Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S0108270108032472/hj3088sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S0108270108032472/hj3088Isup2.hkl |
CCDC reference: 682507
For related literature, see: Bonnett (1995); Cui et al. (2007); Deneux et al. (1985); Kadish et al. (2003); Kobayashi et al. (1968, 1971); Kubiak et al. (2007); Lukyanets (1999); Mckeown (1998); Milgrom (1977); Nitschke et al. (2004); Ogunsipe et al. (2003); Pauling (1960); Tabata et al. (2000); Torre et al. (2001); Yslas et al. (2005); Zeng et al. (2005).
Pure zinc(II) phthalocyanine was prepared according to the procedure of Kobayashi et al. (1968). ZnPc powder was reacted with 4-aminopyridine (2:3 molar ratio) in THF solution at about 338 K for 6 h. When the solvent was evaporated slowly at room temperature, violet crystals were obtained in various sizes.
All H atoms bound to C and N atoms of the ZnPc(4-ap) unit were located in difference Fourier syntheses and refined. The H atoms of THF solvent molecules were refined as riding, with C—H = 0.97Å and Uiso(H) = 1.2Ueq(C). One THF molecule (C42–C46/O2A–O2E) was disordered and treated statistically with the site-occupancy factors of the C atoms at each of the five sites equal to 0.8 and the site-occupancy factors of the O atoms to equal 0.2.
Data collection: CrystalClear (Rigaku, 2007); cell refinement: CrystalClear (Rigaku, 2007); data reduction: CrystalClear (Rigaku, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEX (McArdle, 1995); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).
[Zn(C32H16N8)(C5H6N2)]·2C4H8O | F(000) = 1696 |
Mr = 816.22 | Dx = 1.405 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71069 Å |
Hall symbol: -p2ybc | Cell parameters from 11377 reflections |
a = 13.5385 (17) Å | θ = 3.1–27.5° |
b = 15.0756 (19) Å | µ = 0.69 mm−1 |
c = 19.224 (3) Å | T = 298 K |
β = 100.420 (3)° | Block, purple |
V = 3858.9 (9) Å3 | 0.72 × 0.70 × 0.20 mm |
Z = 4 |
Rigaku Saturn 724 CCD area-detector diffractometer | 8842 independent reflections |
Radiation source: Sealed Tube | 8208 reflections with I > 2σ(I) |
Graphite Monochromator monochromator | Rint = 0.028 |
Detector resolution: 28.5714 pixels mm-1 | θmax = 27.5°, θmin = 3.1° |
dtprofit.ref scans | h = −17→17 |
Absorption correction: numerical (NUMABS; Higashi, 2000) | k = −19→15 |
Tmin = 0.636, Tmax = 0.874 | l = −24→24 |
30133 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.044 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.121 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0691P)2 + 1.4255P] where P = (Fo2 + 2Fc2)/3 |
8842 reflections | (Δ/σ)max < 0.001 |
611 parameters | Δρmax = 0.37 e Å−3 |
0 restraints | Δρmin = −0.44 e Å−3 |
[Zn(C32H16N8)(C5H6N2)]·2C4H8O | V = 3858.9 (9) Å3 |
Mr = 816.22 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 13.5385 (17) Å | µ = 0.69 mm−1 |
b = 15.0756 (19) Å | T = 298 K |
c = 19.224 (3) Å | 0.72 × 0.70 × 0.20 mm |
β = 100.420 (3)° |
Rigaku Saturn 724 CCD area-detector diffractometer | 8842 independent reflections |
Absorption correction: numerical (NUMABS; Higashi, 2000) | 8208 reflections with I > 2σ(I) |
Tmin = 0.636, Tmax = 0.874 | Rint = 0.028 |
30133 measured reflections |
R[F2 > 2σ(F2)] = 0.044 | 0 restraints |
wR(F2) = 0.121 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | Δρmax = 0.37 e Å−3 |
8842 reflections | Δρmin = −0.44 e Å−3 |
