supplementary materials
2,4-Dihydroxybenzaldehyde 4-methylthiosemicarbazone
4-Methylthiosemicarbazide (0.11 g, 1 mmol) and 2,4-dihydroxybenzaldehyde (0.14 g, 1 mmol) were heated in ethanol (10 ml) for 1 h. Slow evaporation of
the solvent yielded yellow crystals.
Carbon-bound H-atoms were placed in calculated positions (C—H 0.95 to 0.98 Å) and were included in the refinement in the riding model approximation,
with Uiso>(H) set to 1.2-1.5 Ueq(C).
The hydroxy and amino H-atoms were located in a difference Fourier map, and
were refined with distance retraints
of O–H = 0.84±0.01 and N–H = 0.88±0.01 Å; their temperature factors were
freely refined.
Data collection: APEX2 (Bruker, 2007); cell refinement: SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2008).
2,4-Dihydroxybenzaldehyde 4-methylthiosemicarbazone
top
Crystal data top
| C9H11N3O2S | F(000) = 472 |
| Mr = 225.27 | Dx = 1.521 Mg m−3 |
| Monoclinic, Cc | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: C -2yc | Cell parameters from 1090 reflections |
| a = 18.0046 (6) Å | θ = 2.4–24.9° |
| b = 4.6436 (1) Å | µ = 0.31 mm−1 |
| c = 12.2842 (4) Å | T = 100 K |
| β = 106.695 (2)° | Prims, yellow |
| V = 983.74 (5) Å3 | 0.09 × 0.06 × 0.03 mm |
| Z = 4 | |
Data collection top
Bruker SMART APEX diffractometer | 2128 independent reflections |
| Radiation source: fine-focus sealed tube | 1925 reflections with I > 2σ(I) |
| graphite | Rint = 0.034 |
| ω scans | θmax = 27.5°, θmin = 2.4° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −23→22 |
| Tmin = 0.973, Tmax = 0.991 | k = −6→6 |
| 4390 measured reflections | l = −15→15 |
Refinement top
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| R[F2 > 2σ(F2)] = 0.038 | H atoms treated by a mixture of independent and constrained refinement |
| wR(F2) = 0.109 | w = 1/[σ2(Fo2) + (0.0598P)2] where P = (Fo2 + 2Fc2)/3 |
| S = 1.11 | (Δ/σ)max = 0.001 |
| 2128 reflections | Δρmax = 0.31 e Å−3 |
| 153 parameters | Δρmin = −0.22 e Å−3 |
| 6 restraints | Absolute structure: Flack (1983), 814 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.00 (1) |
Crystal data top
| C9H11N3O2S | V = 983.74 (5) Å3 |
| Mr = 225.27 | Z = 4 |
| Monoclinic, Cc | Mo Kα radiation |
| a = 18.0046 (6) Å | µ = 0.31 mm−1 |
| b = 4.6436 (1) Å | T = 100 K |
| c = 12.2842 (4) Å | 0.09 × 0.06 × 0.03 mm |
| β = 106.695 (2)° | |
Data collection top
Bruker SMART APEX diffractometer | 2128 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1925 reflections with I > 2σ(I) |
