Halogen bonding is a noncovalent interaction between the electrophilic region of a halogen (σ-hole) and an electron donor. We report a crystallographic and structural analysis of halogen-bonded compounds by applying a combined X-ray diffraction (XRD) and solid-state nuclear magnetic resonance (SSNMR) approach. Single-crystal XRD was first used to characterize the halogen-bonded cocrystals formed between two fluorinated halogen-bond donors (1,4-diiodotetrafluorobenzene and 1,3,5-trifluoro-2,4,6-triiodobenzene) and several nitrogen-containing heterocycles (acridine, 1,10-phenanthroline, 2,3,5,6-tetramethylpyrazine, and hexamethylenetetramine). New structures are reported for the following three cocrystals, all in the P21/c space group: acridine–1,3,5-trifluoro-2,4,6-triiodobenzene (1/1), C6F3I3·C13H9N, 1,10-phenanthroline–1,3,5-trifluoro-2,4,6-triiodobenzene (1/1), C6F3I3·C12H8N2, and 2,3,5,6-tetramethylpyrazine–1,3,5-trifluoro-2,4,6-triiodobenzene (1/1), C6F3I3·C8H12N2. 13C and 19F solid-state magic-angle spinning (MAS) NMR is shown to be a convenient method to characterize the structural features of the halogen-bond donor and acceptor, with chemical shifts attributable to cocrystal formation observed in the spectra of both nuclides. Cross polarization (CP) from 19F to 13C results in improved spectral sensitivity in characterizing the perfluorinated halogen-bond donor when compared to conventional 1H CP. Gauge-including projector-augmented wave density functional theory (GIPAW DFT) calculations of magnetic shielding constants, along with optimization of the XRD structures, provide a final set of structures in best agreement with the experimental 13C and 19F chemical shifts. Data for carbons bonded to iodine remain outliers due to well-known relativistic effects.
Supporting information
CCDC references: 1505895; 1505894; 1505893
For all compounds, data collection: APEX2 (Bruker, 2012); cell refinement: APEX2 (Bruker, 2012); data reduction: SAINT and XPREP (Bruker, 2009); program(s) used to solve structure: SHELXT (Sheldrick, 2015a); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015b) and WinGX (Farrugia, 2012); molecular graphics: Mercury (Macrae et al., 2008); software used to prepare material for publication: CIFTAB (Sheldrick, 1997).
(db146) 2,3,5,6-Tetramethylpyrazine–1,3,5-trifluoro-2,4,6-triiodobenzene (1/1)
top
Crystal data top
C6F3I3·C8H12N2 | Dx = 2.416 Mg m−3 |
Mr = 645.96 | Melting point: 398 K |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
a = 7.9818 (3) Å | Cell parameters from 9977 reflections |
b = 26.7046 (9) Å | θ = 2.6–27.8° |
c = 9.2220 (3) Å | µ = 5.31 mm−1 |
β = 115.398 (2)° | T = 200 K |
V = 1775.69 (11) Å3 | Rod, colorless |
Z = 4 | 0.52 × 0.26 × 0.11 mm |
F(000) = 1184 | |
Data collection top
Bruker APEXII CCD diffractometer | 3892 reflections with I > 2σ(I) |
Detector resolution: 8.33 pixels mm-1 | Rint = 0.042 |
φ and ω scans | θmax = 27.9°, θmin = 1.5° |
Absorption correction: multi-scan (SADABS; Bruker, 2003) | h = −10→10 |
Tmin = 0.443, Tmax = 0.746 | k = −34→35 |
29591 measured reflections | l = −11→12 |
4238 independent reflections | |
Refinement top
Refinement on F2 | 0 restraints |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.029 | H-atom parameters constrained |
wR(F2) = 0.067 | w = 1/[σ2(Fo2) + (0.0295P)2 + 1.8982P] where P = (Fo2 + 2Fc2)/3 |
S = 1.19 | (Δ/σ)max = 0.003 |
4238 reflections | Δρmax = 0.59 e Å−3 |
203 parameters | Δρmin = −1.64 e Å−3 |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Data were collected on a
Bruker AXS Kappa-single crystal diffractometer equipped with a sealed Mo tube
source (wavelength 0.71073 Å) APEX II CCD detector. Raw data collection and
processing were performed with the APEX II software package from BRUKER AXS
(Bruker, 2012). Semi-empirical absorption corrections based on equivalent
reflections were applied (Bruker, 2001). Systematic absences in the
diffraction dataset and unit cell parameters were consistent with monoclinic
P21/c (No. 14) for compounds A2, B2,
and C2.
The structures were solved by direct methods and refined with full-matrix
least-squares procedures based on F2, procedures using SHELXL2014
(Sheldrick, 2015) and WinGX (Farrugia 1999). All non-hydrogen atoms were
refined anisotropically. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
C1 | 0.6742 (5) | 0.45071 (13) | 0.3810 (4) | 0.0233 (7) | |
C2 | 0.5309 (5) | 0.45006 (13) | 0.2272 (4) | 0.0236 (7) | |
