15N3OS | F(000) = 384 |
Mr = 177.27 | Dx = 1.274 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
a = 6.56953 (19) Å | Cell parameters from 8511 reflections |
b = 8.7346 (3) Å | θ = 2.3–30.8° |
c = 16.2322 (5) Å | µ = 0.30 mm−1 |
β = 96.964 (3)° | T = 100 K |
V = 924.57 (5) Å3 | Block, colourless |
Z = 4 | 0.60 × 0.30 × 0.20 mm |
Oxford Diffraction Xcalibur, Eos diffractometer | 2766 independent reflections |
Radiation source: Enhance (Mo) X-ray Source | 2481 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.023 |
Detector resolution: 16.1419 pixels mm-1 | θmax = 30.8°, θmin = 2.5° |
ω–scan | h = −9→9 |
Absorption correction: multi-scan CrysAlis PRO, Oxford Diffraction Ltd., Version 1.171.35.19 (release 27-10-2011 CrysAlis171 .NET) (compiled Oct 27 2011,15:02:11) | k = −12→12 |
Tmin = 0.930, Tmax = 1.000 | l = −22→23 |
24602 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.025 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.065 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0279P)2 + 0.2877P] where P = (Fo2 + 2Fc2)/3 |
2766 reflections | (Δ/σ)max = 0.001 |
117 parameters | Δρmax = 0.42 e Å−3 |
0 restraints | Δρmin = −0.22 e Å−3 |
C6H15N3OS | V = 924.57 (5) Å3 |
Mr = 177.27 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 6.56953 (19) Å | µ = 0.30 mm−1 |
b = 8.7346 (3) Å | T = 100 K |
c = 16.2322 (5) Å | 0.60 × 0.30 × 0.20 mm |
β = 96.964 (3)° |
Oxford Diffraction Xcalibur, Eos diffractometer | 2766 independent reflections |
Absorption correction: multi-scan CrysAlis PRO, Oxford Diffraction Ltd., Version 1.171.35.19 (release 27-10-2011 CrysAlis171 .NET) (compiled Oct 27 2011,15:02:11) | 2481 reflections with I > 2σ(I) |
Tmin = 0.930, Tmax = 1.000 | Rint = 0.023 |
24602 measured reflections |
R[F2 > 2σ(F2)] = 0.025 | 0 restraints |
wR(F2) = 0.065 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | Δρmax = 0.42 e Å−3 |
2766 reflections | Δρmin = −0.22 e Å−3 |
117 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. The NH hydrogen were refined freely. The methyl groups were refined as idealized rigid groups allowed to rotate but not tip. Other H atoms were included using a riding model starting from calculated positions. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.59279 (3) | 0.25150 (2) | 0.516867 (12) | 0.01403 (6) | |
N1 | 0.26108 (10) | 0.11300 (8) | 0.44283 (4) | 0.01374 (13) | |
H01 | 0.3227 (18) | 0.0341 (14) | 0.4585 (7) | 0.022 (3)* | |
C2 | 0.35593 (12) | 0.24655 (8) | 0.45909 (5) | 0.01128 (14) | |
N3 | 0.26259 (11) | 0.37463 (8) | 0.43036 (4) | 0.01434 (13) | |
H02 | 0.147 (2) | 0.3738 (15) | 0.3978 (8) | 0.030 (3)* | |
H03 | 0.3197 (18) | 0.4598 (14) | 0.4437 (7) | 0.023 (3)* | |
C11 | 0.05684 (12) | 0.09654 (10) | 0.39797 (5) | 0.01780 (16) | |
H11A | −0.0416 | 0.1542 | 0.4266 | 0.027* | |
H11B | 0.0183 | −0.0119 | 0.3956 | 0.027* | |
H11C | 0.0561 | 0.1362 | 0.3415 | 0.027* | |
O1 | −0.05655 (10) | 0.75767 (7) | 0.29741 (4) | 0.01797 (13) | |
C3 | 0.08424 (13) | 0.66044 (10) | 0.26173 (5) | 0.01771 (16) | |
H3A | 0.2034 | 0.6386 | 0.3035 | 0.021* | |
H3B | 0.1350 | 0.7133 | 0.2143 | 0.021* | |
C4 | −0.01776 (14) | 0.51139 (10) | 0.23232 (5) | 0.01901 (17) | |
H4A | −0.1326 | 0.5321 | 0.1884 | 0.023* | |
H4B | 0.0823 | 0.4445 | 0.2088 | 0.023* | |
N4 | −0.09532 (11) | 0.43452 (8) | 0.30303 (5) | 0.01755 (15) | |
H04 | −0.162 (2) | 0.3584 (16) | 0.2865 (8) | 0.032 (3)* | |
C5 | −0.23971 (13) | 0.53543 (10) | 0.33980 (5) | 0.01836 (17) | |
H5A | −0.2881 | 0.4847 | 0.3884 | 0.022* | |
H5B | −0.3602 | 0.5566 | 0.2986 | 0.022* | |
