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The crystal structures of the title compounds, ammonium risedronate dihydrate, NH
4+·C
7H
10NO
7P
2−·2H
2O, (I), and potassium risedronate dihydrate, K
+·C
7H
10NO
7P
2−·2H
2O, (II), have been determined from single-crystal X-ray data collected at 120 K. Compound (I) forms a three-dimensional hydrogen-bonded network which connects the ammonium and risedronate ions and the water molecules. In compound (II), the K
+ ions are seven-coordinated in a capped distorted trigonal prism. The coordination polyhedra form chains by corner-sharing, and these chains are connected by phosphonate groups into layers in the
ac plane. The layers are stacked and connected by hydrogen bonds in the
b direction. The risedronate conformation is determined by intramolecular interactions fine-tuned by crystal packing effects. All H-atom donors in both structures are involved in hydrogen bonding, with
DA distances between 2.510 (2) and 3.009 (2) Å.
Supporting information
CCDC references: 603184; 603185
Compound (I) was prepared as follows. Risedronic acid (602.26 g) was stirred in water (1200 ml) and ammonia was added (600 ml, 16 M). The mixture was heated under reflux until all material had dissolved. Ethanol (1000 ml) and water (750 ml) were added, and the mixture was stirred overnight at room temperature. The precipitate which formed was recovered by filtration, rinsed with water–ethanol (Ratio?) and dried at 333 K under a vacuum.
Compound (II) was prepared as follows. Risedronic acid (6 g) was stirred in water (12 ml) at approximately 333 K. KOH (19.5 ml, 1 N) was added and the mixture was refluxed until a clear solution was obtained. The solution was cooled to room temperature with stirring and finally cooled to 273 K. The precipitate which formed was recovered by filtration and rinsed with water–ethanol (Ratio?) and ethanol, and dried at 333 K under a vacuum.
Crystals for data collection were prepared in the following way. Compound (I) or (II) (1 g) was dissolved in sterilized water (15 ml) and heated under reflux until dissolved. Slow cooling yielded small crystals which were then used to nucleate a repeated recrystallization. The crystals obtained were dried in a vacuum at 313 K for 24 h.
The N atoms in the pyridinium rings were initially assigned based on thermal parameters, and later confirmed by the C—N bond lengths and hydrogen bonding. All H-atom parameters were initially refined freely. In the final cycles, the H atoms of CH2, CH and NH groups were placed in calculated positions, with C—H = 0.98 (CH2) or 0.93 (CH) and with N—H = 0.86 Å, and refined as riding atoms. For the OH groups and water molecules, the O—H distances were restrained to 0.82 (2) Å, and for NH4+ the N—H distances were restrained to 0.89 (2) Å. The displacement parameters were set to 1.2 (CH2, CH and NH) or 1.5 (OH and NH4) times Ueq of the parent C, O or N atoms.
For both compounds, data collection: SMART (Bruker, 1997–1999); cell refinement: SAINT-Plus (Bruker, 1997–1999); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 (Farrugia, 1997) and ATOMS (Dowty, 2000); software used to prepare material for publication: SHELXL97.
(I) Ammonium [1-hydroxy-1-phosphono-2-(pyridinium-3-yl)ethyl]phosphonate dihydrate
top
Crystal data top
NH4+·C7H10NO7P2−·2H2O | F(000) = 704 |
Mr = 336.17 | Dx = 1.666 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 5685 reflections |
a = 10.0911 (6) Å | θ = 2.4–30.8° |
b = 12.2790 (7) Å | µ = 0.37 mm−1 |
c = 11.1598 (7) Å | T = 118 K |
β = 104.240 (1)° | Plate, colourless |
V = 1340.31 (14) Å3 | 0.28 × 0.14 × 0.04 mm |
Z = 4 | |
Data collection top