C3 | 0.4763 (5) | 0.40684 (13) | 0.1356 (4) | 0.0246 (7) | |
C4 | 0.5684 (5) | 0.36328 (13) | 0.2032 (4) | 0.0247 (7) | |
C5 | 0.7107 (5) | 0.36093 (13) | 0.3568 (4) | 0.0237 (7) | |
C6 | 0.7595 (5) | 0.40557 (13) | 0.4397 (4) | 0.0246 (7) | |
C7 | 1.1004 (6) | 0.56055 (15) | 0.9216 (5) | 0.0374 (9) | |
H7A | 1.0631 | 0.5365 | 0.8330 | 0.056* | |
H7B | 1.0620 | 0.5482 | 1.0028 | 0.056* | |
H7C | 1.2354 | 0.5646 | 0.9699 | 0.056* | |
C8 | 1.0090 (5) | 0.61026 (14) | 0.8586 (5) | 0.0269 (7) | |
C9 | 1.0623 (5) | 0.65410 (13) | 0.9482 (4) | 0.0256 (7) | |
C10 | 1.2160 (7) | 0.65493 (16) | 1.1139 (5) | 0.0400 (10) | |
H10A | 1.3342 | 0.6608 | 1.1081 | 0.060* | |
H10B | 1.2208 | 0.6227 | 1.1664 | 0.060* | |
H10C | 1.1939 | 0.6818 | 1.1759 | 0.060* | |
C11 | 0.6320 (6) | 0.65340 (16) | 0.4831 (5) | 0.0354 (9) | |
H11A | 0.6801 | 0.6659 | 0.4084 | 0.053* | |
H11B | 0.5297 | 0.6748 | 0.4776 | 0.053* | |
H11C | 0.5871 | 0.6190 | 0.4537 | 0.053* | |
C12 | 0.7844 (5) | 0.65404 (13) | 0.6512 (4) | 0.0238 (7) | |
C13 | 0.8365 (5) | 0.69778 (13) | 0.7418 (4) | 0.0262 (7) | |
C14 | 0.7447 (6) | 0.74686 (15) | 0.6771 (6) | 0.0416 (10) | |
H14A | 0.7944 | 0.7725 | 0.7610 | 0.062* | |
H14B | 0.6107 | 0.7437 | 0.6425 | 0.062* | |
H14C | 0.7688 | 0.7566 | 0.5853 | 0.062* | |
N1 | 0.8696 (4) | 0.61067 (11) | 0.7105 (4) | 0.0250 (6) | |
N2 | 0.9762 (5) | 0.69739 (11) | 0.8890 (4) | 0.0266 (6) | |
F1 | 0.8978 (3) | 0.40462 (9) | 0.5893 (3) | 0.0370 (5) | |
F2 | 0.4432 (3) | 0.49317 (8) | 0.1650 (3) | 0.0356 (5) | |
F3 | 0.5167 (4) | 0.32068 (8) | 0.1168 (3) | 0.0376 (6) | |
I1 | 0.75461 (3) | 0.51659 (2) | 0.51617 (3) | 0.02766 (7) | |
I2 | 0.26993 (4) | 0.40876 (2) | −0.09761 (3) | 0.03493 (8) | |
I3 | 0.84031 (4) | 0.29339 (2) | 0.45734 (3) | 0.03048 (8) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C1 | 0.0234 (17) | 0.0213 (16) | 0.0227 (17) | −0.0031 (13) | 0.0076 (14) | −0.0036 (13) |
C2 | 0.0256 (17) | 0.0201 (16) | 0.0214 (17) | 0.0030 (13) | 0.0066 (14) | 0.0040 (13) |
C3 | 0.0248 (17) | 0.0271 (17) | 0.0164 (16) | −0.0029 (14) | 0.0035 (14) | 0.0011 (13) |
C4 | 0.0278 (18) | 0.0242 (17) | 0.0202 (17) | −0.0045 (14) | 0.0083 (14) | −0.0054 (13) |
C5 | 0.0256 (17) | 0.0209 (16) | 0.0221 (17) | 0.0030 (13) | 0.0078 (14) | 0.0037 (13) |
C6 | 0.0215 (16) | 0.0285 (18) | 0.0168 (16) | −0.0033 (14) | 0.0016 (13) | −0.0014 (13) |
C7 | 0.043 (2) | 0.0242 (18) | 0.037 (2) | 0.0072 (17) | 0.0093 (19) | 0.0021 (16) |
C8 | 0.0286 (18) | 0.0246 (17) | 0.0266 (18) | 0.0004 (14) | 0.0110 (15) | 0.0026 (14) |
C9 | 0.0290 (18) | 0.0235 (17) | 0.0218 (17) | −0.0017 (14) | 0.0085 (15) | 0.0006 (14) |
C10 | 0.048 (3) | 0.034 (2) | 0.026 (2) | −0.0022 (19) | 0.0041 (19) | 0.0010 (17) |
C11 | 0.034 (2) | 0.034 (2) | 0.027 (2) | −0.0010 (17) | 0.0024 (17) | −0.0043 (16) |
C12 | 0.0229 (16) | 0.0238 (17) | 0.0209 (17) | −0.0002 (13) | 0.0058 (14) | −0.0017 (13) |
C13 | 0.0286 (18) | 0.0218 (16) | 0.0243 (18) | 0.0011 (14) | 0.0076 (15) | −0.0010 (14) |
C14 | 0.044 (2) | 0.0245 (19) | 0.040 (2) | 0.0053 (17) | 0.0019 (19) | −0.0006 (17) |
N1 | 0.0256 (15) | 0.0216 (14) | 0.0259 (15) | −0.0009 (12) | 0.0093 (13) | −0.0030 (12) |
N2 | 0.0320 (16) | 0.0212 (14) | 0.0222 (15) | −0.0017 (12) | 0.0075 (13) | −0.0022 (12) |
F1 | 0.0348 (12) | 0.0343 (12) | 0.0231 (11) | −0.0008 (10) | −0.0055 (10) | 0.0000 (9) |
F2 | 0.0386 (13) | 0.0240 (11) | 0.0330 (12) | 0.0079 (9) | 0.0047 (10) | 0.0040 (9) |
F3 | 0.0461 (14) | 0.0226 (11) | 0.0329 (12) | −0.0043 (10) | 0.0062 (11) | −0.0087 (9) |
I1 | 0.02873 (13) | 0.02442 (12) | 0.02914 (13) | −0.00499 (9) | 0.01176 (10) | −0.00770 (9) |
I2 | 0.03110 (14) | 0.04383 (16) | 0.01930 (12) | −0.00144 (11) | 0.00075 (10) | −0.00015 (10) |
I3 | 0.03278 (14) | 0.02334 (12) | 0.03413 (14) | 0.00554 (9) | 0.01321 (11) | 0.00662 (9) |
Geometric parameters (Å, º) top
C1—C6 | 1.376 (5) | C8—C9 | 1.390 (5) |
C1—C2 | 1.389 (5) | C9—N2 | 1.336 (5) |
C1—I1 | 2.092 (3) | C9—C10 | 1.495 (5) |
C2—F2 | 1.342 (4) | C10—H10A | 0.9800 |
C2—C3 | 1.386 (5) | C10—H10B | 0.9800 |
C3—C4 | 1.375 (5) | C10—H10C | 0.9800 |
C3—I2 | 2.074 (3) | C11—C12 | 1.505 (5) |
C4—F3 | 1.348 (4) | C11—H11A | 0.9800 |
C4—C5 | 1.386 (5) | C11—H11B | 0.9800 |
C5—C6 | 1.379 (5) | C11—H11C | 0.9800 |
C5—I3 | 2.088 (3) | C12—N1 | 1.336 (5) |
C6—F1 | 1.347 (4) | C12—C13 | 1.392 (5) |
C7—C8 | 1.506 (5) | C13—N2 | 1.337 (5) |
C7—H7A | 0.9800 | C13—C14 | 1.495 (5) |
C7—H7B | 0.9800 | C14—H14A | 0.9800 |
C7—H7C | 0.9800 | C14—H14B | 0.9800 |
