supplementary materials


ci2574 scheme

Acta Cryst. (2008). E64, o781    [ doi:10.1107/S160053680800843X ]

N'-(2-Hydroxy-5-chlorobenzylidene)-4-nitrobenzohydrazide methanol solvate

L. Han, S.-S. Huang, Q.-B. Huang, X.-M. Zhou and Y.-P. Diao

Abstract top

The title compound, C14H10ClN3O4·CH4O, was synthesized from the reaction of 5-chlorosalicylaldehyde with 4-nitrobenzohydrazide in methanol. The Schiff base molecule is nearly planar, with a dihedral angle of 9.1 (3)° between the two benzene rings. The methanol solvent molecules are linked to the Schiff base molecules by N-H...O, O-H...N and O-H...O hydrogen bonds, forming chains running parallel to the a axis.

Comment top

Schiff base compounds have been found to have potential pharmacological and antitumor properties (Brückner et al., 2000; Harrop et al., 2003; Ren et al., 2002). Recently, a few Schiff base compounds derived from the reaction of aldehydes with benzohydrazides have been reported (Diao 2007; Diao, Huang et al., 2008; Diao, Shu et al., 2007; Diao, Zhen et al., 2008; Huang et al., 2007; Li et al., 2007; Ma et al., 2008; Wang et al., 2008). As a further study of such compounds, we report here the crystal structure of the title compound.

The asymmetric unit of the title compound consists of a Schiff base molecule and a lattice methanol molecule. The Schiff base molecule is nearly planar with the dihedral angle between the two benzene rings of 9.1 (3)°. The dihedral angle between the C1-C6 benzene ring and the O1/N1/O2 nitryl plane is 6.4 (3) °. The torsion angles C9—C8—N3—N2 and C4—C7—N2—N3 are 179.8 (2)° and -173.6 (2)°, respectively. The methanol solvent molecules are linked to the Schiff base molecules by N—H···O, O—H···N and O—H···O hydrogen bonds (Table 1), forming chains running along the a axis (Fig. 2).

Related literature top

For related structures, see: Brückner et al. (2000); Diao (2007); Diao, Huang et al. (2008); Diao, Shu et al. (2007); Diao, Zhen et al. (2008); Harrop et al. (2003); Huang et al. (2007); Li et al. (2007); Ma et al. (2008); Ren et al. (2002); Wang et al. (2008).

Experimental top

5-Chlorosalicylaldehyde (0.1 mmol, 15.7 mg) and 4-nitrobenzohydrazide (0.1 mmol, 18.1 mg) were dissolved in a methanol solution (20 ml). The mixture was stirred at reflux for 1 h and cooled to room temperature. After keeping the solution in air for a week, yellow block-like crystals were formed.

Refinement top

Atom H2A was located from a difference Fourier map and refined isotropically, with the N–H distance restrained to 0.90 (1) Å. All other H atoms were placed in idealized positions and constrained to ride on their parent atoms, with C–H = 0.93–0.96 Å, O–H = 0.82 Å, and with Uiso(H) = 1.2Ueq(C) or 1.5Ueq(O and methyl C).

Computing details top

Data collection: SMART (Bruker, 2000); cell refinement: SAINT (Bruker, 2000); data reduction: SAINT (Bruker, 2000); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).

