Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S0108270107064578/sf3065sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S0108270107064578/sf3065Isup2.hkl |
CCDC reference: 681520
For related literature, see: Almeida Paz & Kilnowski (2004); Cheng et al. (2004); Gomez-Lor, Gutierrez-Puebla, Iglesias, Monge, Ruiz-Valero & Snejko (2005); Majumder et al. (2005); Plater et al. (2001); Qiu et al. (2005); Serre et al. (2004); Shi et al. (2003, 2004); Wang et al. (2003); Ying & Mao (2004); Zheng et al. (2004).
The title compound was prepared by hydrothermal methods. A mixture of Cd(NO3)2·6H2O (0.17 g 0.5 mmol), H3BTC (0.13 g 0.6 mmol), 1,10-phenanthroline (0.1 g 0.6 mmol), oxalic acid (0.027 g 0.3 mmol), benzotriazole (0.06 g 0.5 mmol) and water (10 ml) was stirred for 20 min in air. The mixture was then transferred to a 23 ml Teflon reactor and kept at 433 K for 72 h under autogenous pressure. Crystals suitable for X-ray analysis were obtained after the mixture was cooled to room temperature.
All H atoms were initially located in a difference Fourier map. H atoms of hydroxy groups and water molecules were then constrained to an ideal geometry with O—H distances of 0.85 Å and Uiso(H) values of 1.5Ueq(O). All other H atoms were placed in geometrically idealized positions and constrained to ride on their parent atoms with C—H distances of 0.93 Å, an N—H distance of 0.86 Å and Uiso(H) values of 1.2Ueq(C,N).
Data collection: PROCESS-AUTO (Rigaku, 1998); cell refinement: PROCESS-AUTO (Rigaku, 1998); data reduction: PROCESS-AUTO (Rigaku, 1998); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEPIII (Burnett & Johnson, 1996), ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2005); software used to prepare material for publication: SHELXTL (Bruker, 2001).
[Cd(C2O4)(C9H6O6)(C12H8N2)]·C6H5N3·H2O | Z = 2 |
Mr = 727.91 | F(000) = 732 |
Triclinic, P1 | Dx = 1.750 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 9.4531 (19) Å | Cell parameters from 13575 reflections |
b = 10.869 (2) Å | θ = 3.0–27.5° |
c = 14.100 (3) Å | µ = 0.87 mm−1 |
α = 87.86 (3)° | T = 298 K |
β = 73.28 (3)° | Block, colorless |
γ = 84.63 (3)° | 0.26 × 0.25 × 0.16 mm |
V = 1381.3 (5) Å3 |
Rigaku R-AXIS RAPID IP diffractometer | 6247 independent reflections |
Radiation source: fine-focus sealed tube | 4186 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.073 |
Detector resolution: 0.01 pixels mm-1 | θmax = 27.5°, θmin = 3.0° |
ω scans | h = −12→12 |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | k = −14→14 |
