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The structure of the title compound, C
19H
20N
2O
6S, has been determined as part of an ongoing investigation into the preparation of bis-
N-alkylated amino acids for subsequent alkene cross-metathesis reactions to generate dynamic combinatorial libraries. The overall molecular conformation is stabilized by well defined intramolecular C—H
O interactions.
Supporting information
CCDC reference: 217460
Key indicators
- Single-crystal X-ray study
- T = 295 K
- Mean (C-C) = 0.006 Å
- R factor = 0.040
- wR factor = 0.123
- Data-to-parameter ratio = 11.0
checkCIF results
No syntax errors found
ADDSYM reports no extra symmetry
Alert Level C:
PLAT_368 Alert C Short C(sp2)-C(sp2) Bond C11 - C12 = 1.16 Ang.
General Notes
REFLT_03
From the CIF: _diffrn_reflns_theta_max 27.50
From the CIF: _reflns_number_total 2796
Count of symmetry unique reflns 2637
Completeness (_total/calc) 106.03%
TEST3: Check Friedels for noncentro structure
Estimate of Friedel pairs measured 159
Fraction of Friedel pairs measured 0.060
Are heavy atom types Z>Si present yes
WARNING: Large fraction of Friedel related reflns may
be needed to determine absolute structure
0 Alert Level A = Potentially serious problem
0 Alert Level B = Potential problem
1 Alert Level C = Please check
Compound (I) was synthesized following published procedures (Reichwein et al. 2000). Allyl bromide (2.85 ml, 32.93 mmol) was added to a solution of 2-nitrobenzenesulfonyl-L-phenylalanine methyl ester (6.485 g, 17.8 mmol) and K2CO3 (4.98 g, 36.05 mmol) in anhydrous DMF (50 ml) and the mixture stirred at room temperature for 16 h. Water (40 ml) was added and the mixture extracted from ether (3 × 30 ml), the combined extracts washed with brine (3 × 40 ml) and dried over MgSO4 before solvent was removed under reduced pressure. The resultant yellow oil afforded colourless crystals on standing. Yield: 6.51 g (90.4%); m.p. 326–327 K; 1H NMR (CDCl3, 200 MHz, p.p.m.): 7.54–7.85 [m, 4H, CHarom(oNBS)], 7.18–7.28 (m, 5H, CHaromPhe), 5.70–5.85(m, 1H, HC═), 5.07–5.28 (m, 2H, ═CH2), 4.91 (t, 1H, J = 7.4 Hz,αCH), 3.85–4.20 (m, 2H, βCH2), 3.55 (s, 3H, OCH3), 3.36 (dd, 1H, 2J = 14 Hz, 3J = 7.4 Hz, NCH of NCH2), 3.04 (dd 1H,2J = 14 Hz, 3J = 7.4 Hz, NCH of NCH2).
H atoms were constrained as riding atoms, with C—H distances set to 0.95 Å.
Data collection: MSC/AFC7 Diffractometer Control Software for Windows
(Molecular Structure Corporation, 1999); cell refinement: MSC/AFC7 Diffractometer Control Software for Windows; data reduction: TEXSAN for Windows (Molecular Structure Corporation, 1997-2001); program(s) used to solve structure: TEXSAN for Windows; program(s) used to refine structure: TEXSAN for Windows and SHELXL97 (Sheldrick, 1997); molecular graphics: PLATON (Spek, 2001) and ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: TEXSAN for Windows and PLATON.