611 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Zn1 | 0.494339 (15) | 0.814615 (13) | 0.007637 (10) | 0.03414 (8) | |
N1 | 0.60057 (11) | 0.89636 (10) | 0.06164 (8) | 0.0366 (3) | |
N2 | 0.49768 (12) | 0.98717 (10) | 0.12432 (8) | 0.0371 (3) | |
N3 | 0.39134 (12) | 0.89932 (10) | 0.03483 (8) | 0.0368 (3) | |
N4 | 0.24176 (12) | 0.84110 (11) | −0.04029 (8) | 0.0396 (3) | |
N5 | 0.38907 (12) | 0.77725 (10) | −0.07659 (8) | 0.0375 (3) | |
N6 | 0.49267 (13) | 0.69864 (11) | −0.14683 (9) | 0.0411 (3) | |
N7 | 0.59833 (12) | 0.77482 (10) | −0.05010 (8) | 0.0377 (3) | |
N8 | 0.74782 (12) | 0.83266 (11) | 0.02523 (9) | 0.0398 (3) | |
N9 | 0.49501 (13) | 0.70958 (11) | 0.07882 (8) | 0.0394 (3) | |
N10 | 0.50518 (17) | 0.49473 (13) | 0.21647 (10) | 0.0494 (4) | |
H1 | 0.6517 (19) | 0.6260 (17) | −0.2210 (14) | 0.055 (7)* | |
H2 | 0.824 (3) | 0.607 (2) | −0.219 (2) | 0.098 (11)* | |
H3 | 0.948 (3) | 0.658 (2) | −0.1287 (19) | 0.096 (11)* | |
H4 | 0.9000 (19) | 0.7376 (17) | −0.0362 (14) | 0.052 (7)* | |
H5 | 0.904 (2) | 0.9301 (18) | 0.1226 (15) | 0.064 (8)* | |
H6 | 0.956 (2) | 1.0338 (19) | 0.2076 (14) | 0.059 (7)* | |
H7 | 0.836 (2) | 1.1111 (18) | 0.2594 (14) | 0.062 (7)* | |
H8 | 0.6617 (18) | 1.0850 (15) | 0.2224 (13) | 0.049 (6)* | |
H9 | 0.3413 (18) | 1.0897 (15) | 0.1806 (13) | 0.047 (6)* | |
H10 | 0.1682 (19) | 1.1180 (18) | 0.1749 (14) | 0.059 (7)* | |
H11 | 0.042 (2) | 1.0512 (19) | 0.0915 (16) | 0.071 (8)* | |
H12 | 0.0845 (19) | 0.9411 (16) | 0.0155 (14) | 0.052 (6)* | |
H13 | 0.087 (2) | 0.7601 (19) | −0.1469 (15) | 0.065 (8)* | |
H14 | 0.034 (3) | 0.680 (2) | −0.250 (2) | 0.091 (11)* | |
H15 | 0.156 (2) | 0.6099 (19) | −0.3072 (16) | 0.069 (8)* | |
H16 | 0.326 (2) | 0.6251 (18) | −0.2585 (15) | 0.064 (8)* | |
H18 | 0.4943 (19) | 0.607 (2) | 0.0078 (15) | 0.070 (9)* | |
H19 | 0.510 (2) | 0.4937 (18) | 0.0836 (17) | 0.071 (9)* | |
H20 | 0.504 (2) | 0.6622 (19) | 0.2484 (16) | 0.066 (8)* | |
H21 | 0.4953 (17) | 0.7831 (17) | 0.1657 (13) | 0.049 (6)* | |
H22 | 0.5053 (18) | 0.4447 (19) | 0.1987 (14) | 0.052 (7)* | |
H23 | 0.5023 (19) | 0.5051 (14) | 0.2583 (15) | 0.043 (6)* | |
C1 | 0.58133 (15) | 0.72320 (12) | −0.10938 (10) | 0.0390 (4) | |
C2 | 0.67786 (16) | 0.69605 (13) | −0.12667 (12) | 0.0451 (4) | |
C3 | 0.75222 (15) | 0.73163 (13) | −0.07361 (11) | 0.0440 (4) | |
C4 | 0.69970 (14) | 0.78330 (13) | −0.02784 (10) | 0.0385 (4) | |
C5 | 0.70146 (13) | 0.88605 (12) | 0.06430 (9) | 0.0365 (4) | |
C6 | 0.75602 (14) | 0.94474 (13) | 0.11841 (10) | 0.0391 (4) | |
C7 | 0.68352 (15) | 0.99013 (12) | 0.14787 (9) | 0.0380 (4) | |
C8 | 0.58565 (14) | 0.95808 (12) | 0.11073 (9) | 0.0361 (4) | |
C9 | 0.40856 (14) | 0.96048 (12) | 0.08796 (9) | 0.0361 (4) | |
C10 | 0.31258 (15) | 0.99527 (12) | 0.10078 (10) | 0.0383 (4) | |
C11 | 0.23774 (14) | 0.95227 (13) | 0.05241 (10) | 0.0388 (4) | |
C12 | 0.29005 (14) | 0.89225 (12) | 0.01157 (9) | 0.0372 (4) | |
C13 | 0.28828 (14) | 0.79021 (13) | −0.08109 (10) | 0.0381 (4) | |
C14 | 0.23424 (15) | 0.74082 (13) | −0.14152 (10) | 0.0430 (4) | |
C15 | 0.30755 (16) | 0.70100 (14) | −0.17432 (11) | 0.0437 (4) | |
C16 | 0.40432 (15) | 0.72503 (12) | −0.13171 (9) | 0.0387 (4) | |
C17 | 0.7034 (2) | 0.64863 (18) | −0.18321 (15) | 0.0634 (7) | |
C18 | 0.8045 (2) | 0.6356 (2) | −0.18268 (18) | 0.0789 (9) | |
C19 | 0.8781 (2) | 0.6678 (2) | −0.12830 (19) | 0.0745 (9) | |