Tmin = 0.806, Tmax = 0.874 | l = −17→18 |
13575 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.056 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.119 | H-atom parameters constrained |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0392P)2 + 1.7244P] where P = (Fo2 + 2Fc2)/3 |
6247 reflections | (Δ/σ)max < 0.001 |
415 parameters | Δρmax = 0.77 e Å−3 |
1 restraint | Δρmin = −1.12 e Å−3 |
[Cd(C2O4)(C9H6O6)(C12H8N2)]·C6H5N3·H2O | γ = 84.63 (3)° |
Mr = 727.91 | V = 1381.3 (5) Å3 |
Triclinic, P1 | Z = 2 |
a = 9.4531 (19) Å | Mo Kα radiation |
b = 10.869 (2) Å | µ = 0.87 mm−1 |
c = 14.100 (3) Å | T = 298 K |
α = 87.86 (3)° | 0.26 × 0.25 × 0.16 mm |
β = 73.28 (3)° |
Rigaku R-AXIS RAPID IP diffractometer | 6247 independent reflections |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | 4186 reflections with I > 2σ(I) |
Tmin = 0.806, Tmax = 0.874 | Rint = 0.073 |
13575 measured reflections |
R[F2 > 2σ(F2)] = 0.056 | 1 restraint |
wR(F2) = 0.119 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.77 e Å−3 |
6247 reflections | Δρmin = −1.12 e Å−3 |
415 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cd1 | 0.25785 (4) | 0.16874 (3) | 0.45375 (3) | 0.02870 (12) | |
O1 | 0.3962 (5) | 0.0266 (3) | −0.1666 (3) | 0.0486 (10) | |
O2 | 0.5701 (5) | 0.1450 (3) | −0.2533 (3) | 0.0459 (10) | |
H1 | 0.5782 | 0.0942 | −0.2993 | 0.069* | |
O4 | 0.7595 (4) | 0.4547 (3) | −0.0909 (3) | 0.0463 (10) | |
H2 | 0.7843 | 0.5214 | −0.0731 | 0.070* | |
O3 | 0.6867 (5) | 0.4668 (4) | 0.0728 (3) | 0.0612 (13) | |
O5 | 0.3123 (5) | 0.2107 (4) | 0.2699 (3) | 0.0500 (11) | |
O6 | 0.2047 (4) | 0.0848 (3) | 0.1978 (3) | 0.0480 (10) | |
H3 | 0.1543 | 0.0740 | 0.2575 | 0.072* | |
O7 | 0.4061 (4) | 0.1331 (3) | 0.5625 (2) | 0.0330 (8) | |
O8 | 0.5869 (4) | 0.0063 (3) | 0.5938 (2) | 0.0329 (8) | |
O9 | −0.0845 (4) | −0.0802 (3) | 0.6070 (2) | 0.0354 (8) | |
O10 | 0.1028 (4) | 0.0381 (3) | 0.5778 (3) | 0.0390 (9) | |
C1 | 0.3917 (5) | 0.1986 (4) | 0.0953 (3) | 0.0271 (10) | |
C2 | 0.3884 (6) | 0.1408 (4) | 0.0104 (4) | 0.0327 (12) | |
H2A | 0.3247 | 0.0793 | 0.0142 | 0.039* | |
C3 | 0.4805 (6) | 0.1749 (4) | −0.0807 (3) | 0.0297 (11) | |
C4 | 0.5771 (6) | 0.2653 (4) | −0.0873 (4) | 0.0335 (12) | |
H4A | 0.6406 | 0.2860 | −0.1483 | 0.040* | |
C5 | 0.5786 (6) | 0.3252 (4) | −0.0012 (4) | 0.0303 (11) | |
C6 | 0.4871 (6) | 0.2906 (4) | 0.0885 (4) | 0.0317 (11) | |
H6A | 0.4890 | 0.3293 | 0.1458 | 0.038* | |