N-Allyl-
N-(2-nitrobenzenesulfonyl)-
L-phenylalanine methyl ester
top
Crystal data top
C19H20N2O6S | F(000) = 848 |
Mr = 404.44 | Dx = 1.344 Mg m−3 |
Orthorhombic, P212121 | Mo Kα radiation, λ = 0.7107 Å |
Hall symbol: P 2ac 2ab | Cell parameters from 25 reflections |
a = 9.2756 (15) Å | θ = 12.6–17.0° |
b = 27.430 (4) Å | µ = 0.20 mm−1 |
c = 7.8548 (12) Å | T = 295 K |
V = 1998.5 (5) Å3 | Prismatic, colorless |
Z = 4 | 0.50 × 0.30 × 0.20 mm |
Data collection top
Rigaku AFC-7R diffractometer | Rint = 0.025 |
Radiation source: Rigaku rotating anode | θmax = 27.5°, θmin = 2.7° |
Graphite monochromator | h = −5→12 |
ω scans | k = 0→35 |
3271 measured reflections | l = −4→10 |
2796 independent reflections | 3 standard reflections every 150 reflections |
2049 reflections with I > 2σ(I) | intensity decay: 0.4% |
Refinement top
Refinement on F2 | Hydrogen site location: inferred from neighbouring sites |
Least-squares matrix: full | H-atom parameters constrained |
R[F2 > 2σ(F2)] = 0.040 | w = 1/[σ2(Fo2) + (0.0695P)2 + 0.3341P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.123 | (Δ/σ)max = 0.035 |
S = 1.03 | Δρmax = 0.56 e Å−3 |
2796 reflections | Δρmin = −0.29 e Å−3 |
254 parameters | Extinction correction: SHELXL97, FC*=KFC[1+0.001XFC2Λ3/SIN(2Θ)]-1/4 |
0 restraints | Extinction coefficient: 0.0066 (16) |
Primary atom site location: structure-invariant direct methods | Absolute structure: Flack (1983), 0000 Friedel pairs |
Secondary atom site location: difference Fourier map | Absolute structure parameter: 0.15 (14) |
Crystal data top
C19H20N2O6S | V = 1998.5 (5) Å3 |
Mr = 404.44 | Z = 4 |
Orthorhombic, P212121 | Mo Kα radiation |
a = 9.2756 (15) Å | µ = 0.20 mm−1 |
b = 27.430 (4) Å | T = 295 K |
c = 7.8548 (12) Å | 0.50 × 0.30 × 0.20 mm |
Data collection top
Rigaku AFC-7R diffractometer | Rint = 0.025 |
3271 measured reflections | 3 standard reflections every 150 reflections |
2796 independent reflections | intensity decay: 0.4% |
2049 reflections with I > 2σ(I) | |
Refinement top
R[F2 > 2σ(F2)] = 0.040 | H-atom parameters constrained |
wR(F2) = 0.123 | Δρmax = 0.56 e Å−3 |
S = 1.03 | Δρmin = −0.29 e Å−3 |
2796 reflections | Absolute structure: Flack (1983), 0000 Friedel pairs |
254 parameters | Absolute structure parameter: 0.15 (14) |
0 restraints | |
Special details top
Experimental. The scan width was (1.26 + 0.30tanθ)° with an ω scan speed of 16° per minute (up to 4 scans to achieve I/σ(I) > 10). Stationary background counts were recorded at each end of the scan, and the scan time:background time ratio was 2:1. |
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All e.s.d.'s are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