C8—N1 | 1.342 (5) | C14—H14C | 0.9800 |
| | | |
C6—C1—C2 | 116.3 (3) | N2—C9—C10 | 117.2 (3) |
C6—C1—I1 | 121.9 (3) | C8—C9—C10 | 121.9 (3) |
C2—C1—I1 | 121.8 (3) | C9—C10—H10A | 109.5 |
F2—C2—C3 | 118.9 (3) | C9—C10—H10B | 109.5 |
F2—C2—C1 | 118.4 (3) | H10A—C10—H10B | 109.5 |
C3—C2—C1 | 122.6 (3) | C9—C10—H10C | 109.5 |
C4—C3—C2 | 117.5 (3) | H10A—C10—H10C | 109.5 |
C4—C3—I2 | 121.6 (3) | H10B—C10—H10C | 109.5 |
C2—C3—I2 | 120.9 (3) | C12—C11—H11A | 109.5 |
F3—C4—C3 | 118.5 (3) | C12—C11—H11B | 109.5 |
F3—C4—C5 | 118.4 (3) | H11A—C11—H11B | 109.5 |
C3—C4—C5 | 123.1 (3) | C12—C11—H11C | 109.5 |
C6—C5—C4 | 116.1 (3) | H11A—C11—H11C | 109.5 |
C6—C5—I3 | 122.1 (3) | H11B—C11—H11C | 109.5 |
C4—C5—I3 | 121.7 (3) | N1—C12—C13 | 120.9 (3) |
F1—C6—C1 | 118.0 (3) | N1—C12—C11 | 117.2 (3) |
F1—C6—C5 | 117.6 (3) | C13—C12—C11 | 122.0 (3) |
C1—C6—C5 | 124.4 (3) | N2—C13—C12 | 120.5 (3) |
C8—C7—H7A | 109.5 | N2—C13—C14 | 117.7 (3) |
C8—C7—H7B | 109.5 | C12—C13—C14 | 121.8 (3) |
H7A—C7—H7B | 109.5 | C13—C14—H14A | 109.5 |
C8—C7—H7C | 109.5 | C13—C14—H14B | 109.5 |
H7A—C7—H7C | 109.5 | H14A—C14—H14B | 109.5 |
H7B—C7—H7C | 109.5 | C13—C14—H14C | 109.5 |
N1—C8—C9 | 120.4 (3) | H14A—C14—H14C | 109.5 |
N1—C8—C7 | 116.9 (3) | H14B—C14—H14C | 109.5 |
C9—C8—C7 | 122.6 (3) | C12—N1—C8 | 118.6 (3) |
N2—C9—C8 | 120.9 (3) | C9—N2—C13 | 118.7 (3) |
| | | |
C6—C1—C2—F2 | 179.8 (3) | C4—C5—C6—F1 | −179.8 (3) |
I1—C1—C2—F2 | 0.2 (5) | I3—C5—C6—F1 | 1.1 (5) |
C6—C1—C2—C3 | −0.6 (6) | C4—C5—C6—C1 | 1.5 (6) |
I1—C1—C2—C3 | 179.7 (3) | I3—C5—C6—C1 | −177.7 (3) |
F2—C2—C3—C4 | −179.7 (3) | N1—C8—C9—N2 | 0.0 (6) |
C1—C2—C3—C4 | 0.7 (6) | C7—C8—C9—N2 | −179.1 (4) |
F2—C2—C3—I2 | 2.6 (5) | N1—C8—C9—C10 | 179.6 (4) |
C1—C2—C3—I2 | −177.0 (3) | C7—C8—C9—C10 | 0.5 (6) |
C2—C3—C4—F3 | 179.5 (3) | N1—C12—C13—N2 | 1.5 (6) |
I2—C3—C4—F3 | −2.8 (5) | C11—C12—C13—N2 | −178.0 (4) |
C2—C3—C4—C5 | 0.3 (6) | N1—C12—C13—C14 | 179.2 (4) |
I2—C3—C4—C5 | 178.0 (3) | C11—C12—C13—C14 | −0.3 (6) |
F3—C4—C5—C6 | 179.5 (3) | C13—C12—N1—C8 | −1.1 (5) |
C3—C4—C5—C6 | −1.4 (6) | C11—C12—N1—C8 | 178.4 (4) |
F3—C4—C5—I3 | −1.4 (5) | C9—C8—N1—C12 | 0.4 (6) |
C3—C4—C5—I3 | 177.8 (3) | C7—C8—N1—C12 | 179.5 (4) |
C2—C1—C6—F1 | −179.3 (3) | C8—C9—N2—C13 | 0.4 (6) |
I1—C1—C6—F1 | 0.4 (5) | C10—C9—N2—C13 | −179.2 (4) |
C2—C1—C6—C5 | −0.5 (6) | C12—C13—N2—C9 | −1.1 (6) |
I1—C1—C6—C5 | 179.1 (3) | C14—C13—N2—C9 | −178.9 (4) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
C7—H7A···I1 | 0.98 | 2.95 | 3.758 (4) | 140 |
C10—H10C···I3i | 0.98 | 3.19 | 3.749 (4) | 118 |
C11—H11C···I1 | 0.98 | 2.99 | 3.760 (4) | 136 |
C14—H14A···I3i | 0.98 | 3.01 | 3.782 (4) | 137 |
Symmetry code: (i) −x+2, y+1/2, −z+3/2. |
(db152) Dibenzo[
b,
e]pyridine–1,3,5-trifluoro-2,4,6-triiodobenzene (1/1)
top
Crystal data top
C6F3I3·C13H9N | Dx = 2.343 Mg m−3 |
Mr = 688.97 | Melting point: 443 K |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
a = 10.5079 (4) Å | Cell parameters from 9922 reflections |
b = 12.5632 (5) Å | θ = 2.2–28.3° |
c = 15.1563 (6) Å | µ = 4.83 mm−1 |
β = 102.490 (2)° | T = 200 K |
V = 1953.47 (13) Å3 | Block, yellow |
Z = 4 | 0.42 × 0.24 × 0.23 mm |
F(000) = 1264 | |
Data collection top
Bruker APEX-II CCD diffractometer | 4541 reflections with I > 2σ(I) |
Detector resolution: 8.33 pixels mm-1 | Rint = 0.022 |
φ and ω scans | θmax = 28.3°, θmin = 2.0° |
Absorption correction: multi-scan SADABS, Bruker (2003) | h = −14→13 |
Tmin = 0.500, Tmax = 0.746 | k = −16→16 |
43868 measured reflections | l = −20→20 |
4835 independent reflections | |
Refinement top
Refinement on F2 | 0 restraints |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.022 | H-atom parameters constrained |
wR(F2) = 0.054 | w = 1/[σ2(Fo2) + (0.0232P)2 + 3.1972P] where P = (Fo2 + 2Fc2)/3 |
S = 1.05 | (Δ/σ)max = 0.001 |
4835 reflections | Δρmax = 1.10 e Å−3 |
235 parameters | Δρmin = −1.47 e Å−3 |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Data were collected on a
Bruker AXS Kappa-single crystal diffractometer equipped with a sealed Mo tube
source (wavelength 0.71073 Å) APEX II CCD detector. Raw data collection and
processing were performed with the APEX II software package from BRUKER AXS
(Bruker, 2012). Semi-empirical absorption corrections based on equivalent
reflections were applied (Bruker, 2001). Systematic absences in the
diffraction dataset and unit cell parameters were consistent with monoclinic
P21/c (No. 14) for compounds A2,
B2, and C2.
