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A crystallographic quantum-mechanical/molecular-mechanical model (c-QM/MM model) with full space-group symmetry has been developed for molecular crystals. The lattice energy was calculated by quantum-mechanical methods for short-range interactions and force-field methods for long-range interactions. The quantum-mechanical calculations covered the interactions within the molecule and the interactions of a reference molecule with each of the surrounding 12–15 molecules. The interactions with all other molecules were treated by force-field methods. In each optimization step the energies in the QM and MM shells were calculated separately as single-point energies; after adding both energy contributions, the crystal structure (including the lattice parameters) was optimized accordingly. The space-group symmetry was maintained throughout. Crystal structures with more than one molecule per asymmetric unit, e.g. structures with Z′ = 2, hydrates and solvates, have been optimized as well. Test calculations with different quantum-mechanical methods on nine small organic molecules revealed that the density functional theory methods with dispersion correction using the B97-D functional with 6-31G* basis set in combination with the DREIDING force field reproduced the experimental crystal structures with good accuracy. Subsequently the c-QM/MM method was applied to nine compounds from the CCDC blind tests resulting in good energy rankings and excellent geometric accuracies.
Supporting information
| Crystallographic Information File (CIF) https://doi.org/10.1107/S2053273314018907/kx5031sup1.cif Contains datablocks 1_ethane.cif, 2_propane.cif, 3_congressane.cif, 4_hexamethylenetetramine.cif, 5_benzene_P21c.cif, 5_benzene_Pbca.cif, 6_methanole_P-1.cif, methanol_P212121, 7_ethanole_Pc.cif, 7_ethanole_P21c, 8_acetac_Pna21.cif, oxalic_acid_P21c.cif, 9_oxalic_acid_Pbca.cif, I_1_opt.cif, I_2_opt.cif, II_opt.cif, III_opt.cif, IV_opt.cif, VI_opt.cif, VII_opt.cif, VIII_opt.cif, X_opt.cif, XI_opt.cif |
| Portable Document Format (PDF) file https://doi.org/10.1107/S2053273314018907/kx5031sup2.pdf Supplementary material |
Crystal data top
? | β = 90.416° |
Mr = ? | V = 122.75 Å3 |
Monoclinic, P21/n | Z = ? |
a = 4.225 Å | ? radiation, λ = ? Å |
b = 5.441 Å | × × mm |
c = 5.592 Å | |
Crystal data top
? | β = 90.416° |
Mr = ? | V = 122.75 Å3 |
Monoclinic, P21/n | Z = ? |
a = 4.225 Å | ? radiation, λ = ? Å |
b = 5.441 Å | × × mm |
c = 5.592 Å | |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Biso*/Beq | |
C1 | −0.04014 | 0.10223 | −0.09583 | | |
H2 | 0.07587 | 0.07091 | −0.27665 | | |
H3 | −0.28572 | 0.10915 | −0.13262 | | |
H4 | 0.02734 | 0.28518 | −0.02697 | | |
Crystal data top
? | β = 91.033° |
Mr = ? | V = 342.66 Å3 |
Monoclinic, P2_1/n | Z = ? |
a = 4.1832 Å | ? radiation, λ = ? Å |
b = 12.7487 Å | × × mm |
c = 7.0031 Å | |
Crystal data top
? | β = 91.033° |
Mr = ? | V = 342.66 Å3 |
Monoclinic, P2_1/n | Z = ? |
a = 4.1832 Å | ? radiation, λ = ? Å |
b = 12.7487 Å | × × mm |
c = 7.0031 Å | |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Biso*/Beq | |
C1 | 0.21539 | −0.05478 | 0.22443 | | |
H2 | −0.04922 | −0.05712 | 0.19162 | | |
H3 | 0.34094 | −0.07861 | 0.08832 | | |
H4 | 0.28146 | 0.02880 | 0.25622 | | |
C5 | 0.30727 | −0.12883 | 0.39745 | | |
H6 | 0.17925 | −0.10298 | 0.53182 | | |
H7 | 0.57023 | −0.12039 | 0.43299 | | |
C8 | 0.22961 | −0.24644 | 0.35443 | | |
H9 | −0.03398 | −0.25867 | 0.32679 | | |
H10 | 0.35762 | −0.27428 | 0.22179 | | |
H11 | 0.30432 | −0.29850 | 0.47853 | | |
Crystal data top
? | V = 891.26 Å3 |
Mr = ? | Z = ? |
Cubic, Pa3 | ? radiation, λ = ? Å |
a = 9.6325 Å | × × mm |
Crystal data top
? | V = 891.26 Å3 |
