Scanning X-ray diffraction on cardiac tissue: automatized data analysis and processing

Nicolas, J.-D.; Bernhardt, M.; Markus, A.; Alves, F.; Burghammer, M.; Salditt, T.

doi:10.1107/S1600577517011936

Journal of Synchrotron Radiation Journal of
Synchrotron Radiation

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Figure 5
Options for pre-processing of diffraction data. Shown in (a) is a raw detector image recorded with an Eiger 4M detector. Modular gaps and hot pixels are represented by 2¹⁶ counts. By defining a logical mask for hot pixels, modular gaps and the beamstop area (b), the masked pixels are set to zero in the diffraction pattern (c). (d) In addition, ROIs can be defined and data can be binned by binning factors $[i\in{\bb{N}}]$ along each dimension (here, binning factor 2 along each dimension). (e) Radial mask defining a range from 0.22 nm⁻¹ to 0.38 nm⁻¹ and (f) azimuthal mask ranging from 120 to 160°.

JOURNAL OF
SYNCHROTRON
RADIATION

ISSN: 1600-5775

Volume 24| Part 6| November 2017| Pages 1163-1172

https://doi.org/10.1107/S1600577517011936

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