The structures were solved by direct methods and refined with full-matrix
least-squares procedures based on F2, procedures using SHELXL2014
(Sheldrick, 2015) and WinGX (Farrugia 1999). All non-hydrogen atoms were
refined anisotropically. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
I1 | 0.69981 (2) | 0.63350 (2) | 0.37844 (2) | 0.03415 (5) | |
I5 | 0.42931 (2) | 0.69475 (2) | 0.68888 (2) | 0.03950 (6) | |
I3 | 0.80099 (2) | 0.32884 (2) | 0.69125 (2) | 0.05225 (7) | |
F6 | 0.51611 (17) | 0.72439 (13) | 0.50306 (11) | 0.0408 (4) | |
F4 | 0.60499 (17) | 0.49209 (15) | 0.75078 (11) | 0.0433 (4) | |
F2 | 0.80976 (18) | 0.44332 (15) | 0.50880 (12) | 0.0464 (4) | |
N7 | 0.7728 (2) | 0.68282 (17) | 0.20061 (15) | 0.0309 (4) | |
C5 | 0.5559 (2) | 0.6094 (2) | 0.62765 (16) | 0.0285 (5) | |
C1 | 0.6644 (2) | 0.5855 (2) | 0.50297 (15) | 0.0281 (5) | |
C2 | 0.7260 (2) | 0.4975 (2) | 0.54717 (17) | 0.0306 (5) | |
C20 | 0.8618 (2) | 0.7599 (2) | 0.19944 (18) | 0.0322 (5) | |
C4 | 0.6218 (2) | 0.5212 (2) | 0.66889 (17) | 0.0305 (5) | |
C3 | 0.7061 (2) | 0.4626 (2) | 0.62976 (17) | 0.0312 (5) | |
C6 | 0.5793 (2) | 0.63910 (19) | 0.54474 (17) | 0.0282 (5) | |
C15 | 0.9335 (3) | 0.7667 (3) | 0.1297 (2) | 0.0392 (6) | |
C8 | 0.7511 (3) | 0.6105 (2) | 0.13388 (18) | 0.0348 (5) | |
C19 | 0.8857 (3) | 0.8353 (2) | 0.2708 (2) | 0.0419 (6) | |
H19 | 0.8374 | 0.8320 | 0.3169 | 0.050* | |
C9 | 0.6577 (3) | 0.5286 (3) | 0.1354 (2) | 0.0463 (7) | |
H9 | 0.6102 | 0.5279 | 0.1821 | 0.056* | |
C13 | 0.8199 (3) | 0.6111 (3) | 0.06216 (19) | 0.0442 (7) | |
C16 | 1.0269 (3) | 0.8510 (3) | 0.1350 (3) | 0.0607 (10) | |
H16 | 1.0743 | 0.8585 | 0.0886 | 0.073* | |
C14 | 0.9107 (3) | 0.6910 (3) | 0.0622 (2) | 0.0508 (8) | |
H14 | 0.9576 | 0.6938 | 0.0152 | 0.061* | |
C18 | 0.9777 (3) | 0.9123 (3) | 0.2734 (3) | 0.0564 (9) | |
H18 | 0.9941 | 0.9615 | 0.3221 | 0.068* | |
C10 | 0.6358 (4) | 0.4519 (3) | 0.0715 (2) | 0.0638 (10) | |
H10 | 0.5741 | 0.3973 | 0.0740 | 0.077* | |
C12 | 0.7920 (5) | 0.5289 (4) | −0.0041 (2) | 0.0677 (11) | |
H12 | 0.8362 | 0.5281 | −0.0526 | 0.081* | |
C17 | 1.0486 (3) | 0.9198 (3) | 0.2049 (3) | 0.0649 (11) | |
H17 | 1.1124 | 0.9740 | 0.2079 | 0.078* | |
C11 | 0.7045 (5) | 0.4525 (4) | 0.0007 (3) | 0.0768 (13) | |
H11 | 0.6884 | 0.3982 | −0.0439 | 0.092* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
I1 | 0.04110 (10) | 0.03481 (9) | 0.02732 (8) | −0.00377 (7) | 0.00911 (7) | 0.00187 (6) |
I5 | 0.03726 (10) | 0.03943 (10) | 0.04554 (10) | 0.00062 (7) | 0.01718 (8) | −0.00627 (7) |
I3 | 0.04325 (11) | 0.04561 (12) | 0.06837 (14) | 0.01305 (9) | 0.01309 (10) | 0.02722 (10) |
F6 | 0.0463 (9) | 0.0334 (8) | 0.0429 (8) | 0.0117 (7) | 0.0103 (7) | 0.0097 (7) |
F4 | 0.0429 (9) | 0.0563 (11) | 0.0333 (8) | 0.0025 (8) | 0.0141 (7) | 0.0141 (7) |
F2 | 0.0526 (10) | 0.0456 (10) | 0.0469 (9) | 0.0175 (8) | 0.0237 (8) | 0.0037 (8) |
N7 | 0.0298 (10) | 0.0312 (11) | 0.0325 (10) | −0.0003 (8) | 0.0081 (8) | 0.0057 (8) |
C5 | 0.0249 (11) | 0.0308 (12) | 0.0302 (11) | −0.0020 (9) | 0.0067 (9) | −0.0026 (9) |
C1 | 0.0310 (11) | 0.0285 (11) | 0.0245 (10) | −0.0034 (9) | 0.0058 (9) | 0.0004 (9) |
C2 | 0.0291 (12) | 0.0314 (12) | 0.0327 (12) | 0.0024 (10) | 0.0095 (9) | −0.0004 (10) |
C20 | 0.0237 (11) | 0.0353 (13) | 0.0359 (12) | 0.0024 (10) | 0.0029 (9) | 0.0113 (10) |
C4 | 0.0262 (11) | 0.0356 (13) | 0.0294 (11) | −0.0040 (10) | 0.0055 (9) | 0.0049 (10) |
C3 | 0.0281 (12) | 0.0295 (12) | 0.0353 (12) | 0.0015 (9) | 0.0053 (10) | 0.0075 (10) |
C6 | 0.0271 (11) | 0.0253 (11) | 0.0304 (11) | −0.0004 (9) | 0.0026 (9) | 0.0019 (9) |
C15 | 0.0278 (12) | 0.0486 (16) | 0.0423 (14) | 0.0037 (11) | 0.0098 (11) | 0.0198 (13) |
C8 | 0.0376 (13) | 0.0355 (13) | 0.0301 (12) | 0.0041 (11) | 0.0048 (10) | 0.0062 (10) |
C19 | 0.0388 (15) | 0.0385 (15) | 0.0459 (15) | −0.0057 (12) | 0.0037 (12) | 0.0054 (12) |
C9 | 0.0583 (19) | 0.0401 (16) | 0.0385 (15) | −0.0084 (14) | 0.0057 (13) | 0.0014 (12) |
C13 | 0.0553 (18) | 0.0482 (17) | 0.0300 (13) | 0.0141 (14) | 0.0109 (12) | 0.0087 (12) |
C16 | 0.0360 (16) | 0.076 (3) | 0.072 (2) | −0.0073 (16) | 0.0161 (16) | 0.035 (2) |
C14 | 0.0508 (18) | 0.068 (2) | 0.0389 (15) | 0.0159 (16) | 0.0212 (14) | 0.0204 (15) |
C18 | 0.0506 (19) | 0.0448 (18) | 0.065 (2) | −0.0151 (15) | −0.0066 (16) | 0.0080 (16) |
C10 | 0.087 (3) | 0.048 (2) | 0.0497 (19) | −0.0125 (19) | −0.0011 (18) | −0.0065 (16) |
C12 | 0.099 (3) | 0.072 (3) | 0.0354 (16) | 0.018 (2) | 0.0212 (19) | −0.0037 (16) |
C17 | 0.0397 (17) | 0.064 (2) | 0.085 (3) | −0.0210 (16) | −0.0005 (17) | 0.026 (2) |
C11 | 0.123 (4) | 0.057 (2) | 0.045 (2) | 0.005 (3) | 0.005 (2) | −0.0167 (17) |
Geometric parameters (Å, º) top
I1—C1 | 2.090 (2) | C8—C13 | 1.430 (4) |
I5—C5 | 2.077 (2) | C19—C18 | 1.362 (4) |
I3—C3 | 2.070 (2) | C19—H19 | 0.9500 |
F6—C6 | 1.344 (3) | C9—C10 | 1.351 (5) |
F4—C4 | 1.342 (3) | C9—H9 | 0.9500 |
F2—C2 | 1.340 (3) | C13—C14 | 1.385 (5) |
N7—C8 | 1.342 (4) | C13—C12 | 1.427 (5) |
N7—C20 | 1.350 (3) | C16—C17 | 1.347 (6) |
C5—C4 | 1.382 (4) | C16—H16 | 0.9500 |
C5—C6 | 1.383 (3) | C14—H14 | 0.9500 |
C1—C6 | 1.378 (3) | C18—C17 | 1.406 (6) |
C1—C2 | 1.379 (4) | C18—H18 | 0.9500 |
