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In 1-(4-chloroanilinomethyl)-5-(4-chlorophenyl)-1,3,5-triazinane-2-thione, C
16H
16Cl
2N
4S, there are two independent molecules in the asymmetric unit which form inversion dimers
via two weak N—H
S hydrogen bonds. The dimers are then linked into
C(9)
C(14) chains by a C—H
S hydrogen bond and a C—H
Cl contact. In 1-(anilinomethyl)-5-phenyl-1,3,5-triazinane-2-thione, C
16H
18N
4S, molecules are linked into complex sheets
via a combination of N—H
S and C—H
π hydrogen bonds.
Supporting information
CCDC references: 686426; 686427
Brief details of the syntheses of the title compounds, (I) and (II), will be
reported elsewhere (Zhang et al., 2008). Crystals of (I) were obtained
by recrystallization from dimethyl sulfoxide. Spectroscopic analysis: 1H NMR
(DMSO, 400 MHz, δ, p.p.m.): 8.37 (s, 1H), 6.796–7.076 (m, 8H),
6.59 (t, J = 6.8 Hz, 1H), 5.20–5.19 (d, J = 6.8 Hz, 2H), 4.78 (s, 2H), 4.57 (s, 2H). Crystals of (II) were
obtained by recrystallization from acetonitrile. Spectroscopic analysis: 1H
NMR (DMSO, 400 MHz, δ, p.p.m.): 8.30 (s, 1H), 7.10–6.58 (m,
10H), 6.45 (t, J = 7.2 Hz, 1H), 5.23 (d, J = 6.8 Hz, 2H), 4.79 (s, 2H), 4.57 (s, 2H).
H atoms were placed in idealized positions and allowed to ride on their
respective parent atoms, with C—H = 0.98 Å and N—H = 0.86 Å, and with
Uiso(H) = 1.2Ueq(C,N).
For both compounds, data collection: SMART (Bruker, 1997); cell refinement: SMART (Bruker, 1997); data reduction: SAINT (Bruker, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).
(I) 5-(4-chlorophenyl)-1-[(4-chlorophenylanilino)methyl]-1,3,5-triazinane-2-thione
top
Crystal data top
C32H32Cl4N8S2 | F(000) = 760 |
Mr = 734.58 | Dx = 1.421 Mg m−3 |
Monoclinic, P21 | Mo Kα radiation, λ = 0.71073 Å |
a = 5.9271 (17) Å | Cell parameters from 2502 reflections |
b = 16.398 (5) Å | θ = 2.3–20.4° |
c = 17.864 (5) Å | µ = 0.50 mm−1 |
β = 98.468 (4)° | T = 291 K |
V = 1717.3 (9) Å3 | Block, yellow |
Z = 2 | 0.38 × 0.30 × 0.24 mm |
Data collection top
Bruker SMART CCD area-detector diffractometer | 6252 independent reflections |
Radiation source: fine-focus sealed tube | 3942 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.044 |
ϕ and ω scans | θmax = 25.5°, θmin = 2.3° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −7→7 |
Tmin = 0.832, Tmax = 0.889 | k = −19→19 |
13046 measured reflections | l = −21→21 |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.061 | H-atom parameters constrained |
wR(F2) = 0.165 | w = 1/[σ2(Fo2) + (0.0849P)2] where P = (Fo2 + 2Fc2)/3 |
S = 1.01 | (Δ/σ)max < 0.001 |
6252 reflections | Δρmax = 0.43 e Å−3 |
415 parameters | Δρmin = −0.27 e Å−3 |
1 restraint | Absolute structure: Flack (1983), with how many Friedel pairs? |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.00 (2) |
Crystal data top
C32H32Cl4N8S2 | V = 1717.3 (9) Å3 |
Mr = 734.58 | Z = 2 |
Monoclinic, P21 | Mo Kα radiation |
a = 5.9271 (17) Å | µ = 0.50 mm−1 |
b = 16.398 (5) Å | T = 291 K |
c = 17.864 (5) Å | 0.38 × 0.30 × 0.24 mm |
β = 98.468 (4)° | |
Data collection top
Bruker SMART CCD area-detector diffractometer | 6252 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 3942 reflections with I > 2σ(I) |
Tmin = 0.832, Tmax = 0.889 | Rint = 0.044 |
13046 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.061 | H-atom parameters constrained |
wR(F2) = 0.165 | Δρmax = 0.43 e Å−3 |
S = 1.01 | Δρmin = −0.27 e Å−3 |
6252 reflections | Absolute structure: Flack (1983), with how many Friedel pairs? |
415 parameters | Absolute structure parameter: 0.00 (2) |
1 restraint | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
S1 | 0.3766 (2) | 0.18079 (8) | 0.14371 (7) | 0.0568 (3) | |
Cl1 | −0.3002 (3) | 0.44557 (13) | −0.18697 (9) | 0.0955 (6) | |
Cl2 | 0.0826 (4) | 0.07668 (15) | −0.25984 (11) | 0.1131 (7) | |
N1 | 0.4912 (8) | 0.4340 (3) | 0.0629 (3) | 0.0659 (12) | |
N2 | 0.3528 (7) | 0.3422 (3) | 0.1495 (2) | 0.0563 (10) | |
H2D | 0.2424 | 0.3338 | 0.1748 | 0.068* | |
N3 | 0.6127 (6) | 0.2920 (3) | 0.0745 (2) | 0.0542 (11) | |
N4 | 0.7768 (8) | 0.2280 (3) | −0.0285 (3) | 0.0711 (13) | |
H4D | 0.8924 | 0.2502 | −0.0444 | 0.085* | |
C1 | −0.0625 (9) | 0.4441 (4) | −0.1154 (3) | 0.0681 (15) | |
C2 | −0.0398 (11) | 0.5015 (4) | −0.0594 (4) | 0.0716 (16) | |
H2 | −0.1468 | 0.5430 | −0.0600 | 0.086* | |
C3 | 0.1458 (10) | 0.4974 (3) | −0.0011 (4) | 0.0686 (16) | |
H3 | 0.1623 | 0.5370 | 0.0366 | 0.082* | |
C4 | 0.3051 (9) | 0.4352 (3) | 0.0014 (3) | 0.0577 (13) | |
C5 | 0.2854 (10) | 0.3791 (4) | −0.0596 (3) | 0.0659 (15) | |
H5 | 0.3953 | 0.3389 | −0.0610 | 0.079* | |
C6 | 0.1015 (11) | 0.3844 (4) | −0.1169 (3) | 0.0765 (17) | |