C7 | 0.3011 (6) | 0.1660 (5) | 0.1951 (4) | 0.0334 (12) | |
C8 | 0.4779 (6) | 0.1075 (4) | −0.1706 (4) | 0.0324 (12) | |
C9 | 0.6803 (6) | 0.4218 (5) | −0.0023 (4) | 0.0348 (12) | |
C10 | 0.5094 (7) | 0.3610 (5) | 0.3434 (4) | 0.0416 (14) | |
H10A | 0.5596 | 0.2904 | 0.3100 | 0.050* | |
C11 | 0.5716 (7) | 0.4726 (6) | 0.3180 (4) | 0.0495 (16) | |
H11A | 0.6596 | 0.4766 | 0.2675 | 0.059* | |
C12 | 0.5023 (7) | 0.5759 (6) | 0.3679 (5) | 0.0502 (16) | |
H12A | 0.5433 | 0.6512 | 0.3523 | 0.060* | |
C13 | 0.3690 (7) | 0.5687 (5) | 0.4428 (4) | 0.0402 (14) | |
C14 | 0.2895 (8) | 0.6719 (5) | 0.4999 (5) | 0.0506 (17) | |
H14A | 0.3271 | 0.7488 | 0.4871 | 0.061* | |
C15 | 0.1615 (8) | 0.6614 (5) | 0.5718 (5) | 0.0510 (16) | |
H15A | 0.1133 | 0.7300 | 0.6087 | 0.061* | |
C16 | 0.0998 (6) | 0.5446 (5) | 0.5912 (4) | 0.0369 (13) | |
C17 | −0.0364 (7) | 0.5321 (6) | 0.6623 (4) | 0.0488 (16) | |
H17A | −0.0880 | 0.5996 | 0.6993 | 0.059* | |
C18 | −0.0919 (7) | 0.4204 (6) | 0.6763 (4) | 0.0484 (15) | |
H18A | −0.1821 | 0.4102 | 0.7233 | 0.058* | |
C19 | −0.0128 (6) | 0.3208 (5) | 0.6196 (4) | 0.0408 (13) | |
H19A | −0.0522 | 0.2445 | 0.6299 | 0.049* | |
C20 | 0.1721 (6) | 0.4420 (4) | 0.5371 (4) | 0.0327 (12) | |
C21 | 0.3114 (6) | 0.4526 (4) | 0.4619 (4) | 0.0309 (11) | |
C22 | 0.0072 (5) | −0.0119 (4) | 0.5524 (4) | 0.0256 (10) | |
C23 | 0.4963 (6) | 0.0410 (4) | 0.5446 (3) | 0.0267 (11) | |
C24 | 0.9473 (6) | 0.6964 (5) | 0.0006 (4) | 0.0391 (13) | |
C25 | 0.8760 (7) | 0.6869 (6) | 0.1018 (5) | 0.0538 (16) | |
H25A | 0.8084 | 0.6285 | 0.1267 | 0.065* | |
C26 | 0.9099 (9) | 0.7671 (6) | 0.1628 (5) | 0.065 (2) | |
H26A | 0.8634 | 0.7639 | 0.2305 | 0.078* | |
C27 | 1.0133 (9) | 0.8541 (6) | 0.1253 (6) | 0.069 (2) | |
H27A | 1.0339 | 0.9063 | 0.1695 | 0.083* | |
C28 | 1.0843 (8) | 0.8656 (6) | 0.0280 (6) | 0.0599 (19) | |
H28A | 1.1532 | 0.9231 | 0.0039 | 0.072* | |
C29 | 1.0467 (7) | 0.7848 (5) | −0.0342 (5) | 0.0445 (14) | |
N1 | 0.3820 (5) | 0.3495 (4) | 0.4128 (3) | 0.0297 (9) | |
N2 | 0.1159 (5) | 0.3299 (4) | 0.5516 (3) | 0.0329 (10) | |
N3 | 0.9349 (6) | 0.6333 (4) | −0.0780 (4) | 0.0489 (13) | |
N4 | 1.0211 (6) | 0.6779 (5) | −0.1586 (4) | 0.0562 (14) | |
N5 | 1.0893 (6) | 0.7689 (4) | −0.1338 (4) | 0.0525 (13) | |
H5A | 1.1518 | 0.8116 | −0.1754 | 0.063* | |
O1W | 0.2543 (5) | −0.0888 (4) | 0.7141 (3) | 0.0547 (11) | |
H4 | 0.3013 | −0.0447 | 0.7410 | 0.082* | |
H5 | 0.2266 | −0.0444 | 0.6707 | 0.082* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cd1 | 0.0316 (2) | 0.02563 (18) | 0.0303 (2) | −0.00916 (14) | −0.00884 (16) | −0.00132 (14) |