Mr = ? | Z = ? |
Cubic, Pa3 | ? radiation, λ = ? Å |
a = 9.6325 Å | × × mm |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Biso*/Beq | |
C1 | −0.35998 | −0.64002 | −0.14002 | | |
C2 | −0.26964 | −0.54790 | −0.04559 | | |
C3 | −0.36218 | −0.45578 | 0.04601 | | |
H4 | −0.29968 | −0.70032 | −0.20032 | | |
H5 | −0.22825 | −0.60221 | 0.03361 | | |
H6 | −0.23497 | −0.48739 | −0.09570 | | |
(4_hexamethylenetetramine.cif)
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Crystal data top
? | V = 320.15 Å3 |
Mr = ? | Z = ? |
Cubic, I43m | ? radiation, λ = ? Å |
a = 6.841 Å | × × mm |
Crystal data top
? | V = 320.15 Å3 |
Mr = ? | Z = ? |
Cubic, I43m | ? radiation, λ = ? Å |
a = 6.841 Å | × × mm |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Biso*/Beq | |
C1 | 0.24660 | −0.00162 | −0.00162 | | |
N2 | 0.12340 | 0.12340 | 0.12340 | | |
H3 | 0.33434 | 0.08946 | −0.09271 | | |
Crystal data top
? | β = 110.028° |
Mr = ? | V = 208.89 Å3 |
Monoclinic, P21/c | Z = ? |
a = 5.4170 Å | ? radiation, λ = ? Å |
b = 5.4492 Å | × × mm |
c = 7.5320 Å | |
Crystal data top
? | β = 110.028° |
Mr = ? | V = 208.89 Å3 |
Monoclinic, P21/c | Z = ? |
a = 5.4170 Å | ? radiation, λ = ? Å |
b = 5.4492 Å | × × mm |
c = 7.5320 Å | |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Biso*/Beq | |
C1 | −0.26140 | −0.02341 | −0.11498 | | |
C2 | −0.08015 | −0.20216 | −0.11875 | | |
C3 | −0.18117 | 0.17844 | 0.00379 | | |
H4 | −0.44012 | −0.03919 | −0.19358 | | |
H5 | −0.13486 | −0.34060 | −0.20008 | | |
H6 | −0.30517 | 0.30109 | 0.00653 | | |
Crystal data top
? | c = 6.7042 Å |
Mr = ? | V = 448.59 Å3 |
Orthorhombic, Pbca | Z = ? |
a = 7.3429 Å | ? radiation, λ = ? Å |
b = 9.1125 Å | × × mm |
Crystal data top
? | c = 6.7042 Å |
Mr = ? | V = 448.59 Å3 |
Orthorhombic, Pbca | Z = ? |
a = 7.3429 Å | ? radiation, λ = ? Å |
b = 9.1125 Å | × × mm |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Biso*/Beq | |
C1 | −0.43891 | −0.14400 | −0.50701 | | |
C2 | −0.36142 | −0.04621 | −0.37201 | | |
C3 | −0.57749 | −0.09903 | −0.63459 | | |
H4 | −0.39473 | −0.25864 | −0.51249 | | |
H5 | −0.25262 | −0.08074 | −0.27236 | | |
H6 | −0.63798 | −0.17377 | −0.73972 | | |
(6_methanole_P-1.cif)
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Crystal data top
? | β = 102.890° |
Mr = ? | γ = 93.850° |
Triclinic, P1 | V = 238.16 Å3 |
a = 7.6700 Å | Z = ? |
b = 4.4101 Å | ? radiation, λ = ? Å |
c = 7.2405 Å | × × mm |
α = 88.100° | |
Crystal data top
? | β = 102.890° |
Mr = ? | γ = 93.850° |
Triclinic, P1 | V = 238.16 Å3 |
a = 7.6700 Å | Z = ? |
b = 4.4101 Å | ? radiation, λ = ? Å |
c = 7.2405 Å | × × mm |
α = 88.100° | |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Biso*/Beq | |
O1 | −0.2720 | −0.4961 | −0.1371 | | |
C2 | −0.3927 | −0.7409 | −0.1166 | | |
H3 | −0.2977 | −0.4238 | −0.2648 | | |
H4 | −0.3284 | −0.8951 | −0.0054 | | |
H5 | −0.5101 | −0.6565 | −0.0789 | | |
H6 | −0.4335 | −0.8614 | −0.2497 | | |
O7 | −0.1345 | −0.3119 | −0.7937 | | |
C8 | −0.0237 | −0.0441 | −0.7717 | | |
H9 | −0.2562 | −0.2627 | −0.8317 | | |
H10 | 0.0971 | −0.0802 | −0.6636 | | |
H11 | 0.0126 | 0.0186 | −0.9056 | | |
H12 | −0.0947 | 0.1378 | −0.7289 | | |
O13 | −0.2260 | −0.4839 | −0.4987 | | |
C14 | −0.3332 | −0.7437 | −0.5665 | | |
H15 | −0.1035 | −0.5296 | −0.4710 | | |
H16 | −0.4625 | −0.7383 | −0.5283 | | |
H17 | −0.3531 | −0.7492 | −0.7201 | | |
H18 | −0.2674 | −0.9457 | −0.5038 | | |
Crystal data top
? | c = 8.8671 Å |
Mr = ? | V = 200.53 Å3 |
Orthorhombic, P212121 | Z = ? |
a = 4.8728 Å | ? radiation, λ = ? Å |
b = 4.6411 Å | × × mm |
Crystal data top
? | c = 8.8671 Å |
Mr = ? | V = 200.53 Å3 |
Orthorhombic, P212121 | Z = ? |
a = 4.8728 Å | ? radiation, λ = ? Å |