Bruker SMART APEX diffractometer | 3279 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.076 |
Graphite monochromator | θmax = 31.0°, θmin = 2.4° |
ω scan, frame data integration | h = −14→14 |
17561 measured reflections | k = −17→16 |
3965 independent reflections | l = −15→15 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.048 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.111 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.10 | w = 1/[σ2(Fo2) + (0.05P)2 + 0.1262P] where P = (Fo2 + 2Fc2)/3 |
3965 reflections | (Δ/σ)max < 0.001 |
214 parameters | Δρmax = 0.69 e Å−3 |
11 restraints | Δρmin = −0.33 e Å−3 |
Crystal data top
NH4+·C7H10NO7P2−·2H2O | V = 1340.31 (14) Å3 |
Mr = 336.17 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 10.0911 (6) Å | µ = 0.37 mm−1 |
b = 12.2790 (7) Å | T = 118 K |
c = 11.1598 (7) Å | 0.28 × 0.14 × 0.04 mm |
β = 104.240 (1)° | |
Data collection top
Bruker SMART APEX diffractometer | 3279 reflections with I > 2σ(I) |
17561 measured reflections | Rint = 0.076 |
3965 independent reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.048 | 11 restraints |
wR(F2) = 0.111 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.10 | Δρmax = 0.69 e Å−3 |
3965 reflections | Δρmin = −0.33 e Å−3 |
214 parameters | |
Special details top
Experimental. Oxford Cryosystem liquid nitrogen cryostream cooler |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
P1 | 0.10983 (5) | 0.80069 (4) | −0.03272 (4) | 0.00903 (12) | |
P2 | 0.15912 (5) | 0.65558 (4) | 0.19432 (5) | 0.00888 (12) | |
O1 | 0.24627 (14) | 0.85740 (11) | −0.01361 (13) | 0.0125 (3) | |
O2 | 0.09620 (15) | 0.69201 (11) | −0.09891 (13) | 0.0138 (3) | |
O3 | −0.00384 (15) | 0.88178 (12) | −0.09911 (14) | 0.0149 (3) | |
H3 | −0.066 (2) | 0.860 (2) | −0.1571 (19) | 0.022* | |
O4 | 0.10409 (14) | 0.62244 (11) | 0.30300 (13) | 0.0129 (3) | |
O5 | 0.30956 (14) | 0.67993 (12) | 0.22075 (13) | 0.0157 (3) | |
O6 | 0.11492 (16) | 0.56205 (12) | 0.09475 (14) | 0.0162 (3) | |
H6A | 0.102 (3) | 0.586 (2) | 0.0246 (17) | 0.024* | |
O7 | −0.07230 (14) | 0.75371 (11) | 0.09794 (13) | 0.0116 (3) | |
H7A | −0.121 (2) | 0.809 (2) | 0.070 (2) | 0.017* | |
O8 | 0.22054 (15) | 0.58698 (12) | 0.54314 (14) | 0.0146 (3) | |
H8A | 0.242 (3) | 0.5230 (14) | 0.544 (2) | 0.022* | |
H8B | 0.194 (3) | 0.608 (2) | 0.4709 (17) | 0.022* | |
O9 | 0.32192 (16) | 0.89092 (13) | 0.76991 (14) | 0.0186 (3) | |
H9A | 0.3998 (19) | 0.870 (2) | 0.777 (3) | 0.028* | |
H9B | 0.305 (3) | 0.873 (2) | 0.8372 (19) | 0.028* | |
C1 | 0.07073 (19) | 0.77769 (15) | 0.11929 (17) | 0.0088 (3) | |
C2 | 0.1102 (2) | 0.88079 (15) | 0.20077 (18) | 0.0111 (4) | |
H2A | 0.2084 | 0.8937 | 0.2132 | 0.013* | |
H2B | 0.0620 | 0.9436 | 0.1561 | 0.013* | |
C3 | 0.0778 (2) | 0.87403 (15) | 0.32546 (19) | 0.0109 (4) | |
C4 | 0.1822 (2) | 0.86570 (16) | 0.43179 (18) | 0.0131 (4) | |
H4 | 0.2724 | 0.8636 | 0.4257 | 0.016* | |
C5 | 0.0269 (2) | 0.86081 (17) | 0.5578 (2) | 0.0208 (5) | |
H5 | 0.0112 | 0.8558 | 0.6363 | 0.025* | |
C6 | −0.0809 (2) | 0.86850 (17) | 0.4561 (2) | 0.0204 (5) | |
H6 | −0.1702 | 0.8680 | 0.4649 | 0.025* | |
C7 | −0.0556 (2) | 0.87706 (17) | 0.3390 (2) | 0.0164 (4) | |
H7 | −0.1281 | 0.8848 | 0.2697 | 0.020* | |
N1 | 0.15506 (19) | 0.86055 (14) | 0.54411 (17) | 0.0169 (4) | |
H1 | 0.2220 | 0.8570 | 0.6088 | 0.025* | |
N2 | 0.49123 (18) | 0.90088 (14) | 0.17132 (17) | 0.0130 (3) | |
H2C | 0.414 (2) | 0.874 (2) | 0.120 (2) | 0.019* | |
H2D | 0.560 (2) | 0.903 (2) | 0.134 (2) | 0.019* | |
H2E | 0.468 (2) | 0.9684 (14) | 0.188 (2) | 0.019* | |
H2F | 0.518 (2) | 0.8633 (19) | 0.2477 (17) | 0.019* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
P1 | 0.0100 (2) | 0.0088 (2) | 0.0078 (2) | −0.00154 (18) | 0.00133 (17) | 0.00021 (18) |