H6 | 0.0882 | 0.3475 | −0.1569 | 0.092* | |
C7 | 0.4206 (10) | 0.4268 (3) | 0.1380 (3) | 0.0652 (15) | |
H7A | 0.2935 | 0.4632 | 0.1416 | 0.078* | |
H7B | 0.5458 | 0.4421 | 0.1767 | 0.078* | |
C8 | 0.6743 (9) | 0.3775 (3) | 0.0589 (3) | 0.0632 (14) | |
H8A | 0.8048 | 0.3936 | 0.0952 | 0.076* | |
H8B | 0.7189 | 0.3803 | 0.0089 | 0.076* | |
C9 | 0.4539 (8) | 0.2766 (3) | 0.1225 (3) | 0.0500 (12) | |
C10 | 0.7658 (9) | 0.2292 (4) | 0.0528 (3) | 0.0635 (14) | |
H10A | 0.7147 | 0.1763 | 0.0679 | 0.076* | |
H10B | 0.9178 | 0.2384 | 0.0799 | 0.076* | |
C11 | 0.6103 (9) | 0.1928 (3) | −0.0812 (3) | 0.0601 (14) | |
C12 | 0.6426 (11) | 0.1928 (4) | −0.1581 (3) | 0.0791 (18) | |
H12 | 0.7701 | 0.2178 | −0.1727 | 0.095* | |
C13 | 0.4859 (13) | 0.1561 (5) | −0.2104 (4) | 0.091 (2) | |
H13 | 0.5130 | 0.1531 | −0.2603 | 0.110* | |
C14 | 0.2858 (11) | 0.1229 (4) | −0.1915 (3) | 0.0737 (16) | |
C15 | 0.2498 (10) | 0.1243 (4) | −0.1171 (3) | 0.0723 (16) | |
H15 | 0.1168 | 0.1023 | −0.1036 | 0.087* | |
C16 | 0.4118 (10) | 0.1583 (3) | −0.0628 (3) | 0.0662 (15) | |
H16 | 0.3874 | 0.1581 | −0.0125 | 0.079* | |
S2 | −0.0579 (2) | 0.33959 (9) | 0.26616 (8) | 0.0659 (4) | |
Cl3 | 0.5677 (4) | 0.02080 (16) | 0.59585 (13) | 0.1272 (8) | |
Cl4 | 0.2643 (4) | 0.34901 (18) | 0.68867 (10) | 0.1220 (8) | |
N5 | −0.1709 (8) | 0.0824 (3) | 0.3362 (3) | 0.0665 (12) | |
N6 | −0.0346 (7) | 0.1794 (3) | 0.2543 (2) | 0.0636 (12) | |
H6D | 0.0753 | 0.1898 | 0.2293 | 0.076* | |
N7 | −0.2895 (7) | 0.2236 (3) | 0.3309 (2) | 0.0608 (11) | |
N8 | −0.4706 (8) | 0.2758 (4) | 0.4348 (3) | 0.0875 (16) | |
H8D | −0.5985 | 0.2591 | 0.4464 | 0.105* | |
C17 | 0.3506 (12) | 0.0417 (5) | 0.5201 (4) | 0.0848 (19) | |
C18 | 0.3579 (12) | 0.0039 (4) | 0.4499 (4) | 0.0852 (19) | |
H18 | 0.4768 | −0.0313 | 0.4437 | 0.102* | |
C19 | 0.1902 (11) | 0.0191 (4) | 0.3913 (4) | 0.0735 (16) | |
H19 | 0.1960 | −0.0061 | 0.3450 | 0.088* | |
C20 | 0.0095 (10) | 0.0715 (4) | 0.3986 (3) | 0.0627 (14) | |
C21 | 0.0080 (13) | 0.1096 (5) | 0.4688 (3) | 0.088 (2) | |
H21 | −0.1077 | 0.1460 | 0.4755 | 0.106* | |
C22 | 0.1792 (13) | 0.0928 (5) | 0.5279 (4) | 0.095 (2) | |
H22 | 0.1754 | 0.1177 | 0.5744 | 0.114* | |
C23 | −0.1022 (11) | 0.0943 (4) | 0.2609 (3) | 0.0665 (16) | |
H23A | 0.0244 | 0.0586 | 0.2549 | 0.080* | |
H23B | −0.2284 | 0.0814 | 0.2217 | 0.080* | |
C24 | −0.1329 (8) | 0.2417 (3) | 0.2847 (3) | 0.0526 (14) | |
C25 | −0.3538 (9) | 0.1374 (4) | 0.3427 (3) | 0.0678 (16) | |
H25A | −0.3986 | 0.1319 | 0.3925 | 0.081* | |
H25B | −0.4841 | 0.1230 | 0.3055 | 0.081* | |
C26 | −0.4481 (10) | 0.2839 (5) | 0.3566 (3) | 0.0793 (18) | |
H26A | −0.3939 | 0.3384 | 0.3479 | 0.095* | |
H26B | −0.5972 | 0.2776 | 0.3265 | 0.095* | |
C27 | −0.2960 (10) | 0.2936 (4) | 0.4927 (3) | 0.0707 (16) | |
C28 | −0.3203 (12) | 0.2705 (5) | 0.5672 (3) | 0.0826 (18) | |
H28 | −0.4521 | 0.2441 | 0.5766 | 0.099* | |
C29 | −0.1503 (13) | 0.2869 (5) | 0.6256 (4) | 0.092 (2) | |
H29 | −0.1704 | 0.2727 | 0.6746 | 0.111* | |
C30 | 0.0509 (12) | 0.3240 (4) | 0.6138 (3) | 0.0811 (18) | |
C31 | 0.0752 (10) | 0.3484 (4) | 0.5414 (3) | 0.0783 (17) | |
H31 | 0.2067 | 0.3757 | 0.5331 | 0.094* | |
C32 | −0.0950 (9) | 0.3326 (4) | 0.4809 (3) | 0.0734 (16) | |
H32 | −0.0747 | 0.3480 | 0.4323 | 0.088* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
S1 | 0.0568 (7) | 0.0636 (8) | 0.0517 (7) | −0.0059 (6) | 0.0142 (6) | 0.0041 (7) |
Cl1 | 0.0847 (11) | 0.1269 (15) | 0.0714 (10) | −0.0115 (11) | 0.0000 (8) | 0.0259 (11) |
Cl2 | 0.1211 (17) | 0.1401 (18) | 0.0743 (13) | −0.0109 (13) | 0.0011 (11) | −0.0234 (11) |
N1 | 0.068 (3) | 0.065 (3) | 0.065 (3) | −0.007 (3) | 0.012 (2) | 0.008 (2) |
N2 | 0.066 (3) | 0.056 (3) | 0.050 (2) | −0.003 (2) | 0.018 (2) | −0.001 (2) |
N3 | 0.042 (2) | 0.068 (3) | 0.054 (2) | −0.002 (2) | 0.0110 (19) | 0.007 (2) |
N4 | 0.055 (3) | 0.099 (4) | 0.062 (3) | −0.010 (3) | 0.020 (2) | −0.001 (3) |
C1 | 0.066 (3) | 0.084 (4) | 0.054 (3) | 0.000 (3) | 0.008 (3) | 0.021 (3) |
C2 | 0.075 (4) | 0.063 (4) | 0.077 (4) | 0.008 (3) | 0.013 (3) | 0.014 (3) |
C3 | 0.083 (4) | 0.052 (3) | 0.072 (4) | −0.004 (3) | 0.015 (3) | −0.004 (3) |
C4 | 0.064 (3) | 0.054 (3) | 0.057 (3) | −0.001 (3) | 0.015 (3) | 0.013 (3) |
C5 | 0.078 (4) | 0.070 (4) | 0.051 (3) | 0.010 (3) | 0.013 (3) | 0.001 (3) |
C6 | 0.092 (4) | 0.083 (4) | 0.055 (4) | −0.013 (4) | 0.013 (3) | 0.006 (3) |
C7 | 0.074 (4) | 0.068 (4) | 0.053 (3) | −0.002 (3) | 0.008 (3) | 0.000 (3) |
C8 | 0.063 (3) | 0.065 (4) | 0.063 (3) | −0.012 (3) | 0.014 (3) | 0.005 (3) |
C9 | 0.045 (3) | 0.059 (3) | 0.045 (3) | −0.007 (2) | 0.003 (2) | 0.003 (2) |