O1 | 0.062 (3) | 0.047 (2) | 0.043 (2) | −0.025 (2) | −0.018 (2) | −0.0085 (19) |
O2 | 0.066 (3) | 0.049 (2) | 0.0216 (19) | −0.019 (2) | −0.0054 (19) | −0.0065 (17) |
O4 | 0.060 (3) | 0.049 (2) | 0.029 (2) | −0.033 (2) | −0.002 (2) | −0.0009 (17) |
O3 | 0.081 (3) | 0.072 (3) | 0.035 (2) | −0.051 (3) | −0.009 (2) | −0.008 (2) |
O5 | 0.065 (3) | 0.060 (3) | 0.027 (2) | −0.038 (2) | −0.007 (2) | −0.0065 (19) |
O6 | 0.058 (3) | 0.058 (2) | 0.030 (2) | −0.037 (2) | −0.006 (2) | −0.0001 (18) |
O7 | 0.039 (2) | 0.0296 (18) | 0.0340 (19) | 0.0001 (16) | −0.0165 (18) | −0.0099 (15) |
O8 | 0.040 (2) | 0.0326 (18) | 0.0311 (19) | −0.0011 (16) | −0.0169 (18) | −0.0079 (15) |
O9 | 0.035 (2) | 0.045 (2) | 0.0267 (18) | −0.0186 (17) | −0.0071 (17) | 0.0048 (16) |
O10 | 0.042 (2) | 0.045 (2) | 0.036 (2) | −0.0224 (18) | −0.0155 (18) | 0.0042 (17) |
C1 | 0.029 (3) | 0.030 (2) | 0.021 (2) | −0.006 (2) | −0.003 (2) | −0.004 (2) |
C2 | 0.039 (3) | 0.027 (2) | 0.034 (3) | −0.011 (2) | −0.012 (3) | −0.004 (2) |
C3 | 0.036 (3) | 0.031 (3) | 0.023 (2) | −0.006 (2) | −0.010 (2) | −0.006 (2) |
C4 | 0.040 (3) | 0.033 (3) | 0.026 (3) | −0.005 (2) | −0.006 (2) | −0.001 (2) |
C5 | 0.033 (3) | 0.032 (3) | 0.027 (3) | −0.009 (2) | −0.007 (2) | −0.003 (2) |
C6 | 0.036 (3) | 0.034 (3) | 0.025 (3) | −0.012 (2) | −0.006 (2) | −0.005 (2) |
C7 | 0.033 (3) | 0.037 (3) | 0.030 (3) | −0.011 (2) | −0.006 (2) | −0.004 (2) |
C8 | 0.040 (3) | 0.032 (3) | 0.028 (3) | −0.002 (2) | −0.013 (3) | −0.003 (2) |
C9 | 0.040 (3) | 0.036 (3) | 0.031 (3) | −0.012 (2) | −0.012 (3) | −0.002 (2) |
C10 | 0.043 (3) | 0.052 (3) | 0.032 (3) | −0.016 (3) | −0.011 (3) | 0.002 (3) |
C11 | 0.044 (4) | 0.071 (4) | 0.039 (3) | −0.028 (3) | −0.015 (3) | 0.014 (3) |
C12 | 0.059 (4) | 0.047 (3) | 0.055 (4) | −0.028 (3) | −0.028 (4) | 0.018 (3) |
C13 | 0.047 (4) | 0.034 (3) | 0.052 (4) | −0.018 (3) | −0.032 (3) | 0.008 (3) |
C14 | 0.070 (5) | 0.022 (3) | 0.077 (5) | −0.011 (3) | −0.047 (4) | 0.000 (3) |
C15 | 0.064 (5) | 0.031 (3) | 0.066 (4) | 0.002 (3) | −0.033 (4) | −0.014 (3) |
C16 | 0.043 (3) | 0.035 (3) | 0.037 (3) | −0.002 (2) | −0.017 (3) | −0.009 (2) |
C17 | 0.054 (4) | 0.050 (4) | 0.045 (4) | 0.015 (3) | −0.021 (3) | −0.018 (3) |
C18 | 0.039 (4) | 0.069 (4) | 0.033 (3) | 0.000 (3) | −0.005 (3) | −0.004 (3) |
C19 | 0.044 (4) | 0.047 (3) | 0.032 (3) | −0.008 (3) | −0.009 (3) | −0.001 (3) |
C20 | 0.041 (3) | 0.030 (3) | 0.035 (3) | −0.002 (2) | −0.024 (3) | −0.002 (2) |