b = 4.6411 Å | × × mm |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Biso*/Beq | |
C1 | −0.4960 | −0.0051 | −0.1052 | | |
O1 | −0.2331 | 0.0254 | −0.1727 | | |
H1 | −0.1980 | −0.1475 | −0.2296 | | |
H2 | −0.5325 | 0.1909 | −0.0413 | | |
H3 | −0.6596 | −0.0280 | −0.1887 | | |
H4 | −0.5057 | −0.1880 | −0.0277 | | |
Crystal data top
? | β = 100.6° |
Mr = ? | V = 314.34 Å3 |
Monoclinic, Pc | Z = ? |
a = 5.482 Å | ? radiation, λ = ? Å |
b = 6.962 Å | × × mm |
c = 8.401 Å | |
Crystal data top
? | β = 100.6° |
Mr = ? | V = 314.34 Å3 |
Monoclinic, Pc | Z = ? |
a = 5.482 Å | ? radiation, λ = ? Å |
b = 6.962 Å | × × mm |
c = 8.401 Å | |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Biso*/Beq | |
C1 | 0.0046 | 0.2957 | 0.1431 | | |
C4 | 0.2133 | 0.2740 | 0.0459 | | |
H1 | −0.0495 | 0.0215 | 0.1778 | | |
H8 | 0.0421 | 0.4206 | 0.2256 | | |
H9 | −0.1791 | 0.3205 | 0.0586 | | |
H10 | 0.1760 | 0.1497 | −0.0377 | | |
H11 | 0.3958 | 0.2516 | 0.1303 | | |
H12 | 0.2256 | 0.4030 | −0.0287 | | |
O1 | −0.0076 | 0.1335 | 0.2485 | | |
C2 | −0.3951 | 0.2291 | −0.4792 | | |
C3 | −0.4682 | 0.2537 | −0.3133 | | |
H2 | −0.0839 | 0.1634 | −0.5523 | | |
H3 | −0.5114 | 0.1154 | −0.5512 | | |
H4 | −0.4306 | 0.3642 | −0.5506 | | |
H5 | −0.3542 | 0.3679 | −0.2426 | | |
H6 | −0.4342 | 0.1191 | −0.2430 | | |
H7 | −0.6685 | 0.2919 | −0.3298 | | |
O2 | −0.1318 | 0.1790 | −0.4470 | | |
Crystal data top
? | β = 114.800° |
Mr = ? | V = 312.40 Å3 |
Monoclinic, P21/c | Z = ? |
a = 7.8260 Å | ? radiation, λ = ? Å |
b = 5.6038 Å | × × mm |
c = 7.8470 Å | |
Crystal data top
? | β = 114.800° |
Mr = ? | V = 312.40 Å3 |
Monoclinic, P21/c | Z = ? |
a = 7.8260 Å | ? radiation, λ = ? Å |
b = 5.6038 Å | × × mm |
c = 7.8470 Å | |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Biso*/Beq | |
O1 | −0.0663 | 0.2968 | 0.1625 | | |
C2 | −0.2920 | 0.0235 | −0.0371 | | |
C3 | −0.2464 | 0.2847 | 0.0071 | | |
H4 | −0.0365 | 0.4630 | 0.1915 | | |
H5 | −0.2451 | 0.3770 | −0.1154 | | |
H6 | −0.3545 | 0.3695 | 0.0409 | | |
H7 | −0.2945 | −0.0675 | 0.0844 | | |
H8 | −0.1852 | −0.0600 | −0.0719 | | |
H9 | −0.4286 | 0.0025 | −0.1552 | | |
Crystal data top
? | c = 5.7499 Å |
Mr = ? | V = 312.70 Å3 |
Orthorhombic, Pna21 | Z = ? |
a = 13.3086 Å | ? radiation, λ = ? Å |
b = 4.0890 Å | × × mm |
Crystal data top
? | c = 5.7499 Å |
Mr = ? | V = 312.70 Å3 |
Orthorhombic, Pna21 | Z = ? |
a = 13.3086 Å | ? radiation, λ = ? Å |
b = 4.0890 Å | × × mm |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Biso*/Beq | |
C1 | 0.14478 | 0.28747 | 0.17375 | | |
C2 | 0.06909 | 0.37791 | 0.35168 | | |
H1 | 0.16167 | 0.05261 | −0.11431 | | |
H2 | 0.10769 | 0.51174 | 0.49515 | | |
H3 | 0.01268 | 0.54173 | 0.28231 | | |
H4 | 0.03268 | 0.16968 | 0.42490 | | |
O1 | 0.10837 | 0.10913 | 0.00217 | | |
O2 | 0.23259 | 0.37199 | 0.17975 | | |
(oxalic_acid_P21c.cif)
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Crystal data top
? | β = 115.830° |
Mr = ? | V = 157.43 Å3 |
Monoclinic, P21/c | Z = ? |
a = 5.8510 Å | ? radiation, λ = ? Å |
b = 6.0150 Å | × × mm |
c = 4.9699 Å | |
Crystal data top
? | β = 115.830° |
Mr = ? | V = 157.43 Å3 |
Monoclinic, P21/c | Z = ? |
a = 5.8510 Å | ? radiation, λ = ? Å |
b = 6.0150 Å | × × mm |
c = 4.9699 Å | |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Biso*/Beq | |
C1 | 0.1282 | 0.004953 | −0.006372 | | |
H2 | 0.459247 | −0.098608 | 0.200781 | | |
O3 | 0.166604 | 0.103896 | −0.195963 | | |
O4 | 0.302354 | −0.111628 | 0.22216 | | |
(9_oxalic_acid_Pbca.cif)
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Crystal data top
? | c = 7.8524 Å |
Mr = ? | V = 313.88 Å3 |
Orthorhombic, Pcab | Z = ? |
a = 6.5594 Å | ? radiation, λ = ? Å |
b = 6.0940 Å | × × mm |
Crystal data top
? | c = 7.8524 Å |
Mr = ? | V = 313.88 Å3 |
Orthorhombic, Pcab | Z = ? |