S1 | 0.01663 (8) | 0.84200 (3) | 0.24411 (12) | 0.0509 (3) | |
O1 | 0.1434 (6) | 0.77727 (15) | −0.1735 (5) | 0.134 (2) | |
O2 | 0.2827 (4) | 0.82963 (11) | −0.0546 (4) | 0.0937 (12) | |
O3 | −0.0051 (3) | 0.85613 (8) | 0.0714 (3) | 0.0629 (8) | |
O4 | −0.1049 (2) | 0.83638 (9) | 0.3537 (4) | 0.0699 (9) | |
O5 | 0.4009 (3) | 0.84493 (10) | 0.3332 (4) | 0.0739 (10) | |
O6 | 0.4779 (3) | 0.90384 (10) | 0.1574 (4) | 0.0741 (10) | |
N1 | 0.2067 (4) | 0.79348 (13) | −0.0523 (5) | 0.0760 (14) | |
N2 | 0.1220 (3) | 0.88161 (10) | 0.3329 (4) | 0.0497 (8) | |
C1 | 0.1051 (3) | 0.78451 (11) | 0.2432 (5) | 0.0497 (9) | |
C2 | 0.1883 (4) | 0.76690 (12) | 0.1099 (5) | 0.0557 (11) | |
C3 | 0.2575 (5) | 0.72288 (14) | 0.1207 (7) | 0.0763 (14) | |
C4 | 0.2438 (5) | 0.69531 (14) | 0.2671 (8) | 0.0880 (18) | |
C5 | 0.1564 (6) | 0.71074 (16) | 0.3955 (7) | 0.0840 (17) | |
C6 | 0.0871 (4) | 0.75482 (13) | 0.3848 (5) | 0.0643 (12) | |
C7 | 0.2334 (3) | 0.90632 (11) | 0.2334 (5) | 0.0494 (9) | |
C8 | 0.3795 (3) | 0.88076 (13) | 0.2506 (5) | 0.0563 (11) | |
C9 | 0.6213 (4) | 0.8825 (2) | 0.1555 (8) | 0.102 (2) | |
C10 | 0.1396 (4) | 0.87808 (16) | 0.5190 (5) | 0.0697 (14) | |
C11 | 0.0483 (6) | 0.9098 (2) | 0.6238 (8) | 0.106 (2) | |
C12 | −0.0369 (6) | 0.9393 (2) | 0.5925 (11) | 0.129 (3) | |
C13 | 0.2447 (4) | 0.96032 (12) | 0.2792 (5) | 0.0607 (13) | |
C14 | 0.1219 (3) | 0.99312 (11) | 0.2214 (5) | 0.0524 (10) | |
C15 | 0.1210 (4) | 1.04051 (13) | 0.2820 (5) | 0.0636 (13) | |
C16 | 0.0190 (5) | 1.07375 (12) | 0.2293 (6) | 0.0729 (13) | |
C17 | −0.0857 (5) | 1.06013 (14) | 0.1133 (7) | 0.0763 (14) | |
C18 | −0.0876 (4) | 1.01278 (14) | 0.0552 (6) | 0.0710 (14) | |
C19 | 0.0167 (4) | 0.97958 (12) | 0.1064 (5) | 0.0616 (11) | |
H3 | 0.31290 | 0.71120 | 0.02780 | 0.0930* | |
H4 | 0.29590 | 0.66570 | 0.27800 | 0.1110* | |
H5 | 0.14460 | 0.69110 | 0.49370 | 0.1030* | |
H6 | 0.02540 | 0.76490 | 0.47490 | 0.0780* | |
H7 | 0.20660 | 0.90420 | 0.11680 | 0.0610* | |
H11 | 0.06260 | 0.90530 | 0.74310 | 0.1280* | |
H15 | 0.19200 | 1.05050 | 0.36100 | 0.0790* | |
H16 | 0.02180 | 1.10620 | 0.27120 | 0.0900* | |
H17 | −0.15600 | 1.08280 | 0.07640 | 0.0930* | |
H18 | −0.16000 | 1.00260 | −0.02310 | 0.0870* | |
H19 | 0.01590 | 0.94740 | 0.06240 | 0.0750* | |
H91 | 0.61370 | 0.84830 | 0.13780 | 0.1250* | |
H92 | 0.66830 | 0.88890 | 0.25940 | 0.1250* | |
H93 | 0.67510 | 0.89650 | 0.06380 | 0.1250* | |
H101 | 0.23750 | 0.88600 | 0.54500 | 0.0840* | |
H102 | 0.12090 | 0.84550 | 0.55190 | 0.0840* | |
H121 | −0.05940 | 0.94630 | 0.47670 | 0.1600* | |
H122 | −0.08570 | 0.95590 | 0.68120 | 0.1600* | |
H131 | 0.25160 | 0.96280 | 0.39870 | 0.0740* | |
H132 | 0.33080 | 0.97270 | 0.22810 | 0.0740* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