C21 | 0.038 (3) | 0.031 (3) | 0.030 (3) | −0.010 (2) | −0.017 (3) | 0.001 (2) |
C22 | 0.023 (3) | 0.025 (2) | 0.030 (3) | −0.008 (2) | −0.006 (2) | −0.001 (2) |
C23 | 0.034 (3) | 0.027 (2) | 0.020 (2) | −0.013 (2) | −0.005 (2) | −0.001 (2) |
C24 | 0.043 (3) | 0.037 (3) | 0.045 (3) | −0.012 (3) | −0.023 (3) | 0.002 (3) |
C25 | 0.058 (4) | 0.056 (4) | 0.053 (4) | −0.016 (3) | −0.020 (4) | 0.001 (3) |
C26 | 0.084 (6) | 0.067 (5) | 0.055 (4) | −0.004 (4) | −0.036 (4) | −0.005 (4) |
C27 | 0.082 (6) | 0.051 (4) | 0.092 (6) | −0.003 (4) | −0.050 (5) | −0.025 (4) |
C28 | 0.060 (5) | 0.039 (3) | 0.095 (6) | −0.011 (3) | −0.042 (5) | −0.001 (4) |
C29 | 0.042 (3) | 0.035 (3) | 0.060 (4) | −0.008 (3) | −0.020 (3) | 0.004 (3) |
N1 | 0.032 (2) | 0.032 (2) | 0.028 (2) | −0.0083 (19) | −0.010 (2) | −0.0023 (18) |
N2 | 0.038 (3) | 0.032 (2) | 0.032 (2) | −0.0082 (19) | −0.013 (2) | −0.0004 (19) |
N3 | 0.054 (3) | 0.053 (3) | 0.044 (3) | −0.029 (3) | −0.015 (3) | 0.004 (2) |
N4 | 0.063 (4) | 0.057 (3) | 0.053 (3) | −0.028 (3) | −0.018 (3) | 0.003 (3) |
N5 | 0.054 (3) | 0.051 (3) | 0.053 (3) | −0.024 (3) | −0.013 (3) | 0.013 (3) |
O1W | 0.073 (3) | 0.050 (2) | 0.050 (3) | −0.028 (2) | −0.025 (2) | 0.007 (2) |
Cd1—O8i | 2.287 (3) | C12—C13 | 1.399 (8) |
Cd1—N2 | 2.334 (4) | C12—H12A | 0.9300 |
Cd1—O9ii | 2.347 (3) | C13—C21 | 1.407 (7) |
Cd1—N1 | 2.351 (4) | C13—C14 | 1.425 (8) |
Cd1—O7 | 2.357 (3) | C14—C15 | 1.348 (9) |
Cd1—O10 | 2.440 (4) | C14—H14A | 0.9300 |
Cd1—O5 | 2.525 (4) | C15—C16 | 1.431 (8) |
O1—C8 | 1.213 (6) | C15—H15A | 0.9300 |
O2—C8 | 1.316 (6) | C16—C20 | 1.383 (7) |
O2—H1 | 0.8500 | C16—C17 | 1.401 (8) |
O4—C9 | 1.315 (6) | C17—C18 | 1.352 (8) |
O4—H2 | 0.8500 | C17—H17A | 0.9300 |
O3—C9 | 1.201 (6) | C18—C19 | 1.393 (8) |
O5—C7 | 1.214 (6) | C18—H18A | 0.9300 |
O6—C7 | 1.319 (6) | C19—N2 | 1.324 (7) |
O6—H3 | 0.8499 | C19—H19A | 0.9300 |
O7—C23 | 1.236 (6) | C20—N2 | 1.360 (6) |
O8—C23 | 1.273 (5) | C20—C21 | 1.445 (7) |
O8—Cd1i | 2.287 (3) | C21—N1 | 1.354 (6) |
O9—C22 | 1.260 (6) | C22—C22ii | 1.534 (9) |
O9—Cd1ii | 2.347 (3) | C23—C23i | 1.549 (9) |
O10—C22 | 1.238 (5) | C24—N3 | 1.364 (7) |
C1—C2 | 1.383 (6) | C24—C29 | 1.384 (7) |
C1—C6 | 1.391 (6) | C24—C25 | 1.397 (8) |
C1—C7 | 1.472 (7) | C25—C26 | 1.366 (8) |
C2—C3 | 1.388 (7) | C25—H25A | 0.9300 |
C2—H2A | 0.9300 | C26—C27 | 1.403 (10) |
C3—C4 | 1.386 (7) | C26—H26A | 0.9300 |
C3—C8 | 1.495 (6) | C27—C28 | 1.350 (10) |
C4—C5 | 1.403 (7) | C27—H27A | 0.9300 |
