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A fixed hydrogen-bonding motif with a high probability of occurring when appropriate functional groups are involved is described as a `supramolecular hydrogen-bonding synthon'. The identification of these synthons may enable the prediction of accurate crystal structures. The rare chiral hydrogen-bonding motif
R53(10) was observed previously in a cocrystal of 2,4,6-trichlorophenol, 2,4-dichlorophenol and dicyclohexylamine. In the title solvated salt, 2C
4H
12N
+·C
6H
3Cl
2O
−·(C
6H
3Cl
2O
−·C
6H
4Cl
2O)·2C
4H
8O, five components, namely two
tert-butylammonium cations, one 2,4-dichlorophenol molecule, one 2,4-dichlorophenolate anion and one 2,6-dichlorophenolate anion, are bound by N—H
O and O—H
O hydrogen bonds to form a hydrogen-bonded ring, with the graph-set motif
R53(10), which is further associated with two pendant tetrahydrofuran molecules by N—H
O hydrogen bonds. The hydrogen-bonded ring has internal symmetry, with a twofold axis running through the centre of the 2,6-dichlorophenolate anion, and is isostructural with a previous and related structure formed from 2,4-dichlorophenol, dicyclohexylamine and 2,4,6-trichlorophenol. In the title crystal, helical columns are built by the alignment and twisting of the chiral hydrogen-bonded rings, along and across the
c axis, and successive pairs of rings are associated with each other through C—H
π interactions. Neighbouring helical columns are inversely related and, therefore, no chirality is sustained, in contrast to the previous case.
Supporting information
CCDC reference: 1501723
Data collection: SMART (Bruker, 2000); cell refinement: SMART (Bruker, 2000); data reduction: SAINT (Bruker, 2000); program(s) used to solve structure: SHELXTL (Bruker, 2000); program(s) used to refine structure: SHELXTL (Bruker, 2000); molecular graphics: SHELXTL (Bruker, 2000); software used to prepare material for publication: SHELXTL (Bruker, 2000).
Bis(
tert-butylammonium) 2,6-dichlorophenolate 2,4-dichlorophenolate
2,4-dichlorophenol tetrahydrofuran disolvate
top
Crystal data top
2C4H12N+·C6H3Cl2O−·C6H3Cl2O−·C6H4Cl2O·2C4H8O | F(000) = 1640 |
Mr = 779.46 | Dx = 1.293 Mg m−3 |
Monoclinic, I2/a | Mo Kα radiation, λ = 0.71073 Å |
a = 14.8441 (12) Å | Cell parameters from 2879 reflections |
b = 13.2872 (11) Å | θ = 2.1–23.1° |
c = 21.0311 (15) Å | µ = 0.47 mm−1 |
β = 105.191 (3)° | T = 293 K |
V = 4003.2 (5) Å3 | Prism, colorless |
Z = 4 | 0.26 × 0.22 × 0.20 mm |
Data collection top