S1 | 0.0425 (4) | 0.0501 (4) | 0.0600 (5) | 0.0024 (3) | −0.0080 (4) | 0.0025 (4) |
O1 | 0.222 (5) | 0.118 (3) | 0.062 (2) | −0.044 (3) | −0.016 (3) | −0.014 (2) |
O2 | 0.113 (2) | 0.086 (2) | 0.082 (2) | −0.0277 (19) | 0.021 (2) | 0.0041 (17) |
O3 | 0.0675 (15) | 0.0527 (12) | 0.0686 (15) | −0.0018 (12) | −0.0266 (15) | 0.0045 (11) |
O4 | 0.0415 (12) | 0.0713 (16) | 0.097 (2) | 0.0031 (12) | 0.0092 (14) | 0.0022 (16) |
O5 | 0.0606 (14) | 0.0803 (17) | 0.0807 (19) | 0.0236 (14) | −0.0014 (14) | 0.0164 (16) |
O6 | 0.0441 (12) | 0.0945 (19) | 0.0837 (18) | 0.0106 (14) | 0.0081 (15) | 0.0152 (16) |
N1 | 0.102 (3) | 0.069 (2) | 0.057 (2) | −0.004 (2) | 0.008 (2) | −0.0095 (18) |
N2 | 0.0432 (14) | 0.0523 (14) | 0.0537 (16) | 0.0001 (12) | −0.0019 (14) | −0.0036 (13) |
C1 | 0.0442 (15) | 0.0498 (15) | 0.0552 (18) | 0.0034 (13) | −0.0077 (19) | 0.0044 (18) |
C2 | 0.059 (2) | 0.0510 (18) | 0.057 (2) | −0.0027 (16) | −0.0014 (19) | −0.0029 (16) |
C3 | 0.070 (2) | 0.058 (2) | 0.101 (3) | 0.008 (2) | 0.003 (3) | −0.015 (3) |
C4 | 0.088 (3) | 0.053 (2) | 0.123 (4) | 0.017 (2) | −0.013 (4) | 0.016 (3) |
C5 | 0.094 (3) | 0.067 (3) | 0.091 (3) | 0.004 (2) | −0.013 (3) | 0.028 (2) |
C6 | 0.064 (2) | 0.066 (2) | 0.063 (2) | 0.0052 (19) | 0.001 (2) | 0.013 (2) |
C7 | 0.0395 (14) | 0.0507 (15) | 0.0579 (19) | 0.0037 (12) | −0.0053 (17) | 0.0024 (18) |
C8 | 0.0477 (17) | 0.0659 (19) | 0.0552 (19) | 0.0088 (15) | −0.003 (2) | −0.006 (2) |
C9 | 0.046 (2) | 0.152 (5) | 0.109 (4) | 0.023 (3) | 0.009 (3) | 0.007 (4) |
C10 | 0.064 (2) | 0.091 (3) | 0.054 (2) | −0.007 (2) | 0.001 (2) | −0.010 (2) |
C11 | 0.077 (3) | 0.136 (5) | 0.105 (4) | −0.022 (3) | 0.029 (3) | −0.053 (4) |
C12 | 0.068 (3) | 0.131 (5) | 0.189 (7) | −0.001 (3) | 0.023 (4) | −0.057 (5) |
C13 | 0.0480 (16) | 0.0551 (17) | 0.079 (3) | −0.0026 (15) | −0.0101 (19) | −0.002 (2) |
C14 | 0.0490 (16) | 0.0473 (16) | 0.061 (2) | −0.0027 (14) | 0.0091 (18) | 0.0008 (16) |
C15 | 0.065 (2) | 0.0548 (17) | 0.071 (3) | −0.0050 (17) | 0.001 (2) | −0.0098 (19) |
C16 | 0.082 (2) | 0.0497 (17) | 0.087 (3) | 0.0072 (19) | 0.013 (3) | −0.008 (2) |
C17 | 0.072 (2) | 0.056 (2) | 0.101 (3) | 0.016 (2) | 0.008 (3) | 0.007 (2) |
C18 | 0.064 (2) | 0.065 (2) | 0.084 (3) | 0.007 (2) | −0.011 (2) | 0.001 (2) |
C19 | 0.057 (2) | 0.0518 (18) | 0.076 (2) | 0.0070 (16) | −0.007 (2) | −0.0026 (18) |
Geometric parameters (Å, º) top
S1—O3 | 1.425 (3) | C15—C16 | 1.378 (6) |
S1—O4 | 1.427 (3) | C16—C17 | 1.383 (7) |
S1—N2 | 1.619 (3) | C17—C18 | 1.377 (6) |
S1—C1 | 1.778 (3) | C18—C19 | 1.388 (5) |
O1—N1 | 1.204 (6) | C3—H3 | 0.9483 |
O2—N1 | 1.217 (5) | C4—H4 | 0.9490 |
O5—C8 | 1.194 (5) | C5—H5 | 0.9472 |