Figures top
[Figure 1] Fig. 1. The molecular structure of the title compound with displacement ellipsoids drawn at the 30% probability level.
[Figure 2] Fig. 2. Crystal packing of the compound viewed along the c axis. Intermolecular hydrogen bonds are shown as dashed lines. H atoms not involved in the interactions have been omitted.
N'-(2-Hydroxy-5-chlorobenzylidene)-4-nitrobenzohydrazide methanol solvate top
Crystal data top
C14H10ClN3O4·CH4OF000 = 728
Mr = 351.74Dx = 1.484 Mg m3
Monoclinic, P21/nMo Kα radiation
λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 1014 reflections
a = 6.628 (1) Åθ = 2.5–24.3º
b = 18.980 (3) ŵ = 0.27 mm1
c = 12.521 (2) ÅT = 298 (2) K
β = 91.29 (3)ºBlock, yellow
V = 1574.7 (4) Å30.20 × 0.18 × 0.17 mm
Z = 4
Data collection top
Bruker SMART CCD area-detector
diffractometer
3259 independent reflections
Radiation source: fine-focus sealed tube1776 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.056
T = 298(2) Kθmax = 26.5º
ω scansθmin = 2.0º
Absorption correction: multi-scan
(SADABS; Bruker, 2000)
h = 8→7
Tmin = 0.947, Tmax = 0.955k = 22→23
9258 measured reflectionsl = 15→15
Refinement top
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.055H atoms treated by a mixture of
independent and constrained refinement
wR(F2) = 0.147  w = 1/[σ2(Fo2) + (0.0624P)2]
where P = (Fo2 + 2Fc2)/3
S = 1.01(Δ/σ)max = 0.001
3259 reflectionsΔρmax = 0.23 e Å3
223 parametersΔρmin = 0.29 e Å3
1 restraintExtinction correction: none
Primary atom site location: structure-invariant direct methods
Crystal data top
C14H10ClN3O4·CH4OV = 1574.7 (4) Å3
Mr = 351.74Z = 4
Monoclinic, P21/nMo Kα
a = 6.628 (1) ŵ = 0.27 mm1
b = 18.980 (3) ÅT = 298 (2) K
c = 12.521 (2) Å0.20 × 0.18 × 0.17 mm
β = 91.29 (3)º
Data collection top
Bruker SMART CCD area-detector
diffractometer
3259 independent reflections
Absorption correction: multi-scan
(SADABS; Bruker, 2000)
1776 reflections with I > 2σ(I)
Tmin = 0.947, Tmax = 0.955Rint = 0.056
9258 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0551 restraint
wR(F2) = 0.147H atoms treated by a mixture of
independent and constrained refinement
S = 1.01Δρmax = 0.23 e Å3
3259 reflectionsΔρmin = 0.29 e Å3
223 parameters
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
Cl10.68929 (13)0.04557 (4)0.92197 (7)0.0738 (3)
N10.5353 (5)0.73926 (13)0.88443 (19)0.0595 (7)
N20.8868 (3)0.42344 (11)0.86323 (19)0.0495 (6)
N30.9879 (3)0.35976 (11)0.86989 (17)0.0478 (6)
O10.3541 (4)0.73510 (11)0.89719 (19)0.0807 (7)
O20.6246 (4)0.79469 (11)0.87488 (19)0.0824 (7)