P2 | 0.0087 (2) | 0.0086 (2) | 0.0092 (2) | 0.00117 (17) | 0.00190 (18) | 0.00091 (18) |
O1 | 0.0113 (7) | 0.0144 (7) | 0.0119 (7) | −0.0032 (5) | 0.0029 (5) | −0.0001 (5) |
O2 | 0.0198 (7) | 0.0111 (7) | 0.0101 (7) | −0.0020 (5) | 0.0031 (6) | −0.0016 (5) |
O3 | 0.0157 (7) | 0.0116 (7) | 0.0136 (7) | −0.0001 (5) | −0.0039 (6) | 0.0020 (6) |
O4 | 0.0148 (7) | 0.0126 (7) | 0.0116 (7) | 0.0002 (5) | 0.0038 (6) | 0.0028 (5) |
O5 | 0.0090 (7) | 0.0214 (8) | 0.0156 (7) | 0.0020 (6) | 0.0012 (6) | 0.0047 (6) |
O6 | 0.0244 (8) | 0.0098 (7) | 0.0129 (7) | 0.0035 (6) | 0.0018 (6) | −0.0003 (6) |
O7 | 0.0059 (6) | 0.0111 (7) | 0.0172 (7) | 0.0007 (5) | 0.0018 (5) | 0.0018 (5) |
O8 | 0.0186 (7) | 0.0121 (7) | 0.0126 (7) | 0.0021 (6) | 0.0029 (6) | 0.0018 (6) |
O9 | 0.0134 (7) | 0.0289 (9) | 0.0151 (8) | 0.0009 (6) | 0.0065 (6) | 0.0001 (7) |
C1 | 0.0065 (8) | 0.0093 (8) | 0.0100 (9) | 0.0010 (6) | 0.0009 (7) | 0.0008 (7) |
C2 | 0.0117 (9) | 0.0100 (8) | 0.0124 (9) | −0.0011 (7) | 0.0043 (7) | 0.0002 (7) |
C3 | 0.0137 (9) | 0.0059 (8) | 0.0148 (10) | −0.0013 (7) | 0.0065 (8) | −0.0017 (7) |
C4 | 0.0177 (10) | 0.0094 (9) | 0.0139 (10) | 0.0000 (7) | 0.0073 (8) | −0.0009 (7) |
C5 | 0.0345 (13) | 0.0132 (10) | 0.0209 (11) | −0.0016 (9) | 0.0184 (10) | 0.0008 (8) |
C6 | 0.0202 (11) | 0.0138 (10) | 0.0339 (13) | −0.0034 (8) | 0.0193 (10) | −0.0059 (9) |
C7 | 0.0148 (10) | 0.0140 (10) | 0.0217 (11) | −0.0018 (8) | 0.0068 (8) | −0.0042 (8) |
N1 | 0.0249 (10) | 0.0131 (8) | 0.0131 (9) | 0.0014 (7) | 0.0052 (7) | 0.0016 (7) |
N2 | 0.0123 (8) | 0.0127 (8) | 0.0137 (9) | 0.0012 (7) | 0.0028 (7) | 0.0000 (7) |
Geometric parameters (Å, º) top
P1—O1 | 1.5105 (14) | C2—H2A | 0.9800 |
P1—O2 | 1.5150 (15) | C2—H2B | 0.9800 |
P1—O3 | 1.5614 (15) | C3—C4 | 1.383 (3) |
P1—C1 | 1.8554 (19) | C3—C7 | 1.391 (3) |
P2—O5 | 1.5036 (14) | C4—N1 | 1.348 (3) |
P2—O4 | 1.5087 (14) | C4—H4 | 0.9300 |
P2—O6 | 1.5839 (15) | C5—N1 | 1.339 (3) |
P2—C1 | 1.8378 (19) | C5—C6 | 1.369 (3) |
O3—H3 | 0.826 (16) | C5—H5 | 0.9300 |
O6—H6A | 0.816 (16) | C6—C7 | 1.396 (3) |
O7—C1 | 1.434 (2) | C6—H6 | 0.9300 |
O7—H7A | 0.85 (3) | C7—H7 | 0.9300 |
O8—H8A | 0.815 (16) | N1—H1 | 0.8600 |
O8—H8B | 0.824 (16) | N2—H2C | 0.906 (16) |
O9—H9A | 0.810 (17) | N2—H2D | 0.885 (16) |
O9—H9B | 0.841 (17) | N2—H2E | 0.896 (16) |
C1—C2 | 1.552 (3) | N2—H2F | 0.948 (16) |
C2—C3 | 1.508 (3) | | |
| | | |
O1—P1—O2 | 116.43 (8) | C1—C2—H2B | 108.7 |
O1—P1—O3 | 108.10 (8) | H2A—C2—H2B | 107.6 |
O2—P1—O3 | 111.24 (8) | C4—C3—C7 | 117.51 (18) |
O1—P1—C1 | 109.42 (8) | C4—C3—C2 | 120.23 (17) |
O2—P1—C1 | 107.30 (8) | C7—C3—C2 | 122.26 (18) |
O3—P1—C1 | 103.55 (8) | N1—C4—C3 | 121.01 (19) |
O5—P2—O4 | 116.71 (8) | N1—C4—H4 | 119.5 |
O5—P2—O6 | 112.23 (9) | C3—C4—H4 | 119.5 |
O4—P2—O6 | 105.82 (8) | N1—C5—C6 | 119.9 (2) |
O5—P2—C1 | 106.29 (8) | N1—C5—H5 | 120.0 |
O4—P2—C1 | 110.67 (8) | C6—C5—H5 | 120.0 |
O6—P2—C1 | 104.51 (8) | C5—C6—C7 | 119.3 (2) |
P1—O3—H3 | 119.2 (18) | C5—C6—H6 | 120.3 |
P2—O6—H6A | 111.3 (19) | C7—C6—H6 | 120.3 |
C1—O7—H7A | 111.4 (16) | C3—C7—C6 | 120.3 (2) |
H8A—O8—H8B | 109 (3) | C3—C7—H7 | 119.8 |
H9A—O9—H9B | 104 (3) | C6—C7—H7 | 119.8 |
O7—C1—C2 | 111.54 (15) | C5—N1—C4 | 121.9 (2) |
O7—C1—P2 | 105.31 (12) | C5—N1—H1 | 119.1 |
C2—C1—P2 | 111.88 (13) | C4—N1—H1 | 119.1 |
O7—C1—P1 | 108.12 (12) | H2C—N2—H2D | 111 (2) |
C2—C1—P1 | 109.26 (12) | H2C—N2—H2E | 104 (2) |
P2—C1—P1 | 110.62 (9) | H2D—N2—H2E | 110 (2) |
C3—C2—C1 | 114.40 (15) | H2C—N2—H2F | 114 (2) |
C3—C2—H2A | 108.7 | H2D—N2—H2F | 110 (2) |
C1—C2—H2A | 108.7 | H2E—N2—H2F | 107 (2) |
C3—C2—H2B | 108.7 | | |
| | | |
O7—C1—C2—C3 | 58.1 (2) | C1—C2—C3—C4 | 109.7 (2) |