C2—C3 | 1.384 (3) | C10—C11 | 1.417 (6) |
C20—C19 | 1.418 (4) | C10—H10 | 0.9500 |
C20—C15 | 1.428 (4) | C12—C11 | 1.342 (7) |
C4—C3 | 1.381 (4) | C12—H12 | 0.9500 |
C15—C14 | 1.379 (5) | C17—H17 | 0.9500 |
C15—C16 | 1.435 (5) | C11—H11 | 0.9500 |
C8—C9 | 1.426 (4) | | |
| | | |
C8—N7—C20 | 118.8 (2) | C18—C19—H19 | 119.9 |
C4—C5—C6 | 117.2 (2) | C20—C19—H19 | 119.9 |
C4—C5—I5 | 121.21 (18) | C10—C9—C8 | 120.9 (3) |
C6—C5—I5 | 121.54 (19) | C10—C9—H9 | 119.5 |
C6—C1—C2 | 116.9 (2) | C8—C9—H9 | 119.5 |
C6—C1—I1 | 122.25 (18) | C14—C13—C12 | 124.2 (3) |
C2—C1—I1 | 120.89 (18) | C14—C13—C8 | 117.7 (3) |
F2—C2—C1 | 118.7 (2) | C12—C13—C8 | 118.1 (3) |
F2—C2—C3 | 118.3 (2) | C17—C16—C15 | 121.0 (3) |
C1—C2—C3 | 123.1 (2) | C17—C16—H16 | 119.5 |
N7—C20—C19 | 118.6 (2) | C15—C16—H16 | 119.5 |
N7—C20—C15 | 122.1 (3) | C15—C14—C13 | 120.6 (3) |
C19—C20—C15 | 119.3 (3) | C15—C14—H14 | 119.7 |
F4—C4—C3 | 118.5 (2) | C13—C14—H14 | 119.7 |
F4—C4—C5 | 118.9 (2) | C19—C18—C17 | 120.8 (4) |
C3—C4—C5 | 122.6 (2) | C19—C18—H18 | 119.6 |
C4—C3—C2 | 117.1 (2) | C17—C18—H18 | 119.6 |
C4—C3—I3 | 122.07 (18) | C9—C10—C11 | 120.2 (4) |
C2—C3—I3 | 120.78 (19) | C9—C10—H10 | 119.9 |
F6—C6—C1 | 118.5 (2) | C11—C10—H10 | 119.9 |
F6—C6—C5 | 118.4 (2) | C11—C12—C13 | 121.2 (4) |
C1—C6—C5 | 123.1 (2) | C11—C12—H12 | 119.4 |
C14—C15—C20 | 118.2 (3) | C13—C12—H12 | 119.4 |
C14—C15—C16 | 123.9 (3) | C16—C17—C18 | 120.7 (3) |
C20—C15—C16 | 117.8 (3) | C16—C17—H17 | 119.6 |
N7—C8—C9 | 118.8 (3) | C18—C17—H17 | 119.6 |
N7—C8—C13 | 122.6 (3) | C12—C11—C10 | 120.9 (4) |
C9—C8—C13 | 118.7 (3) | C12—C11—H11 | 119.6 |
C18—C19—C20 | 120.3 (3) | C10—C11—H11 | 119.6 |
| | | |
C6—C1—C2—F2 | −179.9 (2) | C19—C20—C15—C14 | 178.5 (3) |
I1—C1—C2—F2 | 0.2 (3) | N7—C20—C15—C16 | −179.4 (3) |
C6—C1—C2—C3 | −0.2 (4) | C19—C20—C15—C16 | −0.4 (4) |
I1—C1—C2—C3 | 179.9 (2) | C20—N7—C8—C9 | 179.6 (2) |
C8—N7—C20—C19 | −179.1 (2) | C20—N7—C8—C13 | 0.8 (4) |
C8—N7—C20—C15 | −0.1 (4) | N7—C20—C19—C18 | 178.0 (3) |
C6—C5—C4—F4 | 177.8 (2) | C15—C20—C19—C18 | −1.0 (4) |
I5—C5—C4—F4 | −1.3 (3) | N7—C8—C9—C10 | −177.7 (3) |
C6—C5—C4—C3 | −1.2 (4) | C13—C8—C9—C10 | 1.1 (5) |
I5—C5—C4—C3 | 179.7 (2) | N7—C8—C13—C14 | −0.9 (4) |
F4—C4—C3—C2 | −177.1 (2) | C9—C8—C13—C14 | −179.7 (3) |
C5—C4—C3—C2 | 1.9 (4) | N7—C8—C13—C12 | 178.4 (3) |
F4—C4—C3—I3 | 2.4 (3) | C9—C8—C13—C12 | −0.4 (4) |
C5—C4—C3—I3 | −178.67 (19) | C14—C15—C16—C17 | −177.1 (3) |
F2—C2—C3—C4 | 178.5 (2) | C20—C15—C16—C17 | 1.7 (5) |
C1—C2—C3—C4 | −1.1 (4) | C20—C15—C14—C13 | 0.3 (4) |
F2—C2—C3—I3 | −1.0 (3) | C16—C15—C14—C13 | 179.2 (3) |
C1—C2—C3—I3 | 179.4 (2) | C12—C13—C14—C15 | −178.9 (3) |
C2—C1—C6—F6 | −179.1 (2) | C8—C13—C14—C15 | 0.3 (4) |
I1—C1—C6—F6 | 0.8 (3) | C20—C19—C18—C17 | 1.2 (5) |
C2—C1—C6—C5 | 1.0 (4) | C8—C9—C10—C11 | −0.9 (6) |
I1—C1—C6—C5 | −179.10 (19) | C14—C13—C12—C11 | 178.8 (4) |
C4—C5—C6—F6 | 179.8 (2) | C8—C13—C12—C11 | −0.5 (6) |
I5—C5—C6—F6 | −1.1 (3) | C15—C16—C17—C18 | −1.6 (6) |
C4—C5—C6—C1 | −0.3 (4) | C19—C18—C17—C16 | 0.1 (6) |
I5—C5—C6—C1 | 178.78 (19) | C13—C12—C11—C10 | 0.7 (7) |
N7—C20—C15—C14 | −0.5 (4) | C9—C10—C11—C12 | 0.0 (7) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
C19—H19···I1 | 0.95 | 3.12 | 3.779 (3) | 128 |
C9—H9···I1 | 0.95 | 3.21 | 3.846 (3) | 126 |
C19—H19···I1 | 0.95 | 3.12 | 3.779 (3) | 128 |
C9—H9···I1 | 0.95 | 3.21 | 3.846 (3) | 126 |
(db201) 1,10-Phenanthroline–1,3,5-trifluoro-2,4,6-triiodobenzene (1/1)
top
Crystal data top
C6F3I3·C12H8N2 | Dx = 2.408 Mg m−3 |
Mr = 689.96 | Melting point: 453 K |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
a = 8.6445 (3) Å | Cell parameters from 9717 reflections |
b = 14.0472 (6) Å | θ = 2.8–28.3° |
c = 15.8147 (6) Å | µ = 4.96 mm−1 |
β = 97.662 (2)° | T = 200 K |
V = 1903.25 (13) Å3 | Block, colourless |
Z = 4 | 0.51 × 0.37 × 0.37 mm |
F(000) = 1264 | |
Data collection top
Bruker APEXII CCD diffractometer | 4397 reflections with I > 2σ(I) |
Detector resolution: 8.33 pixels mm-1 | Rint = 0.024 |
φ and ω scans | θmax = 28.4°, θmin = 2.0° |
Absorption correction: multi-scan (SADABS; Bruker, 2003) | h = −10→11 |
Tmin = 0.468, Tmax = 0.746 | k = −18→18 |
28519 measured reflections | l = −21→21 |
4752 independent reflections | |
Refinement top
Refinement on F2 | 0 restraints |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.025 | H-atom parameters constrained |
wR(F2) = 0.059 | w = 1/[σ2(Fo2) + (0.0213P)2 + 4.2879P] where P = (Fo2 + 2Fc2)/3 |
S = 1.15 | (Δ/σ)max = 0.002 |
4752 reflections | Δρmax = 1.23 e Å−3 |
235 parameters | Δρmin = −0.60 e Å−3 |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Data were collected on a
Bruker AXS Kappa-single crystal diffractometer equipped with a sealed Mo tube
source (wavelength 0.71073 Å) APEX II CCD detector. Raw data collection and
processing were performed with the APEX II software package from BRUKER AXS
(Bruker, 2012). Semi-empirical absorption corrections based on equivalent
reflections were applied (Bruker, 2001). Systematic absences in the
diffraction dataset and unit cell parameters were consistent with monoclinic
P21/c (No. 14) for compounds A2,
B2, and C2.