a = 6.5594 Å | ? radiation, λ = ? Å |
b = 6.0940 Å | × × mm |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Biso*/Beq | |
O1 | 0.15710 | 0.26470 | 0.00130 | | |
O2 | 0.02330 | 0.45710 | −0.22090 | | |
C3 | 0.05540 | 0.41490 | −0.05480 | | |
H4 | 0.09730 | 0.34410 | −0.28260 | | |
Crystal data top
? | c = 14.2229 Å |
Mr = ? | V = 900.33 Å3 |
Orthorhombic, Pbca | Z = ? |
a = 5.3187 Å | ? radiation, λ = ? Å |
b = 12.4468 Å | × × mm |
Crystal data top
? | c = 14.2229 Å |
Mr = ? | V = 900.33 Å3 |
Orthorhombic, Pbca | Z = ? |
a = 5.3187 Å | ? radiation, λ = ? Å |
b = 12.4468 Å | × × mm |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Biso*/Beq | |
O1 | 0.03465 | 0.20387 | 0.11795 | | |
C2 | 0.15450 | 0.11877 | 0.16644 | | |
H3 | 0.32472 | 0.14152 | 0.20446 | | |
C4 | 0.01897 | 0.02604 | 0.15096 | | |
C5 | −0.05653 | −0.09417 | 0.15630 | | |
H6 | −0.10860 | −0.12419 | 0.22796 | | |
H7 | 0.07785 | −0.15151 | 0.12389 | | |
C8 | −0.28824 | −0.06325 | 0.08957 | | |
H9 | −0.47394 | −0.07560 | 0.12227 | | |
H10 | −0.28607 | −0.10180 | 0.01838 | | |
C11 | −0.18999 | 0.05343 | 0.09140 | | |
C12 | −0.17805 | 0.16211 | 0.07195 | | |
H13 | −0.28534 | 0.22124 | 0.03099 | | |
Crystal data top
? | β = 90.982° |
Mr = ? | V = 455.43 Å3 |
Monoclinic, P2_1/c | Z = ? |
a = 4.9684 Å | ? radiation, λ = ? Å |
b = 10.0375 Å | × × mm |
c = 9.8077 Å | |
Crystal data top
? | β = 90.982° |
Mr = ? | V = 455.43 Å3 |
Monoclinic, P2_1/c | Z = ? |
a = 4.9684 Å | ? radiation, λ = ? Å |
b = 10.0375 Å | × × mm |
c = 9.8077 Å | |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Biso*/Beq | |
C1 | −0.04061 | 0.31655 | 0.00302 | | |
C2 | −0.22854 | 0.34860 | 0.10251 | | |
C3 | −0.40578 | 0.43516 | 0.19798 | | |
C4 | −0.52490 | 0.29889 | 0.25916 | | |
C5 | −0.33240 | 0.22631 | 0.15934 | | |
C6 | −0.20468 | 0.12249 | 0.09377 | | |
O7 | −0.02320 | 0.17713 | −0.00337 | | |
H8 | 0.09173 | 0.36917 | −0.06939 | | |
H9 | −0.29066 | 0.49562 | 0.27612 | | |
H10 | −0.55778 | 0.49942 | 0.14366 | | |
H11 | −0.48453 | 0.28298 | 0.37246 | | |
H12 | −0.74467 | 0.28395 | 0.23632 | | |
H13 | −0.20824 | 0.01359 | 0.09613 | | |
Crystal data top
? | β = 103.204° |
Mr = ? | V = 514.25 Å3 |
Monoclinic, P2_1/n | Z = ? |
a = 7.2899 Å | ? radiation, λ = ? Å |
b = 8.7833 Å | × × mm |
c = 8.8590 Å | |
Crystal data top
? | β = 103.204° |
Mr = ? | V = 514.25 Å3 |
Monoclinic, P2_1/n | Z = ? |
a = 7.2899 Å | ? radiation, λ = ? Å |
b = 8.7833 Å | × × mm |
c = 8.8590 Å | |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Biso*/Beq | |
S1 | −0.35738 | −0.41783 | −0.16207 | | |
C1 | −0.30447 | −0.59640 | −0.08377 | | |
H1 | −0.35939 | −0.69575 | −0.15630 | | |
C2 | −0.19602 | −0.59166 | 0.07423 | | |
O1 | −0.13085 | −0.71280 | 0.16983 | | |
H2 | −0.17207 | −0.81134 | 0.11241 | | |
C3 | −0.15789 | −0.44040 | 0.13219 | | |
H3 | −0.07891 | −0.41264 | 0.25359 | | |
C3 | −0.23735 | −0.33285 | 0.01645 | | |
C5 | −0.23366 | −0.17363 | 0.03157 | | |
N1 | −0.23288 | −0.04048 | 0.04163 | | |
Crystal data top
? | β = 96.479° |
Mr = ? | V = 1094.45 Å3 |
Monoclinic, P2_1/c | Z = ? |
a = 6.8127 Å | ? radiation, λ = ? Å |
b = 7.4710 Å | × × mm |
c = 21.6413 Å | |
Crystal data top
? | β = 96.479° |
Mr = ? | V = 1094.45 Å3 |
Monoclinic, P2_1/c | Z = ? |
a = 6.8127 Å | ? radiation, λ = ? Å |
b = 7.4710 Å | × × mm |
c = 21.6413 Å | |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Biso*/Beq | |
C1 | −0.29095 | 0.10388 | 0.07261 | | |
H1 | −0.18064 | 0.02623 | 0.10181 | | |
C2 | −0.48075 | 0.09857 | 0.08534 | | |
H2 | −0.59178 | 0.17596 | 0.05622 | | |
B1 | −0.21701 | 0.21146 | 0.01998 | | |
O1 | −0.33271 | 0.31426 | −0.02471 | | |
O2 | −0.01714 | 0.21779 | 0.00976 | | |
C11 | −0.20160 | 0.38378 | −0.06271 | | |
C12 | −0.01051 | 0.32548 | −0.04175 | | |