P1—C1—C2—C3 | 177.59 (13) | C1—C2—C3—C7 | −71.0 (2) |
P2—C1—C2—C3 | −59.55 (19) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H3···O5i | 0.83 (2) | 1.68 (2) | 2.510 (2) | 177 (3) |
O6—H6A···O2 | 0.82 (2) | 1.89 (2) | 2.656 (2) | 157 (3) |
O7—H7A···O8i | 0.85 (3) | 2.01 (3) | 2.818 (2) | 158 (2) |
N1—H1···O9 | 0.86 | 1.88 | 2.690 (2) | 157 |
N2—H2C···O1 | 0.91 (2) | 1.98 (2) | 2.854 (2) | 163 (2) |
N2—H2D···O8ii | 0.89 (2) | 2.12 (2) | 3.009 (2) | 178 (2) |
N2—H2E···O4iii | 0.90 (2) | 2.04 (2) | 2.923 (2) | 171 (2) |
N2—H2F···O2iv | 0.95 (2) | 1.83 (2) | 2.768 (2) | 170 (2) |
O8—H8A···O1v | 0.82 (2) | 2.07 (2) | 2.867 (2) | 166 (3) |
O8—H8B···O4 | 0.82 (2) | 1.88 (2) | 2.684 (2) | 165 (3) |
O9—H9A···O4iv | 0.81 (2) | 2.01 (2) | 2.785 (2) | 159 (3) |
O9—H9B···O1vi | 0.84 (2) | 1.91 (2) | 2.738 (2) | 169 (3) |
Symmetry codes: (i) x−1/2, −y+3/2, z−1/2; (ii) x+1/2, −y+3/2, z−1/2; (iii) −x+1/2, y+1/2, −z+1/2; (iv) x+1/2, −y+3/2, z+1/2; (v) −x+1/2, y−1/2, −z+1/2; (vi) x, y, z+1. |
(II) monopotassium [1-hydroxy-1-phosphono-2-(pyridinum-3-yl)ethyl]phosphonate dihydrate
top
Crystal data top
K+·C7H10NO7P2−·2H2O | F(000) = 736 |
Mr = 357.23 | Dx = 1.862 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 4900 reflections |
a = 6.5356 (4) Å | θ = 2.9–28.0° |
b = 28.1606 (17) Å | µ = 0.71 mm−1 |
c = 6.9636 (4) Å | T = 118 K |
β = 95.993 (1)° | Tabular, colourless |
V = 1274.62 (13) Å3 | 0.18 × 0.12 × 0.10 mm |
Z = 4 | |
Data collection top
Bruker SMART APEX diffractometer | 2644 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.064 |
Graphite monochromator | θmax = 28.0°, θmin = 1.5° |
ω scan, frame data integration | h = −8→8 |
9075 measured reflections | k = −34→37 |
3052 independent reflections | l = −8→9 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.034 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.088 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.01 | w = 1/[σ2(Fo2) + (0.0496P)2] where P = (Fo2 + 2Fc2)/3 |
3052 reflections | (Δ/σ)max < 0.001 |
202 parameters | Δρmax = 0.76 e Å−3 |
7 restraints | Δρmin = −0.47 e Å−3 |
Crystal data top
K+·C7H10NO7P2−·2H2O | V = 1274.62 (13) Å3 |
Mr = 357.23 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 6.5356 (4) Å | µ = 0.71 mm−1 |
b = 28.1606 (17) Å | T = 118 K |
c = 6.9636 (4) Å | 0.18 × 0.12 × 0.10 mm |
β = 95.993 (1)° | |
Data collection top
Bruker SMART APEX diffractometer | 2644 reflections with I > 2σ(I) |
9075 measured reflections | Rint = 0.064 |
3052 independent reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.034 | 7 restraints |
wR(F2) = 0.088 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.01 | Δρmax = 0.76 e Å−3 |
3052 reflections | Δρmin = −0.47 e Å−3 |
202 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
K | 0.69496 (6) | 0.239806 (14) | 0.88778 (6) | 0.01217 (11) | |
P1 | 0.24087 (7) | 0.177225 (16) | 0.87208 (6) | 0.00835 (12) | |
P2 | −0.03296 (7) | 0.141948 (16) | 0.50669 (6) | 0.00838 (12) | |
O1 | 0.42836 (18) | 0.16194 (5) | 1.00110 (17) | 0.0115 (3) | |
O2 | 0.26947 (19) | 0.22005 (5) | 0.74986 (17) | 0.0113 (3) | |
O3 | 0.05627 (19) | 0.18658 (5) | 0.99547 (18) | 0.0113 (3) | |
H3 | 0.075 (4) | 0.1751 (8) | 1.100 (2) | 0.017* | |
O4 | −0.14134 (19) | 0.09669 (4) | 0.43510 (18) | 0.0125 (3) | |
O5 | 0.07269 (19) | 0.16763 (5) | 0.35678 (17) | 0.0124 (3) | |
O6 | −0.18954 (19) | 0.17523 (5) | 0.60046 (18) | 0.0130 (3) | |
H6A | −0.285 (3) | 0.1836 (8) | 0.526 (3) | 0.019* | |
O7 | 0.07289 (19) | 0.08995 (4) | 0.82602 (18) | 0.0108 (3) | |
H7A | −0.020 (3) | 0.1007 (8) | 0.882 (3) | 0.016* | |
O8 | −0.2488 (2) | 0.09762 (5) | 0.04058 (19) | 0.0143 (3) | |
H8A | −0.342 (3) | 0.1169 (7) | 0.034 (3) | 0.021* | |