O31.1727 (3)0.48808 (10)0.86669 (16)0.0623 (6)
O41.2997 (3)0.26460 (10)0.87161 (18)0.0659 (6)
H41.25200.30440.87350.099*
O50.4676 (3)0.40021 (11)0.80587 (18)0.0674 (6)
H50.37270.42320.82810.101*
C10.6514 (4)0.67373 (13)0.8806 (2)0.0470 (7)
C20.5546 (4)0.61164 (14)0.9009 (2)0.0548 (8)
H20.41870.61130.91770.066*
C30.6617 (4)0.54978 (14)0.8959 (2)0.0518 (8)
H30.59770.50740.91080.062*
C40.8634 (4)0.54947 (13)0.8691 (2)0.0426 (6)
C50.9558 (4)0.61350 (14)0.8499 (2)0.0521 (7)
H5A1.09150.61430.83270.063*
C60.8517 (5)0.67595 (14)0.8558 (2)0.0549 (8)
H60.91560.71870.84320.066*
C70.9882 (4)0.48478 (14)0.8649 (2)0.0443 (6)
C80.8723 (4)0.30647 (14)0.8789 (2)0.0488 (7)
H80.73380.31400.88060.059*
C90.9467 (4)0.23460 (13)0.8868 (2)0.0443 (7)
C101.1506 (4)0.21677 (14)0.8820 (2)0.0499 (7)
C111.2063 (5)0.14648 (15)0.8879 (3)0.0635 (9)
H111.34190.13440.88420.076*
C121.0660 (5)0.09492 (15)0.8992 (2)0.0607 (8)
H121.10580.04800.90250.073*
C130.8651 (4)0.11224 (14)0.9058 (2)0.0503 (7)
C140.8072 (4)0.18097 (14)0.8996 (2)0.0497 (7)
H140.67110.19220.90420.060*
C150.4413 (6)0.38939 (17)0.6953 (3)0.0850 (11)
H15A0.37670.42980.66360.127*
H15B0.35870.34850.68300.127*
H15C0.57040.38240.66370.127*
H2A0.7515 (16)0.4223 (17)0.856 (2)0.080*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
Cl10.0638 (6)0.0528 (5)0.1047 (7)0.0066 (4)0.0002 (5)0.0189 (4)
N10.071 (2)0.0480 (16)0.0598 (16)0.0150 (14)0.0003 (14)0.0022 (12)
N20.0387 (13)0.0391 (12)0.0704 (16)0.0081 (12)0.0020 (12)0.0003 (11)
N30.0466 (15)0.0393 (13)0.0575 (15)0.0082 (11)0.0014 (11)0.0002 (11)
O10.0651 (17)0.0686 (15)0.1087 (19)0.0264 (13)0.0099 (14)0.0013 (12)
O20.099 (2)0.0440 (13)0.1044 (19)0.0093 (13)0.0000 (15)0.0054 (12)
O30.0380 (13)0.0549 (12)0.0939 (16)0.0046 (10)0.0008 (11)0.0051 (11)
O40.0451 (13)0.0489 (12)0.1037 (17)0.0004 (10)0.0008 (12)0.0042 (12)
O50.0445 (13)0.0623 (14)0.0952 (17)0.0103 (10)0.0024 (11)0.0156 (11)
C10.053 (2)0.0405 (15)0.0476 (16)0.0108 (13)0.0011 (14)0.0005 (12)
C20.0428 (17)0.0491 (17)0.073 (2)0.0058 (14)0.0056 (15)0.0036 (15)
C30.0441 (18)0.0399 (15)0.071 (2)0.0018 (13)0.0055 (15)0.0016 (13)
C40.0378 (16)0.0421 (15)0.0479 (16)0.0023 (12)0.0013 (12)0.0007 (12)
C50.0388 (17)0.0523 (17)0.0653 (19)0.0020 (14)0.0007 (14)0.0024 (14)
C60.055 (2)0.0425 (16)0.067 (2)0.0003 (14)0.0032 (16)0.0048 (14)
C70.0377 (17)0.0446 (15)0.0505 (17)0.0030 (13)0.0018 (13)0.0017 (13)
C80.0412 (17)0.0454 (16)0.0599 (18)0.0082 (13)0.0017 (14)0.0011 (13)
C90.0389 (16)0.0425 (15)0.0514 (17)0.0040 (12)0.0009 (13)0.0010 (12)
C100.0435 (18)0.0461 (16)0.0600 (18)0.0012 (14)0.0002 (14)0.0021 (14)