C13 | 0.15226 | 0.37419 | −0.07079 | | |
H13 | 0.30090 | 0.33045 | −0.05374 | | |
C14 | 0.11469 | 0.48419 | −0.12331 | | |
H14 | 0.23742 | 0.52493 | −0.14820 | | |
C15 | −0.07635 | 0.54213 | −0.14446 | | |
H15 | −0.09991 | 0.62709 | −0.18548 | | |
C16 | −0.23953 | 0.49369 | −0.11409 | | |
H16 | −0.38815 | 0.53853 | −0.13043 | | |
C21 | −0.55709 | 0.00010 | 0.13584 | | |
C22 | −0.75599 | 0.02408 | 0.14581 | | |
H22 | −0.84720 | 0.11376 | 0.11500 | | |
C23 | −0.83454 | −0.06325 | 0.19435 | | |
H23 | −0.98816 | −0.04132 | 0.20180 | | |
C24 | −0.71689 | −0.17878 | 0.23331 | | |
H24 | −0.77812 | −0.24999 | 0.27064 | | |
C25 | −0.51963 | −0.20576 | 0.22355 | | |
H25 | −0.42842 | −0.29826 | 0.25320 | | |
C26 | −0.44067 | −0.11732 | 0.17555 | | |
H26 | −0.28788 | −0.14259 | 0.16793 | | |
Crystal data top
? | β = 95.520° |
Mr = ? | V = 767.00 Å3 |
Monoclinic, P2_1/a | Z = ? |
a = 8.3314 Å | ? radiation, λ = ? Å |
b = 10.6836 Å | × × mm |
c = 8.6502 Å | |
Crystal data top
? | β = 95.520° |
Mr = ? | V = 767.00 Å3 |
Monoclinic, P2_1/a | Z = ? |
a = 8.3314 Å | ? radiation, λ = ? Å |
b = 10.6836 Å | × × mm |
c = 8.6502 Å | |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Biso*/Beq | |
N1 | 0.02139 | −0.09105 | −0.19413 | | |
H2 | −0.07503 | −0.15293 | −0.19814 | | |
C3 | 0.17231 | −0.14203 | −0.19564 | | |
O4 | 0.18829 | −0.25837 | −0.20412 | | |
C5 | 0.31122 | −0.05152 | −0.19097 | | |
H6 | 0.41345 | −0.10058 | −0.13036 | | |
C7 | 0.27270 | 0.07144 | −0.10973 | | |
H8 | 0.37226 | 0.13790 | −0.11299 | | |
H9 | 0.25509 | 0.05446 | 0.01268 | | |
C10 | 0.12285 | 0.12826 | −0.19676 | | |
H11 | 0.08830 | 0.21560 | −0.14066 | | |
C12 | −0.01525 | 0.03755 | −0.19261 | | |
O13 | −0.15497 | 0.07132 | −0.19057 | | |
C14 | 0.15234 | 0.15878 | −0.36706 | | |
H15 | 0.23894 | 0.23662 | −0.36073 | | |
H16 | 0.04235 | 0.19539 | −0.43009 | | |
C17 | 0.21526 | 0.04564 | −0.45366 | | |
H18 | 0.11830 | −0.02218 | −0.48354 | | |
H19 | 0.25388 | 0.07723 | −0.56508 | | |
C20 | 0.35158 | −0.02281 | −0.35827 | | |
H21 | 0.38166 | −0.11096 | −0.41570 | | |
H22 | 0.46010 | 0.03534 | −0.34661 | | |
Crystal data top
? | β = 86.157° |
Mr = ? | V = 1069.64 Å3 |
Monoclinic, P2_1/c | Z = ? |
a = 8.8320 Å | ? radiation, λ = ? Å |
b = 9.2134 Å | × × mm |
c = 14.0267 Å | |
Crystal data top
? | β = 86.157° |
Mr = ? | V = 1069.64 Å3 |
Monoclinic, P2_1/c | Z = ? |
a = 8.8320 Å | ? radiation, λ = ? Å |
b = 9.2134 Å | × × mm |
c = 14.0267 Å | |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Biso*/Beq | |
H1 | −0.0039 | −0.0157 | 0.1941 | | |
C2 | −0.1621 | 0.0934 | 0.1186 | | |
C3 | −0.0776 | −0.1552 | 0.0925 | | |
C4 | −0.1685 | −0.1676 | 0.0145 | | |
H5 | −0.1684 | −0.2688 | −0.0251 | | |
C6 | −0.2531 | −0.0483 | −0.0104 | | |
H7 | −0.3222 | −0.0565 | −0.0717 | | |
C8 | −0.2521 | 0.0821 | 0.0404 | | |
H9 | −0.3191 | 0.1740 | 0.0198 | | |
C10 | −0.4094 | 0.3627 | 0.1613 | | |
C11 | −0.4820 | 0.4753 | 0.1156 | | |
H12 | −0.4153 | 0.5584 | 0.0769 | | |
C13 | −0.6401 | 0.4783 | 0.1197 | | |
H14 | −0.6991 | 0.5640 | 0.0837 | | |
C15 | −0.7234 | 0.3691 | 0.1682 | | |
H16 | −0.8467 | 0.3700 | 0.1694 | | |
C17 | −0.6499 | 0.2571 | 0.2137 | | |
H18 | −0.7152 | 0.1708 | 0.2501 | | |
C19 | −0.4918 | 0.2538 | 0.2107 | | |
H20 | −0.4328 | 0.1671 | 0.2456 | | |
N21 | −0.1467 | 0.2057 | 0.1804 | | |
N22 | −0.0777 | −0.0262 | 0.1401 | | |
N23 | 0.0115 | −0.2626 | 0.1217 | | |
H24 | −0.0057 | −0.3630 | 0.0938 | | |
H25 | 0.0574 | −0.2583 | 0.1868 | | |
O26 | −0.1711 | 0.4532 | 0.2418 | | |
O27 | −0.1513 | 0.4227 | 0.0658 | | |
S28 | −0.2074 | 0.3637 | 0.1591 | | |
Crystal data top
? | β = 91.033° |
Mr = ? | V = 342.66 Å3 |
Monoclinic, P2_1/n | Z = ? |
a = 4.1832 Å | ? radiation, λ = ? Å |
b = 12.7487 Å | × × mm |