The structures were solved by direct methods and refined with full-matrix
least-squares procedures based on F2, procedures using SHELXL2014
(Sheldrick, 2015) and WinGX (Farrugia 1999). All non-hydrogen atoms were
refined anisotropically. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
C1 | 0.7597 (3) | 0.4407 (2) | 0.64308 (18) | 0.0242 (6) | |
C2 | 0.8391 (4) | 0.3616 (2) | 0.67737 (18) | 0.0245 (6) | |
C3 | 0.9211 (4) | 0.3016 (2) | 0.62997 (19) | 0.0252 (6) | |
C4 | 0.9182 (4) | 0.3230 (2) | 0.5443 (2) | 0.0266 (6) | |
C5 | 0.8392 (4) | 0.3997 (2) | 0.50567 (18) | 0.0261 (6) | |
C6 | 0.7615 (4) | 0.4573 (2) | 0.55748 (19) | 0.0258 (6) | |
C8 | 0.2109 (5) | 0.4212 (3) | 0.8125 (2) | 0.0395 (8) | |
H8 | 0.1886 | 0.3878 | 0.7601 | 0.047* | |
C9 | 0.1598 (5) | 0.3816 (3) | 0.8841 (3) | 0.0490 (10) | |
H9 | 0.1062 | 0.3224 | 0.8807 | 0.059* | |
C10 | 0.1881 (5) | 0.4294 (3) | 0.9593 (3) | 0.0488 (10) | |
H10 | 0.1524 | 0.4046 | 1.0091 | 0.059* | |
C11 | 0.2708 (4) | 0.5157 (3) | 0.9628 (2) | 0.0368 (8) | |
C12 | 0.3029 (5) | 0.5706 (3) | 1.0397 (2) | 0.0483 (10) | |
H12 | 0.2673 | 0.5484 | 1.0904 | 0.058* | |
C13 | 0.3825 (5) | 0.6532 (3) | 1.0411 (2) | 0.0472 (10) | |
H13 | 0.4017 | 0.6885 | 1.0927 | 0.057* | |
C14 | 0.4385 (4) | 0.6881 (2) | 0.9659 (2) | 0.0320 (7) | |
C15 | 0.5223 (5) | 0.7734 (3) | 0.9655 (3) | 0.0420 (9) | |
H15 | 0.5450 | 0.8098 | 1.0163 | 0.050* | |
C16 | 0.5712 (5) | 0.8037 (3) | 0.8911 (3) | 0.0411 (8) | |
H16 | 0.6274 | 0.8616 | 0.8892 | 0.049* | |
C17 | 0.5367 (4) | 0.7478 (2) | 0.8183 (2) | 0.0356 (7) | |
H17 | 0.5701 | 0.7700 | 0.7670 | 0.043* | |
C19 | 0.4093 (3) | 0.6367 (2) | 0.88943 (19) | 0.0247 (6) | |
C20 | 0.3219 (4) | 0.5486 (2) | 0.88732 (19) | 0.0273 (6) | |
N7 | 0.2884 (3) | 0.5021 (2) | 0.81209 (17) | 0.0301 (6) | |
N18 | 0.4609 (3) | 0.6661 (2) | 0.81583 (17) | 0.0298 (6) | |
F2 | 0.8371 (2) | 0.34209 (15) | 0.76014 (12) | 0.0352 (4) | |
F4 | 0.9960 (3) | 0.26562 (16) | 0.49663 (13) | 0.0401 (5) | |
F6 | 0.6834 (3) | 0.53257 (16) | 0.52202 (13) | 0.0412 (5) | |
I1 | 0.63114 (2) | 0.52779 (2) | 0.71479 (2) | 0.02812 (6) | |
I3 | 1.04561 (3) | 0.18576 (2) | 0.68479 (2) | 0.03167 (6) | |
I5 | 0.81615 (3) | 0.42273 (2) | 0.37432 (2) | 0.03450 (6) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C1 | 0.0241 (14) | 0.0291 (15) | 0.0200 (13) | 0.0008 (12) | 0.0044 (10) | −0.0042 (11) |
C2 | 0.0251 (14) | 0.0288 (15) | 0.0201 (12) | −0.0020 (12) | 0.0049 (10) | 0.0007 (11) |
C3 | 0.0261 (14) | 0.0258 (14) | 0.0240 (13) | 0.0035 (12) | 0.0042 (11) | 0.0036 (11) |
C4 | 0.0269 (15) | 0.0281 (15) | 0.0256 (14) | 0.0041 (12) | 0.0062 (11) | −0.0054 (12) |
C5 | 0.0281 (15) | 0.0316 (15) | 0.0200 (13) | 0.0027 (12) | 0.0087 (11) | 0.0022 (11) |
C6 | 0.0268 (15) | 0.0279 (15) | 0.0226 (13) | 0.0052 (12) | 0.0030 (11) | 0.0016 (11) |
C8 | 0.045 (2) | 0.0353 (18) | 0.0388 (18) | −0.0113 (16) | 0.0070 (16) | −0.0006 (15) |
C9 | 0.057 (3) | 0.048 (2) | 0.042 (2) | −0.023 (2) | 0.0054 (18) | 0.0117 (18) |
C10 | 0.058 (3) | 0.057 (3) | 0.0326 (18) | −0.013 (2) | 0.0107 (17) | 0.0161 (17) |
C11 | 0.0402 (19) | 0.047 (2) | 0.0240 (15) | −0.0001 (16) | 0.0064 (13) | 0.0055 (14) |
C12 | 0.061 (3) | 0.065 (3) | 0.0196 (15) | −0.005 (2) | 0.0089 (15) | 0.0046 (16) |
C13 | 0.063 (3) | 0.056 (2) | 0.0219 (15) | 0.003 (2) | 0.0033 (16) | −0.0080 (16) |
C14 | 0.0360 (17) | 0.0318 (16) | 0.0272 (15) | 0.0068 (14) | 0.0006 (13) | −0.0039 (13) |
C15 | 0.050 (2) | 0.0336 (18) | 0.0409 (19) | 0.0030 (16) | −0.0008 (16) | −0.0133 (15) |
C16 | 0.043 (2) | 0.0242 (16) | 0.056 (2) | −0.0018 (14) | 0.0049 (17) | −0.0058 (15) |
C17 | 0.0404 (19) | 0.0246 (15) | 0.0436 (19) | −0.0008 (14) | 0.0124 (15) | −0.0005 (14) |
C19 | 0.0231 (14) | 0.0265 (14) | 0.0246 (13) | 0.0063 (11) | 0.0033 (11) | −0.0001 (11) |
C20 | 0.0298 (15) | 0.0296 (15) | 0.0223 (13) | 0.0034 (12) | 0.0031 (11) | 0.0030 (12) |
N7 | 0.0353 (15) | 0.0306 (14) | 0.0253 (12) | −0.0039 (12) | 0.0078 (11) | −0.0019 (11) |