C10 | 0.051 (3) | 0.089 (4) | 0.051 (3) | 0.003 (3) | 0.011 (2) | 0.007 (3) |
C11 | 0.056 (3) | 0.064 (4) | 0.063 (3) | 0.008 (3) | 0.017 (3) | 0.011 (3) |
C12 | 0.087 (4) | 0.099 (5) | 0.057 (4) | −0.014 (4) | 0.028 (3) | −0.005 (3) |
C13 | 0.112 (5) | 0.113 (6) | 0.052 (4) | −0.001 (4) | 0.023 (4) | 0.001 (4) |
C14 | 0.082 (4) | 0.074 (4) | 0.064 (4) | 0.002 (3) | 0.007 (3) | −0.003 (3) |
C15 | 0.063 (4) | 0.090 (4) | 0.064 (4) | −0.006 (3) | 0.009 (3) | 0.000 (3) |
C16 | 0.074 (4) | 0.075 (4) | 0.054 (3) | −0.003 (3) | 0.022 (3) | 0.001 (3) |
S2 | 0.0646 (9) | 0.0734 (9) | 0.0605 (9) | 0.0001 (8) | 0.0118 (7) | 0.0038 (8) |
Cl3 | 0.1155 (16) | 0.160 (2) | 0.0972 (16) | 0.0135 (15) | −0.0150 (12) | 0.0239 (14) |
Cl4 | 0.1150 (14) | 0.175 (2) | 0.0705 (11) | 0.0108 (15) | −0.0039 (10) | −0.0220 (13) |
N5 | 0.079 (3) | 0.071 (3) | 0.052 (3) | −0.009 (3) | 0.016 (3) | 0.002 (2) |
N6 | 0.069 (3) | 0.067 (3) | 0.060 (3) | 0.000 (3) | 0.025 (2) | 0.003 (3) |
N7 | 0.052 (3) | 0.072 (3) | 0.061 (3) | 0.007 (2) | 0.016 (2) | −0.004 (2) |
N8 | 0.064 (3) | 0.137 (5) | 0.065 (3) | −0.006 (3) | 0.023 (3) | −0.010 (3) |
C17 | 0.087 (5) | 0.091 (5) | 0.073 (5) | −0.003 (4) | −0.001 (4) | 0.020 (4) |
C18 | 0.092 (5) | 0.085 (5) | 0.081 (5) | 0.019 (4) | 0.020 (4) | 0.016 (4) |
C19 | 0.079 (4) | 0.075 (4) | 0.070 (4) | 0.006 (3) | 0.020 (3) | 0.001 (3) |
C20 | 0.068 (4) | 0.067 (3) | 0.055 (3) | −0.012 (3) | 0.015 (3) | 0.004 (3) |
C21 | 0.108 (5) | 0.100 (5) | 0.058 (4) | 0.023 (4) | 0.016 (4) | −0.001 (4) |
C22 | 0.107 (6) | 0.119 (6) | 0.057 (4) | 0.033 (5) | 0.004 (4) | −0.007 (4) |
C23 | 0.080 (4) | 0.079 (4) | 0.042 (3) | 0.001 (3) | 0.014 (3) | −0.003 (3) |
C24 | 0.043 (3) | 0.074 (4) | 0.040 (3) | 0.000 (3) | 0.006 (2) | 0.006 (2) |
C25 | 0.058 (4) | 0.090 (5) | 0.057 (4) | −0.007 (3) | 0.015 (3) | 0.008 (3) |
C26 | 0.058 (3) | 0.114 (5) | 0.068 (4) | 0.011 (3) | 0.013 (3) | −0.009 (4) |
C27 | 0.067 (4) | 0.082 (4) | 0.065 (4) | 0.006 (3) | 0.019 (3) | −0.014 (3) |
C28 | 0.089 (4) | 0.107 (5) | 0.056 (4) | −0.006 (4) | 0.026 (3) | 0.004 (4) |
C29 | 0.106 (5) | 0.099 (5) | 0.076 (5) | 0.018 (4) | 0.027 (4) | 0.004 (4) |
C30 | 0.086 (4) | 0.100 (5) | 0.055 (4) | 0.013 (4) | 0.005 (3) | −0.013 (3) |
C31 | 0.078 (4) | 0.093 (5) | 0.066 (4) | −0.005 (4) | 0.015 (3) | −0.002 (4) |
C32 | 0.067 (4) | 0.095 (4) | 0.061 (4) | −0.006 (3) | 0.017 (3) | −0.012 (3) |
Geometric parameters (Å, º) top
S1—C9 | 1.695 (5) | S2—C24 | 1.711 (5) |
Cl1—C1 | 1.757 (6) | Cl3—C17 | 1.757 (7) |
Cl2—C14 | 1.756 (6) | Cl4—C30 | 1.749 (6) |
N1—C8 | 1.437 (7) | N5—C25 | 1.427 (7) |
N1—C4 | 1.438 (7) | N5—C20 | 1.437 (7) |
N1—C7 | 1.468 (7) | N5—C23 | 1.475 (6) |
N2—C9 | 1.354 (6) | N6—C24 | 1.331 (6) |
N2—C7 | 1.468 (7) | N6—C23 | 1.461 (7) |
N2—H2D | 0.8600 | N6—H6D | 0.8600 |
N3—C9 | 1.386 (6) | N7—C24 | 1.362 (6) |
N3—C10 | 1.463 (7) | N7—C26 | 1.484 (7) |
N3—C8 | 1.485 (7) | N7—C25 | 1.487 (8) |
N4—C11 | 1.385 (7) | N8—C27 | 1.382 (7) |
N4—C10 | 1.464 (7) | N8—C26 | 1.428 (7) |
N4—H4D | 0.8600 | N8—H8D | 0.8600 |
C1—C2 | 1.365 (8) | C17—C22 | 1.340 (9) |
C1—C6 | 1.383 (8) | C17—C18 | 1.406 (10) |
C2—C3 | 1.401 (8) | C18—C19 | 1.357 (8) |
C2—H2 | 0.9300 | C18—H18 | 0.9300 |
C3—C4 | 1.385 (8) | C19—C20 | 1.394 (8) |
C3—H3 | 0.9300 | C19—H19 | 0.9300 |
C4—C5 | 1.418 (8) | C20—C21 | 1.403 (8) |
C5—C6 | 1.384 (8) | C21—C22 | 1.380 (9) |
C5—H5 | 0.9300 | C21—H21 | 0.9300 |
C6—H6 | 0.9300 | C22—H22 | 0.9300 |
C7—H7A | 0.9700 | C23—H23A | 0.9700 |
C7—H7B | 0.9700 | C23—H23B | 0.9700 |
C8—H8A | 0.9700 | C25—H25A | 0.9700 |
C8—H8B | 0.9700 | C25—H25B | 0.9700 |
C10—H10A | 0.9700 | C26—H26A | 0.9700 |
C10—H10B | 0.9700 | C26—H26B | 0.9700 |
C11—C16 | 1.388 (7) | C27—C32 | 1.395 (8) |
C11—C12 | 1.415 (8) | C27—C28 | 1.412 (8) |
C12—C13 | 1.358 (9) | C28—C29 | 1.366 (8) |
C12—H12 | 0.9300 | C28—H28 | 0.9300 |
C13—C14 | 1.391 (9) | C29—C30 | 1.382 (9) |
C13—H13 | 0.9300 | C29—H29 | 0.9300 |
C14—C15 | 1.377 (8) | C30—C31 | 1.381 (9) |
C15—C16 | 1.379 (8) | C31—C32 | 1.390 (8) |
C15—H15 | 0.9300 | C31—H31 | 0.9300 |
C16—H16 | 0.9300 | C32—H32 | 0.9300 |
| | | |
C8—N1—C4 | 118.1 (5) | C25—N5—C20 | 120.2 (5) |
C8—N1—C7 | 108.2 (4) | C25—N5—C23 | 107.8 (5) |
C4—N1—C7 | 114.2 (4) | C20—N5—C23 | 116.7 (5) |
C9—N2—C7 | 123.8 (4) | C24—N6—C23 | 124.0 (4) |
C9—N2—H2D | 118.1 | C24—N6—H6D | 118.0 |
C7—N2—H2D | 118.1 | C23—N6—H6D | 118.0 |
C9—N3—C10 | 122.7 (4) | C24—N7—C26 | 124.2 (5) |
C9—N3—C8 | 119.8 (4) | C24—N7—C25 | 120.4 (4) |
C10—N3—C8 | 115.8 (4) | C26—N7—C25 | 113.7 (5) |
C11—N4—C10 | 123.3 (4) | C27—N8—C26 | 123.0 (5) |
C11—N4—H4D | 118.4 | C27—N8—H8D | 118.5 |
C10—N4—H4D | 118.4 | C26—N8—H8D | 118.5 |