C20 | 0.85346 (19) | 0.71677 (17) | −0.07302 (15) | 0.0576 (6) | |
C21 | 0.85777 (16) | 0.96046 (16) | 0.13991 (11) | 0.0468 (5) | |
C22 | 0.88577 (18) | 1.02301 (17) | 0.19271 (12) | 0.0531 (5) | |
C23 | 0.81376 (18) | 1.06793 (15) | 0.22266 (11) | 0.0522 (5) | |
C24 | 0.71187 (17) | 1.05294 (14) | 0.20101 (11) | 0.0455 (4) | |
C25 | 0.28706 (17) | 1.05824 (14) | 0.14744 (11) | 0.0454 (4) | |
C26 | 0.18597 (18) | 1.07645 (16) | 0.14411 (12) | 0.0519 (5) | |
C27 | 0.11215 (17) | 1.03436 (17) | 0.09559 (12) | 0.0514 (5) | |
C28 | 0.13663 (16) | 0.97115 (16) | 0.04904 (11) | 0.0468 (4) | |
C29 | 0.13270 (18) | 0.73232 (16) | −0.16919 (13) | 0.0536 (5) | |
C30 | 0.1063 (2) | 0.68400 (18) | −0.23102 (17) | 0.0683 (7) | |
C31 | 0.1791 (2) | 0.6457 (2) | −0.26458 (15) | 0.0712 (8) | |
C32 | 0.2801 (2) | 0.65378 (18) | −0.23701 (13) | 0.0584 (6) | |
C33 | 0.49547 (16) | 0.72070 (13) | 0.14844 (10) | 0.0420 (4) | |
C34 | 0.49830 (16) | 0.65237 (14) | 0.19593 (10) | 0.0428 (4) | |
C35 | 0.50135 (14) | 0.56446 (13) | 0.17249 (10) | 0.0390 (4) | |
C36 | 0.5012 (2) | 0.55329 (14) | 0.10033 (11) | 0.0518 (5) | |
C37 | 0.4983 (2) | 0.62568 (15) | 0.05711 (11) | 0.0522 (5) | |
O1 | 0.9274 (3) | 0.6289 (3) | 0.1933 (2) | 0.1560 (15) | |
C38 | 0.8636 (4) | 0.6944 (3) | 0.1720 (4) | 0.147 (2) | |
H38A | 0.8839 | 0.7261 | 0.1329 | 0.177* | |
H38B | 0.8622 | 0.7359 | 0.2103 | 0.177* | |
C39 | 0.7646 (4) | 0.6545 (5) | 0.1495 (5) | 0.187 (4) | |
H39A | 0.7254 | 0.6578 | 0.1870 | 0.224* | |
H39B | 0.7281 | 0.6842 | 0.1080 | 0.224* | |
C40 | 0.7848 (5) | 0.5645 (6) | 0.1340 (5) | 0.216 (4) | |
H40A | 0.7473 | 0.5243 | 0.1589 | 0.259* | |
H40B | 0.7667 | 0.5532 | 0.0836 | 0.259* | |
C41 | 0.8897 (5) | 0.5539 (5) | 0.1575 (5) | 0.208 (4) | |
H41A | 0.9023 | 0.5027 | 0.1884 | 0.250* | |
H41B | 0.9225 | 0.5443 | 0.1173 | 0.250* | |
C42 | 0.0725 (5) | 0.6335 (7) | 0.0275 (5) | 0.206 (4) | 0.80 |
H42A | 0.0092 | 0.6206 | 0.0424 | 0.247* | 0.80 |
H42B | 0.0584 | 0.6532 | −0.0213 | 0.247* | 0.80 |
C43 | 0.1259 (9) | 0.5667 (8) | 0.0331 (9) | 0.380 (11) | 0.80 |
H43A | 0.1232 | 0.5418 | −0.0137 | 0.456* | 0.80 |
H43B | 0.0971 | 0.5233 | 0.0609 | 0.456* | 0.80 |
C44 | 0.2250 (6) | 0.5784 (7) | 0.0634 (8) | 0.289 (6) | 0.80 |
H44A | 0.2683 | 0.5740 | 0.0285 | 0.346* | 0.80 |
H44B | 0.2463 | 0.5354 | 0.1007 | 0.346* | 0.80 |
C45 | 0.2252 (5) | 0.6685 (6) | 0.0920 (4) | 0.185 (3) | 0.80 |
H45A | 0.2425 | 0.6688 | 0.1432 | 0.222* | 0.80 |
H45B | 0.2712 | 0.7069 | 0.0727 | 0.222* | 0.80 |
C46 | 0.1209 (5) | 0.6945 (4) | 0.0675 (6) | 0.199 (4) | 0.80 |
H46A | 0.0887 | 0.7045 | 0.1080 | 0.239* | 0.80 |
H46B | 0.1188 | 0.7496 | 0.0412 | 0.239* | 0.80 |
O2A | 0.0725 (5) | 0.6335 (7) | 0.0275 (5) | 0.206 (4) | 0.20 |
O2B | 0.1259 (9) | 0.5667 (8) | 0.0331 (9) | 0.380 (11) | 0.20 |
O2C | 0.2250 (6) | 0.5784 (7) | 0.0634 (8) | 0.289 (6) | 0.20 |
O2D | 0.2252 (5) | 0.6685 (6) | 0.0920 (4) | 0.185 (3) | 0.20 |
O2E | 0.1209 (5) | 0.6945 (4) | 0.0675 (6) | 0.199 (4) | 0.20 |
U11 | U22 | U33 | U12 | U13 | U23 | |
Zn1 | 0.03702 (13) | 0.03550 (13) | 0.03001 (12) | −0.00072 (7) | 0.00635 (8) | −0.00258 (7) |
N1 | 0.0385 (8) | 0.0379 (8) | 0.0341 (7) | −0.0023 (6) | 0.0079 (6) | −0.0028 (6) |
N2 | 0.0427 (8) | 0.0374 (8) | 0.0312 (7) | −0.0009 (6) | 0.0068 (6) | −0.0014 (6) |
N3 | 0.0400 (8) | 0.0370 (8) | 0.0334 (7) | 0.0013 (6) | 0.0063 (6) | −0.0027 (6) |
