supplementary materials


fj2113 scheme

Acta Cryst. (2008). E64, m681-m682    [ doi:10.1107/S1600536808010349 ]

Hydroxonium triaquabis(biuret-[kappa]2O,O')dichloridolanthanum(III) dichloride dihydrate

W. T. A. Harrison

Abstract top

In the title compound, (H3O)[LaCl2(C2H5N3O2)2(H2O)3]Cl2·2H2O, the La atom is bonded to seven O atoms (arising from two O,O'-bidentate biuret molecules and three water molecules) and two chloride ions in an irregular arrangement. A network of N-H...O, N-H...Cl, O-H...O and O-H...Cl hydrogen bonds helps to establish the packing, leading to a three-dimensional network. The La atom, one Cl atom and four O atoms lie on a crystallographic mirror plane.

Comment top

No complexes of lanthanum(III) with biuret (biur), H2N—CO—NH—CO—NH2 (or C2H5N3O2) have been structurally characterized. The structures of two samarium-biuret complexes, Sm(biur)4.(NO3)3 (Haddad, 1987) and Sm(biur)4.(ClO4)3 (Haddad, 1988) have been described. In both cases, an SmO8 square antiprismatic coordination arises for the metal ion. Based on X-ray photographs, it was suggested that all the Ln(biur)4.(NO3)3 and Ln(biur)4.(ClO4)3 compounds are isostructural with their samarium prototypes. In this paper, we describe the synthesis and structure of the title compound, (I), in which three different ligands are bonded to the trivalent cation.

Compound (I) is an ionic salt containing a new [La(biur)2(H2O)5Cl2]+ complex ion. The complete cation is generated by crystallographic mirror symmetry, with La and the three water O atoms lying on the reflecting plane. A hydroxonium cation (with its O6 atom with site symmetry m), an uncoordinated chloride ion (Cl2) and an uncoordinated water molecule (O7) complete the structure (Fig. 1) of (I).

The resulting LaO7Cl2 polyhedral geometry in (I) (Table 1) can only be described as irregular. The Brese & O'Keeffe (1991) bond-valence sum for La1 in (I) of 3.29 is significantly larger than the expected value of 3.00. A local LaO7Cl2 grouping has been seen in various other compounds, including [LaCl2(H2O)(C12H24O6)]+.Cl- (Rogers et al., 1993) and [La(H2O)4Cl(C3H7O3]2+.2Cl-.H2O (Su et al., 2006), but otherwise these phases have no similarity to (I).

The O,O-bidenate coordination of the biuret molecule to the lanthanum ion in (I) results in a six-membered chelate ring that is non-planar. As noted previously (Carugo et al., 1992), the biuret molecule can be regarded as two planar amide fragments linked by the NH bridge. Here, the dihedral angle betwen the N1/C1/O1/N2 and N2/C2/O2/N3 units is 5.06 (10)°. The lanthanum cation deviates from the N1/C1/O1/N2 and N2/C2/O2/N3 mean planes by 0.894 (4)Å and 0.606 (4) Å, respectively.

The component species in (I) are linked by a dense array of N—H···O, N—H···Cl, O—H···Cl and O—H···O hydrogen bonds (Table 2) resulting in a three-dimensional network. Of note are the [001] chains resulting from the O—H···O hydrogen bonds involving the complex cation, H3O6 and H2O7 (Fig. 2).

The structure of (I) is different to those of the recently reported (Harrison, 2008a,b) M(biur)2(H2)4.Cl3 (M = Gd, Y) phases, perhaps because the larger La3+ cation can accommodate nine atoms in its coordination sphere.

Related literature top

For related structures, see: Carugo et al. (1992); Rogers et al. (1993); Su et al. (2006); Haddad (1987, 1988); Harrison (2008a,b)

For related literature, see: Brese & O'Keeffe (1991).

Experimental top

0.1 M Aqueous solutions of LaCl3 (10 ml) and biuret (10 ml) were mixed and a small quantity of dilute hydrochloric acid was added, to result in a colourless solution. Colourless blocks of (I) grew over several days as the water slowly evaporated.

Refinement top

The N-bound hydrogen atoms were geometrically placed (N—H = 0.88 Å) and refined as riding with Uiso(H) = 1.2Ueq(N). The water and hydroxonium H atoms were located in difference maps and refined as riding in their as-found relative positions with Uiso(H) = 1.2Ueq(O). Although a plausible hydrogen bonding scheme results, some of the peaks were barely above the noise level of the data, and thus the positions of the O-bonded H atoms should be regarded as less certain.