C2—C1—C6 | 120.6 (6) | C22—C17—C18 | 119.4 (6) |
C2—C1—Cl1 | 120.4 (5) | C22—C17—Cl3 | 121.5 (6) |
C6—C1—Cl1 | 119.1 (5) | C18—C17—Cl3 | 119.0 (6) |
C1—C2—C3 | 119.6 (6) | C19—C18—C17 | 119.5 (6) |
C1—C2—H2 | 120.2 | C19—C18—H18 | 120.2 |
C3—C2—H2 | 120.2 | C17—C18—H18 | 120.2 |
C4—C3—C2 | 121.1 (6) | C18—C19—C20 | 121.8 (6) |
C4—C3—H3 | 119.5 | C18—C19—H19 | 119.1 |
C2—C3—H3 | 119.5 | C20—C19—H19 | 119.1 |
C3—C4—C5 | 118.3 (5) | C19—C20—C21 | 117.7 (6) |
C3—C4—N1 | 118.5 (5) | C19—C20—N5 | 119.9 (5) |
C5—C4—N1 | 123.0 (5) | C21—C20—N5 | 122.4 (6) |
C6—C5—C4 | 119.6 (5) | C22—C21—C20 | 119.6 (6) |
C6—C5—H5 | 120.2 | C22—C21—H21 | 120.2 |
C4—C5—H5 | 120.2 | C20—C21—H21 | 120.2 |
C1—C6—C5 | 120.6 (6) | C17—C22—C21 | 122.0 (7) |
C1—C6—H6 | 119.7 | C17—C22—H22 | 119.0 |
C5—C6—H6 | 119.7 | C21—C22—H22 | 119.0 |
N1—C7—N2 | 109.0 (4) | N6—C23—N5 | 108.4 (4) |
N1—C7—H7A | 109.9 | N6—C23—H23A | 110.0 |
N2—C7—H7A | 109.9 | N5—C23—H23A | 110.0 |
N1—C7—H7B | 109.9 | N6—C23—H23B | 110.0 |
N2—C7—H7B | 109.9 | N5—C23—H23B | 110.0 |
H7A—C7—H7B | 108.3 | H23A—C23—H23B | 108.4 |
N1—C8—N3 | 113.0 (4) | N6—C24—N7 | 117.2 (4) |
N1—C8—H8A | 109.0 | N6—C24—S2 | 120.0 (4) |
N3—C8—H8A | 109.0 | N7—C24—S2 | 122.8 (4) |
N1—C8—H8B | 109.0 | N5—C25—N7 | 112.0 (4) |
N3—C8—H8B | 109.0 | N5—C25—H25A | 109.2 |
H8A—C8—H8B | 107.8 | N7—C25—H25A | 109.2 |
N2—C9—N3 | 116.9 (4) | N5—C25—H25B | 109.2 |
N2—C9—S1 | 120.5 (4) | N7—C25—H25B | 109.2 |
N3—C9—S1 | 122.5 (4) | H25A—C25—H25B | 107.9 |
N3—C10—N4 | 113.1 (4) | N8—C26—N7 | 113.3 (5) |
N3—C10—H10A | 109.0 | N8—C26—H26A | 108.9 |
N4—C10—H10A | 109.0 | N7—C26—H26A | 108.9 |
N3—C10—H10B | 109.0 | N8—C26—H26B | 108.9 |
N4—C10—H10B | 109.0 | N7—C26—H26B | 108.9 |
H10A—C10—H10B | 107.8 | H26A—C26—H26B | 107.7 |
N4—C11—C16 | 123.6 (5) | N8—C27—C32 | 123.0 (5) |
N4—C11—C12 | 118.3 (5) | N8—C27—C28 | 118.7 (6) |
C16—C11—C12 | 118.1 (5) | C32—C27—C28 | 118.3 (6) |
C13—C12—C11 | 119.5 (5) | C29—C28—C27 | 120.1 (6) |
C13—C12—H12 | 120.3 | C29—C28—H28 | 120.0 |
C11—C12—H12 | 120.3 | C27—C28—H28 | 120.0 |
C12—C13—C14 | 121.9 (6) | C28—C29—C30 | 121.7 (6) |
C12—C13—H13 | 119.1 | C28—C29—H29 | 119.1 |
C14—C13—H13 | 119.1 | C30—C29—H29 | 119.1 |
C15—C14—C13 | 119.1 (6) | C31—C30—C29 | 118.8 (6) |
C15—C14—Cl2 | 119.3 (5) | C31—C30—Cl4 | 119.0 (6) |
C13—C14—Cl2 | 121.5 (5) | C29—C30—Cl4 | 122.0 (6) |
C14—C15—C16 | 119.7 (6) | C30—C31—C32 | 120.6 (6) |
C14—C15—H15 | 120.2 | C30—C31—H31 | 119.7 |
C16—C15—H15 | 120.2 | C32—C31—H31 | 119.7 |
C15—C16—C11 | 121.7 (5) | C31—C32—C27 | 120.4 (6) |
C15—C16—H16 | 119.2 | C31—C32—H32 | 119.8 |
C11—C16—H16 | 119.2 | C27—C32—H32 | 119.8 |
| | | |
C6—C1—C2—C3 | −3.1 (8) | C22—C17—C18—C19 | −0.6 (10) |
Cl1—C1—C2—C3 | 177.3 (4) | Cl3—C17—C18—C19 | 179.5 (5) |
C1—C2—C3—C4 | −1.0 (8) | C17—C18—C19—C20 | 0.0 (10) |
C2—C3—C4—C5 | 4.5 (8) | C18—C19—C20—C21 | 1.1 (9) |
C2—C3—C4—N1 | −179.7 (5) | C18—C19—C20—N5 | −176.6 (5) |
C8—N1—C4—C3 | −170.4 (5) | C25—N5—C20—C19 | −178.6 (5) |
C7—N1—C4—C3 | 60.7 (6) | C23—N5—C20—C19 | −45.1 (7) |
C8—N1—C4—C5 | 5.2 (7) | C25—N5—C20—C21 | 3.9 (8) |
C7—N1—C4—C5 | −123.7 (5) | C23—N5—C20—C21 | 137.4 (6) |
C3—C4—C5—C6 | −4.1 (8) | C19—C20—C21—C22 | −1.6 (10) |
N1—C4—C5—C6 | −179.7 (5) | N5—C20—C21—C22 | 176.0 (6) |
C2—C1—C6—C5 | 3.5 (8) | C18—C17—C22—C21 | 0.1 (12) |
Cl1—C1—C6—C5 | −176.9 (4) | Cl3—C17—C22—C21 | 180.0 (6) |
C4—C5—C6—C1 | 0.2 (8) | C20—C21—C22—C17 | 1.0 (12) |
C8—N1—C7—N2 | −57.7 (5) | C24—N6—C23—N5 | −35.2 (7) |
C4—N1—C7—N2 | 76.0 (6) | C25—N5—C23—N6 | 58.5 (6) |
C9—N2—C7—N1 | 35.1 (6) | C20—N5—C23—N6 | −80.3 (6) |
C4—N1—C8—N3 | −75.0 (6) | C23—N6—C24—N7 | 6.9 (7) |
C7—N1—C8—N3 | 56.6 (6) | C23—N6—C24—S2 | −174.0 (4) |
C9—N3—C8—N1 | −29.8 (7) | C26—N7—C24—N6 | −167.0 (5) |
C10—N3—C8—N1 | 164.8 (4) | C25—N7—C24—N6 | −3.1 (7) |
C7—N2—C9—N3 | −7.3 (6) | C26—N7—C24—S2 | 14.0 (7) |
C7—N2—C9—S1 | 175.7 (4) | C25—N7—C24—S2 | 177.8 (4) |
C10—N3—C9—N2 | 168.0 (4) | C20—N5—C25—N7 | 80.1 (6) |
C8—N3—C9—N2 | 3.7 (6) | C23—N5—C25—N7 | −57.0 (6) |
C10—N3—C9—S1 | −15.1 (6) | C24—N7—C25—N5 | 29.9 (7) |
C8—N3—C9—S1 | −179.4 (4) | C26—N7—C25—N5 | −164.7 (4) |
C9—N3—C10—N4 | 133.4 (5) | C27—N8—C26—N7 | 68.6 (8) |
C8—N3—C10—N4 | −61.7 (6) | C24—N7—C26—N8 | −137.5 (5) |
C11—N4—C10—N3 | −78.8 (7) | C25—N7—C26—N8 | 57.7 (7) |
C10—N4—C11—C16 | 2.9 (8) | C26—N8—C27—C32 | 10.0 (10) |
C10—N4—C11—C12 | −177.9 (5) | C26—N8—C27—C28 | −169.1 (6) |
N4—C11—C12—C13 | 177.6 (6) | N8—C27—C28—C29 | 179.7 (6) |
C16—C11—C12—C13 | −3.1 (9) | C32—C27—C28—C29 | 0.5 (10) |
C11—C12—C13—C14 | 4.3 (11) | C27—C28—C29—C30 | −1.8 (11) |
C12—C13—C14—C15 | −2.7 (11) | C28—C29—C30—C31 | 3.0 (11) |
C12—C13—C14—Cl2 | 179.2 (5) | C28—C29—C30—Cl4 | 177.3 (6) |