C6 | −0.13237 (13) | 0.68363 (10) | 0.36638 (5) | 0.01742 (16) | |
H6A | −0.2294 | 0.7526 | 0.3903 | 0.021* | |
H6B | −0.0168 | 0.6623 | 0.4099 | 0.021* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.01197 (10) | 0.01029 (10) | 0.01869 (11) | 0.00015 (6) | −0.00278 (7) | 0.00048 (6) |
N1 | 0.0134 (3) | 0.0088 (3) | 0.0180 (3) | 0.0003 (2) | −0.0021 (2) | 0.0004 (2) |
C2 | 0.0121 (3) | 0.0111 (3) | 0.0107 (3) | 0.0005 (2) | 0.0019 (3) | −0.0006 (2) |
N3 | 0.0145 (3) | 0.0093 (3) | 0.0179 (3) | 0.0000 (2) | −0.0034 (2) | 0.0003 (2) |
C11 | 0.0142 (3) | 0.0133 (4) | 0.0245 (4) | −0.0019 (3) | −0.0034 (3) | −0.0007 (3) |
O1 | 0.0239 (3) | 0.0129 (3) | 0.0180 (3) | 0.0028 (2) | 0.0061 (2) | 0.0027 (2) |
C3 | 0.0189 (4) | 0.0182 (4) | 0.0169 (4) | 0.0009 (3) | 0.0057 (3) | 0.0016 (3) |
C4 | 0.0225 (4) | 0.0187 (4) | 0.0153 (4) | 0.0030 (3) | 0.0003 (3) | −0.0023 (3) |
N4 | 0.0191 (3) | 0.0128 (3) | 0.0195 (3) | −0.0024 (3) | −0.0029 (3) | −0.0003 (3) |
C5 | 0.0149 (4) | 0.0215 (4) | 0.0183 (4) | −0.0017 (3) | 0.0007 (3) | 0.0034 (3) |
C6 | 0.0200 (4) | 0.0185 (4) | 0.0143 (3) | 0.0015 (3) | 0.0041 (3) | 0.0004 (3) |
S1—C2 | 1.7172 (8) | C11—H11A | 0.9800 |
N1—C2 | 1.3337 (10) | C11—H11B | 0.9800 |
N1—C11 | 1.4541 (10) | C11—H11C | 0.9800 |
C2—N3 | 1.3326 (10) | C3—H3A | 0.9900 |
O1—C3 | 1.4290 (10) | C3—H3B | 0.9900 |
O1—C6 | 1.4335 (10) | C4—H4A | 0.9900 |
C3—C4 | 1.5147 (12) | C4—H4B | 0.9900 |
C4—N4 | 1.4729 (11) | N4—H04 | 0.822 (14) |
N4—C5 | 1.4732 (11) | C5—H5A | 0.9900 |
C5—C6 | 1.5117 (12) | C5—H5B | 0.9900 |
N1—H01 | 0.824 (12) | C6—H6A | 0.9900 |
N3—H02 | 0.872 (13) | C6—H6B | 0.9900 |
N3—H03 | 0.850 (13) | ||
C2—N1—C11 | 124.48 (7) | C4—C3—H3A | 109.5 |
N3—C2—N1 | 118.74 (7) | O1—C3—H3B | 109.5 |
N3—C2—S1 | 121.20 (6) | C4—C3—H3B | 109.5 |
N1—C2—S1 | 120.05 (6) | H3A—C3—H3B | 108.1 |
C3—O1—C6 | 110.59 (6) | N4—C4—H4A | 109.9 |
O1—C3—C4 | 110.81 (7) | C3—C4—H4A | 109.9 |
N4—C4—C3 | 109.13 (7) | N4—C4—H4B | 109.9 |
C4—N4—C5 | 110.09 (7) | C3—C4—H4B | 109.9 |
N4—C5—C6 | 109.09 (7) | H4A—C4—H4B | 108.3 |
O1—C6—C5 | 110.95 (7) | C4—N4—H04 | 109.5 (9) |
C2—N1—H01 | 118.1 (8) | C5—N4—H04 | 105.9 (9) |
C11—N1—H01 | 117.4 (8) | N4—C5—H5A | 109.9 |
C2—N3—H02 | 122.4 (9) | C6—C5—H5A | 109.9 |
C2—N3—H03 | 118.4 (8) | N4—C5—H5B | 109.9 |
H02—N3—H03 | 119.2 (12) | C6—C5—H5B | 109.9 |
N1—C11—H11A | 109.5 | H5A—C5—H5B | 108.3 |
N1—C11—H11B | 109.5 | O1—C6—H6A | 109.4 |
H11A—C11—H11B | 109.5 | C5—C6—H6A | 109.4 |
N1—C11—H11C | 109.5 | O1—C6—H6B | 109.4 |
H11A—C11—H11C | 109.5 | C5—C6—H6B | 109.4 |
H11B—C11—H11C | 109.5 | H6A—C6—H6B | 108.0 |
O1—C3—H3A | 109.5 | ||
C11—N1—C2—N3 | −2.40 (12) | C3—C4—N4—C5 | 57.82 (9) |
C11—N1—C2—S1 | 177.00 (6) | C4—N4—C5—C6 | −57.74 (9) |
C6—O1—C3—C4 | 59.15 (9) | C3—O1—C6—C5 | −59.18 (9) |
O1—C3—C4—N4 | −58.36 (9) | N4—C5—C6—O1 | 58.19 (9) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H01···S1i | 0.824 (12) | 2.576 (13) | 3.3665 (7) | 161.2 (11) |
N3—H02···N4 | 0.872 (13) | 2.142 (13) | 2.9826 (10) | 162.0 (12) |
N3—H03···S1ii | 0.850 (13) | 2.647 (13) | 3.4790 (7) | 166.5 (10) |
N4—H04···O1iii | 0.822 (14) | 2.333 (14) | 3.0611 (10) | 147.9 (12) |
Symmetry codes: (i) −x+1, −y, −z+1; (ii) −x+1, −y+1, −z+1; (iii) −x−1/2, y−1/2, −z+1/2. |
C5H12N2OS | F(000) = 320 |
Mr = 148.23 | Dx = 1.295 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
a = 6.4979 (2) Å | Cell parameters from 7968 reflections |
b = 7.0116 (3) Å | θ = 2.4–30.8° |
c = 16.7097 (6) Å | µ = 0.35 mm−1 |
β = 92.982 (4)° | T = 100 K |
V = 760.27 (5) Å3 | Tablet, colourless |