H8B | −0.207 (3) | 0.0981 (9) | 0.155 (2) | 0.021* | |
O9 | 0.54096 (19) | 0.20723 (5) | 1.33856 (18) | 0.0122 (3) | |
H9A | 0.604 (3) | 0.2306 (7) | 1.305 (3) | 0.018* | |
H9B | 0.513 (4) | 0.1913 (8) | 1.240 (3) | 0.018* | |
C1 | 0.1551 (3) | 0.12665 (6) | 0.7137 (2) | 0.0081 (3) | |
C2 | 0.3496 (3) | 0.10569 (6) | 0.6385 (3) | 0.0108 (4) | |
H2A | 0.4218 | 0.1313 | 0.5781 | 0.013* | |
H2B | 0.4409 | 0.0942 | 0.7493 | 0.013* | |
C3 | 0.3134 (3) | 0.06566 (6) | 0.4951 (3) | 0.0104 (3) | |
C4 | 0.2587 (3) | 0.02066 (7) | 0.5511 (3) | 0.0117 (4) | |
H4 | 0.2412 | 0.0149 | 0.6799 | 0.014* | |
C5 | 0.2560 (3) | −0.00876 (7) | 0.2362 (3) | 0.0138 (4) | |
H5 | 0.2368 | −0.0341 | 0.1507 | 0.017* | |
C6 | 0.3108 (3) | 0.03519 (7) | 0.1713 (3) | 0.0144 (4) | |
H6 | 0.3290 | 0.0398 | 0.0419 | 0.017* | |
C7 | 0.3385 (3) | 0.07252 (7) | 0.3011 (3) | 0.0124 (4) | |
H7 | 0.3741 | 0.1024 | 0.2582 | 0.015* | |
N1 | 0.2307 (2) | −0.01481 (5) | 0.4229 (2) | 0.0109 (3) | |
H1 | 0.1953 | −0.0423 | 0.4617 | 0.013* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
K | 0.01021 (19) | 0.0124 (2) | 0.0141 (2) | −0.00048 (13) | 0.00189 (15) | −0.00141 (14) |
P1 | 0.0079 (2) | 0.0083 (2) | 0.0087 (2) | −0.00003 (16) | 0.00014 (17) | −0.00057 (16) |
P2 | 0.0083 (2) | 0.0089 (2) | 0.0078 (2) | −0.00024 (16) | 0.00011 (17) | 0.00022 (15) |
O1 | 0.0098 (6) | 0.0125 (6) | 0.0116 (6) | 0.0014 (5) | −0.0015 (5) | −0.0017 (5) |
O2 | 0.0123 (6) | 0.0112 (6) | 0.0105 (6) | −0.0010 (5) | 0.0020 (5) | −0.0002 (5) |
O3 | 0.0108 (6) | 0.0147 (7) | 0.0083 (6) | 0.0025 (5) | 0.0014 (5) | 0.0013 (5) |
O4 | 0.0126 (6) | 0.0126 (6) | 0.0114 (6) | −0.0026 (5) | −0.0024 (5) | 0.0003 (5) |
O5 | 0.0139 (6) | 0.0138 (6) | 0.0095 (6) | −0.0018 (5) | 0.0010 (5) | 0.0009 (5) |
O6 | 0.0098 (6) | 0.0165 (7) | 0.0120 (6) | 0.0048 (5) | −0.0018 (5) | −0.0004 (5) |
O7 | 0.0114 (6) | 0.0096 (6) | 0.0118 (6) | 0.0005 (5) | 0.0034 (5) | 0.0023 (5) |
O8 | 0.0128 (6) | 0.0175 (7) | 0.0123 (6) | 0.0030 (5) | 0.0006 (5) | −0.0016 (5) |
O9 | 0.0126 (6) | 0.0111 (6) | 0.0124 (7) | −0.0017 (5) | −0.0011 (5) | −0.0017 (5) |
C1 | 0.0086 (8) | 0.0089 (8) | 0.0070 (8) | −0.0007 (6) | 0.0014 (6) | 0.0000 (6) |
C2 | 0.0080 (8) | 0.0114 (9) | 0.0129 (9) | 0.0002 (6) | 0.0010 (7) | −0.0018 (7) |
C3 | 0.0062 (8) | 0.0122 (9) | 0.0129 (8) | 0.0021 (6) | 0.0011 (7) | −0.0006 (7) |
C4 | 0.0072 (8) | 0.0157 (9) | 0.0123 (9) | 0.0018 (7) | 0.0014 (6) | −0.0001 (7) |
C5 | 0.0119 (8) | 0.0138 (9) | 0.0151 (9) | 0.0004 (7) | −0.0008 (7) | −0.0044 (7) |
C6 | 0.0134 (9) | 0.0185 (10) | 0.0114 (9) | 0.0018 (7) | 0.0020 (7) | 0.0002 (7) |
C7 | 0.0118 (8) | 0.0120 (9) | 0.0134 (9) | 0.0000 (7) | 0.0018 (7) | 0.0013 (7) |
N1 | 0.0082 (7) | 0.0096 (7) | 0.0150 (8) | −0.0005 (5) | 0.0022 (6) | 0.0008 (6) |
Geometric parameters (Å, º) top
K—O5i | 2.7283 (13) | C1—C2 | 1.542 (2) |
K—O2i | 2.7598 (13) | C2—H2A | 0.9800 |
K—O9ii | 2.7599 (14) | C2—H2B | 0.9800 |
K—O3iii | 2.8311 (13) | C2—C3 | 1.508 (2) |
K—O6iii | 2.8627 (14) | C3—C4 | 1.384 (3) |
K—O2 | 2.8996 (13) | C4—H4 | 0.9300 |
K—O1 | 2.9588 (13) | C4—N1 | 1.339 (2) |
P1—O1 | 1.5048 (12) | N1—H1 | 0.8600 |
P1—O2 | 1.4989 (13) | N1—C5 | 1.338 (2) |
P1—O3 | 1.5747 (13) | C5—H5 | 0.9300 |
P2—O4 | 1.5168 (13) | C5—C6 | 1.378 (3) |
P2—O5 | 1.4967 (13) | C6—H6 | 0.9300 |
P2—O6 | 1.5785 (14) | C6—C7 | 1.386 (3) |
P1—C1 | 1.8522 (17) | C7—H7 | 0.9300 |
P2—C1 | 1.8447 (16) | C3—C7 | 1.391 (2) |
O3—H3 | 0.792 (15) | O8—H8A | 0.813 (16) |
O6—H6A | 0.803 (16) | O8—H8B | 0.817 (16) |
C1—O7 | 1.434 (2) | O9—H9A | 0.824 (16) |
O7—H7A | 0.810 (15) | O9—H9B | 0.825 (16) |
| | | |
O5i—K—O2i | 72.73 (4) | O4—P2—O6 | 109.52 (7) |
O5i—K—O9ii | 73.20 (4) | O5—P2—C1 | 109.85 (7) |