N4 | 0.0405 (8) | 0.0418 (8) | 0.0359 (8) | −0.0017 (7) | 0.0052 (6) | −0.0016 (6) |
N5 | 0.0415 (8) | 0.0401 (8) | 0.0304 (7) | −0.0017 (6) | 0.0052 (6) | −0.0039 (6) |
N6 | 0.0495 (9) | 0.0410 (8) | 0.0336 (8) | −0.0022 (7) | 0.0097 (7) | −0.0057 (6) |
N7 | 0.0410 (8) | 0.0416 (8) | 0.0315 (7) | −0.0018 (6) | 0.0092 (6) | −0.0038 (6) |
N8 | 0.0395 (8) | 0.0433 (8) | 0.0377 (8) | −0.0020 (6) | 0.0099 (6) | −0.0018 (6) |
N9 | 0.0497 (9) | 0.0368 (7) | 0.0321 (7) | −0.0015 (7) | 0.0084 (6) | 0.0008 (6) |
N10 | 0.0706 (13) | 0.0404 (10) | 0.0377 (9) | −0.0017 (8) | 0.0111 (9) | 0.0041 (7) |
C1 | 0.0476 (10) | 0.0365 (9) | 0.0351 (8) | −0.0016 (7) | 0.0136 (7) | −0.0036 (7) |
C2 | 0.0495 (11) | 0.0423 (10) | 0.0475 (11) | −0.0049 (8) | 0.0191 (9) | −0.0078 (8) |
C3 | 0.0472 (10) | 0.0407 (10) | 0.0477 (10) | −0.0014 (8) | 0.0182 (8) | −0.0051 (8) |
C4 | 0.0402 (9) | 0.0400 (9) | 0.0371 (9) | 0.0001 (7) | 0.0119 (7) | 0.0003 (7) |
C5 | 0.0383 (9) | 0.0385 (9) | 0.0331 (8) | −0.0053 (7) | 0.0077 (7) | 0.0007 (7) |
C6 | 0.0429 (9) | 0.0413 (9) | 0.0331 (8) | −0.0079 (7) | 0.0069 (7) | 0.0014 (7) |
C7 | 0.0443 (10) | 0.0381 (9) | 0.0311 (8) | −0.0077 (7) | 0.0056 (7) | 0.0011 (7) |
C8 | 0.0429 (9) | 0.0352 (9) | 0.0307 (8) | −0.0041 (7) | 0.0081 (7) | −0.0009 (6) |
C9 | 0.0435 (9) | 0.0346 (9) | 0.0309 (8) | 0.0026 (7) | 0.0088 (7) | 0.0000 (6) |
C10 | 0.0443 (10) | 0.0379 (9) | 0.0334 (8) | 0.0048 (7) | 0.0088 (7) | 0.0027 (7) |
C11 | 0.0416 (9) | 0.0414 (9) | 0.0344 (8) | 0.0042 (7) | 0.0091 (7) | 0.0034 (7) |
C12 | 0.0401 (9) | 0.0400 (9) | 0.0316 (8) | 0.0018 (7) | 0.0072 (7) | 0.0022 (7) |
C13 | 0.0407 (9) | 0.0391 (9) | 0.0336 (8) | −0.0035 (7) | 0.0045 (7) | 0.0001 (7) |
C14 | 0.0476 (10) | 0.0391 (9) | 0.0398 (9) | −0.0050 (8) | 0.0012 (8) | −0.0023 (7) |
C15 | 0.0490 (11) | 0.0415 (10) | 0.0386 (10) | −0.0017 (8) | 0.0025 (8) | −0.0038 (8) |
C16 | 0.0478 (10) | 0.0364 (9) | 0.0310 (8) | −0.0017 (7) | 0.0050 (7) | −0.0024 (7) |
C17 | 0.0639 (15) | 0.0660 (15) | 0.0673 (15) | −0.0122 (12) | 0.0307 (12) | −0.0283 (13) |
C18 | 0.0701 (17) | 0.0806 (19) | 0.097 (2) | −0.0120 (14) | 0.0456 (16) | −0.0448 (17) |
C19 | 0.0558 (14) | 0.0710 (17) | 0.107 (2) | −0.0051 (12) | 0.0417 (16) | −0.0308 (16) |
C20 | 0.0488 (12) | 0.0564 (13) | 0.0714 (16) | −0.0033 (10) | 0.0211 (11) | −0.0130 (12) |
C21 | 0.0445 (10) | 0.0541 (12) | 0.0421 (10) | −0.0114 (9) | 0.0089 (8) | 0.0004 (9) |
C22 | 0.0502 (12) | 0.0636 (13) | 0.0440 (11) | −0.0214 (10) | 0.0046 (9) | −0.0006 (10) |
C23 | 0.0632 (13) | 0.0518 (12) | 0.0401 (10) | −0.0207 (10) | 0.0050 (9) | −0.0062 (9) |
C24 | 0.0558 (12) | 0.0422 (10) | 0.0388 (9) | −0.0105 (9) | 0.0093 (8) | −0.0054 (8) |
C25 | 0.0550 (12) | 0.0439 (10) | 0.0380 (9) | 0.0067 (9) | 0.0099 (9) | −0.0028 (8) |
C26 | 0.0601 (13) | 0.0534 (12) | 0.0451 (11) | 0.0164 (10) | 0.0173 (10) | 0.0000 (9) |
C27 | 0.0464 (11) | 0.0608 (13) | 0.0495 (11) | 0.0136 (10) | 0.0153 (9) | 0.0058 (10) |
C28 | 0.0431 (10) | 0.0557 (12) | 0.0419 (10) | 0.0054 (9) | 0.0089 (8) | 0.0038 (9) |
C29 | 0.0455 (11) | 0.0537 (13) | 0.0582 (13) | −0.0059 (9) | 0.0003 (10) | −0.0087 (10) |
C30 | 0.0546 (14) | 0.0703 (17) | 0.0718 (17) | −0.0057 (11) | −0.0100 (13) | −0.0217 (13) |
C31 | 0.0713 (17) | 0.0733 (17) | 0.0603 (15) | −0.0037 (13) | −0.0112 (13) | −0.0276 (13) |
C32 | 0.0627 (14) | 0.0597 (14) | 0.0483 (12) | 0.0004 (11) | −0.0017 (10) | −0.0179 (11) |