| Tmin = 0.973, Tmax = 0.991 | Rint = 0.034 |
| 4390 measured reflections | θmax = 27.5° |
Refinement top
| R[F2 > 2σ(F2)] = 0.038 | H atoms treated by a mixture of independent and constrained refinement |
| wR(F2) = 0.109 | Δρmax = 0.31 e Å−3 |
| S = 1.11 | Δρmin = −0.22 e Å−3 |
| 2128 reflections | Absolute structure: Flack (1983), 814 Friedel pairs |
| 153 parameters | Flack parameter: 0.00 (1) |
| 6 restraints | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top| | x | y | z | Uiso*/Ueq | |
| S1 | 0.50003 (5) | 0.63599 (16) | 0.50001 (6) | 0.01776 (19) | |
| O1 | 0.65168 (12) | −0.1181 (5) | 0.93136 (19) | 0.0174 (5) | |
| O2 | 0.84529 (13) | −0.8242 (5) | 1.05294 (19) | 0.0198 (5) | |
| N1 | 0.63927 (15) | 0.1424 (5) | 0.7309 (2) | 0.0144 (5) | |
| N2 | 0.60440 (15) | 0.2962 (6) | 0.6322 (2) | 0.0147 (5) | |
| N3 | 0.53164 (15) | 0.5567 (6) | 0.7241 (2) | 0.0166 (6) | |
| C1 | 0.73692 (17) | −0.2114 (7) | 0.8141 (2) | 0.0128 (6) | |
| C2 | 0.71210 (17) | −0.2660 (7) | 0.9113 (2) | 0.0122 (6) | |
| C3 | 0.74812 (18) | −0.4725 (7) | 0.9891 (3) | 0.0141 (6) | |
| H3 | 0.7300 | −0.5117 | 1.0530 | 0.017* | |
| C4 | 0.81112 (16) | −0.6232 (6) | 0.9739 (2) | 0.0142 (6) | |
| C5 | 0.83798 (18) | −0.5674 (7) | 0.8800 (3) | 0.0174 (7) | |
| H5 | 0.8815 | −0.6688 | 0.8704 | 0.021* | |
| C6 | 0.80096 (17) | −0.3645 (7) | 0.8017 (3) | 0.0159 (7) | |
| H6 | 0.8192 | −0.3274 | 0.7378 | 0.019* | |
| C7 | 0.69685 (17) | −0.0131 (7) | 0.7250 (2) | 0.0142 (6) | |
| H7 | 0.7142 | 0.0020 | 0.6590 | 0.017* | |
| C8 | 0.54711 (17) | 0.4887 (7) | 0.6279 (3) | 0.0149 (6) | |
| C9 | 0.47552 (19) | 0.7743 (8) | 0.7317 (3) | 0.0206 (7) | |
| H9A | 0.4879 | 0.8460 | 0.8099 | 0.031* | |
| H9B | 0.4234 | 0.6899 | 0.7100 | 0.031* | |
| H9C | 0.4773 | 0.9340 | 0.6804 | 0.031* | |
| H1O | 0.633 (3) | −0.017 (11) | 0.874 (3) | 0.08 (2)* | |
| H2O | 0.8796 (19) | −0.909 (8) | 1.032 (4) | 0.038 (13)* | |
| H2N | 0.6097 (19) | 0.218 (7) | 0.5703 (17) | 0.011 (8)* | |
| H3N | 0.5552 (19) | 0.476 (7) | 0.7898 (17) | 0.018 (9)* | |
Atomic displacement parameters (Å2) top| | U11 | U22 | U33 | U12 | U13 | U23 |
| S1 | 0.0196 (4) | 0.0180 (4) | 0.0138 (3) | 0.0027 (4) | 0.0018 (3) | 0.0021 (4) |
| O1 | 0.0193 (13) | 0.0174 (12) | 0.0159 (11) | 0.0038 (9) | 0.0059 (9) | 0.0029 (10) |
| O2 | 0.0216 (12) | 0.0196 (13) | 0.0171 (12) | 0.0069 (10) | 0.0037 (9) | 0.0040 (9) |