O6—C8 | 1.330 (4) | C6—H6 | 0.9512 |
O6—C9 | 1.453 (5) | C7—H7 | 0.9508 |
N1—C2 | 1.478 (5) | C9—H91 | 0.9510 |
N2—C7 | 1.462 (4) | C9—H92 | 0.9418 |
N2—C10 | 1.474 (5) | C9—H93 | 0.9567 |
C1—C2 | 1.388 (5) | C10—H101 | 0.9558 |
C1—C6 | 1.389 (5) | C10—H102 | 0.9463 |
C2—C3 | 1.370 (5) | C11—H11 | 0.9544 |
C3—C4 | 1.382 (8) | C12—H121 | 0.9528 |
C4—C5 | 1.361 (8) | C12—H122 | 0.9474 |
C5—C6 | 1.372 (6) | C13—H131 | 0.9433 |
C7—C8 | 1.532 (4) | C13—H132 | 0.9562 |
C7—C13 | 1.528 (5) | C15—H15 | 0.9454 |
C10—C11 | 1.467 (7) | C16—H16 | 0.9494 |
C11—C12 | 1.157 (8) | C17—H17 | 0.9465 |
C13—C14 | 1.521 (5) | C18—H18 | 0.9525 |
C14—C15 | 1.384 (5) | C19—H19 | 0.9480 |
C14—C19 | 1.381 (5) | | |
| | | |
S1···O2 | 3.422 (4) | C15···C11iii | 3.579 (7) |
O1···O3 | 3.206 (5) | C16···O6viii | 3.418 (6) |
O2···O3 | 2.938 (5) | C17···C12x | 3.504 (7) |
O2···O6 | 3.193 (4) | C19···O3 | 3.403 (4) |
O2···S1 | 3.422 (4) | C19···N2 | 3.368 (5) |
O2···C8 | 2.919 (5) | C1···H102 | 2.9495 |
O2···C7 | 3.123 (5) | C6···H102 | 2.8298 |
O3···O2 | 2.938 (5) | C7···H19 | 2.6728 |
O3···O1 | 3.206 (5) | C8···H101 | 2.6651 |
O3···N1 | 2.785 (4) | C10···H131 | 2.7152 |
O3···C19 | 3.403 (4) | C11···H131 | 2.9658 |
O4···C9i | 3.236 (5) | C12···H17ix | 2.9151 |
O4···C4ii | 3.405 (7) | C13···H101 | 2.9188 |
O4···C11 | 3.252 (6) | C14···H131iii | 3.0436 |
O4···C5ii | 3.233 (6) | C14···H121 | 2.9153 |
O5···C10 | 2.972 (5) | C15···H101iii | 3.0417 |
O5···C1 | 3.282 (4) | C16···H101iii | 2.9010 |
O5···C2 | 3.398 (5) | C19···H7 | 2.7175 |
O5···N2 | 2.776 (4) | H3···O1 | 2.8734 |
O6···C16iii | 3.418 (6) | H3···O3xi | 2.6207 |
O6···O2 | 3.193 (4) | H5···O4vi | 2.7210 |
O1···H3 | 2.8734 | H5···O5ii | 2.8169 |
O1···H102iv | 2.8633 | H6···O4 | 2.4923 |
O2···H16iii | 2.8738 | H6···H102 | 2.4573 |
O2···H7 | 2.5485 | H7···O2 | 2.5485 |
O3···H7 | 2.3920 | H7···O3 | 2.3920 |
O3···H19 | 2.5121 | H7···C19 | 2.7175 |
O3···H3v | 2.6207 | H7···H19 | 2.1715 |
O4···H5ii | 2.7210 | H7···H15iii | 2.5428 |
O4···H102 | 2.6216 | H15···H131 | 2.4860 |
O4···H92i | 2.6551 | H15···H7viii | 2.5428 |
O4···H6 | 2.4923 | H16···O2viii | 2.8738 |
O5···H101 | 2.5167 | H17···C12x | 2.9151 |
O5···H91 | 2.5021 | H19···O3 | 2.5121 |
O5···H92 | 2.8183 | H19···C7 | 2.6728 |
O5···H5vi | 2.8169 | H19···H7 | 2.1715 |
O6···H132 | 2.3954 | H91···O5 | 2.5021 |
N1···O3 | 2.785 (4) | H92···O4vii | 2.6551 |
N2···O5 | 2.776 (4) | H92···O5 | 2.8183 |
N2···C19 | 3.368 (5) | H101···O5 | 2.5167 |
N2···H121 | 2.6936 | H101···C8 | 2.6651 |
C1···O5 | 3.282 (4) | H101···C13 | 2.9188 |
C2···O5 | 3.398 (5) | H101···H131 | 2.4032 |
C4···O4vi | 3.405 (7) | H101···C15viii | 3.0417 |
C5···O4vi | 3.233 (6) | H101···C16viii | 2.9010 |
C6···C10 | 3.575 (6) | H102···O1xii | 2.8633 |