C33 | 0.0541 (11) | 0.0378 (10) | 0.0348 (9) | 0.0004 (8) | 0.0095 (8) | −0.0031 (7) |
C34 | 0.0537 (11) | 0.0432 (10) | 0.0320 (9) | −0.0007 (8) | 0.0093 (8) | −0.0036 (7) |
C35 | 0.0420 (9) | 0.0397 (9) | 0.0353 (9) | −0.0014 (7) | 0.0072 (7) | 0.0010 (7) |
C36 | 0.0841 (16) | 0.0357 (10) | 0.0372 (10) | −0.0012 (10) | 0.0154 (10) | −0.0045 (8) |
C37 | 0.0827 (16) | 0.0433 (11) | 0.0321 (9) | −0.0032 (10) | 0.0147 (9) | −0.0030 (8) |
O1 | 0.108 (2) | 0.160 (3) | 0.178 (4) | −0.001 (2) | −0.031 (2) | 0.046 (3) |
C38 | 0.100 (3) | 0.120 (4) | 0.216 (7) | 0.004 (3) | 0.009 (4) | 0.045 (4) |
C39 | 0.072 (3) | 0.182 (6) | 0.294 (9) | 0.004 (3) | 0.001 (4) | 0.136 (7) |
C40 | 0.123 (5) | 0.190 (7) | 0.297 (11) | −0.014 (5) | −0.065 (6) | −0.020 (7) |
C41 | 0.124 (5) | 0.145 (5) | 0.332 (12) | 0.010 (4) | −0.021 (6) | −0.058 (7) |
C42 | 0.114 (5) | 0.246 (9) | 0.222 (7) | −0.017 (5) | −0.066 (5) | 0.017 (7) |
C43 | 0.182 (10) | 0.255 (13) | 0.65 (3) | 0.013 (9) | −0.070 (14) | −0.153 (15) |
C44 | 0.104 (5) | 0.232 (9) | 0.52 (2) | 0.021 (6) | 0.020 (8) | −0.012 (11) |
C45 | 0.121 (5) | 0.244 (8) | 0.179 (6) | −0.067 (5) | −0.003 (4) | 0.055 (6) |
C46 | 0.108 (4) | 0.168 (6) | 0.321 (11) | −0.017 (4) | 0.038 (6) | 0.010 (6) |
O2A | 0.114 (5) | 0.246 (9) | 0.222 (7) | −0.017 (5) | −0.066 (5) | 0.017 (7) |
O2B | 0.182 (10) | 0.255 (13) | 0.65 (3) | 0.013 (9) | −0.070 (14) | −0.153 (15) |
O2C | 0.104 (5) | 0.232 (9) | 0.52 (2) | 0.021 (6) | 0.020 (8) | −0.012 (11) |
O2D | 0.121 (5) | 0.244 (8) | 0.179 (6) | −0.067 (5) | −0.003 (4) | 0.055 (6) |
O2E | 0.108 (4) | 0.168 (6) | 0.321 (11) | −0.017 (4) | 0.038 (6) | 0.010 (6) |
Zn1—N3 | 2.0278 (15) | C22—C23 | 1.394 (4) |
Zn1—N1 | 2.0311 (15) | C22—H6 | 0.96 (3) |
Zn1—N5 | 2.0335 (15) | C23—C24 | 1.385 (3) |
Zn1—N7 | 2.0345 (15) | C23—H7 | 0.97 (3) |
Zn1—N9 | 2.0917 (16) | C24—H8 | 0.98 (2) |
N1—C8 | 1.366 (2) | C25—C26 | 1.386 (3) |
N1—C5 | 1.366 (2) | C25—H9 | 1.00 (2) |
N2—C8 | 1.339 (2) | C26—C27 | 1.391 (4) |
N2—C9 | 1.342 (2) | C26—H10 | 0.92 (3) |
N3—C9 | 1.364 (2) | C27—C28 | 1.388 (3) |
N3—C12 | 1.367 (2) | C27—H11 | 0.98 (3) |
N4—C13 | 1.334 (3) | C28—H12 | 0.98 (3) |
N4—C12 | 1.334 (2) | C29—C30 | 1.385 (4) |
N5—C16 | 1.365 (2) | C29—H13 | 0.92 (3) |
N5—C13 | 1.366 (2) | C30—C31 | 1.397 (4) |
N6—C1 | 1.335 (3) | C30—H14 | 0.99 (4) |
N6—C16 | 1.341 (3) | C31—C32 | 1.380 (4) |
N7—C1 | 1.365 (2) | C31—H15 | 0.98 (3) |
N7—C4 | 1.368 (2) | C32—H16 | 0.92 (3) |
N8—C5 | 1.333 (2) | C33—C34 | 1.372 (3) |
N8—C4 | 1.334 (2) | C33—H21 | 1.00 (2) |
N9—C37 | 1.335 (3) | C34—C35 | 1.403 (3) |
N9—C33 | 1.348 (2) | C34—H20 | 1.01 (3) |
N10—C35 | 1.344 (3) | C35—C36 | 1.397 (3) |
N10—H22 | 0.83 (3) | C36—C37 | 1.368 (3) |
N10—H23 | 0.83 (3) | C36—H19 | 0.97 (3) |
C1—C2 | 1.464 (3) | C37—H18 | 0.98 (3) |
C2—C17 | 1.396 (3) | O1—C38 | 1.327 (5) |
C2—C3 | 1.404 (3) | O1—C41 | 1.373 (7) |
C3—C20 | 1.387 (3) | C38—C39 | 1.462 (7) |
C3—C4 | 1.454 (3) | C38—H38A | 0.9700 |
C5—C6 | 1.460 (2) | C38—H38B | 0.9700 |
C6—C21 | 1.385 (3) | C39—C40 | 1.426 (9) |
C6—C7 | 1.398 (3) | C39—H39A | 0.9700 |
C7—C24 | 1.395 (3) | C39—H39B | 0.9700 |
C7—C8 | 1.469 (3) | C40—C41 | 1.420 (7) |
C9—C10 | 1.463 (3) | C40—H40A | 0.9700 |
C10—C25 | 1.392 (3) | C40—H40B | 0.9700 |
C10—C11 | 1.404 (3) | C41—H41A | 0.9700 |
C11—C28 | 1.388 (3) | C41—H41B | 0.9700 |
C11—C12 | 1.462 (3) | C42—C43 | 1.233 (11) |