C4—H4A | 0.9300 | C28—C29 | 1.400 (8) |
C5—C6 | 1.373 (7) | C28—H28A | 0.9300 |
C5—C9 | 1.485 (7) | C29—N5 | 1.359 (8) |
C6—H6A | 0.9300 | N3—N4 | 1.300 (7) |
C10—N1 | 1.329 (7) | N4—N5 | 1.338 (6) |
C10—C11 | 1.388 (8) | N5—H5A | 0.8600 |
C10—H10A | 0.9300 | O1W—H4 | 0.8500 |
C11—C12 | 1.356 (9) | O1W—H5 | 0.8500 |
C11—H11A | 0.9300 | ||
O8i—Cd1—N2 | 161.05 (12) | C13—C12—H12A | 120.2 |
O8i—Cd1—O9ii | 87.86 (12) | C12—C13—C21 | 117.5 (5) |
N2—Cd1—O9ii | 103.10 (14) | C12—C13—C14 | 123.6 (5) |
O8i—Cd1—N1 | 112.36 (14) | C21—C13—C14 | 118.9 (6) |
N2—Cd1—N1 | 71.21 (15) | C15—C14—C13 | 122.0 (5) |
O9ii—Cd1—N1 | 133.31 (12) | C15—C14—H14A | 119.0 |
O8i—Cd1—O7 | 71.17 (11) | C13—C14—H14A | 119.0 |
N2—Cd1—O7 | 91.26 (13) | C14—C15—C16 | 120.0 (5) |
O9ii—Cd1—O7 | 142.92 (12) | C14—C15—H15A | 120.0 |
N1—Cd1—O7 | 83.60 (12) | C16—C15—H15A | 120.0 |
O8i—Cd1—O10 | 86.14 (13) | C20—C16—C17 | 118.6 (5) |
N2—Cd1—O10 | 83.79 (14) | C20—C16—C15 | 120.2 (6) |
O9ii—Cd1—O10 | 68.08 (11) | C17—C16—C15 | 121.2 (5) |
N1—Cd1—O10 | 149.68 (13) | C18—C17—C16 | 119.1 (5) |
O7—Cd1—O10 | 79.99 (12) | C18—C17—H17A | 120.5 |
O8i—Cd1—O5 | 84.27 (13) | C16—C17—H17A | 120.5 |
N2—Cd1—O5 | 113.84 (14) | C17—C18—C19 | 119.3 (6) |
O9ii—Cd1—O5 | 70.34 (12) | C17—C18—H18A | 120.3 |
N1—Cd1—O5 | 70.51 (13) | C19—C18—H18A | 120.3 |
O7—Cd1—O5 | 134.10 (13) | N2—C19—C18 | 122.9 (5) |
O10—Cd1—O5 | 137.58 (12) | N2—C19—H19A | 118.5 |
C8—O2—H1 | 110.0 | C18—C19—H19A | 118.5 |
C9—O4—H2 | 96.1 | N2—C20—C16 | 122.1 (5) |
C7—O5—Cd1 | 141.0 (3) | N2—C20—C21 | 118.1 (4) |
C7—O6—H3 | 109.0 | C16—C20—C21 | 119.8 (5) |
C23—O7—Cd1 | 115.5 (3) | N1—C21—C13 | 122.5 (5) |
C23—O8—Cd1i | 118.6 (3) | N1—C21—C20 | 118.3 (4) |
C22—O9—Cd1ii | 120.8 (3) | C13—C21—C20 | 119.2 (5) |
C22—O10—Cd1 | 116.4 (3) | O10—C22—O9 | 125.3 (4) |
C2—C1—C6 | 119.7 (4) | O10—C22—C22ii | 119.1 (5) |
C2—C1—C7 | 123.3 (4) | O9—C22—C22ii | 115.6 (5) |
C6—C1—C7 | 117.0 (4) | O7—C23—O8 | 125.2 (4) |
C1—C2—C3 | 119.7 (4) | O7—C23—C23i | 119.2 (5) |
C1—C2—H2A | 120.2 | O8—C23—C23i | 115.6 (5) |
C3—C2—H2A | 120.2 | N3—C24—C29 | 108.8 (5) |
C4—C3—C2 | 120.7 (4) | N3—C24—C25 | 131.1 (5) |
C4—C3—C8 | 121.0 (5) | C29—C24—C25 | 120.1 (5) |
C2—C3—C8 | 118.3 (4) | C26—C25—C24 | 117.1 (6) |
C3—C4—C5 | 119.5 (5) | C26—C25—H25A | 121.4 |
C3—C4—H4A | 120.2 | C24—C25—H25A | 121.4 |
C5—C4—H4A | 120.2 | C25—C26—C27 | 121.4 (7) |
C6—C5—C4 | 119.3 (5) | C25—C26—H26A | 119.3 |
C6—C5—C9 | 118.1 (4) | C27—C26—H26A | 119.3 |
C4—C5—C9 | 122.6 (5) | C28—C27—C26 | 122.9 (6) |