Bruker SMART CCD area detector diffractometer | 3934 independent reflections |
Radiation source: fine-focus sealed tube | 2350 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.014 |
φ and ω scans | θmax = 26.0°, θmin = 1.8° |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | h = −9→18 |
Tmin = 0.892, Tmax = 0.935 | k = −16→16 |
10530 measured reflections | l = −25→21 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.060 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.161 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.93 | w = 1/[σ2(Fo2) + (0.0964P)2] where P = (Fo2 + 2Fc2)/3 |
3934 reflections | (Δ/σ)max < 0.001 |
221 parameters | Δρmax = 0.32 e Å−3 |
1 restraint | Δρmin = −0.32 e Å−3 |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and
goodness of fit S are based on F2, conventional R-factors R are based
on F, with F set to zero for negative F2. The threshold expression of
F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is
not relevant to the choice of reflections for refinement. R-factors based
on F2 are statistically about twice as large as those based on F, and R-
factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | Occ. (<1) |
C1 | 0.1991 (2) | −0.0150 (2) | 0.14329 (15) | 0.0509 (7) | |
C2 | 0.2370 (2) | −0.0754 (3) | 0.19683 (16) | 0.0618 (8) | |
H2 | 0.2076 | −0.0811 | 0.2307 | 0.074* | |
C3 | 0.3197 (2) | −0.1284 (2) | 0.20038 (17) | 0.0643 (8) | |
C4 | 0.3640 (2) | −0.1185 (3) | 0.15022 (17) | 0.0649 (9) | |
H4 | 0.4189 | −0.1536 | 0.1522 | 0.078* | |
C5 | 0.3258 (2) | −0.0558 (2) | 0.09677 (17) | 0.0585 (8) | |
H5 | 0.3559 | −0.0485 | 0.0634 | 0.070* | |
C6 | 0.24343 (19) | −0.0041 (2) | 0.09293 (14) | 0.0465 (6) | |
C7 | 0.2500 | 0.4651 (4) | 0.0000 | 0.0648 (13) | |
C8 | 0.2441 (2) | 0.5239 (2) | −0.05631 (18) | 0.0642 (9) | |
C9 | 0.2454 (2) | 0.6299 (3) | −0.0542 (2) | 0.0718 (10) | |
H9 | 0.2429 | 0.6633 | −0.0935 | 0.086* | |
C10 | 0.2500 | 0.6882 (4) | 0.0000 | 0.0741 (14) | |
H10 | 0.2500 | 0.7582 | 0.0000 | 0.089* | |
C11 | 0.1172 (3) | 0.2914 (3) | 0.20948 (18) | 0.0741 (10) | |
H11A | 0.1815 | 0.2974 | 0.2074 | 0.089* | |
H11B | 0.1082 | 0.2238 | 0.2241 | 0.089* | |
C12 | 0.0994 (3) | 0.3648 (3) | 0.25766 (18) | 0.0739 (10) | |
H12A | 0.1523 | 0.4094 | 0.2731 | 0.089* | |
H12B | 0.0868 | 0.3307 | 0.2952 | 0.089* | |
C13 | 0.0161 (3) | 0.4216 (3) | 0.2204 (2) | 0.0810 (11) | |
H13A | 0.0259 | 0.4935 | 0.2264 | 0.097* | |
H13B | −0.0388 | 0.4026 | 0.2344 | 0.097* | |
C14 | 0.0058 (2) | 0.3924 (3) | 0.15013 (18) | 0.0705 (10) | |