Z = 4 | 0.40 × 0.34 × 0.07 mm |
Oxford Diffraction Xcalibur, Eos diffractometer | 2295 independent reflections |
Radiation source: Enhance (Mo) X-ray Source | 2020 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.037 |
Detector resolution: 16.1419 pixels mm-1 | θmax = 30.8°, θmin = 2.4° |
ω–scan | h = −9→9 |
Absorption correction: multi-scan CrysAlis PRO, Oxford Diffraction Ltd., Version 1.171.35.19 (release 27-10-2011 CrysAlis171 .NET) (compiled Oct 27 2011,15:02:11) | k = −9→9 |
Tmin = 0.899, Tmax = 1.000 | l = −23→24 |
26635 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.030 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.075 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.08 | w = 1/[σ2(Fo2) + (0.0335P)2 + 0.3101P] where P = (Fo2 + 2Fc2)/3 |
2295 reflections | (Δ/σ)max = 0.001 |
92 parameters | Δρmax = 0.37 e Å−3 |
0 restraints | Δρmin = −0.34 e Å−3 |
C5H12N2OS | V = 760.27 (5) Å3 |
Mr = 148.23 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 6.4979 (2) Å | µ = 0.35 mm−1 |
b = 7.0116 (3) Å | T = 100 K |
c = 16.7097 (6) Å | 0.40 × 0.34 × 0.07 mm |
β = 92.982 (4)° |
Oxford Diffraction Xcalibur, Eos diffractometer | 2295 independent reflections |
Absorption correction: multi-scan CrysAlis PRO, Oxford Diffraction Ltd., Version 1.171.35.19 (release 27-10-2011 CrysAlis171 .NET) (compiled Oct 27 2011,15:02:11) | 2020 reflections with I > 2σ(I) |
Tmin = 0.899, Tmax = 1.000 | Rint = 0.037 |
26635 measured reflections |
R[F2 > 2σ(F2)] = 0.030 | 0 restraints |
wR(F2) = 0.075 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.08 | Δρmax = 0.37 e Å−3 |
2295 reflections | Δρmin = −0.34 e Å−3 |
92 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. The NH hydrogen were refined freely. The methyl groups were refined as idealized rigid groups allowed to rotate but not tip. Other H atoms were included using a riding model starting from calculated positions. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.59561 (4) | 0.36220 (4) | 0.114934 (15) | 0.01612 (8) | |
N3 | 0.28298 (16) | 0.59360 (15) | 0.07887 (6) | 0.0190 (2) | |
H02 | 0.334 (3) | 0.600 (2) | 0.0319 (10) | 0.029 (4)* | |
H01 | 0.184 (3) | 0.665 (2) | 0.0864 (9) | 0.026 (4)* | |
N1 | 0.29207 (13) | 0.47557 (13) | 0.20694 (5) | 0.01396 (17) | |
C2 | 0.37683 (15) | 0.48453 (14) | 0.13565 (6) | 0.01304 (19) | |
C11 | 0.38771 (18) | 0.36980 (17) | 0.27453 (7) | 0.0199 (2) | |
H11A | 0.3071 | 0.2546 | 0.2840 | 0.030* | |
H11B | 0.3917 | 0.4501 | 0.3226 | 0.030* | |
H11C | 0.5284 | 0.3339 | 0.2623 | 0.030* | |
C12 | 0.10138 (16) | 0.57891 (16) | 0.22121 (7) | 0.0168 (2) | |
H12A | 0.1249 | 0.7162 | 0.2158 | 0.025* | |
H12B | 0.0589 | 0.5512 | 0.2754 | 0.025* | |
H12C | −0.0072 | 0.5384 | 0.1820 | 0.025* | |
O1 | −0.01188 (12) | 0.91701 (11) | 0.07707 (5) | 0.01708 (16) | |
C4 | 0.09944 (17) | 1.09107 (16) | 0.06551 (6) | 0.0178 (2) | |
H4A | 0.2166 | 1.0993 | 0.1057 | 0.021* | |
H4B | 0.0076 | 1.2013 | 0.0736 | 0.021* | |
C3 | −0.17944 (16) | 0.90051 (16) | 0.01794 (6) | 0.0172 (2) | |
H3A | −0.2788 | 1.0055 | 0.0248 | 0.021* | |
H3B | −0.2523 | 0.7782 | 0.0252 | 0.021* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.01565 (13) | 0.01862 (14) | 0.01421 (13) | 0.00477 (9) | 0.00191 (9) | −0.00031 (9) |
N3 | 0.0207 (5) | 0.0236 (5) | 0.0130 (4) | 0.0094 (4) | 0.0032 (3) | 0.0026 (4) |
N1 | 0.0154 (4) | 0.0142 (4) | 0.0125 (4) | 0.0022 (3) | 0.0018 (3) | 0.0006 (3) |
C2 | 0.0140 (4) | 0.0117 (4) | 0.0134 (4) | −0.0003 (3) | 0.0004 (3) | −0.0020 (3) |