O2i—K—O9ii | 79.83 (4) | O4—P2—C1 | 108.10 (7) |
O5i—K—O3iii | 139.12 (4) | O6—P2—C1 | 102.90 (7) |
O2i—K—O3iii | 84.96 (4) | P2—O6—H6A | 113.7 (17) |
O9ii—K—O3iii | 69.36 (4) | O7—C1—C2 | 106.16 (14) |
O5i—K—O6iii | 130.39 (4) | O7—C1—P2 | 109.74 (11) |
O2i—K—O6iii | 149.83 (4) | C2—C1—P2 | 109.26 (11) |
O9ii—K—O6iii | 88.69 (4) | O7—C1—P1 | 109.67 (11) |
O3iii—K—O6iii | 64.87 (4) | C2—C1—P1 | 106.70 (11) |
O5i—K—O2 | 83.93 (4) | P2—C1—P1 | 114.92 (9) |
O2i—K—O2 | 116.93 (5) | C3—C2—C1 | 115.64 (14) |
O9ii—K—O2 | 146.35 (4) | C3—C2—H2A | 108.4 |
O3iii—K—O2 | 136.94 (4) | C1—C2—H2A | 108.4 |
O6iii—K—O2 | 87.73 (4) | C3—C2—H2B | 108.4 |
O5i—K—O1 | 123.60 (4) | C1—C2—H2B | 108.4 |
O2i—K—O1 | 96.47 (4) | H2A—C2—H2B | 107.4 |
O9ii—K—O1 | 161.18 (4) | C4—C3—C7 | 117.46 (16) |
O3iii—K—O1 | 92.01 (4) | C4—C3—C2 | 121.69 (16) |
O6iii—K—O1 | 85.48 (4) | C7—C3—C2 | 120.84 (16) |
O2—K—O1 | 51.32 (3) | N1—C4—C3 | 121.09 (17) |
O5i—K—H9A | 94.2 (4) | N1—C4—H4 | 119.5 |
O2i—K—H9A | 36.3 (3) | C3—C4—H4 | 119.5 |
O9ii—K—H9A | 114.1 (4) | C5—N1—C4 | 122.02 (16) |
O3iii—K—H9A | 86.7 (4) | C5—N1—H1 | 119.0 |
O6iii—K—H9A | 134.9 (4) | C4—N1—H1 | 119.0 |
O2—K—H9A | 91.4 (4) | N1—C5—C6 | 119.73 (17) |
O1—K—H9A | 60.2 (3) | N1—C5—H5 | 120.1 |
O2—P1—O1 | 115.29 (7) | C6—C5—H5 | 120.1 |
O2—P1—O3 | 108.86 (7) | C5—C6—C7 | 119.22 (17) |
O1—P1—O3 | 110.16 (7) | C5—C6—H6 | 120.4 |
O2—P1—C1 | 109.17 (7) | C7—C6—H6 | 120.4 |
O1—P1—C1 | 108.22 (7) | C6—C7—C3 | 120.48 (17) |
O3—P1—C1 | 104.60 (7) | C6—C7—H7 | 119.8 |
P1—O1—K | 95.41 (6) | C3—C7—H7 | 119.8 |
P1—O2—K | 97.96 (6) | C1—O7—H7A | 109.3 (16) |
P1—O3—H3 | 112.0 (17) | H8A—O8—H8B | 103 (2) |
O5—P2—O4 | 114.23 (7) | H9A—O9—H9B | 106 (2) |
O5—P2—O6 | 111.58 (8) | | |
| | | |
O7—C1—C2—C3 | 66.90 (18) | C1—C2—C3—C4 | −73.4 (2) |
P1—C1—C2—C3 | −176.18 (12) | C1—C2—C3—C7 | 108.02 (19) |
P2—C1—C2—C3 | −51.38 (18) | | |
Symmetry codes: (i) x+1/2, −y+1/2, z+1/2; (ii) x+1/2, −y+1/2, z−1/2; (iii) x+1, y, z. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O4iv | 0.86 | 1.74 | 2.599 (2) | 173 |
O3—H3···O5v | 0.79 (2) | 1.81 (2) | 2.5633 (17) | 160 (2) |
O6—H6A···O9vi | 0.80 (2) | 1.77 (2) | 2.5631 (17) | 169 (2) |
O7—H7A···O8v | 0.81 (2) | 1.96 (2) | 2.712 (2) | 155 (2) |
O8—H8A···O1vi | 0.81 (2) | 1.96 (2) | 2.7725 (18) | 176 (2) |
O8—H8B···O4 | 0.82 (2) | 1.95 (2) | 2.7638 (18) | 173 (2) |
O9—H9A···O2i | 0.82 (2) | 1.83 (2) | 2.6454 (19) | 174 (2) |
O9—H9B···O1 | 0.83 (2) | 1.89 (2) | 2.7074 (17) | 172 (2) |
Symmetry codes: (i) x+1/2, −y+1/2, z+1/2; (iv) −x, −y, −z+1; (v) x, y, z+1; (vi) x−1, y, z−1. |
Experimental details
| (I) | (II) |
Crystal data |
Chemical formula | NH4+·C7H10NO7P2−·2H2O | K+·C7H10NO7P2−·2H2O |
Mr | 336.17 | 357.23 |
Crystal system, space group | Monoclinic, P21/n | Monoclinic, P21/n |
Temperature (K) | 118 | 118 |
a, b, c (Å) | 10.0911 (6), 12.2790 (7), 11.1598 (7) | 6.5356 (4), 28.1606 (17), 6.9636 (4) |
β (°) | 104.240 (1) | 95.993 (1) |
V (Å3) | 1340.31 (14) | 1274.62 (13) |
Z | 4 | 4 |
Radiation type | Mo Kα | Mo Kα |
µ (mm−1) | 0.37 | 0.71 |
Crystal size (mm) | 0.28 × 0.14 × 0.04 | 0.18 × 0.12 × 0.10 |
|
Data collection |
Diffractometer | Bruker SMART APEX diffractometer | Bruker SMART APEX diffractometer |
Absorption correction | – | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 17561, 3965, 3279 | 9075, 3052, 2644 |
Rint | 0.076 | 0.064 |
(sin θ/λ)max (Å−1) | 0.724 | 0.661 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.048, 0.111, 1.10 | 0.034, 0.088, 1.01 |
No. of reflections | 3965 | 3052 |
No. of parameters | 214 | 202 |
No. of restraints | 11 | 7 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.69, −0.33 | 0.76, −0.47 |
Selected bond lengths (Å) for (I) topP1—O1 | 1.5105 (14) | C1—C2 | 1.552 (3) |