N18 | 0.0339 (15) | 0.0263 (13) | 0.0306 (13) | −0.0013 (11) | 0.0101 (11) | −0.0021 (11) |
F2 | 0.0433 (11) | 0.0429 (11) | 0.0205 (8) | 0.0084 (9) | 0.0085 (8) | 0.0046 (8) |
F4 | 0.0497 (12) | 0.0418 (11) | 0.0314 (10) | 0.0183 (10) | 0.0148 (9) | −0.0039 (9) |
F6 | 0.0571 (14) | 0.0397 (12) | 0.0282 (10) | 0.0231 (10) | 0.0102 (9) | 0.0077 (8) |
I1 | 0.03073 (11) | 0.03111 (11) | 0.02333 (10) | 0.00403 (8) | 0.00654 (7) | −0.00551 (7) |
I3 | 0.03452 (12) | 0.02701 (11) | 0.03367 (11) | 0.00512 (8) | 0.00526 (8) | 0.00532 (8) |
I5 | 0.04263 (13) | 0.04277 (13) | 0.01953 (9) | 0.00434 (10) | 0.00940 (8) | 0.00139 (8) |
Geometric parameters (Å, º) top
C1—C6 | 1.376 (4) | C10—H10 | 0.9500 |
C1—C2 | 1.378 (4) | C11—C20 | 1.405 (4) |
C1—I1 | 2.086 (3) | C11—C12 | 1.435 (5) |
C2—F2 | 1.340 (3) | C12—C13 | 1.348 (6) |
C2—C3 | 1.384 (4) | C12—H12 | 0.9500 |
C3—C4 | 1.385 (4) | C13—C14 | 1.429 (5) |
C3—I3 | 2.076 (3) | C13—H13 | 0.9500 |
C4—F4 | 1.344 (3) | C14—C15 | 1.401 (5) |
C4—C5 | 1.374 (4) | C14—C19 | 1.403 (4) |
C5—C6 | 1.388 (4) | C15—C16 | 1.370 (6) |
C5—I5 | 2.085 (3) | C15—H15 | 0.9500 |
C6—F6 | 1.337 (4) | C16—C17 | 1.393 (5) |
C8—N7 | 1.319 (4) | C16—H16 | 0.9500 |
C8—C9 | 1.385 (5) | C17—N18 | 1.319 (4) |
C8—H8 | 0.9500 | C17—H17 | 0.9500 |
C9—C10 | 1.359 (6) | C19—N18 | 1.365 (4) |
C9—H9 | 0.9500 | C19—C20 | 1.448 (5) |
C10—C11 | 1.405 (6) | C20—N7 | 1.354 (4) |
| | | |
C6—C1—C2 | 117.0 (3) | C10—C11—C12 | 122.5 (3) |
C6—C1—I1 | 120.8 (2) | C20—C11—C12 | 119.7 (4) |
C2—C1—I1 | 122.1 (2) | C13—C12—C11 | 121.2 (3) |
F2—C2—C1 | 118.6 (3) | C13—C12—H12 | 119.4 |
F2—C2—C3 | 118.6 (3) | C11—C12—H12 | 119.4 |
C1—C2—C3 | 122.8 (3) | C12—C13—C14 | 120.7 (3) |
C2—C3—C4 | 117.0 (3) | C12—C13—H13 | 119.7 |
C2—C3—I3 | 121.7 (2) | C14—C13—H13 | 119.7 |
C4—C3—I3 | 121.3 (2) | C15—C14—C19 | 118.0 (3) |
F4—C4—C5 | 118.5 (3) | C15—C14—C13 | 122.0 (3) |
F4—C4—C3 | 118.3 (3) | C19—C14—C13 | 119.9 (3) |
C5—C4—C3 | 123.2 (3) | C16—C15—C14 | 119.3 (3) |
C4—C5—C6 | 116.5 (3) | C16—C15—H15 | 120.4 |
C4—C5—I5 | 122.7 (2) | C14—C15—H15 | 120.4 |
C6—C5—I5 | 120.5 (2) | C15—C16—C17 | 118.5 (3) |
F6—C6—C1 | 118.4 (3) | C15—C16—H16 | 120.7 |
F6—C6—C5 | 118.1 (3) | C17—C16—H16 | 120.7 |
C1—C6—C5 | 123.5 (3) | N18—C17—C16 | 124.5 (3) |
N7—C8—C9 | 124.6 (4) | N18—C17—H17 | 117.8 |
N7—C8—H8 | 117.7 | C16—C17—H17 | 117.8 |
C9—C8—H8 | 117.7 | N18—C19—C14 | 122.5 (3) |
C10—C9—C8 | 118.5 (4) | N18—C19—C20 | 117.9 (3) |
C10—C9—H9 | 120.8 | C14—C19—C20 | 119.5 (3) |
C8—C9—H9 | 120.8 | N7—C20—C11 | 122.2 (3) |
C9—C10—C11 | 119.5 (3) | N7—C20—C19 | 118.8 (3) |
C9—C10—H10 | 120.3 | C11—C20—C19 | 118.9 (3) |
C11—C10—H10 | 120.3 | C8—N7—C20 | 117.4 (3) |
C10—C11—C20 | 117.8 (3) | C17—N18—C19 | 117.1 (3) |
| | | |
C6—C1—C2—F2 | −178.6 (3) | C10—C11—C12—C13 | 179.9 (4) |
I1—C1—C2—F2 | −2.1 (4) | C20—C11—C12—C13 | −0.5 (6) |
C6—C1—C2—C3 | 1.5 (5) | C11—C12—C13—C14 | −0.5 (7) |
I1—C1—C2—C3 | 178.1 (2) | C12—C13—C14—C15 | −179.7 (4) |
F2—C2—C3—C4 | 178.8 (3) | C12—C13—C14—C19 | 0.6 (6) |
C1—C2—C3—C4 | −1.3 (5) | C19—C14—C15—C16 | 0.5 (5) |
F2—C2—C3—I3 | −2.0 (4) | C13—C14—C15—C16 | −179.2 (4) |
C1—C2—C3—I3 | 177.9 (2) | C14—C15—C16—C17 | −0.5 (6) |
C2—C3—C4—F4 | −179.6 (3) | C15—C16—C17—N18 | −0.8 (6) |
I3—C3—C4—F4 | 1.1 (4) | C15—C14—C19—N18 | 0.9 (5) |
C2—C3—C4—C5 | 0.2 (5) | C13—C14—C19—N18 | −179.4 (3) |
I3—C3—C4—C5 | −179.0 (3) | C15—C14—C19—C20 | −179.5 (3) |
F4—C4—C5—C6 | −179.5 (3) | C13—C14—C19—C20 | 0.2 (5) |
C3—C4—C5—C6 | 0.7 (5) | C10—C11—C20—N7 | 2.8 (5) |
F4—C4—C5—I5 | 6.5 (4) | C12—C11—C20—N7 | −176.8 (4) |
C3—C4—C5—I5 | −173.3 (3) | C10—C11—C20—C19 | −179.1 (3) |
C2—C1—C6—F6 | 178.9 (3) | C12—C11—C20—C19 | 1.3 (5) |
I1—C1—C6—F6 | 2.3 (4) | N18—C19—C20—N7 | −3.3 (4) |
C2—C1—C6—C5 | −0.6 (5) | C14—C19—C20—N7 | 177.0 (3) |
I1—C1—C6—C5 | −177.2 (3) | N18—C19—C20—C11 | 178.5 (3) |
C4—C5—C6—F6 | −180.0 (3) | C14—C19—C20—C11 | −1.2 (5) |
I5—C5—C6—F6 | −5.9 (4) | C9—C8—N7—C20 | 0.9 (6) |
C4—C5—C6—C1 | −0.4 (5) | C11—C20—N7—C8 | −3.0 (5) |