H14A | −0.0594 | 0.3796 | 0.1287 | 0.085* | |
H14B | 0.0267 | 0.4472 | 0.1271 | 0.085* | |
C15 | 0.0376 (2) | 0.2499 (2) | −0.02621 (15) | 0.0594 (8) | |
C16 | −0.0350 (2) | 0.1841 (2) | −0.01277 (16) | 0.0579 (8) | |
H16A | −0.0133 | 0.1157 | −0.0088 | 0.087* | |
H16B | −0.0906 | 0.1891 | −0.0483 | 0.087* | |
H16C | −0.0484 | 0.2046 | 0.0276 | 0.087* | |
C17 | 0.0044 (2) | 0.3600 (2) | −0.03639 (16) | 0.0568 (8) | |
H17A | 0.0533 | 0.4009 | −0.0448 | 0.085* | |
H17B | −0.0111 | 0.3837 | 0.0025 | 0.085* | |
H17C | −0.0497 | 0.3639 | −0.0732 | 0.085* | |
C18 | 0.0706 (2) | 0.2143 (3) | −0.08504 (16) | 0.0650 (9) | |
H18A | 0.1156 | 0.2610 | −0.0933 | 0.097* | |
H18B | 0.0183 | 0.2103 | −0.1231 | 0.097* | |
H18C | 0.0988 | 0.1491 | −0.0758 | 0.097* | |
Cl1 | 0.36776 (6) | −0.19802 (7) | 0.26861 (4) | 0.0711 (3) | |
Cl2 | 0.09661 (7) | 0.04388 (8) | 0.13829 (5) | 0.0863 (4) | |
Cl3 | 0.23478 (6) | 0.46070 (7) | −0.12810 (5) | 0.0731 (3) | |
N1 | 0.12112 (15) | 0.24947 (18) | 0.03209 (12) | 0.0521 (6) | |
H1A | 0.1638 | 0.2919 | 0.0250 | 0.078* | |
H1B | 0.1450 | 0.1877 | 0.0381 | 0.078* | |
H1C | 0.1041 | 0.2685 | 0.0678 | 0.078* | |
O1 | 0.20805 (14) | 0.05805 (15) | 0.04282 (10) | 0.0558 (5) | |
H1 | 0.239 (6) | 0.064 (4) | 0.012 (4) | 0.067* | 0.50 |
O2 | 0.2500 | 0.3674 (2) | 0.0000 | 0.0656 (8) | |
O3 | 0.05771 (17) | 0.30728 (18) | 0.14689 (12) | 0.0716 (7) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C1 | 0.0536 (16) | 0.0489 (17) | 0.0516 (18) | 0.0031 (13) | 0.0165 (13) | 0.0024 (14) |
C2 | 0.070 (2) | 0.067 (2) | 0.052 (2) | 0.0007 (16) | 0.0222 (16) | 0.0078 (17) |
C3 | 0.0656 (19) | 0.063 (2) | 0.059 (2) | 0.0059 (16) | 0.0082 (15) | 0.0116 (17) |
C4 | 0.0634 (19) | 0.066 (2) | 0.062 (2) | 0.0101 (16) | 0.0093 (16) | 0.0183 (17) |
C5 | 0.0537 (17) | 0.060 (2) | 0.064 (2) | 0.0094 (14) | 0.0197 (15) | 0.0093 (16) |
C6 | 0.0552 (16) | 0.0427 (15) | 0.0419 (16) | 0.0025 (13) | 0.0134 (12) | 0.0037 (13) |
C7 | 0.052 (2) | 0.076 (4) | 0.067 (3) | 0.000 | 0.017 (2) | 0.000 |
C8 | 0.0595 (19) | 0.057 (2) | 0.078 (2) | −0.0220 (15) | 0.0229 (16) | −0.0088 (18) |
C9 | 0.073 (2) | 0.062 (2) | 0.086 (3) | −0.0099 (17) | 0.0310 (19) | 0.016 (2) |
C10 | 0.069 (3) | 0.077 (3) | 0.080 (4) | 0.000 | 0.024 (3) | 0.000 |
C11 | 0.095 (3) | 0.067 (2) | 0.068 (2) | 0.0114 (18) | 0.033 (2) | −0.0109 (19) |
C12 | 0.101 (3) | 0.066 (2) | 0.062 (2) | −0.004 (2) | 0.033 (2) | 0.0143 (19) |
C13 | 0.100 (3) | 0.067 (2) | 0.087 (3) | −0.001 (2) | 0.045 (2) | −0.020 (2) |