P1—O2 | 1.5150 (15) | C2—C3 | 1.508 (3) |
P1—O3 | 1.5614 (15) | C3—C4 | 1.383 (3) |
P1—C1 | 1.8554 (19) | C3—C7 | 1.391 (3) |
P2—O5 | 1.5036 (14) | C4—N1 | 1.348 (3) |
P2—O4 | 1.5087 (14) | C5—N1 | 1.339 (3) |
P2—O6 | 1.5839 (15) | C5—C6 | 1.369 (3) |
P2—C1 | 1.8378 (19) | C6—C7 | 1.396 (3) |
O7—C1 | 1.434 (2) | | |
Hydrogen-bond geometry (Å, º) for (I) top
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H3···O5i | 0.826 (16) | 1.684 (17) | 2.510 (2) | 177 (3) |
O6—H6A···O2 | 0.816 (16) | 1.887 (19) | 2.656 (2) | 157 (3) |
O7—H7A···O8i | 0.85 (3) | 2.01 (3) | 2.818 (2) | 158 (2) |
N1—H1···O9 | 0.86 | 1.88 | 2.690 (2) | 156.6 |
N2—H2C···O1 | 0.906 (16) | 1.976 (17) | 2.854 (2) | 163 (2) |
N2—H2D···O8ii | 0.885 (16) | 2.124 (16) | 3.009 (2) | 178 (2) |
N2—H2E···O4iii | 0.896 (16) | 2.036 (17) | 2.923 (2) | 171 (2) |
N2—H2F···O2iv | 0.948 (16) | 1.830 (17) | 2.768 (2) | 170 (2) |
O8—H8A···O1v | 0.815 (16) | 2.069 (17) | 2.867 (2) | 166 (3) |
O8—H8B···O4 | 0.824 (16) | 1.880 (18) | 2.684 (2) | 165 (3) |
O9—H9A···O4iv | 0.810 (17) | 2.012 (19) | 2.785 (2) | 159 (3) |
O9—H9B···O1vi | 0.841 (17) | 1.908 (18) | 2.738 (2) | 169 (3) |
Symmetry codes: (i) x−1/2, −y+3/2, z−1/2; (ii) x+1/2, −y+3/2, z−1/2; (iii) −x+1/2, y+1/2, −z+1/2; (iv) x+1/2, −y+3/2, z+1/2; (v) −x+1/2, y−1/2, −z+1/2; (vi) x, y, z+1. |
Selected bond lengths (Å) for (II) topK—O5i | 2.7283 (13) | P2—O6 | 1.5785 (14) |
K—O2i | 2.7598 (13) | P1—C1 | 1.8522 (17) |
K—O9ii | 2.7599 (14) | P2—C1 | 1.8447 (16) |
K—O3iii | 2.8311 (13) | C1—O7 | 1.434 (2) |
K—O6iii | 2.8627 (14) | C1—C2 | 1.542 (2) |
K—O2 | 2.8996 (13) | C2—C3 | 1.508 (2) |
K—O1 | 2.9588 (13) | C3—C4 | 1.384 (3) |
P1—O1 | 1.5048 (12) | C4—N1 | 1.339 (2) |
P1—O2 | 1.4989 (13) | N1—C5 | 1.338 (2) |
P1—O3 | 1.5747 (13) | C5—C6 | 1.378 (3) |
P2—O4 | 1.5168 (13) | C6—C7 | 1.386 (3) |
P2—O5 | 1.4967 (13) | C3—C7 | 1.391 (2) |
Symmetry codes: (i) x+1/2, −y+1/2, z+1/2; (ii) x+1/2, −y+1/2, z−1/2; (iii) x+1, y, z. |
Hydrogen-bond geometry (Å, º) for (II) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O4iv | 0.86 | 1.74 | 2.599 (2) | 173 |
O3—H3···O5v | 0.792 (15) | 1.805 (17) | 2.5633 (17) | 160 (2) |
O6—H6A···O9vi | 0.803 (16) | 1.770 (16) | 2.5631 (17) | 169 (2) |
O7—H7A···O8v | 0.810 (15) | 1.955 (17) | 2.712 (2) | 155 (2) |
O8—H8A···O1vi | 0.813 (16) | 1.960 (17) | 2.7725 (18) | 176 (2) |
O8—H8B···O4 | 0.817 (16) | 1.952 (16) | 2.7638 (18) | 173 (2) |
O9—H9A···O2i | 0.824 (16) | 1.825 (17) | 2.6454 (19) | 174 (2) |
O9—H9B···O1 | 0.825 (16) | 1.887 (16) | 2.7074 (17) | 172 (2) |
Symmetry codes: (i) x+1/2, −y+1/2, z+1/2; (iv) −x, −y, −z+1; (v) x, y, z+1; (vi) x−1, y, z−1. |
Comparison of torsion angles (°) in (I), (II) and related compounds top | O7-C1-C2-C3 | C1-C2-C3-C4 |
(I) | 58.1 (2) | 109.7 (2) |
(II) | 66.90 (18) | -73.4 (2) |
C7H11NO7P2·H2Oa | -59.3 (5) | 83.2 (5) |
C7H11NO7P2·H2Ob | -59.8 (4) | 82.9 (4) |
[Na(C7H10NO7P2)]·2H2Ob | -53.9 (3) | -97.2 (3) |
[Na(C7H10NO7P2)]·2.5H2Ob | 67.23 (8) | -68.20 (10) |
Notes: (a) Barbey & Lecouvey (2002) [113 (2) K]. (b) Gossman et al. (2003) [193 (2) K]. |
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Many bisphosphonates are effective drugs for a number of bone disorders, for example osteoporosis (Rodan & Martin, 2000). In addition, bisphosphonates have shown promising antiparasitic activity (Martin et al., 2001). In a search for stable salts suitable for pharmaceutical preparations, the title compounds, (I) and (II), were synthesized and their crystal structures are presented here.