C13—C14—C15—C16 | 0.0 (10) | C29—C30—C31—C32 | −3.0 (10) |
Cl2—C14—C15—C16 | 178.1 (5) | Cl4—C30—C31—C32 | −177.4 (5) |
C14—C15—C16—C11 | 1.1 (9) | C30—C31—C32—C27 | 1.8 (10) |
N4—C11—C16—C15 | 179.7 (6) | N8—C27—C32—C31 | −179.6 (6) |
C12—C11—C16—C15 | 0.5 (8) | C28—C27—C32—C31 | −0.5 (9) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N6—H6D···S1 | 0.86 | 2.52 | 3.356 (4) | 164 |
N2—H2D···S2 | 0.86 | 2.59 | 3.430 (4) | 167 |
C2—H2···S1i | 0.93 | 2.93 | 3.743 (4) | 147 |
C23—H23A···Cl1ii | 0.97 | 2.86 | 3.783 (7) | 160 |
Symmetry codes: (i) −x, y+1/2, −z; (ii) −x, y−1/2, −z. |
(II) 1-(anilinomethyl)-5-phenyl-1,3,5-triazinane-2-thione
top
Crystal data top
C16H18N4S | Z = 4 |
Mr = 298.40 | F(000) = 632 |
Mmnoclinic, P21/n | Dx = 1.266 Mg m−3 |
a = 5.8564 (8) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 15.486 (2) Å | Cell parameters from 2761 reflections |
c = 17.285 (2) Å | θ = 2.4–22.8° |
α = 90° | µ = 0.21 mm−1 |
β = 92.660 (2)° | T = 291 K |
γ = 90° | Plate, colourless |
V = 1565.9 (4) Å3 | 0.35 × 0.27 × 0.21 mm |
Data collection top
Bruker SMART CCD area-detector diffractometer | 2895 independent reflections |
Radiation source: fine-focus sealed tube | 2151 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.027 |
ϕ and ω scans | θmax = 25.5°, θmin = 2.4° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −7→7 |
Tmin = 0.931, Tmax = 0.957 | k = −18→18 |
11424 measured reflections | l = −20→20 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.036 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.094 | H-atom parameters constrained |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0374P)2 + 0.3074P] where P = (Fo2 + 2Fc2)/3 |
2895 reflections | (Δ/σ)max = 0.002 |
190 parameters | Δρmax = 0.16 e Å−3 |
0 restraints | Δρmin = −0.13 e Å−3 |
Crystal data top
C16H18N4S | γ = 90° |
Mr = 298.40 | V = 1565.9 (4) Å3 |
Mmnoclinic, P21/n | Z = 4 |
a = 5.8564 (8) Å | Mo Kα radiation |
b = 15.486 (2) Å | µ = 0.21 mm−1 |
c = 17.285 (2) Å | T = 291 K |
α = 90° | 0.35 × 0.27 × 0.21 mm |
β = 92.660 (2)° | |
Data collection top
Bruker SMART CCD area-detector diffractometer | 2895 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 2151 reflections with I > 2σ(I) |
Tmin = 0.931, Tmax = 0.957 | Rint = 0.027 |
11424 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.036 | 0 restraints |
wR(F2) = 0.094 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.16 e Å−3 |
2895 reflections | Δρmin = −0.13 e Å−3 |
190 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
S1 | 0.22985 (8) | 0.04923 (3) | 0.40760 (3) | 0.06091 (17) | |
N1 | 0.4078 (3) | 0.19555 (10) | 0.62536 (8) | 0.0560 (4) | |
N2 | 0.2185 (2) | 0.08151 (9) | 0.55677 (9) | 0.0564 (4) | |
H2D | 0.0937 | 0.0522 | 0.5534 | 0.068* | |
N3 | 0.5076 (2) | 0.15073 (9) | 0.49676 (8) | 0.0505 (4) | |
N4 | 0.7175 (2) | 0.25134 (11) | 0.41977 (9) | 0.0671 (5) | |
H4D | 0.8443 | 0.2714 | 0.4394 | 0.081* | |
C1 | 0.2573 (3) | 0.26732 (12) | 0.61505 (10) | 0.0526 (4) | |
C2 | 0.1013 (4) | 0.28340 (14) | 0.67104 (12) | 0.0714 (6) | |
H2 | 0.0976 | 0.2473 | 0.7140 | 0.086* | |
C3 | −0.0480 (4) | 0.35158 (15) | 0.66442 (14) | 0.0846 (7) | |
H3 | −0.1523 | 0.3609 | 0.7025 | 0.102* | |
C4 | −0.0442 (4) | 0.40607 (15) | 0.60187 (15) | 0.0842 (7) | |
H4 | −0.1463 | 0.4520 | 0.5970 | 0.101* | |
C5 | 0.1116 (4) | 0.39195 (14) | 0.54692 (13) | 0.0789 (6) | |
H5 | 0.1170 | 0.4292 | 0.5048 | 0.095* | |
C6 | 0.2615 (4) | 0.32305 (12) | 0.55290 (11) | 0.0660 (5) | |
H6 | 0.3660 | 0.3142 | 0.5147 | 0.079* | |
C7 | 0.2990 (3) | 0.11240 (12) | 0.63295 (11) | 0.0611 (5) | |
H7A | 0.1710 | 0.1175 | 0.6663 | 0.073* | |
H7B | 0.4070 | 0.0715 | 0.6563 | 0.073* | |
C8 | 0.3280 (3) | 0.09623 (11) | 0.49175 (10) | 0.0500 (4) | |
C9 | 0.5885 (3) | 0.18639 (13) | 0.57241 (11) | 0.0600 (5) | |
H9A | 0.7054 | 0.1487 | 0.5953 | 0.072* | |
H9B | 0.6575 | 0.2424 | 0.5644 | 0.072* | |
C10 | 0.6659 (3) | 0.16269 (13) | 0.43371 (12) | 0.0628 (5) | |
H10A | 0.8069 | 0.1320 | 0.4467 | 0.075* | |
H10B | 0.5986 | 0.1375 | 0.3866 | 0.075* | |
C11 | 0.5767 (3) | 0.30742 (13) | 0.37660 (10) | 0.0556 (5) | |
C12 | 0.6523 (4) | 0.39069 (14) | 0.36228 (12) | 0.0684 (5) | |
H12 | 0.7944 | 0.4086 | 0.3825 | 0.082* | |
C13 | 0.5180 (4) | 0.44710 (15) | 0.31820 (13) | 0.0800 (6) | |
H13 | 0.5701 | 0.5028 | 0.3091 | 0.096* | |
C14 | 0.3077 (4) | 0.42155 (17) | 0.28758 (13) | 0.0814 (7) | |
H14 | 0.2185 | 0.4592 | 0.2571 | 0.098* | |
C15 | 0.2316 (4) | 0.33993 (16) | 0.30271 (11) | 0.0722 (6) | |
H15 | 0.0888 | 0.3227 | 0.2826 | 0.087* | |
C16 | 0.3617 (3) | 0.28265 (14) | 0.34710 (10) | 0.0602 (5) | |