C7···O2 | 3.123 (5) | H102···O4 | 2.6216 |
C8···O2 | 2.919 (5) | H102···C1 | 2.9495 |
C9···O4vii | 3.236 (5) | H102···C6 | 2.8298 |
C10···C6 | 3.575 (6) | H102···H6 | 2.4573 |
C10···O5 | 2.972 (5) | H121···N2 | 2.6936 |
C11···C13 | 3.545 (7) | H121···C14 | 2.9153 |
C11···O4 | 3.252 (6) | H131···C10 | 2.7152 |
C11···C15viii | 3.579 (7) | H131···C11 | 2.9658 |
C12···C17ix | 3.504 (7) | H131···H15 | 2.4860 |
C12···C14 | 3.584 (9) | H131···H101 | 2.4032 |
C13···C11 | 3.545 (7) | H131···C14viii | 3.0436 |
C14···C12 | 3.584 (9) | H132···O6 | 2.3954 |
| | | |
O3—S1—O4 | 119.47 (16) | C4—C3—H3 | 120.34 |
O3—S1—N2 | 108.23 (15) | C3—C4—H4 | 119.77 |
O3—S1—C1 | 107.62 (17) | C5—C4—H4 | 120.16 |
O4—S1—N2 | 106.83 (16) | C4—C5—H5 | 119.69 |
O4—S1—C1 | 105.74 (15) | C6—C5—H5 | 119.80 |
N2—S1—C1 | 108.56 (15) | C1—C6—H6 | 119.85 |
C8—O6—C9 | 116.2 (3) | C5—C6—H6 | 119.50 |
O1—N1—O2 | 124.9 (4) | N2—C7—H7 | 107.56 |
O1—N1—C2 | 116.3 (4) | C8—C7—H7 | 106.75 |
O2—N1—C2 | 118.8 (4) | C13—C7—H7 | 107.70 |
S1—N2—C7 | 120.5 (2) | O6—C9—H91 | 109.33 |
S1—N2—C10 | 116.7 (2) | O6—C9—H92 | 109.86 |
C7—N2—C10 | 118.8 (3) | O6—C9—H93 | 108.87 |
S1—C1—C2 | 124.7 (3) | H91—C9—H92 | 110.18 |
S1—C1—C6 | 117.5 (3) | H91—C9—H93 | 108.94 |
C2—C1—C6 | 117.8 (3) | H92—C9—H93 | 109.64 |
N1—C2—C1 | 122.9 (3) | N2—C10—H101 | 107.59 |
N1—C2—C3 | 115.7 (4) | N2—C10—H102 | 108.21 |
C1—C2—C3 | 121.4 (4) | C11—C10—H101 | 107.08 |
C2—C3—C4 | 119.4 (4) | C11—C10—H102 | 107.52 |
C3—C4—C5 | 120.1 (4) | H101—C10—H102 | 109.30 |
C4—C5—C6 | 120.5 (5) | C10—C11—H11 | 113.20 |
C1—C6—C5 | 120.6 (4) | C12—C11—H11 | 113.19 |
N2—C7—C8 | 111.5 (3) | C11—C12—H121 | 119.55 |
N2—C7—C13 | 111.8 (3) | C11—C12—H122 | 120.40 |
C8—C7—C13 | 111.2 (3) | H121—C12—H122 | 120.04 |
O5—C8—O6 | 125.2 (3) | C7—C13—H131 | 107.99 |
O5—C8—C7 | 124.9 (3) | C7—C13—H132 | 107.62 |
O6—C8—C7 | 109.9 (3) | C14—C13—H131 | 107.77 |
N2—C10—C11 | 117.0 (4) | C14—C13—H132 | 106.87 |
C10—C11—C12 | 133.6 (7) | H131—C13—H132 | 109.60 |
C7—C13—C14 | 116.9 (3) | C14—C15—H15 | 119.58 |
C13—C14—C15 | 117.2 (3) | C16—C15—H15 | 118.93 |
C13—C14—C19 | 124.4 (3) | C15—C16—H16 | 119.84 |
C15—C14—C19 | 118.2 (3) | C17—C16—H16 | 120.06 |
C14—C15—C16 | 121.5 (3) | C16—C17—H17 | 120.53 |
C15—C16—C17 | 120.1 (3) | C18—C17—H17 | 120.63 |
C16—C17—C18 | 118.8 (4) | C17—C18—H18 | 119.98 |
C17—C18—C19 | 120.9 (4) | C19—C18—H18 | 119.09 |
C14—C19—C18 | 120.4 (3) | C14—C19—H19 | 119.64 |
C2—C3—H3 | 120.26 | C18—C19—H19 | 119.99 |
| | | |
O3—S1—N2—C7 | −32.1 (3) | C6—C1—C2—N1 | 175.4 (3) |
O3—S1—N2—C10 | 170.5 (2) | C6—C1—C2—C3 | −3.7 (5) |
O4—S1—N2—C7 | −161.9 (2) | C2—C1—C6—C5 | 3.6 (5) |
O4—S1—N2—C10 | 40.7 (3) | S1—C1—C6—C5 | −177.6 (3) |