Computing details top

Data collection: SMART (Bruker, 1999); cell refinement: SAINT (Bruker, 1999); data reduction: SAINT (Bruker, 1999); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).

Figures top
[Figure 1] Fig. 1. View of the molecular structure of (I) showing 50% displacement ellipsoids (arbitrary spheres for the H atoms). Symmetry code: (i) -x, y, z.
[Figure 2] Fig. 2. Fragment of the packing for (I) displaying the hydrogen bonds (shows an double dashed lines) leading to chains arising from the complex cation, the hydroxonium ion and the uncoordinated water molecule. Symmetry code: (i) 1/2 - x, 1/2 + y, z.
Hydroxonium triaquabis(biuret-κ2O,O')dichloridolanthanum(III) dichloride dihydrate top
Crystal data top
(H3O)[LaCl2(C2H5N3O2)2(H2O)3]Cl2·2H2OF000 = 1176
Mr = 596.00Dx = 1.913 Mg m3
Orthorhombic, Cmc21Mo Kα radiation
λ = 0.71073 Å
Hall symbol: C 2c -2Cell parameters from 4771 reflections
a = 17.6252 (7) Åθ = 2.3–32.5º
b = 6.8868 (3) ŵ = 2.63 mm1
c = 17.0447 (7) ÅT = 293 (2) K
V = 2068.91 (15) Å3Block, colourless
Z = 40.30 × 0.23 × 0.17 mm
Data collection top
Bruker SMART1000 CCD
diffractometer
3793 independent reflections
Radiation source: fine-focus sealed tube3716 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.018
T = 293(2) Kθmax = 32.5º
ω scansθmin = 2.3º
Absorption correction: multi-scan
(SADABS; Bruker, 1999)
h = 26→26
Tmin = 0.486, Tmax = 0.636k = 10→9
11912 measured reflectionsl = 24→25
Refinement top
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.016  w = 1/[σ2(Fo2) + (0.0242P)2]
where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.042(Δ/σ)max < 0.001
S = 1.09Δρmax = 0.70 e Å3
3793 reflectionsΔρmin = 0.67 e Å3
121 parametersExtinction correction: none
1 restraintAbsolute structure: Flack (1983), 1805 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.001 (9)
Secondary atom site location: difference Fourier map
Crystal data top
(H3O)[LaCl2(C2H5N3O2)2(H2O)3]Cl2·2H2OV = 2068.91 (15) Å3
Mr = 596.00Z = 4
Orthorhombic, Cmc21Mo Kα
a = 17.6252 (7) ŵ = 2.63 mm1
b = 6.8868 (3) ÅT = 293 (2) K
c = 17.0447 (7) Å0.30 × 0.23 × 0.17 mm
Data collection top
Bruker SMART1000 CCD
diffractometer
3793 independent reflections
Absorption correction: multi-scan
(SADABS; Bruker, 1999)
3716 reflections with I > 2σ(I)
Tmin = 0.486, Tmax = 0.636Rint = 0.018
11912 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.016H-atom parameters constrained
wR(F2) = 0.042Δρmax = 0.70 e Å3
S = 1.09Δρmin = 0.67 e Å3
3793 reflectionsAbsolute structure: Flack (1983), 1805 Friedel pairs
121 parametersFlack parameter: 0.001 (9)
1 restraint
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
La10.00000.234447 (14)0.341713 (14)0.01947 (3)
Cl10.10789 (2)0.09170 (6)0.32281 (3)0.03634 (12)
C10.18755 (10)0.3315 (3)0.40149 (12)0.0293 (4)