C110.0441 (18)0.0485 (17)0.098 (2)0.0127 (15)0.0008 (16)0.0038 (17)
C120.058 (2)0.0437 (17)0.080 (2)0.0052 (15)0.0042 (16)0.0064 (15)
C130.0495 (18)0.0420 (15)0.0594 (18)0.0005 (13)0.0024 (14)0.0065 (13)
C140.0379 (17)0.0496 (16)0.0616 (18)0.0062 (13)0.0014 (13)0.0011 (14)
C150.092 (3)0.076 (2)0.087 (3)0.000 (2)0.006 (2)0.003 (2)
Geometric parameters (Å, °) top
Cl1—C131.735 (3)C4—C51.384 (3)
N1—O21.215 (3)C4—C71.482 (4)
N1—O11.217 (3)C5—C61.374 (4)
N1—C11.464 (3)C5—H5A0.93
N2—C71.344 (3)C6—H60.93
N2—N31.384 (3)C8—C91.453 (3)
N2—H2A0.899 (10)C8—H80.93
N3—C81.275 (3)C9—C141.387 (4)
O3—C71.225 (3)C9—C101.396 (4)
O4—C101.350 (3)C10—C111.386 (4)
O4—H40.82C11—C121.360 (4)
O5—C151.407 (4)C11—H110.93
O5—H50.82C12—C131.375 (4)
C1—C21.368 (4)C12—H120.93
C1—C61.371 (4)C13—C141.362 (3)
C2—C31.374 (3)C14—H140.93
C2—H20.93C15—H15A0.96
C3—C41.386 (4)C15—H15B0.96
C3—H30.93C15—H15C0.96
O2—N1—O1123.6 (3)N2—C7—C4116.0 (2)
O2—N1—C1118.3 (3)N3—C8—C9123.2 (3)
O1—N1—C1118.0 (3)N3—C8—H8118.4
C7—N2—N3121.0 (2)C9—C8—H8118.4
C7—N2—H2A121 (2)C14—C9—C10118.4 (2)
N3—N2—H2A118 (2)C14—C9—C8118.1 (2)
C8—N3—N2114.0 (2)C10—C9—C8123.5 (3)
C10—O4—H4109.5O4—C10—C11117.2 (3)
C15—O5—H5109.5O4—C10—C9123.6 (2)
C2—C1—C6121.9 (3)C11—C10—C9119.2 (3)
C2—C1—N1118.5 (3)C12—C11—C10121.1 (3)
C6—C1—N1119.6 (3)C12—C11—H11119.4
C1—C2—C3118.9 (3)C10—C11—H11119.4
C1—C2—H2120.6C11—C12—C13120.0 (3)
C3—C2—H2120.6C11—C12—H12120.0
C2—C3—C4121.1 (3)C13—C12—H12120.0
C2—C3—H3119.4C14—C13—C12119.8 (3)
C4—C3—H3119.4C14—C13—Cl1121.1 (2)
C5—C4—C3118.1 (2)C12—C13—Cl1119.1 (2)
C5—C4—C7118.2 (2)C13—C14—C9121.5 (3)
C3—C4—C7123.7 (2)C13—C14—H14119.3
C6—C5—C4121.6 (3)C9—C14—H14119.3
C6—C5—H5A119.2O5—C15—H15A109.5
C4—C5—H5A119.2O5—C15—H15B109.5
C1—C6—C5118.4 (3)H15A—C15—H15B109.5
C1—C6—H6120.8O5—C15—H15C109.5
C5—C6—H6120.8H15A—C15—H15C109.5
O3—C7—N2122.9 (2)H15B—C15—H15C109.5
O3—C7—C4121.0 (2)
Hydrogen-bond geometry (Å, °) top
D—H···AD—HH···AD···AD—H···A
O4—H4···N30.822.042.745 (3)144
O4—H4···O5i0.822.472.930 (3)116
O5—H5···O3ii0.821.882.692 (3)171
N2—H2A···O50.899 (10)2.016 (13)2.888 (3)163 (3)
Symmetry codes: (i) x+1, y, z; (ii) x−1, y, z.
Table 1
Hydrogen-bond geometry (Å, °)
top
D—H···AD—HH···AD···AD—H···A
O4—H4···N30.822.042.745 (3)144
O4—H4···O5i0.822.472.930 (3)116
O5—H5···O3ii0.821.882.692 (3)171
N2—H2A···O50.899 (10)2.016 (13)2.888 (3)163 (3)
Symmetry codes: (i) x+1, y, z; (ii) x−1, y, z.
Acknowledgements top

This project was supported by a research grant from Dalian Medical University.

references
References top

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