I5—C5—C6—C1 | 173.7 (2) | C19—C20—N7—C8 | 178.9 (3) |
N7—C8—C9—C10 | 1.3 (7) | C16—C17—N18—C19 | 2.1 (5) |
C8—C9—C10—C11 | −1.4 (7) | C14—C19—N18—C17 | −2.1 (5) |
C9—C10—C11—C20 | −0.5 (6) | C20—C19—N18—C17 | 178.2 (3) |
C9—C10—C11—C12 | 179.1 (4) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
C8—H8···I3i | 0.95 | 3.26 | 4.037 (4) | 141 |
C9—H9···F4ii | 0.95 | 2.50 | 3.182 (4) | 128 |
C16—H16···F6iii | 0.95 | 2.57 | 3.159 (4) | 121 |
C8—H8···I3i | 0.95 | 3.26 | 4.037 (4) | 141 |
C9—H9···F4ii | 0.95 | 2.50 | 3.182 (4) | 128 |
C16—H16···F6iii | 0.95 | 2.57 | 3.159 (4) | 121 |
Symmetry codes: (i) x−1, y, z; (ii) x−1, −y+1/2, z+1/2; (iii) x, −y+3/2, z+1/2. |
Halogen-bond geometrical parameters, including the halogen-bond length
(dI···N), halogen-bond angle (θC—I···N) and reduced distance
parameter (RXB) top | Compound | dI···N (Å) | θC—I···N (°) | RXB |
A1 | (ACD)(p-DITFB) | 2.971 | 176.55 | 0.842 |
A2 | (ACD)(sym-TFTIB) | 3.022 | 173.60 | 0.856 |
B1 | (PHN)(p-DITFB) | 3.010 | 159.03 | 0.853 |
| | 3.274 | 149.76 | 0.927 |
B2 | (PHN)(sym-TFTIB) | 3.020 | 175.68 | 0.856 |
| | 3.148 | 164.18 | 0.892 |
C1 | (TMP)(p-DITFB) | 3.067 | 177.15 | 0.869 |
C2 | (TMP)(sym-TFTIB) | 2.991 | 178.09 | 0.847 |
| | 2.993 | 179.81 | 0.848 |
D1 | (HMT)(p-DITFB) | 2.845 | 169.05 | 0.806 |
D2 | (HMT)(sym-DITFB) | 2.864 | 171.72 | 0.811 |
| | 2.879 | 170.53 | 0.816 |
13C chemical shifts of the carbons covalently bonded to nitrogen on the
halogen-bond acceptors, obtained from 1H→13C cross polarization
experiments top | XB acceptor | δiso(13C)/ppma XB acceptor | δiso(13C)/ppma cocrystal with 1 | δiso(13C)/ppma cocrystal with 2 |
A | ACD | 148.7±1.6 | 148.7±0.2 | 149.6±0.3 |
| | | | 147.7±0.2 |
B | PHN | 150.7±0.3 | 150.0±0.2 | 151.4±0.2 |
| | 145.0±0.2 | 148.4±0.2 | 149.4±0.2 |
| | | 144.0±0.3 | 145.3±0.5 |
C | TMP | 149.7±0.1 | 149.4±0.2 | 149.7±0.3 |
| | 149.0±0.1 | | |
D | HMT | 73.4±0.1 | 71.8±0.2 | 71.8±0.2 |
| | 73.2±0.1 | 71.8±0.2 | 71.8±0.2 |
The peak positions reported may not correspond exactly to the true chemical
shifts as a result of peak overlap, and possibly due to residual 14N dipolar
coupling; however, the effect of the latter is expected to be negligible under
the experimental conditions used. |
13C chemical shifts of the halogen-bond donor obtained from 19F–13C
cross polarization, and the calculated dipolar coupling second moments
between the 19F of the halogen-bond donor and the 13C of the halogen-bond
acceptor topCompound | Experimental δiso(13C)/ppm | Asignments | Average calculated dipolar coupling second moment (s-2)b |
1 | 147.6±0.4 | C—F | |
| 76.8±1.4 | C—I | |
2 | 162.6±0.89 | C–F | |
| 67.6±2.4 | C—I | |
A1 | 146.5±0.4 | C—F | 1.41 × 105 |
| 79.2±2.3 | C—I | |
A2 | 160.8±0.8 | C—F | 1.55 × 105 |
| 66.1±4.7 | C—I | |
B1 | 147.67±0.5 | C—F | 2.02 × 105 |
| 145.9±0.4 | C—F | |
| 79.1±1.9 | C—I | |
| 76.7±1.8 | C—I | |
B2 | 162.3±1.34 | C—F | 1.94 × 105 |
| 68.5±3.3 | C—I | |
C1 | 147.4±0.4 | C—F | 2.15 × 105 |
| 80.3±2.4 | C—I | |
C2 | 162.3±0.8 | C—F | 1.91 × 105 |
| 71.5±11.0a | C—I | |
D1 | 147.1±0.4 | C—F | 2.20 × 105 |
| 80.8±2.7 | C—I | |
D2 | 162.8±0.9 | C—F | 1.03 × 105 |
| 71.8±7.9a | C—I | |
Notes: (a) the large uncertainty in the chemical shift reflects the
fact that there are multiple unresolved carbon–iodine sites. (b) The
second moment was calculated using equation 3, using the fluorine–carbon
distances between the halogen-bond donor and the halogen-bond acceptor, with a
cut-off distance of 10 Å. |
Experimental δiso(19F) chemical shifts of the halogen-bond donor top | XB Acceptor | δiso(19F)/ppm cocrystal with 1 | δiso(19F)/ppm cocrystal with 2 |
| None (pure 1 or 2) | -112.5±0.4 | -61.9±0.2 |
| | -115.6±0.3 | -64.2±0.3 |
| | | -66.5±0.3 |
A | ACD | -114.1±0.7 | -68.2±0.3 |
| | | -70.8±0.3 |
| | | -72.3±0.4 |
B | PHN | -114.9±0.3 | -71.6±0.3 |
| | -118.3±0.4 | |
C | TMP | -119.2±0.5 | -68.5±0.3 |
| | | -72.3±0.4 |
D | HMT | -117.4±0.3 | -70.4±0.4 |
| | -120.4±0.3 | -72.4±0.4 |
| | | -77.4±0.3 |