H16 | 0.3060 | 0.2278 | 0.3572 | 0.072* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
S1 | 0.0506 (3) | 0.0659 (3) | 0.0662 (3) | −0.0021 (2) | 0.0021 (2) | −0.0129 (2) |
N1 | 0.0554 (9) | 0.0586 (9) | 0.0533 (9) | −0.0008 (7) | −0.0048 (7) | 0.0016 (7) |
N2 | 0.0481 (8) | 0.0604 (10) | 0.0603 (9) | −0.0071 (7) | −0.0004 (7) | 0.0018 (8) |
N3 | 0.0387 (7) | 0.0554 (9) | 0.0573 (9) | 0.0010 (7) | 0.0009 (6) | −0.0005 (7) |
N4 | 0.0408 (8) | 0.0756 (11) | 0.0843 (12) | −0.0085 (8) | −0.0033 (8) | 0.0129 (9) |
C1 | 0.0562 (10) | 0.0546 (11) | 0.0466 (10) | −0.0046 (9) | −0.0020 (8) | −0.0044 (8) |
C2 | 0.0842 (15) | 0.0706 (14) | 0.0605 (12) | 0.0006 (12) | 0.0162 (11) | 0.0049 (10) |
C3 | 0.0909 (17) | 0.0792 (16) | 0.0865 (16) | 0.0073 (13) | 0.0339 (13) | −0.0057 (13) |
C4 | 0.0913 (17) | 0.0668 (14) | 0.0953 (17) | 0.0192 (12) | 0.0132 (14) | −0.0051 (13) |
C5 | 0.1086 (18) | 0.0606 (13) | 0.0683 (14) | 0.0173 (12) | 0.0122 (13) | 0.0068 (10) |
C6 | 0.0826 (14) | 0.0614 (12) | 0.0549 (11) | 0.0079 (11) | 0.0139 (10) | 0.0005 (10) |
C7 | 0.0652 (12) | 0.0601 (12) | 0.0572 (11) | 0.0008 (10) | −0.0035 (9) | 0.0088 (9) |
C8 | 0.0377 (9) | 0.0490 (10) | 0.0630 (11) | 0.0074 (7) | −0.0008 (8) | 0.0001 (8) |
C9 | 0.0478 (10) | 0.0632 (12) | 0.0678 (12) | −0.0014 (9) | −0.0109 (9) | −0.0008 (10) |
C10 | 0.0427 (10) | 0.0678 (13) | 0.0785 (13) | 0.0081 (9) | 0.0084 (9) | 0.0011 (10) |
C11 | 0.0479 (10) | 0.0701 (13) | 0.0496 (10) | 0.0035 (9) | 0.0095 (8) | −0.0008 (9) |
C12 | 0.0636 (12) | 0.0751 (14) | 0.0669 (13) | −0.0027 (11) | 0.0080 (10) | 0.0003 (11) |
C13 | 0.0957 (18) | 0.0714 (14) | 0.0736 (14) | 0.0086 (13) | 0.0126 (13) | 0.0041 (12) |
C14 | 0.0906 (17) | 0.0925 (18) | 0.0606 (13) | 0.0291 (14) | −0.0012 (12) | 0.0036 (12) |
C15 | 0.0625 (13) | 0.0984 (18) | 0.0553 (12) | 0.0145 (12) | −0.0022 (10) | −0.0073 (12) |
C16 | 0.0527 (11) | 0.0771 (13) | 0.0509 (10) | 0.0024 (10) | 0.0043 (8) | −0.0035 (9) |
Geometric parameters (Å, º) top
S1—C8 | 1.7025 (18) | C5—C6 | 1.383 (3) |
N1—C1 | 1.424 (2) | C5—H5 | 0.9300 |
N1—C9 | 1.438 (2) | C6—H6 | 0.9300 |
N1—C7 | 1.445 (2) | C7—H7A | 0.9700 |
N2—C8 | 1.339 (2) | C7—H7B | 0.9700 |
N2—C7 | 1.458 (2) | C9—H9A | 0.9700 |
N2—H2D | 0.8600 | C9—H9B | 0.9700 |
N3—C8 | 1.348 (2) | C10—H10A | 0.9700 |
N3—C10 | 1.475 (2) | C10—H10B | 0.9700 |
N3—C9 | 1.477 (2) | C11—C12 | 1.389 (3) |
N4—C11 | 1.391 (2) | C11—C16 | 1.390 (2) |
N4—C10 | 1.428 (2) | C12—C13 | 1.381 (3) |
N4—H4D | 0.8600 | C12—H12 | 0.9300 |
C1—C6 | 1.379 (2) | C13—C14 | 1.376 (3) |
C1—C2 | 1.384 (3) | C13—H13 | 0.9300 |
C2—C3 | 1.372 (3) | C14—C15 | 1.369 (3) |
C2—H2 | 0.9300 | C14—H14 | 0.9300 |
C3—C4 | 1.372 (3) | C15—C16 | 1.379 (3) |
C3—H3 | 0.9300 | C15—H15 | 0.9300 |
C4—C5 | 1.365 (3) | C16—H16 | 0.9300 |
C4—H4 | 0.9300 | | |
| | | |
C1—N1—C9 | 117.8 (2) | H7A—C7—H7B | 108.2 |
C1—N1—C7 | 115.7 (2) | N2—C8—N3 | 117.1 (2) |
C9—N1—C7 | 108.1 (2) | N2—C8—S1 | 119.2 (1) |
C8—N2—C7 | 123.7 (2) | N3—C8—S1 | 123.7 (1) |
C8—N2—H2D | 118.2 | N1—C9—N3 | 112.6 (1) |
C7—N2—H2D | 118.2 | N1—C9—H9A | 109.1 |
C8—N3—C10 | 123.1 (2) | N3—C9—H9A | 109.1 |
C8—N3—C9 | 120.6 (2) | N1—C9—H9B | 109.1 |
C10—N3—C9 | 114.9 (1) | N3—C9—H9B | 109.1 |
C11—N4—C10 | 124.5 (2) | H9A—C9—H9B | 107.8 |
C11—N4—H4D | 117.8 | N4—C10—N3 | 113.0 (2) |
C10—N4—H4D | 117.8 | N4—C10—H10A | 109.0 |
C6—C1—C2 | 117.9 (2) | N3—C10—H10A | 109.0 |
C6—C1—N1 | 123.5 (2) | N4—C10—H10B | 109.0 |
C2—C1—N1 | 118.5 (2) | N3—C10—H10B | 109.0 |
C3—C2—C1 | 121.3 (2) | H10A—C10—H10B | 107.8 |
C3—C2—H2 | 119.4 | C12—C11—C16 | 118.8 (2) |
C1—C2—H2 | 119.4 | C12—C11—N4 | 119.3 (2) |
C2—C3—C4 | 120.3 (2) | C16—C11—N4 | 121.9 (2) |
C2—C3—H3 | 119.8 | C13—C12—C11 | 120.5 (2) |
C4—C3—H3 | 119.8 | C13—C12—H12 | 119.8 |
C5—C4—C3 | 119.0 (2) | C11—C12—H12 | 119.8 |
C5—C4—H4 | 120.5 | C14—C13—C12 | 120.5 (2) |
C3—C4—H4 | 120.5 | C14—C13—H13 | 119.8 |
C4—C5—C6 | 121.0 (2) | C12—C13—H13 | 119.8 |
C4—C5—H5 | 119.5 | C15—C14—C13 | 119.0 (2) |
C6—C5—H5 | 119.5 | C15—C14—H14 | 120.5 |
C1—C6—C5 | 120.4 (2) | C13—C14—H14 | 120.5 |
C1—C6—H6 | 119.8 | C14—C15—C16 | 121.6 (2) |
C5—C6—H6 | 119.8 | C14—C15—H15 | 119.2 |
N1—C7—N2 | 109.6 (1) | C16—C15—H15 | 119.2 |
N1—C7—H7A | 109.7 | C15—C16—C11 | 119.6 (2) |
N2—C7—H7A | 109.7 | C15—C16—H16 | 120.2 |
N1—C7—H7B | 109.7 | C11—C16—H16 | 120.2 |
N2—C7—H7B | 109.7 | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2D···S1i | 0.86 | 2.57 | 3.394 (2) | 160 |
C2—H2···Cgii | 0.93 | 2.87 | 3.765 (2) | 163 |
Symmetry codes: (i) −x, −y, −z+1; (ii) x−3/2, −y−1/2, z−1/2. |
Experimental details
| (I) | (II) |
Crystal data |
Chemical formula | C32H32Cl4N8S2 | C16H18N4S |
Mr | 734.58 | 298.40 |