C13—C14 | 1.460 (3) | C42—C46 | 1.299 (10) |
C14—C29 | 1.387 (3) | C42—H42A | 0.9700 |
C14—C15 | 1.403 (3) | C42—H42B | 0.9700 |
C15—C32 | 1.391 (3) | C43—C44 | 1.375 (10) |
C15—C16 | 1.460 (3) | C43—H43A | 0.9700 |
C17—C18 | 1.381 (4) | C43—H43B | 0.9700 |
C17—H1 | 0.97 (3) | C44—C45 | 1.465 (10) |
C18—C19 | 1.394 (4) | C44—H44A | 0.9700 |
C18—H2 | 0.91 (4) | C44—H44B | 0.9700 |
C19—C20 | 1.383 (4) | C45—C46 | 1.459 (8) |
C19—H3 | 0.96 (4) | C45—H45A | 0.9700 |
C20—H4 | 0.91 (3) | C45—H45B | 0.9700 |
C21—C22 | 1.387 (3) | C46—H46A | 0.9700 |
C21—H5 | 0.89 (3) | C46—H46B | 0.9700 |
N3—Zn1—N1 | 86.70 (6) | C24—C23—H7 | 119.6 (16) |
N3—Zn1—N5 | 87.94 (6) | C22—C23—H7 | 118.5 (16) |
N1—Zn1—N5 | 154.77 (6) | C23—C24—C7 | 117.3 (2) |
N3—Zn1—N7 | 154.46 (6) | C23—C24—H8 | 121.3 (14) |
N1—Zn1—N7 | 87.81 (6) | C7—C24—H8 | 121.4 (14) |
N5—Zn1—N7 | 86.47 (6) | C26—C25—C10 | 117.6 (2) |
N3—Zn1—N9 | 103.29 (6) | C26—C25—H9 | 122.7 (14) |
N1—Zn1—N9 | 101.89 (6) | C10—C25—H9 | 119.7 (14) |
N5—Zn1—N9 | 103.34 (6) | C25—C26—C27 | 121.6 (2) |
N7—Zn1—N9 | 102.25 (6) | C25—C26—H10 | 118.3 (16) |
C8—N1—C5 | 108.87 (15) | C27—C26—H10 | 120.0 (16) |
C8—N1—Zn1 | 125.94 (12) | C28—C27—C26 | 121.3 (2) |
C5—N1—Zn1 | 124.11 (12) | C28—C27—H11 | 118.0 (17) |
C8—N2—C9 | 123.22 (16) | C26—C27—H11 | 120.6 (17) |
C9—N3—C12 | 108.84 (15) | C27—C28—C11 | 117.3 (2) |
C9—N3—Zn1 | 125.89 (12) | C27—C28—H12 | 121.0 (15) |
C12—N3—Zn1 | 124.21 (12) | C11—C28—H12 | 121.7 (15) |
C13—N4—C12 | 123.51 (17) | C30—C29—C14 | 117.5 (2) |
C16—N5—C13 | 108.84 (15) | C30—C29—H13 | 123.3 (17) |
C16—N5—Zn1 | 126.52 (13) | C14—C29—H13 | 119.1 (17) |
C13—N5—Zn1 | 124.00 (12) | C29—C30—C31 | 121.3 (2) |
C1—N6—C16 | 123.41 (16) | C29—C30—H14 | 116 (2) |
C1—N7—C4 | 108.83 (15) | C31—C30—H14 | 123 (2) |
C1—N7—Zn1 | 126.50 (13) | C32—C31—C30 | 121.3 (2) |
C4—N7—Zn1 | 123.78 (12) | C32—C31—H15 | 120.8 (17) |
C5—N8—C4 | 123.60 (17) | C30—C31—H15 | 117.9 (17) |
C37—N9—C33 | 115.70 (17) | C31—C32—C15 | 118.0 (2) |
C37—N9—Zn1 | 120.61 (13) | C31—C32—H16 | 119.6 (17) |
C33—N9—Zn1 | 123.66 (13) | C15—C32—H16 | 122.3 (17) |
C35—N10—H22 | 117.2 (19) | N9—C33—C34 | 124.18 (18) |
C35—N10—H23 | 117.4 (15) | N9—C33—H21 | 116.6 (14) |
H22—N10—H23 | 125 (2) | C34—C33—H21 | 119.2 (14) |
N6—C1—N7 | 127.42 (17) | C33—C34—C35 | 119.62 (18) |
N6—C1—C2 | 123.53 (17) | C33—C34—H20 | 122.9 (16) |
N7—C1—C2 | 109.05 (17) | C35—C34—H20 | 117.3 (16) |
C17—C2—C3 | 121.0 (2) | N10—C35—C36 | 121.55 (19) |
C17—C2—C1 | 132.6 (2) | N10—C35—C34 | 122.46 (18) |
C3—C2—C1 | 106.29 (17) | C36—C35—C34 | 115.98 (18) |
C20—C3—C2 | 121.5 (2) | C37—C36—C35 | 120.11 (19) |
C20—C3—C4 | 132.3 (2) | C37—C36—H19 | 122.1 (19) |
C2—C3—C4 | 106.24 (17) | C35—C36—H19 | 117.6 (19) |
N8—C4—N7 | 127.97 (17) | N9—C37—C36 | 124.40 (19) |
N8—C4—C3 | 122.50 (17) | N9—C37—H18 | 125.0 (19) |
N7—C4—C3 | 109.48 (16) | C36—C37—H18 | 110.4 (19) |
N8—C5—N1 | 128.10 (16) | C38—O1—C41 | 107.2 (5) |
N8—C5—C6 | 122.56 (17) | O1—C38—C39 | 107.2 (5) |
N1—C5—C6 | 109.34 (16) | O1—C38—H38A | 110.3 |
C21—C6—C7 | 121.92 (18) | C39—C38—H38A | 110.3 |
C21—C6—C5 | 131.59 (19) | O1—C38—H38B | 110.3 |
C7—C6—C5 | 106.46 (16) | C39—C38—H38B | 110.3 |
C24—C7—C6 | 120.58 (19) | H38A—C38—H38B | 108.5 |
C24—C7—C8 | 133.15 (19) | C40—C39—C38 | 104.7 (5) |
C6—C7—C8 | 106.26 (16) | C40—C39—H39A | 110.8 |
N2—C8—N1 | 127.30 (16) | C38—C39—H39A | 110.8 |
N2—C8—C7 | 123.63 (17) | C40—C39—H39B | 110.8 |
