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In contrast to Se[CH
2C(O)OH]
2 versus S[CH
2C(O)OH]
2, the title compound, Se[CH
2CH
2C(O)OH]
2 or C
6H
10O
4Se, is structurally quite similar to its sulfur analogue. The molecule has twofold symmetry. The C-Se-C bond angle is 96.48 (8)° and the Se-C bond lengths are 1.9610 (14) Å. The shortest Se
O intermolecular distance is 3.5410 (11) Å. The O
O distances in the carboxylic acid dimers are 2.684 (2) Å. The temperature dependence of the IR spectrum suggests tautomerism in the solid state.
Supporting information
CCDC reference: 163918
Data collection: SMART (Bruker, 1999); cell refinement: SAINT (Bruker, 1998); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1990); program(s) used to refine structure: SHELXTL (Sheldrick, 1997); molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
3,3'-Selenobis(propionic acid)
top
Crystal data top
C6H10O4Se | ? # Insert any comments here. |
Mr = 225.10 | Dx = 1.859 Mg m−3 |
Orthorhombic, Pbcn | Melting point: 148° C K |
Hall symbol: -P 2n 2ab | Mo Kα radiation, λ = 0.71073 Å |
a = 8.5981 (3) Å | Cell parameters from 8192 reflections |
b = 5.1355 (2) Å | θ = 2.2–33.2° |
c = 18.2159 (7) Å | µ = 4.63 mm−1 |
V = 804.33 (5) Å3 | T = 253 K |
Z = 4 | Flat prism, colourless |
F(000) = 448 | 0.33 × 0.25 × 0.07 mm |
Data collection top
Bruker AXS SMART 2K CCD diffractometer | 1481 independent reflections |
Radiation source: normal focus sealed tube | 1149 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.023 |
ω scans | θmax = 33.2°, θmin = 2.2° |
Absorption correction: numerical (SHELXTL; Sheldrick 1997) | h = −13→13 |
Tmin = 0.296, Tmax = 0.724 | k = −7→7 |
13334 measured reflections | l = −26→26 |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.023 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.061 | w = 1/[σ2(Fo2) + (0.0307P)2 + 0.1506P] where P = (Fo2 + 2Fc2)/3 |
S = 1.15 | (Δ/σ)max < 0.001 |
1481 reflections | Δρmax = 0.43 e Å−3 |
56 parameters | Δρmin = −0.54 e Å−3 |
1 restraint | Extinction correction: SHELXTL (Sheldrick, 1997), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0075 (9) |
Special details top
Experimental. ? #Insert any special details here. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Se | 0.0000 | 0.18817 (4) | 0.2500 | 0.02676 (8) | |
O1 | −0.07447 (15) | 0.8829 (2) | 0.07928 (6) | 0.0362 (3) | |
O2 | 0.13517 (14) | 0.7398 (3) | 0.01856 (7) | 0.0379 (3) | |
H2 | 0.114 (3) | 0.858 (4) | −0.0087 (12) | 0.052 (6)* | |
C1 | −0.06493 (16) | 0.4425 (3) | 0.17578 (8) | 0.0258 (3) | |
H1A | −0.1455 | 0.3671 | 0.1452 | 0.039* | |
H1B | −0.1079 | 0.5948 | 0.1999 | 0.039* | |
C2 | 0.07177 (16) | 0.5231 (3) | 0.12815 (8) | 0.0282 (3) | |
H2A | 0.1548 | 0.5846 | 0.1597 | 0.042* | |
H2B | 0.1099 | 0.3708 | 0.1023 | 0.042* | |
C3 | 0.03509 (17) | 0.7322 (3) | 0.07267 (9) | 0.0247 (3) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Se | 0.03895 (13) | 0.02022 (10) | 0.02111 (11) | 0.000 | 0.00105 (8) | 0.000 |
O1 | 0.0414 (6) | 0.0361 (6) | 0.0310 (6) | 0.0112 (5) | 0.0049 (5) | 0.0081 (5) |
O2 | 0.0415 (6) | 0.0388 (6) | 0.0333 (6) | 0.0074 (5) | 0.0118 (5) | 0.0142 (5) |
C1 | 0.0266 (6) | 0.0274 (7) | 0.0234 (6) | 0.0015 (6) | −0.0004 (5) | 0.0031 (5) |
C2 | 0.0265 (6) | 0.0308 (7) | 0.0273 (7) | 0.0005 (6) | −0.0003 (5) | 0.0075 (6) |
C3 | 0.0269 (6) | 0.0254 (6) | 0.0218 (6) | −0.0026 (5) | −0.0011 (5) | 0.0002 (5) |
Geometric parameters (Å, º) top
Se—C1i | 1.9610 (14) | C2—H2A | 0.9700 |
Se—C1 | 1.9610 (14) | C2—H2B | 0.9700 |
C1—C2 | 1.518 (2) | O1—C3 | 1.225 (2) |
C1—H1A | 0.9700 | O2—C3 | 1.3091 (18) |
C1—H1B | 0.9700 | O2—H2 | 0.804 (19) |
C2—C3 | 1.508 (2) | | |
| | | |
C1i—Se—C1 | 96.48 (8) | C3—C2—H2A | 108.6 |
C3—O2—H2 | 109.9 (16) | C1—C2—H2A | 108.6 |
C2—C1—Se | 110.80 (10) | C3—C2—H2B | 108.6 |
C2—C1—H1A | 109.5 | C1—C2—H2B | 108.6 |
Se—C1—H1A | 109.5 | H2A—C2—H2B | 107.6 |
C2—C1—H1B | 109.5 | O1—C3—O2 | 124.11 (15) |
Se—C1—H1B | 109.5 | O1—C3—C2 | 123.02 (14) |
H1A—C1—H1B | 108.1 | O2—C3—C2 | 112.84 (13) |
C3—C2—C1 | 114.52 (12) | | |
| | | |
C1i—Se—C1—C2 | 87.04 (10) | C1—C2—C3—O1 | 22.4 (2) |
Se—C1—C2—C3 | −176.08 (11) | C1—C2—C3—O2 | −159.64 (14) |
Symmetry code: (i) −x, y, −z+1/2. |
Selected torsion angles (°) for
S(CH2CH2C(O)OH)2 (Prout & Hernandez-Cassou, 1982) topC1-S-C1-C2 | 85.0 (2) |
S-C1-C2-C3 | -176.0 (2) |
C1-C2-C3-O1 | 21.6 (2) |
C1-C2-C3-O2 | -160.6 (2) |
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