Crystal system, space group | Monoclinic, P21 | Mmnoclinic, P21/n |
Temperature (K) | 291 | 291 |
a, b, c (Å) | 5.9271 (17), 16.398 (5), 17.864 (5) | 5.8564 (8), 15.486 (2), 17.285 (2) |
α, β, γ (°) | 90, 98.468 (4), 90 | 90, 92.660 (2), 90 |
V (Å3) | 1717.3 (9) | 1565.9 (4) |
Z | 2 | 4 |
Radiation type | Mo Kα | Mo Kα |
µ (mm−1) | 0.50 | 0.21 |
Crystal size (mm) | 0.38 × 0.30 × 0.24 | 0.35 × 0.27 × 0.21 |
|
Data collection |
Diffractometer | Bruker SMART CCD area-detector diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.832, 0.889 | 0.931, 0.957 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 13046, 6252, 3942 | 11424, 2895, 2151 |
Rint | 0.044 | 0.027 |
(sin θ/λ)max (Å−1) | 0.606 | 0.606 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.061, 0.165, 1.01 | 0.036, 0.094, 1.03 |
No. of reflections | 6252 | 2895 |
No. of parameters | 415 | 190 |
No. of restraints | 1 | 0 |
H-atom treatment | H-atom parameters constrained | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.43, −0.27 | 0.16, −0.13 |
Absolute structure | Flack (1983), with how many Friedel pairs? | ? |
Absolute structure parameter | 0.00 (2) | ? |
Selected geometric parameters (Å, º) for (I) topN1—C8 | 1.437 (7) | C15—C16 | 1.379 (8) |
N1—C4 | 1.438 (7) | N5—C20 | 1.437 (7) |
N1—C7 | 1.468 (7) | N6—C24 | 1.331 (6) |
N2—C9 | 1.354 (6) | N7—C24 | 1.362 (6) |
N3—C9 | 1.386 (6) | N8—C27 | 1.382 (7) |
N4—C11 | 1.385 (7) | C17—C22 | 1.340 (9) |
C1—C2 | 1.365 (8) | C17—C18 | 1.406 (10) |
C1—C6 | 1.383 (8) | C18—C19 | 1.357 (8) |
C2—C3 | 1.401 (8) | C19—C20 | 1.394 (8) |
C3—C4 | 1.385 (8) | C20—C21 | 1.403 (8) |
C4—C5 | 1.418 (8) | C21—C22 | 1.380 (9) |
C5—C6 | 1.384 (8) | C27—C32 | 1.395 (8) |
C11—C16 | 1.388 (7) | C27—C28 | 1.412 (8) |
C11—C12 | 1.415 (8) | C28—C29 | 1.366 (8) |
C12—C13 | 1.358 (9) | C29—C30 | 1.382 (9) |
C13—C14 | 1.391 (9) | C30—C31 | 1.381 (9) |
C14—C15 | 1.377 (8) | | |
| | | |
C8—N1—C4 | 118.1 (5) | C25—N5—C20 | 120.2 (5) |
C8—N1—C7 | 108.2 (4) | C25—N5—C23 | 107.8 (5) |
C4—N1—C7 | 114.2 (4) | C20—N5—C23 | 116.7 (5) |
Hydrogen-bond geometry (Å, º) for (I) top
D—H···A | D—H | H···A | D···A | D—H···A |
N6—H6D···S1 | 0.86 | 2.52 | 3.356 (4) | 164.2 |
N2—H2D···S2 | 0.86 | 2.59 | 3.430 (4) | 166.8 |
C2—H2···S1i | 0.93 | 2.93 | 3.743 (4) | 146.6 |
C23—H23A···Cl1ii | 0.97 | 2.86 | 3.783 (7) | 160 |
Symmetry codes: (i) −x, y+1/2, −z; (ii) −x, y−1/2, −z. |
Selected geometric parameters (Å, º) for (II) topN1—C1 | 1.424 (2) | N3—C8 | 1.348 (2) |
N2—C8 | 1.339 (2) | N4—C11 | 1.391 (2) |
| | | |
C1—N1—C9 | 117.8 (2) | C8—N3—C10 | 123.1 (2) |
C1—N1—C7 | 115.7 (2) | C8—N3—C9 | 120.6 (2) |
C9—N1—C7 | 108.1 (2) | C10—N3—C9 | 114.9 (1) |
Hydrogen-bond geometry (Å, º) for (II) top
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2D···S1i | 0.86 | 2.57 | 3.394 (2) | 159.7 |
C2—H2···Cgii | 0.93 | 2.87 | 3.765 (2) | 162.5 |
Symmetry codes: (i) −x, −y, −z+1; (ii) x−3/2, −y−1/2, z−1/2. |
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Heterocyclic compounds containing the thiourea structural unit have been found to have powerful bioactivity, such as powerful ectoparasiticidal action (Enders et al., 1979), potent antidiabetic properties (Lenzen & Ahmad, 2001) and anti-HIV activity (Lam et al., 1994; Acharya et al., 2001). In addition, some of these compounds can serve as calcium channel blockers, antihypertensive agents and α-1a-antagonists (Atwal et al. 1990). Therefore, it is not surprising that the search for new methods to synthesize heterocyclic compounds starting from thiourea has received special attention. Burke and Petersen gave early reports of synthetic studies of 5-alkyl- or 4,6-dialkyl-substituted 1,3,5-triazinane-2-thiones (Burke, 1947; Petersen, 1973). In our research to develop new routes to diversely substituted 1,3,5-triazinane-2-thiones, several novel 1,5-disubstituted 1,3,5-triazinane-2-thiones have been synthesized by a one-pot three-component condensation of thiourea, aniline and formaldehyde (Zhang et al., 2008). We report here the molecular and supramolecular structures of two such compounds, namely 5-(4-chlorophenyl)-1-[(4-chlorophenylanilino)methyl]-1,3,5-triazinane-2-thione, (I), and 5-phenyl-1-[(phenylamino)methyl]-1,3,5-triazinane-2-thione, (II) (Figs. 1 and 2).
Compound (I) crystallizes with Z' = 2 in the space group P21 and the molecular geometries of the two independent molecules, (Ia) and (Ib) (Fig. 1), are very similar. The triazinane-2-thione rings adopt envelope conformations; atoms N1 and N5 are the flap atoms, displaced by 0.652 and 0.665 Å, respectively, from the planes of the other five atoms. The conformations of the two heterocyclic structural units and the coplanarity of the S1/C9/N2/N3/C7/C8 and S2/C24/N6/N7/C23/C25 fragments in (Ia) and (Ib) are similar to the situation found in other cyclic thiones (Zhang, Zhang et al., 2007; Pavlović et al., 2000).