C11 | 0.0230 (5) | 0.0219 (5) | 0.0152 (5) | 0.0063 (4) | 0.0034 (4) | 0.0051 (4) |
C12 | 0.0146 (5) | 0.0195 (5) | 0.0165 (5) | 0.0022 (4) | 0.0034 (4) | −0.0005 (4) |
O1 | 0.0185 (4) | 0.0174 (4) | 0.0153 (4) | 0.0001 (3) | 0.0002 (3) | 0.0018 (3) |
C4 | 0.0191 (5) | 0.0186 (5) | 0.0157 (5) | −0.0016 (4) | 0.0005 (4) | −0.0026 (4) |
C3 | 0.0153 (5) | 0.0185 (5) | 0.0179 (5) | −0.0007 (4) | 0.0017 (4) | −0.0006 (4) |
S1—C2 | 1.7111 (10) | C11—H11A | 0.9800 |
N3—C2 | 1.3405 (14) | C11—H11B | 0.9800 |
N1—C2 | 1.3396 (13) | C11—H11C | 0.9800 |
N1—C11 | 1.4624 (14) | C12—H12A | 0.9800 |
N1—C12 | 1.4656 (13) | C12—H12B | 0.9800 |
O1—C3 | 1.4364 (13) | C12—H12C | 0.9800 |
O1—C4 | 1.4369 (13) | C4—H4A | 0.9900 |
C4—C3i | 1.5143 (15) | C4—H4B | 0.9900 |
C3—C4i | 1.5143 (15) | C3—H3A | 0.9900 |
N3—H02 | 0.868 (17) | C3—H3B | 0.9900 |
N3—H01 | 0.832 (17) | ||
C2—N1—C11 | 122.18 (9) | H11B—C11—H11C | 109.5 |
C2—N1—C12 | 120.77 (9) | N1—C12—H12A | 109.5 |
C11—N1—C12 | 117.00 (8) | N1—C12—H12B | 109.5 |
N1—C2—N3 | 117.60 (9) | H12A—C12—H12B | 109.5 |
N1—C2—S1 | 122.74 (8) | N1—C12—H12C | 109.5 |
N3—C2—S1 | 119.66 (8) | H12A—C12—H12C | 109.5 |
C3—O1—C4 | 110.17 (8) | H12B—C12—H12C | 109.5 |
O1—C4—C3i | 110.87 (9) | O1—C4—H4A | 109.5 |
O1—C3—C4i | 110.24 (9) | C3i—C4—H4A | 109.5 |
C2—N3—H02 | 119.3 (11) | O1—C4—H4B | 109.5 |
C2—N3—H01 | 124.4 (11) | C3i—C4—H4B | 109.5 |
H02—N3—H01 | 116.1 (15) | H4A—C4—H4B | 108.1 |
N1—C11—H11A | 109.5 | O1—C3—H3A | 109.6 |
N1—C11—H11B | 109.5 | C4i—C3—H3A | 109.6 |
H11A—C11—H11B | 109.5 | O1—C3—H3B | 109.6 |
N1—C11—H11C | 109.5 | C4i—C3—H3B | 109.6 |
H11A—C11—H11C | 109.5 | H3A—C3—H3B | 108.1 |
C11—N1—C2—N3 | −176.46 (10) | C12—N1—C2—S1 | −178.35 (8) |
C12—N1—C2—N3 | 1.16 (15) | C3—O1—C4—C3i | −57.69 (12) |
C11—N1—C2—S1 | 4.04 (15) | C4—O1—C3—C4i | 57.32 (12) |
Symmetry code: (i) −x, −y+2, −z. |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H02···S1ii | 0.868 (17) | 2.533 (17) | 3.3870 (10) | 167.9 (14) |
N3—H01···O1 | 0.832 (17) | 2.177 (17) | 2.9678 (13) | 158.9 (15) |
Symmetry code: (ii) −x+1, −y+1, −z. |
C5H12N2OS | Z = 2 |
Mr = 148.23 | F(000) = 160 |
Triclinic, P1 | Dx = 1.275 Mg m−3 |
a = 6.8470 (4) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 7.0982 (4) Å | Cell parameters from 9890 reflections |
c = 8.6412 (3) Å | θ = 2.6–30.8° |
α = 106.676 (5)° | µ = 0.35 mm−1 |
β = 105.448 (5)° | T = 100 K |
γ = 90.679 (4)° | Irregular, colourless |
V = 386.00 (3) Å3 | 0.40 × 0.40 × 0.30 mm |
Oxford Diffraction Xcalibur, Eos diffractometer | 2261 independent reflections |
Radiation source: Enhance (Mo) X-ray Source | 2152 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.021 |
Detector resolution: 16.1419 pixels mm-1 | θmax = 30.8°, θmin = 2.6° |
ω–scan | h = −9→9 |
Absorption correction: multi-scan CrysAlis PRO, Oxford Diffraction Ltd., Version 1.171.35.19 (release 27-10-2011 CrysAlis171 .NET) (compiled Oct 27 2011,15:02:11) | k = −10→10 |
Tmin = 0.963, Tmax = 1.000 | l = −12→12 |
19849 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.023 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.060 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0286P)2 + 0.1049P] where P = (Fo2 + 2Fc2)/3 |
2261 reflections | (Δ/σ)max = 0.001 |
92 parameters | Δρmax = 0.41 e Å−3 |
0 restraints | Δρmin = −0.19 e Å−3 |
C5H12N2OS | γ = 90.679 (4)° |
Mr = 148.23 | V = 386.00 (3) Å3 |
Triclinic, P1 | Z = 2 |
a = 6.8470 (4) Å | Mo Kα radiation |
b = 7.0982 (4) Å | µ = 0.35 mm−1 |
c = 8.6412 (3) Å | T = 100 K |
α = 106.676 (5)° | 0.40 × 0.40 × 0.30 mm |
β = 105.448 (5)° |