C14 | 0.078 (2) | 0.069 (2) | 0.073 (2) | 0.0088 (17) | 0.0340 (18) | −0.0170 (19) |
C15 | 0.0693 (19) | 0.061 (2) | 0.0497 (19) | 0.0106 (15) | 0.0198 (15) | 0.0085 (16) |
C16 | 0.0612 (17) | 0.0589 (19) | 0.0572 (19) | −0.0088 (14) | 0.0219 (14) | 0.0108 (16) |
C17 | 0.0656 (18) | 0.0485 (18) | 0.0560 (19) | 0.0119 (14) | 0.0154 (14) | 0.0123 (15) |
C18 | 0.078 (2) | 0.066 (2) | 0.053 (2) | 0.0119 (16) | 0.0203 (16) | −0.0039 (17) |
Cl1 | 0.0753 (5) | 0.0756 (6) | 0.0632 (5) | 0.0068 (4) | 0.0196 (4) | 0.0216 (5) |
Cl2 | 0.0821 (6) | 0.1018 (8) | 0.0887 (7) | 0.0411 (5) | 0.0464 (5) | 0.0324 (6) |
Cl3 | 0.0834 (6) | 0.0701 (6) | 0.0747 (6) | 0.0028 (4) | 0.0365 (5) | −0.0092 (5) |
N1 | 0.0513 (13) | 0.0557 (15) | 0.0462 (14) | 0.0134 (11) | 0.0070 (11) | 0.0074 (12) |
O1 | 0.0643 (13) | 0.0600 (13) | 0.0469 (13) | 0.0141 (10) | 0.0216 (9) | 0.0109 (10) |
O2 | 0.077 (2) | 0.057 (2) | 0.068 (2) | 0.000 | 0.0270 (16) | 0.000 |
O3 | 0.0872 (16) | 0.0744 (16) | 0.0591 (15) | −0.0187 (12) | 0.0295 (12) | −0.0182 (12) |
Geometric parameters (Å, º) top
C1—C2 | 1.378 (4) | C12—H12A | 0.9700 |
C1—C6 | 1.393 (4) | C12—H12B | 0.9700 |
C1—Cl2 | 1.689 (3) | C13—C14 | 1.496 (5) |
C2—C3 | 1.400 (4) | C13—H13A | 0.9700 |
C2—H2 | 0.9300 | C13—H13B | 0.9700 |
C3—C4 | 1.387 (5) | C14—O3 | 1.380 (4) |
C3—Cl1 | 1.699 (3) | C14—H14A | 0.9700 |
C4—C5 | 1.395 (4) | C14—H14B | 0.9700 |
C4—H4 | 0.9300 | C15—C16 | 1.472 (4) |
C5—C6 | 1.386 (4) | C15—N1 | 1.498 (4) |
C5—H5 | 0.9300 | C15—C18 | 1.521 (4) |
C6—O1 | 1.334 (3) | C15—C17 | 1.540 (4) |
C7—O2 | 1.299 (6) | C16—H16A | 0.9600 |
C7—C8 | 1.402 (4) | C16—H16B | 0.9600 |
C7—C8i | 1.402 (4) | C16—H16C | 0.9600 |
C8—C9 | 1.409 (4) | C17—H17A | 0.9600 |
C8—Cl3 | 1.702 (4) | C17—H17B | 0.9600 |
C9—C10 | 1.365 (5) | C17—H17C | 0.9600 |
C9—H9 | 0.9300 | C18—H18A | 0.9600 |
C10—C9i | 1.365 (5) | C18—H18B | 0.9600 |
C10—H10 | 0.9300 | C18—H18C | 0.9600 |
C11—O3 | 1.396 (4) | N1—H1A | 0.8900 |
C11—C12 | 1.479 (5) | N1—H1B | 0.8900 |
C11—H11A | 0.9700 | N1—H1C | 0.8900 |
C11—H11B | 0.9700 | O1—H1 | 0.885 (10) |
C12—C13 | 1.484 (5) | | |
| | | |
C2—C1—C6 | 120.6 (3) | C12—C13—H13A | 110.9 |
C2—C1—Cl2 | 119.3 (2) | C14—C13—H13A | 110.9 |
C6—C1—Cl2 | 120.1 (2) | C12—C13—H13B | 110.9 |
C1—C2—C3 | 120.1 (3) | C14—C13—H13B | 110.9 |
C1—C2—H2 | 120.0 | H13A—C13—H13B | 108.9 |
C3—C2—H2 | 120.0 | O3—C14—C13 | 110.3 (3) |
C4—C3—C2 | 119.7 (3) | O3—C14—H14A | 109.6 |
C4—C3—Cl1 | 121.1 (3) | C13—C14—H14A | 109.6 |
C2—C3—Cl1 | 119.1 (3) | O3—C14—H14B | 109.6 |
C3—C4—C5 | 119.7 (3) | C13—C14—H14B | 109.6 |