c = 7.0031 Å | |
Crystal data top
? | β = 91.033° |
Mr = ? | V = 342.66 Å3 |
Monoclinic, P2_1/n | Z = ? |
a = 4.1832 Å | ? radiation, λ = ? Å |
b = 12.7487 Å | × × mm |
c = 7.0031 Å | |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Biso*/Beq | |
C1 | 0.21539 | −0.05478 | 0.22443 | | |
H2 | −0.04922 | −0.05712 | 0.19162 | | |
H3 | 0.34094 | −0.07861 | 0.08832 | | |
H4 | 0.28146 | 0.02880 | 0.25622 | | |
C5 | 0.30727 | −0.12883 | 0.39745 | | |
H6 | 0.17925 | −0.10298 | 0.53182 | | |
H7 | 0.57023 | −0.12039 | 0.43299 | | |
C8 | 0.22961 | −0.24644 | 0.35443 | | |
H9 | −0.03398 | −0.25867 | 0.32679 | | |
H10 | 0.35762 | −0.27428 | 0.22179 | | |
H11 | 0.30432 | −0.29850 | 0.47853 | | |
Crystal data top
? | β = 103.129° |
Mr = ? | V = 836.67 Å3 |
Monoclinic, C2/c | Z = ? |
a = 9.8958 Å | ? radiation, λ = ? Å |
b = 12.7552 Å | × × mm |
c = 6.8064 Å | |
Crystal data top
? | β = 103.129° |
Mr = ? | V = 836.67 Å3 |
Monoclinic, C2/c | Z = ? |
a = 9.8958 Å | ? radiation, λ = ? Å |
b = 12.7552 Å | × × mm |
c = 6.8064 Å | |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Biso*/Beq | |
C1 | 0.30211 | 0.00154 | 0.31942 | | |
N1 | 0.34787 | −0.09596 | 0.37425 | | |
C2 | 0.26424 | −0.17546 | 0.25115 | | |
C3 | 0.15294 | −0.11068 | 0.11405 | | |
N2 | 0.18063 | −0.00840 | 0.16571 | | |
O1 | 0.35167 | 0.08704 | 0.38721 | | |
O2 | 0.05431 | −0.14328 | −0.01869 | | |
H1 | 0.44054 | −0.10723 | 0.47861 | | |
H2 | 0.21592 | −0.23082 | 0.33779 | | |
H3 | 0.32271 | −0.22134 | 0.16192 | | |
H4 | 0.12369 | 0.05531 | 0.09455 | | |
Crystal data top
? | β = 98.980° |
Mr = ? | V = 1069.64 Å3 |
Monoclinic, P2_1/n | Z = ? |
a = 12.5087 Å | ? radiation, λ = ? Å |
b = 4.9545 Å | × × mm |
c = 17.4595 Å | |
Crystal data top
? | β = 98.980° |
Mr = ? | V = 1069.64 Å3 |
Monoclinic, P2_1/n | Z = ? |
a = 12.5087 Å | ? radiation, λ = ? Å |
b = 4.9545 Å | × × mm |
c = 17.4595 Å | |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Biso*/Beq | |
C1 | −0.11774 | 0.52738 | 0.17310 | | |
C2 | −0.07990 | 0.39962 | 0.11100 | | |
C3 | 0.00453 | 0.21446 | 0.12563 | | |
C4 | 0.05320 | 0.15552 | 0.20102 | | |
C5 | 0.01586 | 0.29194 | 0.26276 | | |
C6 | −0.06926 | 0.47885 | 0.24835 | | |
N7 | 0.06278 | 0.23281 | 0.33894 | | |
C8 | 0.08137 | 0.41741 | 0.39804 | | |
O9 | 0.06715 | 0.66340 | 0.38653 | | |
C10 | 0.11929 | 0.30247 | 0.47698 | | |
C11 | 0.14579 | −0.03920 | 0.21590 | | |
N12 | −0.11919 | 0.47467 | 0.03137 | | |
O13 | −0.10271 | 0.31602 | −0.02082 | | |
O14 | −0.16500 | 0.69701 | 0.01913 | | |
N15 | −0.21681 | 0.69251 | 0.16307 | | |
O16 | −0.20976 | 0.91980 | 0.19283 | | |
O17 | −0.30093 | 0.58895 | 0.12906 | | |
H18 | 0.07841 | 0.03350 | 0.35284 | | |
H19 | 0.03525 | 0.12329 | 0.07681 | | |
H20 | −0.10146 | 0.57383 | 0.29580 | | |
H21 | 0.15229 | 0.09879 | 0.47477 | | |
H22 | 0.04993 | 0.29095 | 0.50859 | | |
H23 | 0.17895 | 0.43889 | 0.50903 | | |
H24 | 0.16720 | −0.11528 | 0.16153 | | |
H25 | 0.21705 | 0.05676 | 0.24972 | | |
H26 | 0.12512 | −0.21170 | 0.25023 | | |
Crystal data top
? | β = 118.930° |
Mr = ? | V = 744.43 Å3 |
Monoclinic, P2_1/c | Z = ? |
a = 9.8094 Å | ? radiation, λ = ? Å |
b = 9.0253 Å | × × mm |
c = 9.6364 Å | |
Crystal data top
? | β = 118.930° |
Mr = ? | V = 744.43 Å3 |
Monoclinic, P2_1/c | Z = ? |
a = 9.8094 Å | ? radiation, λ = ? Å |
b = 9.0253 Å | × × mm |
c = 9.6364 Å | |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Biso*/Beq | |
N1 | −0.37842 | 0.03127 | −0.13986 | | |
C1 | −0.33541 | 0.10078 | 0.01616 | | |
C2 | −0.25065 | 0.22508 | −0.02299 | | |
C3 | −0.24901 | 0.11435 | −0.14447 | | |
H1 | −0.36946 | −0.08385 | −0.13769 | | |
H2 | −0.43364 | 0.13172 | 0.03489 | | |
H3 | −0.25346 | 0.03234 | 0.11740 | | |
H4 | −0.32775 | 0.31969 | −0.08160 | | |