N1—C8—C7 | 109.07 (16) | C38—C39—H39B | 110.8 |
N2—C9—N3 | 127.47 (16) | H39A—C39—H39B | 108.9 |
N2—C9—C10 | 123.16 (16) | C41—C40—C39 | 105.0 (6) |
N3—C9—C10 | 109.37 (16) | C41—C40—H40A | 110.7 |
C25—C10—C11 | 120.55 (19) | C39—C40—H40A | 110.7 |
C25—C10—C9 | 133.21 (19) | C41—C40—H40B | 110.7 |
C11—C10—C9 | 106.23 (16) | C39—C40—H40B | 110.7 |
C28—C11—C10 | 121.59 (18) | H40A—C40—H40B | 108.8 |
C28—C11—C12 | 132.15 (19) | O1—C41—C40 | 109.1 (6) |
C10—C11—C12 | 106.25 (16) | O1—C41—H41A | 109.9 |
N4—C12—N3 | 128.05 (17) | C40—C41—H41A | 109.9 |
N4—C12—C11 | 122.64 (17) | O1—C41—H41B | 109.9 |
N3—C12—C11 | 109.31 (16) | C40—C41—H41B | 109.9 |
N4—C13—N5 | 128.15 (17) | H41A—C41—H41B | 108.3 |
N4—C13—C14 | 122.63 (17) | C43—C42—C46 | 107.5 (7) |
N5—C13—C14 | 109.19 (16) | C43—C42—H42A | 110.2 |
C29—C14—C15 | 121.36 (19) | C46—C42—H42A | 110.2 |
C29—C14—C13 | 132.2 (2) | C43—C42—H42B | 110.2 |
C15—C14—C13 | 106.40 (17) | C46—C42—H42B | 110.2 |
C32—C15—C14 | 120.5 (2) | H42A—C42—H42B | 108.5 |
C32—C15—C16 | 133.3 (2) | C42—C43—C44 | 116.4 (10) |
C14—C15—C16 | 106.11 (17) | C42—C43—H43A | 108.2 |
N6—C16—N5 | 127.23 (17) | C44—C43—H43A | 108.2 |
N6—C16—C15 | 123.35 (17) | C42—C43—H43B | 108.2 |
N5—C16—C15 | 109.41 (17) | C44—C43—H43B | 108.2 |
C18—C17—C2 | 116.9 (2) | H43A—C43—H43B | 107.3 |
C18—C17—H1 | 122.3 (15) | C43—C44—C45 | 102.3 (7) |
C2—C17—H1 | 120.9 (15) | C43—C44—H44A | 111.3 |
C17—C18—C19 | 121.9 (2) | C45—C44—H44A | 111.3 |
C17—C18—H2 | 120 (2) | C43—C44—H44B | 111.3 |
C19—C18—H2 | 118 (2) | C45—C44—H44B | 111.3 |
C20—C19—C18 | 121.6 (2) | H44A—C44—H44B | 109.2 |
C20—C19—H3 | 117 (2) | C46—C45—C44 | 101.1 (6) |
C18—C19—H3 | 121 (2) | C46—C45—H45A | 111.6 |
C19—C20—C3 | 117.0 (2) | C44—C45—H45A | 111.6 |
C19—C20—H4 | 123.4 (16) | C46—C45—H45B | 111.6 |
C3—C20—H4 | 119.5 (16) | C44—C45—H45B | 111.6 |
C6—C21—C22 | 117.4 (2) | H45A—C45—H45B | 109.4 |
C6—C21—H5 | 122.0 (18) | C42—C46—C45 | 110.9 (7) |
C22—C21—H5 | 120.5 (18) | C42—C46—H46A | 109.5 |
C21—C22—C23 | 120.9 (2) | C45—C46—H46A | 109.5 |
C21—C22—H6 | 117.3 (17) | C42—C46—H46B | 109.5 |
C23—C22—H6 | 121.8 (17) | C45—C46—H46B | 109.5 |
C24—C23—C22 | 122.0 (2) | H46A—C46—H46B | 108.0 |
D—H···A | D—H | H···A | D···A | D—H···A |
N10—H23···N2i | 0.83 (3) | 2.27 (3) | 3.070 (2) | 162 (2) |
N10—H22···N6ii | 0.83 (3) | 2.38 (3) | 3.210 (3) | 179 (3) |
Symmetry codes: (i) −x+1, y−1/2, −z+1/2; (ii) −x+1, −y+1, −z. |
Experimental details
Crystal data | |
Chemical formula | [Zn(C32H16N8)(C5H6N2)]·2C4H8O |
Mr | 816.22 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 298 |
a, b, c (Å) | 13.5385 (17), 15.0756 (19), 19.224 (3) |
β (°) | 100.420 (3) |
V (Å3) | 3858.9 (9) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.69 |
Crystal size (mm) | 0.72 × 0.70 × 0.20 |
Data collection | |
Diffractometer | Rigaku Saturn 724 CCD area-detector diffractometer |
Absorption correction | Numerical (NUMABS; Higashi, 2000) |
Tmin, Tmax | 0.636, 0.874 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 30133, 8842, 8208 |
Rint | 0.028 |
(sin θ/λ)max (Å−1) | 0.650 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.044, 0.121, 1.06 |
No. of reflections | 8842 |
No. of parameters | 611 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.37, −0.44 |
Computer programs: CrystalClear (Rigaku, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEX (McArdle, 1995).