The bond distances and angles of the risedronate anions in (I) and (II) are very similar and also compare well with the values previously obtained for other crystal structures containing risedronate (risedronate monohydrate, sodium risedronate dihydrate and sodium risedronate 2.5-hydrate; Barbey & Lecouvey, 2002; Gossman et al., 2003). As noted earlier (Gossman et al., 2003), the P1—O3 and P2—O6 bonds are significantly longer [1.5614 (15)–1.5839 (15) Å] than the remaining P—O distances [1.4967 (13)–1.5168 (13) Å] because of the H atoms bonded to O3 and O6. A comparison of the O7—C1—C2—C3 and C1—C2—C3—C4 torsion angles gives additional information on the risedronate conformations (Table 5). In all the previously known structures, the ring plane is oriented approximately perpendicular to the phosphonate group (C1—C2—C3—C4 ≈ ±90°). This suggests that this general conformation is independent of crystal packing forces, although if the pyridinium ring is rotated by 180° atom N1 can still be positioned in the direction most favourable for hydrogen bonding. In the structure of (I) and risedronate monohydrate, this rotation is opposite to what is observed in the structures containing alkali metal ions. The O7—C1—C2—C3 torsion angles also fall into two distinct groups, with values of ±60°. In this conformation, one of the bulky phosphonate groups will always be opposite to the pyridinium ring. The sign of O7—C1—C2—C3 is probably governed by the hydrogen-bonding pattern in the crystal, as suggested for C1—C2—C3—C4, but there is no obvious correlation between them.
In both structures, the hydrogen bonds formed by the H atoms of the phosphonate groups and H1 (bonded to the pyridinium atom N1) are much stronger [D···A 2.510 (2)–2.690 (2) Å] than the remaining O—H···O bonds [D···A 2.6454 (19)–2.867 (2) Å]. The N—H···O bonds formed by the ammonium ion in (I) are even weaker [D···A 2.768 (2)–3.009 (2) Å]. While all hydrogen donors are involved in hydrogen bonds, the potential acceptors O3, O6 and O7 are not. This can be understood from the lack of hydrogen donors and the fact that forming few shorter bonds is, in general, energetically favourable to forming more bonds of average length.
In (I), the ammonium ions are connected via hydrogen bonds to water and phosponate O atoms (Table 2). The ammonium coordination tetrahedra are connected through the phosphonate groups into a three-dimensional network (Fig. 3). The intramolecular O6—H6A···O2 hydrogen bond found in (I) is not present in any of the known risedronate structures. This interaction locks the relative rotation of the two phosphonate groups without affecting the overall conformation. Although atom O7 is not an acceptor for conventional hydrogen bonds, it takes part in three very weak interactions [D···A 2.997 (2)–3.077 (2) Å and D—H···A 113 (2)–118°]. The C2—H2B···O3vii [symmetry code: (vii) −x, 2 − y, −z] interaction with H···A = 2.27 Å and D—H···A = 161° is potentially an interesting weak hydrogen bond.
In (II), the K+ cation is seven-coordinated (Table 3) by water and phosphonate O atoms in a distorted capped trigonal prism. The coordination polyhedra are corner-sharing through O2, forming chains in the [101] direction. The chains are further connected through the phosphonate groups and hydrogen bonding into layers in the ac plane. Both water molecules are coordinated by K+ and involved in hydrogen bonding within and between the polyhedral chains. The layers are separated by the protruding pyridinium groups, which also connect the layers by N1—H11···O4i [symmetry code: (i) −x, −y, 1 − z] hydrogen bonds (Fig. 4). As observed for (I), no conventional hydrogen bonds are found to atom O3. However, this atom forms a very weak intramolecular O7—H7A···O3 hydrogen bond [D···A = 2.9725 (18) Å and D—H···A = 111.5 (17)°].