Oxford Diffraction Xcalibur, Eos diffractometer | 2261 independent reflections |
Absorption correction: multi-scan CrysAlis PRO, Oxford Diffraction Ltd., Version 1.171.35.19 (release 27-10-2011 CrysAlis171 .NET) (compiled Oct 27 2011,15:02:11) | 2152 reflections with I > 2σ(I) |
Tmin = 0.963, Tmax = 1.000 | Rint = 0.021 |
19849 measured reflections |
R[F2 > 2σ(F2)] = 0.023 | 0 restraints |
wR(F2) = 0.060 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | Δρmax = 0.41 e Å−3 |
2261 reflections | Δρmin = −0.19 e Å−3 |
92 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. The NH hydrogen were refined freely. The methyl groups were refined as idealized rigid groups allowed to rotate but not tip. Other H atoms were included using a riding model starting from calculated positions. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.79400 (3) | 0.65322 (3) | 0.83621 (2) | 0.01647 (7) | |
N1 | 0.73593 (10) | 0.32910 (10) | 0.91781 (9) | 0.01514 (13) | |
H01 | 0.858 (2) | 0.3589 (18) | 0.9756 (15) | 0.023 (3)* | |
C11 | 0.62755 (12) | 0.16044 (12) | 0.93232 (11) | 0.01757 (15) | |
H11A | 0.5127 | 0.2041 | 0.9767 | 0.026* | |
H11B | 0.7201 | 0.1010 | 1.0089 | 0.026* | |
H11C | 0.5769 | 0.0625 | 0.8211 | 0.026* | |
C2 | 0.65055 (11) | 0.45281 (11) | 0.83380 (9) | 0.01311 (14) | |
N3 | 0.45272 (10) | 0.41150 (10) | 0.74971 (9) | 0.01643 (14) | |
H03 | 0.3923 (18) | 0.3048 (19) | 0.7456 (15) | 0.022 (3)* | |
C31 | 0.33183 (13) | 0.53097 (13) | 0.65536 (11) | 0.02079 (17) | |
H31A | 0.3998 | 0.6652 | 0.6934 | 0.031* | |
H31B | 0.1968 | 0.5359 | 0.6741 | 0.031* | |
H31C | 0.3177 | 0.4722 | 0.5351 | 0.031* | |
O1 | 0.19088 (9) | 0.03915 (10) | 0.62293 (8) | 0.02009 (13) | |
C3 | 0.17228 (13) | −0.05756 (15) | 0.44879 (11) | 0.02394 (18) | |
H3A | 0.1566 | −0.2025 | 0.4267 | 0.029* | |
H3B | 0.2976 | −0.0235 | 0.4221 | 0.029* | |
C4 | 0.00908 (13) | −0.00422 (13) | 0.66256 (11) | 0.01956 (16) | |
H4A | 0.0218 | 0.0667 | 0.7821 | 0.023* | |
H4B | −0.0109 | −0.1477 | 0.6463 | 0.023* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.01465 (10) | 0.01487 (10) | 0.01981 (11) | −0.00181 (7) | 0.00210 (7) | 0.00777 (7) |
N1 | 0.0116 (3) | 0.0145 (3) | 0.0192 (3) | −0.0004 (2) | 0.0019 (2) | 0.0071 (2) |
C11 | 0.0169 (3) | 0.0148 (3) | 0.0221 (4) | −0.0006 (3) | 0.0046 (3) | 0.0082 (3) |
C2 | 0.0134 (3) | 0.0126 (3) | 0.0127 (3) | 0.0012 (2) | 0.0044 (3) | 0.0022 (3) |
N3 | 0.0129 (3) | 0.0150 (3) | 0.0199 (3) | −0.0007 (2) | 0.0009 (2) | 0.0064 (3) |
C31 | 0.0165 (4) | 0.0218 (4) | 0.0213 (4) | 0.0024 (3) | −0.0015 (3) | 0.0085 (3) |
O1 | 0.0137 (3) | 0.0267 (3) | 0.0164 (3) | −0.0035 (2) | 0.0013 (2) | 0.0042 (2) |
C3 | 0.0165 (4) | 0.0363 (5) | 0.0183 (4) | 0.0047 (3) | 0.0060 (3) | 0.0059 (3) |
C4 | 0.0182 (4) | 0.0252 (4) | 0.0160 (4) | −0.0010 (3) | 0.0051 (3) | 0.0073 (3) |
S1—C2 | 1.7110 (8) | C11—H11B | 0.9800 |
N1—C2 | 1.3386 (10) | C11—H11C | 0.9800 |
N1—C11 | 1.4541 (10) | N3—H03 | 0.845 (13) |
C2—N3 | 1.3389 (10) | C31—H31A | 0.9800 |
N3—C31 | 1.4571 (11) | C31—H31B | 0.9800 |
O1—C4 | 1.4283 (10) | C31—H31C | 0.9800 |
O1—C3 | 1.4335 (11) | C3—H3A | 0.9900 |
C3—C4i | 1.5095 (12) | C3—H3B | 0.9900 |
C4—C3i | 1.5096 (12) | C4—H4A | 0.9900 |
N1—H01 | 0.840 (13) | C4—H4B | 0.9900 |
C11—H11A | 0.9800 | ||
C2—N1—C11 | 124.91 (7) | C31—N3—H03 | 116.0 (8) |
N1—C2—N3 | 117.26 (7) | N3—C31—H31A | 109.5 |
N1—C2—S1 | 119.96 (6) | N3—C31—H31B | 109.5 |
N3—C2—S1 | 122.79 (6) | H31A—C31—H31B | 109.5 |
C2—N3—C31 | 125.38 (7) | N3—C31—H31C | 109.5 |
C4—O1—C3 | 110.26 (6) | H31A—C31—H31C | 109.5 |