Zn1—N3 | 2.0278 (15) | Zn1—N7 | 2.0345 (15) |
Zn1—N1 | 2.0311 (15) | Zn1—N9 | 2.0917 (16) |
Zn1—N5 | 2.0335 (15) | ||
N3—Zn1—N1 | 86.70 (6) | N5—Zn1—N7 | 86.47 (6) |
N3—Zn1—N5 | 87.94 (6) | N3—Zn1—N9 | 103.29 (6) |
N1—Zn1—N5 | 154.77 (6) | N1—Zn1—N9 | 101.89 (6) |
N3—Zn1—N7 | 154.46 (6) | N5—Zn1—N9 | 103.34 (6) |
N1—Zn1—N7 | 87.81 (6) | N7—Zn1—N9 | 102.25 (6) |
D—H···A | D—H | H···A | D···A | D—H···A |
N10—H23···N2i | 0.83 (3) | 2.27 (3) | 3.070 (2) | 162 (2) |
N10—H22···N6ii | 0.83 (3) | 2.38 (3) | 3.210 (3) | 179 (3) |
Symmetry codes: (i) −x+1, y−1/2, −z+1/2; (ii) −x+1, −y+1, −z. |
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It is well known that phthalocyanines exhibit interesting optical, electrical, magnetic and catalytic properties, and they are widely used in many fields, such as dyes, catalysts, molecular materials, chemical sensors, nonlinear optical materials, etc. (Kadish et al., 2003; Mckeown, 1998; Torre et al., 2001). Among those phthalocyanine compounds, the phthalocyaninatozinc (ZnPc) derivatives are particularly interesting owing to their unique photosensitizing properties for photodynamic therapy (PDT) (Lukyanets, 1999; Tabata et al., 2000; Milgrom, 1977; Bonnett, 1995), magnetic circularly polarized luminescence (MCPL) and magnetic circular dichroism (MCD) spectra. Our interest in ZnPc derivatives is due to their photodynamic activity. Some crystal structures of (4+1)-coordinated ZnPc derivatives, such as ZnPc(n-hexylamine), ZnPcCl, ZnPc(dipy–pra) (dipy-pra is 1,3-di-4-pyridylpropane), ZnPc[(di/tetra/hexa/octaphenyl-py)], [ZnPc(H2O)].2DMF (DMF is dimethylformamide) and ZnPc(4-Mepy) (4-Mepy is ?) have been reported (Kobayashi et al., 1971; Deneux et al., 1985; Zeng et al., 2005; Fukuda et al., 2005; Cui et al., 2007; Kubiak et al., 2007). In this paper, we report the structure of the title compound, (I), produced by the reaction of 4-aminopyridine with zinc phthalocyanine in tetrahydrofuran (THF) solution. UV–vis and fluorescence spectral measurements and thermal gravimetric analysis were also applied to characterize this complex.
The asymmetric unit of (I) consists of a (4-aminopyridine-κN1)(phthalocyaninato-κ4N)zinc(II) unit, denoted ZnPc(4-ap), and two THF solvent molecules (one of the THF molecules shows disorder) (Fig. 1). The central ZnII atom exhibits (4+1)-coordination by four isoindole N atoms of the Pc ring system and one pyridine N atom of the 4-aminopyridine molecule, forming a distorted pyramid (Table 1). The Zn atom in this coordination environment assumes an sp2d2 hybridization. The bond distances from the azamethine N atoms of the Pc ring to the central Zn atom range from 2.0275 (15) to 2.0343 (15)Å, whereas that from the pyridine N atom of the axial ligand is somewhat longer at 2.0917 (16)Å. The angle between the basal Pc plane defined by the four isoindole N atoms (the N4 plane) and the plane of the coordinated 4-aminopyridine molecule is 87.7(?)°, thus the 4-aminopyridine molecule is almost perpendicular to the Pc plane. The central Zn atom is significantly displaced (by about 0.45Å) from the N4 plane towards the axially coordinated N atom of the 4-aminopyridine molecule.
For axially coordinated ZnPc complexes, a range of values have been observed for the distance between the ZnII cation and the N4 plane, and is related to the bond strength between the metal cation and the axial ligand. For example, the Zn atom is displaced from the N4 plane as follows: 0.2Å in ZnPc(dipy–pra), 0.35Å in ZnPc(4-Mepy), 0.38Å in ZnPc(H2O).2DMF, 0.48Å in ZnPc(n-hexylamine) and 0.59Å in ZnPcCl (Zeng et al., 2005; Kubiak et al., 2007; Cui et al., 2007; Kobayashi et al., 1971; Deneux et al., 1985); the displacement is 0.45Å in compound (I). Additionally, the Pc ring is distorted from planarity, with small angles between the benzene rings and the N4 plane of 8.30 (13), 4.55 (10), 4.22 (10) and 7.56 (12)° for the C2/C3/C17–C20, C6/C7/C21–C24, C10/C11/C25–C28 and C14/C15/C29–C32 rings, respectively. The small differences of these angles are related to the aggregation of the Pc rings, where the less overlapped benzene rings have slightly larger distortion angles.
The crystal structure of (I) is stabilized by hydrogen bonds and π–π interactions between Pc rings. The hydrogen-bonding interactions occur between the azamethine N2 and N6 atoms of the Pc ring as acceptors and the amino group of the 4-aminopyridine molecule as donor (Fig. 2 and Table 2). These intermolecular hydrogen bonds construct an infinite two-dimensional layer in the bc plane. Concurrently, in the two-dimensional layer, the Pc rings are aggregated in a back-to-back fashion, with a distance of 3.56Å and centre offset of 3.15Å of the two stacked N4 planes, which indicates a strong intermolecular π–π interaction (Pauling, 1960). Finally, the THF molecules occupy the space around the axial 4-aminopyridine ligands (Figs. 1 and 3).
As further characterizations of compound (I), the electronic absorption spectrum was recorded in DMF solution. It showed intense absorption in the UV region (B band, 343 nm) and visible–IR region (Q band, 669 nm). Compared with the corresponding bands of ZnPc (340 and 669 nm), a slight red shift in the B band occurs in compound (I), but the Q band is at the same position which indicates the axial ligand has less influence on the Pc π system. In the UV–visible diffuse reflectance spectra of the solid sample, bands at 570 and 649 nm appeared and correspond to the dimeric aggregate of molecules.
ZnPc derivatives all display strong fluorescences. Compound (I) in DMF solution exhibits two emission peaks at about 679 and 739 nm (λex = 617 nm). In contrast to the emission wavelength (676 and 743 nm) of unsubstituted ZnPc, the small red (3 nm) and blue (4 nm) shifts can be related to the presence of the axial ligand (Ogunsipe et al., 2003; Yslas et al., 2005; Nitschke et al., 2004).
The thermogravimetric analysis shows two characteristic steps, the first at about 339 K corresponds to the loss of the THF molecules (12.26%) and the second at about 448 K correlates with the loss of 4-aminopyridine. Finally, above 571 K, the sample decomposes.