H5 | −0.13888 | 0.26496 | 0.07175 | | |
H6 | −0.27564 | 0.15748 | −0.26132 | | |
H7 | −0.13900 | 0.05056 | −0.09552 | | |
N2 | −0.33858 | −0.30294 | −0.10363 | | |
C4 | −0.30378 | −0.34815 | 0.05897 | | |
C5 | −0.12768 | −0.34413 | 0.11140 | | |
C6 | −0.17797 | −0.34770 | −0.06690 | | |
H8 | −0.42664 | −0.36474 | −0.19315 | | |
H9 | −0.34722 | −0.27185 | 0.11763 | | |
H10 | −0.34489 | −0.46113 | 0.06379 | | |
H11 | −0.07322 | −0.23812 | 0.16664 | | |
H12 | −0.05538 | −0.43579 | 0.18495 | | |
H13 | −0.12013 | −0.27003 | −0.10972 | | |
H14 | −0.17203 | −0.46045 | −0.10865 | | |
Experimental details
| (1_ethane.cif) | (2_propane.cif) | (3_congressane.cif) | (4_hexamethylenetetramine.cif) |
Crystal data |
Chemical formula | ? | ? | ? | ? |
Mr | ? | ? | ? | ? |
Crystal system, space group | Monoclinic, P21/n | Monoclinic, P2_1/n | Cubic, Pa3 | Cubic, I43m |
Temperature (K) | ? | ? | ? | ? |
a, b, c (Å) | 4.225, 5.441, 5.592 | 4.1832, 12.7487, 7.0031 | 9.6325, 9.6325, 9.6325 | 6.841, 6.841, 6.841 |
α, β, γ (°) | 90, 90.416, 90 | 90, 91.033, 90 | 90, 90, 90 | 90, 90, 90 |
V (Å3) | 122.75 | 342.66 | 891.26 | 320.15 |
Z | ? | ? | ? | ? |
Radiation type | ?, λ = ? Å | ?, λ = ? Å | ?, λ = ? Å | ?, λ = ? Å |
µ (mm−1) | ? | ? | ? | ? |
Crystal size (mm) | × × | × × | × × | × × |
|
Data collection |
Diffractometer | ? | ? | ? | ? |
Absorption correction | ? | ? | ? | ? |
No. of measured, independent and observed (?) reflections | ?, ?, ? | ?, ?, ? | ?, ?, ? | ?, ?, ? |
Rint | ? | ? | ? | ? |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | ?, ?, ? | ?, ?, ? | ?, ?, ? | ?, ?, ? |
No. of reflections | ? | ? | ? | ? |
No. of parameters | ? | ? | ? | ? |
No. of restraints | ? | ? | ? | ? |
Δρmax, Δρmin (e Å−3) | ?, ? | ?, ? | ?, ? | ?, ? |
| (5_benzene_P21c.cif) | (5_benzene_Pbca.cif) | (6_methanole_P-1.cif) | (methanol_P212121) |
Crystal data |
Chemical formula | ? | ? | ? | ? |
Mr | ? | ? | ? | ? |
Crystal system, space group | Monoclinic, P21/c | Orthorhombic, Pbca | Triclinic, P1 | Orthorhombic, P212121 |
Temperature (K) | ? | ? | ? | ? |
a, b, c (Å) | 5.4170, 5.4492, 7.5320 | 7.3429, 9.1125, 6.7042 | 7.6700, 4.4101, 7.2405 | 4.8728, 4.6411, 8.8671 |
α, β, γ (°) | 90, 110.028, 90 | 90, 90, 90 | 88.100, 102.890, 93.850 | 90, 90, 90 |
V (Å3) | 208.89 | 448.59 | 238.16 | 200.53 |
Z | ? | ? | ? | ? |
Radiation type | ?, λ = ? Å | ?, λ = ? Å | ?, λ = ? Å | ?, λ = ? Å |
µ (mm−1) | ? | ? | ? | ? |
Crystal size (mm) | × × | × × | × × | × × |
|
Data collection |
Diffractometer | ? | ? | ? | ? |
Absorption correction | ? | ? | ? | ? |
No. of measured, independent and observed (?) reflections | ?, ?, ? | ?, ?, ? | ?, ?, ? | ?, ?, ? |
Rint | ? | ? | ? | ? |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | ?, ?, ? | ?, ?, ? | ?, ?, ? | ?, ?, ? |
No. of reflections | ? | ? | ? | ? |
No. of parameters | ? | ? | ? | ? |
No. of restraints | ? | ? | ? | ? |
Δρmax, Δρmin (e Å−3) | ?, ? | ?, ? | ?, ? | ?, ? |
| (7_ethanole_Pc.cif) | (7_ethanole_P21c) | (8_acetac_Pna21.cif) | (oxalic_acid_P21c.cif) |
Crystal data |
Chemical formula | ? | ? | ? | ? |
Mr | ? | ? | ? | ? |
Crystal system, space group | Monoclinic, Pc | Monoclinic, P21/c | Orthorhombic, Pna21 | Monoclinic, P21/c |
Temperature (K) | ? | ? | ? | ? |
a, b, c (Å) | 5.482, 6.962, 8.401 | 7.8260, 5.6038, 7.8470 | 13.3086, 4.0890, 5.7499 | 5.8510, 6.0150, 4.9699 |
α, β, γ (°) | 90, 100.6, 90 | 90, 114.800, 90 | 90, 90, 90 | 90, 115.830, 90 |
V (Å3) | 314.34 | 312.40 | 312.70 | 157.43 |
Z | ? | ? | ? | ? |
Radiation type | ?, λ = ? Å | ?, λ = ? Å | ?, λ = ? Å | ?, λ = ? Å |
µ (mm−1) | ? | ? | ? | ? |
Crystal size (mm) | × × | × × | × × | × × |
|
Data collection |
Diffractometer | ? | ? | ? | ? |
Absorption correction | ? | ? | ? | ? |