C20.17044 (10)0.4278 (3)0.26382 (12)0.0290 (3)
N10.24102 (12)0.2964 (3)0.45518 (14)0.0459 (5)
H10.22830.26500.50220.055*
H20.28820.30520.44270.055*
N20.21433 (7)0.3826 (2)0.32868 (11)0.0344 (4)
H30.26280.38700.32290.041*
N30.20884 (11)0.4877 (3)0.20138 (13)0.0445 (4)
H40.18510.51810.15910.053*
H50.25750.49630.20320.053*
O10.11900 (8)0.3202 (3)0.41736 (8)0.0333 (3)
O20.10047 (7)0.41314 (19)0.26393 (8)0.0298 (3)
O30.00000.0881 (4)0.47616 (14)0.0488 (7)
H60.04060.07290.50260.059*
O40.00000.1452 (4)0.19698 (13)0.0384 (5)
H70.03770.09350.17500.046*
O50.00000.5850 (3)0.39200 (13)0.0388 (5)
H80.03230.65270.38430.047*
Cl20.36579 (3)0.51610 (15)0.08766 (5)0.04627 (14)
O60.50000.1924 (5)0.17243 (18)0.0617 (7)
H90.46860.14720.20810.074*
H100.50000.13630.12730.074*
O70.39583 (14)0.0187 (4)0.06811 (12)0.0695 (6)
H110.39600.14040.05600.083*
H120.39760.04760.02650.083*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
La10.01375 (4)0.02565 (5)0.01902 (5)0.0000.0000.00102 (8)
Cl10.01972 (15)0.03484 (19)0.0545 (3)0.00363 (13)0.00053 (17)0.00126 (18)
C10.0219 (8)0.0309 (9)0.0351 (9)0.0001 (6)0.0063 (7)0.0041 (7)
C20.0240 (7)0.0303 (8)0.0325 (9)0.0042 (6)0.0059 (7)0.0006 (7)
N10.0305 (9)0.0593 (11)0.0479 (11)0.0024 (8)0.0163 (9)0.0009 (10)
N20.0164 (5)0.0455 (7)0.0412 (11)0.0021 (5)0.0022 (6)0.0039 (7)
N30.0322 (9)0.0584 (11)0.0430 (10)0.0067 (8)0.0141 (8)0.0071 (9)
O10.0228 (6)0.0510 (8)0.0260 (6)0.0028 (6)0.0025 (5)0.0012 (6)
O20.0211 (6)0.0395 (7)0.0288 (6)0.0032 (5)0.0006 (5)0.0062 (6)
O30.0248 (10)0.086 (2)0.0352 (13)0.0000.0000.0282 (12)
O40.0265 (10)0.0609 (15)0.0279 (10)0.0000.0000.0113 (10)
O50.0301 (10)0.0299 (9)0.0564 (14)0.0000.0000.0004 (9)
Cl20.03018 (19)0.0726 (4)0.0360 (2)0.0037 (3)0.0008 (3)0.0124 (2)
O60.076 (2)0.0640 (16)0.0453 (16)0.0000.0000.0068 (14)
O70.0972 (16)0.0730 (12)0.0384 (10)0.0050 (13)0.0051 (10)0.0115 (10)
Geometric parameters (Å, °) top
La1—O32.503 (2)C2—N21.385 (3)
La1—O22.5313 (13)N1—H10.8600
La1—O2i2.5313 (12)N1—H20.8600
La1—O12.5318 (14)N2—H30.8600
La1—O1i2.5318 (14)N3—H40.8600
La1—O42.542 (2)N3—H50.8600
La1—O52.562 (2)O3—H60.8522
La1—Cl1i2.9606 (4)O4—H70.8418
La1—Cl12.9606 (4)O5—H80.7477
C1—O11.241 (2)O6—H90.8786
C1—N11.336 (3)O6—H100.8615
C1—N21.374 (3)O7—H110.8631
C2—O21.237 (2)O7—H120.8446
C2—N31.327 (3)
O3—La1—O2132.46 (4)O2—La1—Cl182.10 (3)
O3—La1—O2i132.46 (4)O2i—La1—Cl1139.57 (4)
O2—La1—O2i88.78 (6)O1—La1—Cl172.56 (4)
O3—La1—O168.14 (5)O1i—La1—Cl1139.86 (4)
O2—La1—O164.78 (4)O4—La1—Cl173.20 (5)
O2i—La1—O1137.12 (5)O5—La1—Cl1138.709 (15)
O3—La1—O1i68.14 (5)Cl1i—La1—Cl179.930 (17)
O2—La1—O1i137.12 (5)O1—C1—N1121.8 (2)
O2i—La1—O1i64.78 (4)O1—C1—N2123.21 (16)
O1—La1—O1i111.87 (7)N1—C1—N2115.01 (18)
O3—La1—O4142.27 (9)O2—C2—N3122.33 (19)
O2—La1—O467.01 (5)O2—C2—N2122.51 (17)