The intramolecular geometries in molecules (Ia) and (Ib) present some unexpected features. Within the aryl rings, the C12—C13, C18—C19 and C17—C22 bonds are significantly shorter than those found in similar structural units [1.373 (3)–1.398 (3) Å; Zhang, Qin et al., 2007], while the C2—C3, C4—C5, C11—C12, C27—C28, C17—C18 and C20—C21 bonds all are longer than the remainder (Table 1). Within the two heterocyclic rings, the N3—C9 and N7—C24 bonds are significantly longer than the N2—C9 and N6—C24 bonds, respectively. In addition, both the N1—C4 and N5—C20 bonds are significantly longer than the N4—C11 and N8—C27 bonds. For the N1—C4 and N5—C20 bonds, these large differences in bond length are probably due to the different hybridized states between atoms N1 and N4, N5 and N8, N2 and N3 or N6 and N7. This can be confirmed by the fact that the sums of the interbond angles at atoms N1 and N5 deviate by 20 and 15°, respectively, from 360°, indicating that these two atoms have sp3 character, although they are bonded to the corresponding phenyl rings.
Interestingly, all the molecules for (Ia), (Ib) and (II) adopt cis conformations (Figs. 1 and 2); the phenyl and phenylanilinomethyl groups lie on the same sides of the heterocycle and the dihedral angles between the two aromatic rings in (Ia), (Ib) and (II) are 71.13, 67.35 and 71.89°, respectively, indicating that these benzene rings are nearly perpendicular to one another.
In (II), the heterocycle adopts an envelope conformation; atom N1 is the flap atom, displaced by 0.637 Å from the plane of the other five atoms. The C1—N1 bond is significantly longer than the C11—N4 bond (Table 1). The sum of the three angles around atom N1 is 341.61 (6)° (Table 1), which is significantly smaller than those around atoms N2, N3 or N4. These three features for (II) are similar to the situation in (I).
Within the selected asymmetric unit of (I), the two independent molecules are linked by two weak N—H···S hydrogen bonds (Fig. 1 and Table 2), forming an R22(8) (Bernstein et al., 1995) dimer centred at (1/6, 1/4, 1/5). Dimers of this type are further linked by two weak intermolecular interactions [a C—H···S hydrogen bond and a C—H···Cl contact (Table 2)] to form a zigzag chain (Fig. 3). Aromatic ring atom C2 and atom Cl1 in the dimeric unit at (x, y, z) act as hydrogen-bond donors and form intermolecular contacts to, respectively, thiocarbonyl atom S1 and atom H23A in the molecule at (-x, y + 1/2, -z) (Table 2), so generating by inversion a C(9)C(14) chain of R22(8) rings along the [010] direction (Fig. 3). Two such chains pass through each unit cell, and they are related to one another by propagation and hence parallel. There are no direction-specific interactions between the two chains.
In compound (II) (Fig. 2 and Table 3), the molecules are linked into sheets of considerable complexity by two hydrogen bonds, one of N—H···S type and one of C—H···π(arene) type (Table 4). However, the two-dimensional structure is readily analysed in terms of two relatively simple one-dimensional substructures. In the first substructure, atom N2 in the molecule at (x, y, z) acts as a hydrogen-bond donor to atom S1 in the molecule at (-x, -y, -z + 1), so generating by inversion a dimer centred at (0, 0, 1/2) and characterized by the usual R22(8) motif (Fig. 1) [Should this not rather refer to Fig. 4 or 5?]. The dimer can be regarded as the backone building unit, from which the first substructure is built by only one C—H···π hydrogen bond. Atom C2 in the molecule at (x, y, z), part of the dimer at (0, 0, 1/2), acts as hydrogen-bond donor to the C11–C16 ring in the molecule at (-1/2 + x, 1/2 - y, 1/2 + z), which is part of the dimer centred at (-1/2, 1/2, 1). Propagation by inversion then generates a C22(8) chain along (-1/4, y, 3/4) (Fig. 4). In the second substructure, atom C2 in the molecule at (x, y, z) acts as hydrogen-bond donor to the C11–C16 ring in the molecule at (x - 1/2, -y + 1/2, z + 1/2), so forming a hydrogen-bonded chain running along the [101] direction and generated by a 21 screw axis along [101] (Fig. 5). The combination of these two chain motifs is sufficient to link all the molecules into a two-demensional sheet parallel to [101]. Two such sheets pass through each unit cell, in the domains 0 < x < 1, 0 < z < 1 and 1 < x < 2, 1 < z < 2, and there are no direction-specific interactions between the two sheets.