O1—C3—C4i | 110.70 (7) | H31B—C31—H31C | 109.5 |
O1—C4—C3i | 110.34 (7) | O1—C3—H3A | 109.5 |
C2—N1—H01 | 117.3 (8) | C4i—C3—H3A | 109.5 |
C11—N1—H01 | 117.4 (8) | O1—C3—H3B | 109.5 |
N1—C11—H11A | 109.5 | C4i—C3—H3B | 109.5 |
N1—C11—H11B | 109.5 | H3A—C3—H3B | 108.1 |
H11A—C11—H11B | 109.5 | O1—C4—H4A | 109.6 |
N1—C11—H11C | 109.5 | C3i—C4—H4A | 109.6 |
H11A—C11—H11C | 109.5 | O1—C4—H4B | 109.6 |
H11B—C11—H11C | 109.5 | C3i—C4—H4B | 109.6 |
C2—N3—H03 | 118.5 (8) | H4A—C4—H4B | 108.1 |
C11—N1—C2—N3 | −3.70 (11) | S1—C2—N3—C31 | −2.20 (11) |
C11—N1—C2—S1 | 176.59 (6) | C4—O1—C3—C4i | 57.62 (10) |
N1—C2—N3—C31 | 178.10 (8) | C3—O1—C4—C3i | −57.41 (10) |
Symmetry code: (i) −x, −y, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H01···S1ii | 0.840 (13) | 2.520 (13) | 3.3295 (7) | 162.2 (11) |
N3—H03···O1 | 0.845 (13) | 2.143 (13) | 2.9290 (9) | 154.4 (11) |
Symmetry code: (ii) −x+2, −y+1, −z+2. |
C5H12N2S | F(000) = 288 |
Mr = 132.23 | Dx = 1.228 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
a = 5.4621 (2) Å | Cell parameters from 4399 reflections |
b = 12.0353 (4) Å | θ = 3.4–30.8° |
c = 10.9309 (4) Å | µ = 0.36 mm−1 |
β = 95.641 (4)° | T = 100 K |
V = 715.10 (4) Å3 | 0.20 × 0.20 × 0.20 mm |
Z = 4 |
Oxford Diffraction Xcalibur, Eos diffractometer | 988 reflections with I > 2σ(I) |
Radiation source: Enhance (Mo) X-ray Source | Rint = 0.022 |
Graphite monochromator | θmax = 30.8°, θmin = 3.4° |
Detector resolution: 16.1419 pixels mm-1 | h = −7→7 |
ω–scan | k = −16→17 |
9123 measured reflections | l = −15→15 |
1072 independent reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.022 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.059 | H-atom parameters constrained |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0263P)2 + 0.3639P] where P = (Fo2 + 2Fc2)/3 |
1072 reflections | (Δ/σ)max = 0.001 |
40 parameters | Δρmax = 0.31 e Å−3 |
0 restraints | Δρmin = −0.15 e Å−3 |
C5H12N2S | V = 715.10 (4) Å3 |
Mr = 132.23 | Z = 4 |
Monoclinic, C2/c | Mo Kα radiation |
a = 5.4621 (2) Å | µ = 0.36 mm−1 |
b = 12.0353 (4) Å | T = 100 K |
c = 10.9309 (4) Å | 0.20 × 0.20 × 0.20 mm |
β = 95.641 (4)° |
Oxford Diffraction Xcalibur, Eos diffractometer | 988 reflections with I > 2σ(I) |
9123 measured reflections | Rint = 0.022 |
1072 independent reflections |
R[F2 > 2σ(F2)] = 0.022 | 0 restraints |
wR(F2) = 0.059 | H-atom parameters constrained |
S = 1.06 | Δρmax = 0.31 e Å−3 |
1072 reflections | Δρmin = −0.15 e Å−3 |
40 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. The methyl groups were refined as idealized rigid groups allowed to rotate but not tip. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.5000 | 0.60583 (2) | 0.2500 | 0.02080 (10) | |
N1 | 0.38291 (13) | 0.40519 (6) | 0.33192 (6) | 0.01719 (15) | |
C2 | 0.5000 | 0.46519 (9) | 0.2500 | 0.0146 (2) | |
C11 | 0.19738 (16) | 0.45517 (8) | 0.40165 (8) | 0.02223 (18) | |
H11A | 0.2745 | 0.4799 | 0.4818 | 0.033* | |
H11B | 0.0696 | 0.4002 | 0.4138 | 0.033* | |
H11C | 0.1232 | 0.5190 | 0.3563 | 0.033* | |
C12 | 0.48412 (16) | 0.30059 (7) | 0.38405 (7) | 0.02043 (17) | |
H12A | 0.6417 | 0.2852 | 0.3517 | 0.031* | |
H12B | 0.3688 | 0.2399 | 0.3615 | 0.031* | |
H12C | 0.5094 | 0.3069 | 0.4738 | 0.031* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.02953 (17) | 0.01594 (14) | 0.01703 (14) | 0.000 | 0.00277 (11) | 0.000 |
N1 | 0.0189 (3) | 0.0189 (3) | 0.0145 (3) | 0.0009 (2) | 0.0060 (2) | 0.0016 (2) |
C2 | 0.0146 (4) | 0.0180 (5) | 0.0112 (4) | 0.000 | 0.0004 (3) | 0.000 |