C5—C6—C1 | 121.2 (4) | C28—C27—H27A | 118.5 |
C5—C6—H6A | 119.4 | C26—C27—H27A | 118.5 |
C1—C6—H6A | 119.4 | C27—C28—C29 | 115.3 (6) |
O5—C7—O6 | 121.9 (5) | C27—C28—H28A | 122.3 |
O5—C7—C1 | 123.0 (5) | C29—C28—H28A | 122.3 |
O6—C7—C1 | 115.1 (4) | N5—C29—C24 | 103.5 (5) |
O1—C8—O2 | 123.7 (5) | N5—C29—C28 | 133.4 (6) |
O1—C8—C3 | 122.3 (5) | C24—C29—C28 | 123.1 (6) |
O2—C8—C3 | 114.0 (4) | C10—N1—C21 | 117.6 (4) |
O3—C9—O4 | 123.4 (5) | C10—N1—Cd1 | 126.4 (4) |
O3—C9—C5 | 121.7 (5) | C21—N1—Cd1 | 115.9 (3) |
O4—C9—C5 | 114.9 (4) | C19—N2—C20 | 118.0 (5) |
N1—C10—C11 | 123.5 (6) | C19—N2—Cd1 | 125.6 (4) |
N1—C10—H10A | 118.3 | C20—N2—Cd1 | 116.4 (4) |
C11—C10—H10A | 118.3 | N4—N3—C24 | 108.4 (5) |
C12—C11—C10 | 119.2 (6) | N3—N4—N5 | 108.4 (5) |
C12—C11—H11A | 120.4 | N4—N5—C29 | 110.9 (5) |
C10—C11—H11A | 120.4 | N4—N5—H5A | 124.5 |
C11—C12—C13 | 119.7 (5) | C29—N5—H5A | 124.5 |
C11—C12—H12A | 120.2 | H4—O1W—H5 | 107.7 |
Symmetry codes: (i) −x+1, −y, −z+1; (ii) −x, −y, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H4···O1iii | 0.85 | 1.99 | 2.824 (5) | 165 |
N5—H5A···O1Wiv | 0.86 | 1.93 | 2.775 (6) | 166 |
O6—H3···O9ii | 0.85 | 1.83 | 2.659 (5) | 163 |
O2—H1···O8v | 0.85 | 1.79 | 2.636 (5) | 172 |
O4—H2···N3 | 0.85 | 1.94 | 2.711 (6) | 150 |
O1W—H5···O10 | 0.85 | 2.12 | 2.942 (5) | 164 |
Symmetry codes: (ii) −x, −y, −z+1; (iii) x, y, z+1; (iv) x+1, y+1, z−1; (v) x, y, z−1. |
Experimental details
Crystal data | |
Chemical formula | [Cd(C2O4)(C9H6O6)(C12H8N2)]·C6H5N3·H2O |
Mr | 727.91 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 298 |
a, b, c (Å) | 9.4531 (19), 10.869 (2), 14.100 (3) |
α, β, γ (°) | 87.86 (3), 73.28 (3), 84.63 (3) |
V (Å3) | 1381.3 (5) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.87 |
Crystal size (mm) | 0.26 × 0.25 × 0.16 |
Data collection | |
Diffractometer | Rigaku R-AXIS RAPID IP diffractometer |
Absorption correction | Multi-scan (ABSCOR; Higashi, 1995) |
Tmin, Tmax | 0.806, 0.874 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 13575, 6247, 4186 |
Rint | 0.073 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.056, 0.119, 1.03 |
No. of reflections | 6247 |
No. of parameters | 415 |
No. of restraints | 1 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.77, −1.12 |
Computer programs: PROCESS-AUTO (Rigaku, 1998), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), ORTEPIII (Burnett & Johnson, 1996), ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 2005), SHELXTL (Bruker, 2001).