C1—S1—N2—C7 | 84.5 (3) | N1—C2—C3—C4 | −178.9 (4) |
C1—S1—N2—C10 | −72.9 (3) | C1—C2—C3—C4 | 0.3 (6) |
O3—S1—C1—C2 | 23.9 (3) | C2—C3—C4—C5 | 3.3 (7) |
O3—S1—C1—C6 | −154.8 (3) | C3—C4—C5—C6 | −3.4 (8) |
O4—S1—C1—C2 | 152.6 (3) | C4—C5—C6—C1 | −0.2 (7) |
O4—S1—C1—C6 | −26.1 (3) | N2—C7—C8—O6 | 179.4 (3) |
N2—S1—C1—C2 | −93.1 (3) | N2—C7—C8—O5 | 0.6 (5) |
N2—S1—C1—C6 | 88.2 (3) | C13—C7—C8—O6 | −55.0 (4) |
C9—O6—C8—O5 | 1.2 (6) | N2—C7—C13—C14 | −71.4 (4) |
C9—O6—C8—C7 | −177.6 (4) | C8—C7—C13—C14 | 163.2 (3) |
O2—N1—C2—C3 | −107.6 (4) | C13—C7—C8—O5 | 126.2 (4) |
O1—N1—C2—C1 | −106.5 (5) | N2—C10—C11—C12 | −2.0 (9) |
O1—N1—C2—C3 | 72.7 (5) | C7—C13—C14—C15 | 171.3 (3) |
O2—N1—C2—C1 | 73.3 (5) | C7—C13—C14—C19 | −12.3 (5) |
S1—N2—C7—C8 | −95.7 (3) | C13—C14—C19—C18 | −177.0 (4) |
S1—N2—C7—C13 | 139.1 (3) | C15—C14—C19—C18 | −0.7 (6) |
C10—N2—C7—C8 | 61.3 (4) | C13—C14—C15—C16 | 176.2 (4) |
C7—N2—C10—C11 | 105.9 (4) | C19—C14—C15—C16 | −0.4 (6) |
S1—N2—C10—C11 | −96.3 (4) | C14—C15—C16—C17 | 0.0 (7) |
C10—N2—C7—C13 | −64.0 (4) | C15—C16—C17—C18 | 1.4 (7) |
S1—C1—C2—N1 | −3.2 (5) | C16—C17—C18—C19 | −2.5 (7) |
S1—C1—C2—C3 | 177.7 (3) | C17—C18—C19—C14 | 2.1 (6) |
Symmetry codes: (i) x−1, y, z; (ii) x−1/2, −y+3/2, −z+1; (iii) −x+1/2, −y+2, z−1/2; (iv) x, y, z−1; (v) x−1/2, −y+3/2, −z; (vi) x+1/2, −y+3/2, −z+1; (vii) x+1, y, z; (viii) −x+1/2, −y+2, z+1/2; (ix) −x−1/2, −y+2, z+1/2; (x) −x−1/2, −y+2, z−1/2; (xi) x+1/2, −y+3/2, −z; (xii) x, y, z+1. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
C6—H6···O4 | 0.95 | 2.49 | 2.870 (4) | 104 |
C7—H7···O2 | 0.95 | 2.55 | 3.123 (5) | 119 |
C7—H7···O3 | 0.95 | 2.39 | 2.900 (4) | 113 |
C19—H19···O3 | 0.95 | 2.51 | 3.403 (4) | 157 |
C10—H101···O5 | 0.96 | 2.52 | 2.972 (5) | 109 |
C13—H132···O6 | 0.96 | 2.40 | 2.827 (5) | 107 |
Experimental details
Crystal data |
Chemical formula | C19H20N2O6S |
Mr | 404.44 |
Crystal system, space group | Orthorhombic, P212121 |
Temperature (K) | 295 |
a, b, c (Å) | 9.2756 (15), 27.430 (4), 7.8548 (12) |
V (Å3) | 1998.5 (5) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.20 |
Crystal size (mm) | 0.50 × 0.30 × 0.20 |
|
Data collection |
Diffractometer | Rigaku AFC-7R diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 3271, 2796, 2049 |
Rint | 0.025 |
(sin θ/λ)max (Å−1) | 0.650 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.040, 0.123, 1.03 |
No. of reflections | 2796 |
No. of parameters | 254 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.56, −0.29 |
Absolute structure | Flack (1983), 0000 Friedel pairs |
Absolute structure parameter | 0.15 (14) |
Selected geometric parameters (Å, º) topS1—O3 | 1.425 (3) | O6—C9 | 1.453 (5) |
S1—O4 | 1.427 (3) | N1—C2 | 1.478 (5) |