C11 | 0.0194 (4) | 0.0313 (4) | 0.0171 (4) | 0.0018 (3) | 0.0073 (3) | −0.0012 (3) |
C12 | 0.0263 (4) | 0.0192 (4) | 0.0159 (3) | −0.0009 (3) | 0.0025 (3) | 0.0031 (3) |
S1—C2 | 1.6925 (11) | C11—H11B | 0.9800 |
N1—C2 | 1.3583 (9) | C11—H11C | 0.9800 |
N1—C11 | 1.4566 (10) | C12—H12A | 0.9800 |
N1—C12 | 1.4674 (10) | C12—H12B | 0.9800 |
C2—N1i | 1.3583 (9) | C12—H12C | 0.9800 |
C11—H11A | 0.9800 | ||
C2—N1—C11 | 121.49 (7) | H11A—C11—H11C | 109.5 |
C2—N1—C12 | 121.89 (7) | H11B—C11—H11C | 109.5 |
C11—N1—C12 | 113.95 (7) | N1—C12—H12A | 109.5 |
N1i—C2—N1 | 115.76 (10) | N1—C12—H12B | 109.5 |
N1i—C2—S1 | 122.12 (5) | H12A—C12—H12B | 109.5 |
N1—C11—H11A | 109.5 | N1—C12—H12C | 109.5 |
N1—C11—H11B | 109.5 | H12A—C12—H12C | 109.5 |
H11A—C11—H11B | 109.5 | H12B—C12—H12C | 109.5 |
N1—C11—H11C | 109.5 | N1—C2—S1 | 122.12 (5) |
C11—N1—C2—N1i | −163.00 (8) | C11—N1—C2—S1 | 17.00 (8) |
C12—N1—C2—N1i | 36.64 (6) | C12—N1—C2—S1 | −143.36 (6) |
Symmetry code: (i) −x+1, y, −z+1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
C12—H12B···S1ii | 0.98 | 2.77 | 3.7246 (9) | 165 |
Symmetry code: (ii) x−1/2, y−1/2, z. |
Experimental details
(birke) | (fichte) | (buche) | (kirsche) | |
Crystal data | ||||
Chemical formula | C2H6N2S | C3H8N2S | C6H15N3OS | C5H12N2OS |
Mr | 90.15 | 104.17 | 177.27 | 148.23 |
Crystal system, space group | Triclinic, P1 | Orthorhombic, Pbca | Monoclinic, P21/n | Monoclinic, P21/c |
Temperature (K) | 100 | 100 | 100 | 100 |
a, b, c (Å) | 7.6615 (7), 7.6945 (6), 8.0283 (6) | 6.15884 (15), 11.5953 (3), 14.6390 (4) | 6.56953 (19), 8.7346 (3), 16.2322 (5) | 6.4979 (2), 7.0116 (3), 16.7097 (6) |
α, β, γ (°) | 78.182 (7), 73.785 (7), 81.448 (7) | 90, 90, 90 | 90, 96.964 (3), 90 | 90, 92.982 (4), 90 |
V (Å3) | 442.71 (6) | 1045.42 (4) | 924.57 (5) | 760.27 (5) |
Z | 4 | 8 | 4 | 4 |
Radiation type | Mo Kα | Mo Kα | Mo Kα | Mo Kα |
µ (mm−1) | 0.54 | 0.47 | 0.30 | 0.35 |
Crystal size (mm) | 0.30 × 0.08 × 0.07 | 0.20 × 0.20 × 0.12 | 0.60 × 0.30 × 0.20 | 0.40 × 0.34 × 0.07 |
Data collection | ||||
Diffractometer | Oxford Diffraction Xcalibur, Eos diffractometer | Oxford Diffraction Xcalibur, Eos diffractometer | Oxford Diffraction Xcalibur, Eos diffractometer | Oxford Diffraction Xcalibur, Eos diffractometer |
Absorption correction | Multi-scan CrysAlis PRO, Oxford Diffraction Ltd., Version 1.171.35.19 (release 27-10-2011 CrysAlis171 .NET) (compiled Oct 27 2011,15:02:11) | Multi-scan CrysAlis PRO, Oxford Diffraction Ltd., Version 1.171.35.19 (release 27-10-2011 CrysAlis171 .NET) (compiled Oct 27 2011,15:02:11) | Multi-scan CrysAlis PRO, Oxford Diffraction Ltd., Version 1.171.35.19 (release 27-10-2011 CrysAlis171 .NET) (compiled Oct 27 2011,15:02:11) | Multi-scan CrysAlis PRO, Oxford Diffraction Ltd., Version 1.171.35.19 (release 27-10-2011 CrysAlis171 .NET) (compiled Oct 27 2011,15:02:11) |
Tmin, Tmax | 0.888, 1.000 | 0.977, 1.000 | 0.930, 1.000 | 0.899, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 23416, 2543, 2283 | 47980, 1620, 1433 | 24602, 2766, 2481 | 26635, 2295, 2020 |
Rint | 0.032 | 0.041 | 0.023 | 0.037 |
(sin θ/λ)max (Å−1) | 0.704 | 0.723 | 0.721 | 0.721 |
Refinement | ||||
R[F2 > 2σ(F2)], wR(F2), S | 0.023, 0.059, 1.10 | 0.026, 0.063, 1.07 | 0.025, 0.065, 1.05 | 0.030, 0.075, 1.08 |
No. of reflections | 2543 | 1620 | 2766 | 2295 |
No. of parameters | 117 | 65 | 117 | 92 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement | H atoms treated by a mixture of independent and constrained refinement | H atoms treated by a mixture of independent and constrained refinement | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.31, −0.28 | 0.36, −0.21 | 0.42, −0.22 | 0.37, −0.34 |