O2i—La1—O467.01 (5)N3—C2—N2115.16 (17)
O1—La1—O4123.41 (3)C1—N1—H1120.0
O1i—La1—O4123.41 (3)C1—N1—H2120.0
O3—La1—O594.19 (9)H1—N1—H2120.0
O2—La1—O573.56 (5)C1—N2—C2125.93 (14)
O2i—La1—O573.56 (5)C1—N2—H3117.0
O1—La1—O567.03 (4)C2—N2—H3117.0
O1i—La1—O567.03 (4)C2—N3—H4120.0
O4—La1—O5123.54 (8)C2—N3—H5120.0
O3—La1—Cl1i78.13 (5)H4—N3—H5120.0
O2—La1—Cl1i139.57 (4)C1—O1—La1135.26 (12)
O2i—La1—Cl1i82.10 (3)C2—O2—La1137.53 (12)
O1—La1—Cl1i139.86 (4)La1—O3—H6122.3
O1i—La1—Cl1i72.56 (4)La1—O4—H7122.3
O4—La1—Cl1i73.20 (5)La1—O5—H8121.9
O5—La1—Cl1i138.709 (15)H9—O6—H10117.3
O3—La1—Cl178.13 (5)H11—O7—H12108.9
O1—C1—N2—C20.1 (3)Cl1i—La1—O1—C1103.6 (2)
N1—C1—N2—C2179.32 (19)Cl1—La1—O1—C154.6 (2)
O2—C2—N2—C15.1 (3)N3—C2—O2—La1159.25 (15)
N3—C2—N2—C1174.93 (19)N2—C2—O2—La120.7 (3)
N1—C1—O1—La1149.81 (17)O3—La1—O2—C221.4 (2)
N2—C1—O1—La131.0 (3)O2i—La1—O2—C2175.02 (16)
O3—La1—O1—C1138.5 (2)O1—La1—O2—C229.91 (18)
O2—La1—O1—C134.7 (2)O1i—La1—O2—C2125.52 (18)
O2i—La1—O1—C191.9 (2)O4—La1—O2—C2119.5 (2)
O1i—La1—O1—C1167.88 (17)O5—La1—O2—C2101.81 (19)
O4—La1—O1—C10.6 (2)Cl1i—La1—O2—C2108.69 (18)
O5—La1—O1—C1116.7 (2)Cl1—La1—O2—C244.48 (18)
Symmetry codes: (i) −x, y, z.
Hydrogen-bond geometry (Å, °) top
D—H···AD—HH···AD···AD—H···A
N1—H1···Cl2ii0.862.943.643 (3)141
N1—H2···Cl1iii0.862.833.574 (3)145
N2—H3···Cl1iii0.862.283.1399 (14)173
N3—H4···O7iii0.862.122.927 (3)156
N3—H5···Cl20.862.753.3835 (18)132
O3—H6···Cl2ii0.852.283.1181 (16)168
O4—H7···Cl2iv0.842.323.1396 (17)164
O5—H8···Cl1v0.752.443.1566 (17)160
O6—H9···O2iv0.882.233.044 (3)153
O6—H10···O70.862.352.941 (3)126
O6—H10···O7vi0.862.352.941 (3)126
O7—H11···Cl2vii0.862.483.264 (3)151
O7—H12···O1viii0.842.092.922 (2)168
Symmetry codes: (ii) −x+1/2, −y+1/2, z+1/2; (iii) −x+1/2, y+1/2, z; (iv) −x+1/2, y−1/2, z; (v) −x, y+1, z; (vi) −x+1, y, z; (vii) x, y−1, z; (viii) −x+1/2, −y+1/2, z−1/2.
Table 1
Selected geometric parameters (Å)
top
La1—O32.503 (2)La1—O42.542 (2)
La1—O22.5313 (13)La1—O52.562 (2)
La1—O12.5318 (14)La1—Cl12.9606 (4)
Table 2
Hydrogen-bond geometry (Å, °)
top
D—H···AD—HH···AD···AD—H···A
N1—H1···Cl2i0.862.943.643 (3)141
N1—H2···Cl1ii0.862.833.574 (3)145
N2—H3···Cl1ii0.862.283.1399 (14)173
N3—H4···O7ii0.862.122.927 (3)156
N3—H5···Cl20.862.753.3835 (18)132
O3—H6···Cl2i0.852.283.1181 (16)168
O4—H7···Cl2iii0.842.323.1396 (17)164
O5—H8···Cl1iv0.752.443.1566 (17)160
O6—H9···O2iii0.882.233.044 (3)153
O6—H10···O70.862.352.941 (3)126
O6—H10···O7v0.862.352.941 (3)126
O7—H11···Cl2vi0.862.483.264 (3)151
O7—H12···O1vii0.842.092.922 (2)168
Symmetry codes: (i) −x+1/2, −y+1/2, z+1/2; (ii) −x+1/2, y+1/2, z; (iii) −x+1/2, y−1/2, z; (iv) −x, y+1, z; (v) −x+1, y, z; (vi) x, y−1, z; (vii) −x+1/2, −y+1/2, z−1/2.
references
References top

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