S1—N2 | 1.619 (3) | N2—C7 | 1.462 (4) |
S1—C1 | 1.778 (3) | N2—C10 | 1.474 (5) |
O1—N1 | 1.204 (6) | C7—C13 | 1.528 (5) |
O2—N1 | 1.217 (5) | C10—C11 | 1.467 (7) |
O5—C8 | 1.194 (5) | C11—C12 | 1.157 (8) |
O6—C8 | 1.330 (4) | C13—C14 | 1.521 (5) |
| | | |
O3—S1—O4 | 119.47 (16) | S1—C1—C2 | 124.7 (3) |
O3—S1—N2 | 108.23 (15) | S1—C1—C6 | 117.5 (3) |
O3—S1—C1 | 107.62 (17) | C2—C1—C6 | 117.8 (3) |
O4—S1—N2 | 106.83 (16) | N1—C2—C1 | 122.9 (3) |
O4—S1—C1 | 105.74 (15) | N1—C2—C3 | 115.7 (4) |
N2—S1—C1 | 108.56 (15) | N2—C7—C8 | 111.5 (3) |
C8—O6—C9 | 116.2 (3) | N2—C7—C13 | 111.8 (3) |
O1—N1—O2 | 124.9 (4) | C8—C7—C13 | 111.2 (3) |
O1—N1—C2 | 116.3 (4) | O5—C8—O6 | 125.2 (3) |
O2—N1—C2 | 118.8 (4) | O5—C8—C7 | 124.9 (3) |
S1—N2—C7 | 120.5 (2) | O6—C8—C7 | 109.9 (3) |
S1—N2—C10 | 116.7 (2) | N2—C10—C11 | 117.0 (4) |
C7—N2—C10 | 118.8 (3) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
C6—H6···O4 | 0.95 | 2.49 | 2.870 (4) | 104 |
C7—H7···O2 | 0.95 | 2.55 | 3.123 (5) | 119 |
C7—H7···O3 | 0.95 | 2.39 | 2.900 (4) | 113 |
C19—H19···O3 | 0.95 | 2.51 | 3.403 (4) | 157 |
C10—H101···O5 | 0.96 | 2.52 | 2.972 (5) | 109 |
C13—H132···O6 | 0.96 | 2.40 | 2.827 (5) | 107 |
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The synthesis of a range of N-allyl substituted amino acids is desirable for the investigation of the biological applications of these molecules, as cross metathesis of the allyl moieties permits a combinatorial approach to the generation of libraries for biological screening. In this approach, both protection and activation of the amino acid nitrogen is required in order to facilitate subsequent high-yielding mono-allylation. The 2-nitrobenzenesulfonyl group (oNBS) is introduced prior to allylation and serves a dual role of protection and activation with the electron withdrawing effect of the oNBS group greatly increasing the acidity of the amino hydrogen.
The title compound, (I), crystallizes in the space group P212121 with one molecule in the asymmetric unit (Fig. 1). Molecules are separated by normal van der Waals distances. The bond lengths (Table 1) are in accord with conventional values (Allen et al., 1987). The conformational structure and shape of the molecules of (I) appear to be determined by a number of well defined intramolecular C—H···O interactions (Table 2) with, for example, the 2-nitrobenzenesulfonyl group 'spiralling' above the plane of the carboxylate group to bring nitro atom O2 into close proximity to the α carbon C7. It is of interest to note also in this structure, that the geometry about the amino N atom is almost trigonal planar with S1–N2–C10 = 116.7 (2)°, S1–N2–C7 = 120.5 (2)° and C7–N2–C10 = 118.8 (3)° (Σ = 355.9°).