(laerche) | (judo) | |
Crystal data | ||
Chemical formula | C5H12N2OS | C5H12N2S |
Mr | 148.23 | 132.23 |
Crystal system, space group | Triclinic, P1 | Monoclinic, C2/c |
Temperature (K) | 100 | 100 |
a, b, c (Å) | 6.8470 (4), 7.0982 (4), 8.6412 (3) | 5.4621 (2), 12.0353 (4), 10.9309 (4) |
α, β, γ (°) | 106.676 (5), 105.448 (5), 90.679 (4) | 90, 95.641 (4), 90 |
V (Å3) | 386.00 (3) | 715.10 (4) |
Z | 2 | 4 |
Radiation type | Mo Kα | Mo Kα |
µ (mm−1) | 0.35 | 0.36 |
Crystal size (mm) | 0.40 × 0.40 × 0.30 | 0.20 × 0.20 × 0.20 |
Data collection | ||
Diffractometer | Oxford Diffraction Xcalibur, Eos diffractometer | Oxford Diffraction Xcalibur, Eos diffractometer |
Absorption correction | Multi-scan CrysAlis PRO, Oxford Diffraction Ltd., Version 1.171.35.19 (release 27-10-2011 CrysAlis171 .NET) (compiled Oct 27 2011,15:02:11) | – |
Tmin, Tmax | 0.963, 1.000 | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 19849, 2261, 2152 | 9123, 1072, 988 |
Rint | 0.021 | 0.022 |
(sin θ/λ)max (Å−1) | 0.721 | 0.720 |
Refinement | ||
R[F2 > 2σ(F2)], wR(F2), S | 0.023, 0.060, 1.06 | 0.022, 0.059, 1.06 |
No. of reflections | 2261 | 1072 |
No. of parameters | 92 | 40 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.41, −0.19 | 0.31, −0.15 |
Computer programs: CrysAlis PRO, Oxford Diffraction Ltd., Version 1.171.35.19 (release 27-10-2011 CrysAlis171 .NET) (compiled Oct 27 2011,15:02:11), CrysAlis PRO, Oxford Diffraction Ltd., Version 1.171.35.21 (release 20-01-2012 CrysAlis171 .NET) (compiled Jan 23 2012,18:06:46), SHELXS97 (Sheldrick, 1990), SHELXL97 (Sheldrick, 1997), Bruker XP, SHELXL97.
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H01···S1' | 0.795 (16) | 2.748 (16) | 3.4636 (10) | 150.7 (14) |
N3—H02···S1'i | 0.853 (15) | 2.766 (15) | 3.5496 (11) | 153.6 (13) |
N3—H03···S1ii | 0.833 (16) | 2.571 (16) | 3.3930 (10) | 169.6 (13) |
N1'—H01'···S1 | 0.819 (16) | 2.564 (16) | 3.3426 (10) | 159.1 (13) |
N3'—H02'···S1iii | 0.878 (16) | 2.588 (16) | 3.4033 (10) | 154.9 (13) |
N3'—H03'···S1'iv | 0.838 (16) | 2.612 (16) | 3.4377 (10) | 168.7 (13) |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+2, −y+1, −z; (iii) x−1, y, z; (iv) −x, −y+2, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H02···S1i | 0.854 (15) | 2.535 (15) | 3.3752 (9) | 167.9 (13) |
N3—H01···S1ii | 0.861 (17) | 2.660 (17) | 3.3584 (9) | 139.1 (13) |
Symmetry codes: (i) −x+2, −y+1, −z+1; (ii) −x+3/2, y+1/2, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H01···S1i | 0.824 (12) | 2.576 (13) | 3.3665 (7) | 161.2 (11) |
N3—H02···N4 | 0.872 (13) | 2.142 (13) | 2.9826 (10) | 162.0 (12) |
N3—H03···S1ii | 0.850 (13) | 2.647 (13) | 3.4790 (7) | 166.5 (10) |
N4—H04···O1iii | 0.822 (14) | 2.333 (14) | 3.0611 (10) | 147.9 (12) |
Symmetry codes: (i) −x+1, −y, −z+1; (ii) −x+1, −y+1, −z+1; (iii) −x−1/2, y−1/2, −z+1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H02···S1i | 0.868 (17) | 2.533 (17) | 3.3870 (10) | 167.9 (14) |
N3—H01···O1 | 0.832 (17) | 2.177 (17) | 2.9678 (13) | 158.9 (15) |
Symmetry code: (i) −x+1, −y+1, −z. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H01···S1i | 0.840 (13) | 2.520 (13) | 3.3295 (7) | 162.2 (11) |
N3—H03···O1 | 0.845 (13) | 2.143 (13) | 2.9290 (9) | 154.4 (11) |
Symmetry code: (i) −x+2, −y+1, −z+2. |
D—H···A | D—H | H···A | D···A | D—H···A |
C12—H12B···S1i | 0.98 | 2.77 | 3.7246 (9) | 165.3 |
Symmetry code: (i) x−1/2, y−1/2, z. |
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