No. of measured, independent and observed (?) reflections | ?, ?, ? | ?, ?, ? | ?, ?, ? | ?, ?, ? |
Rint | ? | ? | ? | ? |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | ?, ?, ? | ?, ?, ? | ?, ?, ? | ?, ?, ? |
No. of reflections | ? | ? | ? | ? |
No. of parameters | ? | ? | ? | ? |
No. of restraints | ? | ? | ? | ? |
Δρmax, Δρmin (e Å−3) | ?, ? | ?, ? | ?, ? | ?, ? |
| (9_oxalic_acid_Pbca.cif) | (I_1_opt.cif) | (I_2_opt.cif) | (II_opt.cif) |
Crystal data |
Chemical formula | ? | ? | ? | ? |
Mr | ? | ? | ? | ? |
Crystal system, space group | Orthorhombic, Pcab | Orthorhombic, Pbca | Monoclinic, P2_1/c | Monoclinic, P2_1/n |
Temperature (K) | ? | ? | ? | ? |
a, b, c (Å) | 6.5594, 6.0940, 7.8524 | 5.3187, 12.4468, 14.2229 | 4.9684, 10.0375, 9.8077 | 7.2899, 8.7833, 8.8590 |
α, β, γ (°) | 90, 90, 90 | 90, 90, 90 | 90, 90.982, 90 | 90, 103.204, 90 |
V (Å3) | 313.88 | 900.33 | 455.43 | 514.25 |
Z | ? | ? | ? | ? |
Radiation type | ?, λ = ? Å | ?, λ = ? Å | ?, λ = ? Å | ?, λ = ? Å |
µ (mm−1) | ? | ? | ? | ? |
Crystal size (mm) | × × | × × | × × | × × |
|
Data collection |
Diffractometer | ? | ? | ? | ? |
Absorption correction | ? | ? | ? | ? |
No. of measured, independent and observed (?) reflections | ?, ?, ? | ?, ?, ? | ?, ?, ? | ?, ?, ? |
Rint | ? | ? | ? | ? |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | ?, ?, ? | ?, ?, ? | ?, ?, ? | ?, ?, ? |
No. of reflections | ? | ? | ? | ? |
No. of parameters | ? | ? | ? | ? |
No. of restraints | ? | ? | ? | ? |
Δρmax, Δρmin (e Å−3) | ?, ? | ?, ? | ?, ? | ?, ? |
| (III_opt.cif) | (IV_opt.cif) | (VI_opt.cif) | (VII_opt.cif) |
Crystal data |
Chemical formula | ? | ? | ? | ? |
Mr | ? | ? | ? | ? |
Crystal system, space group | Monoclinic, P2_1/c | Monoclinic, P2_1/a | Monoclinic, P2_1/c | Monoclinic, P2_1/n |
Temperature (K) | ? | ? | ? | ? |
a, b, c (Å) | 6.8127, 7.4710, 21.6413 | 8.3314, 10.6836, 8.6502 | 8.8320, 9.2134, 14.0267 | 4.1832, 12.7487, 7.0031 |
α, β, γ (°) | 90, 96.479, 90 | 90, 95.520, 90 | 90, 86.157, 90 | 90, 91.033, 90 |
V (Å3) | 1094.45 | 767.00 | 1069.64 | 342.66 |
Z | ? | ? | ? | ? |
Radiation type | ?, λ = ? Å | ?, λ = ? Å | ?, λ = ? Å | ?, λ = ? Å |
µ (mm−1) | ? | ? | ? | ? |
Crystal size (mm) | × × | × × | × × | × × |
|
Data collection |
Diffractometer | ? | ? | ? | ? |
Absorption correction | ? | ? | ? | ? |
No. of measured, independent and observed (?) reflections | ?, ?, ? | ?, ?, ? | ?, ?, ? | ?, ?, ? |
Rint | ? | ? | ? | ? |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | ?, ?, ? | ?, ?, ? | ?, ?, ? | ?, ?, ? |
No. of reflections | ? | ? | ? | ? |
No. of parameters | ? | ? | ? | ? |
No. of restraints | ? | ? | ? | ? |
Δρmax, Δρmin (e Å−3) | ?, ? | ?, ? | ?, ? | ?, ? |
| (VIII_opt.cif) | (X_opt.cif) | (XI_opt.cif) |
Crystal data |
Chemical formula | ? | ? | ? |
Mr | ? | ? | ? |
Crystal system, space group | Monoclinic, C2/c | Monoclinic, P2_1/n | Monoclinic, P2_1/c |
Temperature (K) | ? | ? | ? |
a, b, c (Å) | 9.8958, 12.7552, 6.8064 | 12.5087, 4.9545, 17.4595 | 9.8094, 9.0253, 9.6364 |
α, β, γ (°) | 90, 103.129, 90 | 90, 98.980, 90 | 90, 118.930, 90 |
V (Å3) | 836.67 | 1069.64 | 744.43 |
Z | ? | ? | ? |
Radiation type | ?, λ = ? Å | ?, λ = ? Å | ?, λ = ? Å |
µ (mm−1) | ? | ? | ? |
Crystal size (mm) | × × | × × | × × |
|
Data collection |
Diffractometer | ? | ? | ? |
Absorption correction | ? | ? | ? |
No. of measured, independent and observed (?) reflections | ?, ?, ? | ?, ?, ? | ?, ?, ? |
Rint | ? | ? | ? |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | ?, ?, ? | ?, ?, ? | ?, ?, ? |
No. of reflections | ? | ? | ? |
No. of parameters | ? | ? | ? |
No. of restraints | ? | ? | ? |
Δρmax, Δρmin (e Å−3) | ?, ? | ?, ? | ?, ? |
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