C3—C4—H4 | 120.1 | H14A—C14—H14B | 108.1 |
C5—C4—H4 | 120.1 | C16—C15—N1 | 109.3 (3) |
C6—C5—C4 | 120.6 (3) | C16—C15—C18 | 112.3 (3) |
C6—C5—H5 | 119.7 | N1—C15—C18 | 106.9 (2) |
C4—C5—H5 | 119.7 | C16—C15—C17 | 111.5 (3) |
O1—C6—C5 | 120.8 (3) | N1—C15—C17 | 106.5 (3) |
O1—C6—C1 | 119.9 (2) | C18—C15—C17 | 110.0 (3) |
C5—C6—C1 | 119.3 (3) | C15—C16—H16A | 109.5 |
O2—C7—C8 | 123.9 (2) | C15—C16—H16B | 109.5 |
O2—C7—C8i | 123.9 (2) | H16A—C16—H16B | 109.5 |
C8—C7—C8i | 112.3 (5) | C15—C16—H16C | 109.5 |
C7—C8—C9 | 122.2 (4) | H16A—C16—H16C | 109.5 |
C7—C8—Cl3 | 116.5 (3) | H16B—C16—H16C | 109.5 |
C9—C8—Cl3 | 121.3 (3) | C15—C17—H17A | 109.5 |
C10—C9—C8 | 126.2 (4) | C15—C17—H17B | 109.5 |
C10—C9—H9 | 116.9 | H17A—C17—H17B | 109.5 |
C8—C9—H9 | 116.9 | C15—C17—H17C | 109.5 |
C9—C10—C9i | 110.8 (5) | H17A—C17—H17C | 109.5 |
C9—C10—H10 | 124.6 | H17B—C17—H17C | 109.5 |
C9i—C10—H10 | 124.6 | C15—C18—H18A | 109.5 |
O3—C11—C12 | 111.3 (3) | C15—C18—H18B | 109.5 |
O3—C11—H11A | 109.4 | H18A—C18—H18B | 109.5 |
C12—C11—H11A | 109.4 | C15—C18—H18C | 109.5 |
O3—C11—H11B | 109.4 | H18A—C18—H18C | 109.5 |
C12—C11—H11B | 109.2 | H18B—C18—H18C | 109.5 |
H11A—C11—H11B | 108.0 | C15—N1—H1A | 109.5 |
C11—C12—C13 | 104.3 (3) | C15—N1—H1B | 109.5 |
C11—C12—H12A | 110.9 | H1A—N1—H1B | 109.5 |
C13—C12—H12A | 110.9 | C15—N1—H1C | 109.5 |
C11—C12—H12B | 110.9 | H1A—N1—H1C | 109.5 |
C13—C12—H12B | 110.9 | H1B—N1—H1C | 109.5 |
H12A—C12—H12B | 108.9 | C6—O1—H1 | 117 (5) |
C12—C13—C14 | 104.2 (3) | C14—O3—C11 | 107.5 (3) |
| | | |
C6—C1—C2—C3 | −1.3 (5) | O2—C7—C8—C9 | −179.2 (2) |
Cl2—C1—C2—C3 | 177.1 (3) | C8i—C7—C8—C9 | 0.8 (2) |
C1—C2—C3—C4 | 0.9 (5) | O2—C7—C8—Cl3 | 0.9 (3) |
C1—C2—C3—Cl1 | 177.1 (3) | C8i—C7—C8—Cl3 | −179.1 (3) |
C2—C3—C4—C5 | 0.2 (5) | C7—C8—C9—C10 | −1.8 (5) |
Cl1—C3—C4—C5 | −176.0 (3) | Cl3—C8—C9—C10 | 178.1 (2) |
C3—C4—C5—C6 | −0.8 (5) | C8—C9—C10—C9i | 0.9 (2) |
C4—C5—C6—O1 | 178.2 (3) | O3—C11—C12—C13 | 5.6 (4) |
C4—C5—C6—C1 | 0.4 (5) | C11—C12—C13—C14 | −12.4 (4) |
C2—C1—C6—O1 | −177.1 (3) | C12—C13—C14—O3 | 16.0 (4) |
Cl2—C1—C6—O1 | 4.4 (4) | C13—C14—O3—C11 | −12.8 (4) |
C2—C1—C6—C5 | 0.7 (5) | C12—C11—O3—C14 | 4.3 (4) |
Cl2—C1—C6—C5 | −177.8 (2) | | |
Symmetry code: (i) −x+1/2, y, −z. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O2 | 0.89 | 1.81 | 2.691 (3) | 172 |
N1—H1B···O1 | 0.89 | 1.96 | 2.837 (4) | 171 |
N1—H1C···O3 | 0.89 | 2.03 | 2.915 (4) | 176 |
O1—H1···O1i | 0.89 | 1.56 | 2.444 (3) | 173 |
Symmetry code: (i) −x+1/2, y, −z. |
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