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H4···O1i | 0.85 | 1.99 | 2.824 (5) | 164.9 |
N5—H5A···O1Wii | 0.86 | 1.93 | 2.775 (6) | 165.6 |
O6—H3···O9iii | 0.85 | 1.83 | 2.659 (5) | 163.1 |
O2—H1···O8iv | 0.85 | 1.79 | 2.636 (5) | 171.6 |
O4—H2···N3 | 0.85 | 1.94 | 2.711 (6) | 150.0 |
O1W—H5···O10 | 0.85 | 2.12 | 2.942 (5) | 163.5 |
Symmetry codes: (i) x, y, z+1; (ii) x+1, y+1, z−1; (iii) −x, −y, −z+1; (iv) x, y, z−1. |
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Rational design and synthesis of metal-organic polymers is of current interest in the field of supramolecular chemistry and crystal engineering. Benzene-1,3,5-tricarboxylic acid (H3BTC), as a popular organic ligand, has been investigated in the construction of metal-organic frameworks. As a multi-carboxylate ligand, benzene-1,3,5-tricarboxylic acid exhibits versatile binding modes in the construction of polymeric complexes. It can act as H2BTC- (Ying & Mao, 2004), HBTC2-(Shi et al., 2004) and BTC3- (Almeida Paz & Kilnowski, 2004) anions and serve as µ2 (Cheng et al., 2004), µ3 (Zheng et al., 2004), µ4 (Shi et al., 2003), µ5 (Wang et al., 2003) and µ6 (Serre et al., 2004) linkers. So far, some structures of metal-organic polymers containing benzene-1,3,5-tricarboxylic acid and 1,10-phenanthroline have been reported, such as catena-[bis(µ3-benzenecarboxylic acid -3,5-dicarboxylato)bis(1,10-phenanthroline)dicadmium(II) (µ2-benzenenecarboxylic acid -3,5-dicarboxylato)bis(1,10-phenanthroline)cadmium(II)] (Shi et al., 2004), catena-[(µ3-1,3,5-benzenetricarboxylato) -(1,10-phenanthroline)indium] (Gomez-Lor et al., 2005), catena-[(µ2-1,3-dicarboxybenzene-5-carboxylato)diaqua (1,10-phenanthroline)manganese(II)1,3-dicarboxybenzene-5-carboxylate monohydrate] (Majumder et al., 2005), catena-[(µ2-benaene-1,3-dicarboxylato-5-carboxylic acid)-aqua- (1,10-phenanthroline)-cobalt(II)] (Plater et al., 2001) and bis[diaqua-bis(1,10-phenathroline)manganese(II)]hexaaquacopper(II) bis(1,3,5-benzenetricarboxylate)docosahydrate clathrate (Qiu et al., 2005). We report here the structure of [Cd(C9H6O6)(C12H8N2)(C2O4)]·(C6H5N3)·H2O, (I), which contains four different organic ligands.
As shown in Fig. 1, the asymmetric unit contains one Cd atom, one H3BTC ligand, one 1,10-phenanthroline ligand, two half oxalate ligands, one uncoordinated benzotriazole molecule and one solvent water molecule. The CdII ion is coordinated by five O atoms of one H3BTC ligand and two oxalate ligands, and two N atoms from the 1,10-phenanthroline ligand, showing a distorted pentagonal–bipyramidal geometry. The two half oxalate ligands in the asymmetric unit possess inversion symmetry. The Cd—O bond distances range from 2.287 (3) to 2.525 (4) Å, and the Cd—N bond distances are 2.334 (4) and 2.351 (4) Å (Fig. 1). Adjacent Cd atoms are linked by oxalate ligands, forming one-dimensional chains running along the crystallographic a axis (Fig. 2). The dihedral angles between the oxalate and 1,10-phenanthroline ligands are 72.348 (s.u. value?) and 82.871 (s.u.?)°. The chains of (I) are linked by O—H···O hydrogen bonds involving the hydroxy groups of H3BTC ligands and carboxyl groups of oxalate ligands (O2—H1···O8iv, O6—H3···O9iii; all symmetry codes as in Table 1), resulting in two-dimensional layers (Fig. 3). Although the benzotriazole ligands are not coordinated to the Cd atom, they take part in the construction of the three-dimensional hydrogen-bond network. These sheets are further linked into a three-dimensional supramolecular network via O —H···N, N—H···O, and O—H···O hydrogen bonds (O4—H2···N3, N5—H5A···O1Wii, O1W—H4···O1i, O1W—H5···O10) (Fig. 3), and details are given in Table 1. Meanwhile, the three-dimensional network of the title compound is stabilized by strong π–π stacking interactions between the 1,10-phenanthroline ligands and H3BTC ligands. As shown in Fig. 3, the face-to-face distance between adjacent 1,10-phenanthroline ligands is 3.324 (3) Å, and that between the H3BTC ligands and the benzotriazole system is 3.414 (3) Å. These strong π–π stacking and hydrogen-bonding interactions play important roles in forming the resulting three-dimensional supramolecular network.