| N1 | 0.0159 (13) | 0.0126 (13) | 0.0125 (12) | −0.0018 (11) | 0.0008 (10) | 0.0013 (10) |
| N2 | 0.0176 (13) | 0.0163 (13) | 0.0097 (13) | 0.0024 (11) | 0.0030 (10) | −0.0001 (11) |
| N3 | 0.0195 (14) | 0.0144 (13) | 0.0152 (13) | 0.0023 (11) | 0.0037 (10) | 0.0014 (10) |
| C1 | 0.0153 (14) | 0.0135 (15) | 0.0103 (14) | −0.0029 (12) | 0.0048 (11) | −0.0005 (12) |
| C2 | 0.0105 (14) | 0.0147 (15) | 0.0129 (15) | −0.0017 (12) | 0.0056 (11) | −0.0034 (12) |
| C3 | 0.0162 (15) | 0.0159 (16) | 0.0120 (15) | −0.0032 (12) | 0.0069 (12) | −0.0012 (11) |
| C4 | 0.0148 (16) | 0.0139 (14) | 0.0113 (14) | −0.0007 (12) | −0.0006 (12) | 0.0000 (12) |
| C5 | 0.0155 (16) | 0.0163 (16) | 0.0180 (17) | 0.0012 (12) | 0.0010 (12) | −0.0031 (12) |
| C6 | 0.0121 (15) | 0.0214 (18) | 0.0134 (15) | −0.0031 (14) | 0.0023 (12) | −0.0033 (13) |
| C7 | 0.0157 (16) | 0.0164 (16) | 0.0117 (15) | −0.0035 (13) | 0.0058 (12) | −0.0016 (12) |
| C8 | 0.0154 (15) | 0.0127 (15) | 0.0175 (16) | −0.0031 (12) | 0.0064 (12) | 0.0002 (12) |
| C9 | 0.0169 (16) | 0.0266 (19) | 0.0201 (17) | 0.0003 (13) | 0.0079 (13) | −0.0038 (13) |
Geometric parameters (Å, °) top
| S1—C8 | 1.699 (3) | C1—C2 | 1.413 (4) |
| O1—C2 | 1.367 (4) | C1—C7 | 1.454 (4) |
| O1—H1O | 0.838 (10) | C2—C3 | 1.378 (4) |
| O2—C4 | 1.360 (4) | C3—C4 | 1.391 (4) |
| O2—H2O | 0.836 (10) | C3—H3 | 0.9500 |
| N1—C7 | 1.283 (4) | C4—C5 | 1.397 (4) |
| N1—N2 | 1.392 (3) | C5—C6 | 1.374 (4) |
| N2—C8 | 1.354 (4) | C5—H5 | 0.9500 |
| N2—H2N | 0.871 (10) | C6—H6 | 0.9500 |
| N3—C8 | 1.328 (4) | C7—H7 | 0.9500 |
| N3—C9 | 1.451 (4) | C9—H9A | 0.9800 |
| N3—H3N | 0.880 (10) | C9—H9B | 0.9800 |
| C1—C6 | 1.400 (4) | C9—H9C | 0.9800 |
| | | |
| C2—O1—H1O | 106 (4) | C3—C4—C5 | 120.5 (3) |
| C4—O2—H2O | 109 (3) | C6—C5—C4 | 119.5 (3) |
| C7—N1—N2 | 114.1 (3) | C6—C5—H5 | 120.3 |
| C8—N2—N1 | 121.4 (3) | C4—C5—H5 | 120.3 |
| C8—N2—H2N | 121 (2) | C5—C6—C1 | 121.4 (3) |
| N1—N2—H2N | 114 (2) | C5—C6—H6 | 119.3 |
| C8—N3—C9 | 123.4 (3) | C1—C6—H6 | 119.3 |
| C8—N3—H3N | 123 (3) | N1—C7—C1 | 123.2 (3) |
| C9—N3—H3N | 114 (3) | N1—C7—H7 | 118.4 |
| C6—C1—C2 | 118.1 (3) | C1—C7—H7 | 118.4 |
| C6—C1—C7 | 119.1 (3) | N3—C8—N2 | 118.3 (3) |
| C2—C1—C7 | 122.8 (3) | N3—C8—S1 | 123.4 (2) |
| O1—C2—C3 | 117.7 (3) | N2—C8—S1 | 118.3 (2) |
| O1—C2—C1 | 121.6 (3) | N3—C9—H9A | 109.5 |
| C3—C2—C1 | 120.8 (3) | N3—C9—H9B | 109.5 |
| C2—C3—C4 | 119.8 (3) | H9A—C9—H9B | 109.5 |
| C2—C3—H3 | 120.1 | N3—C9—H9C | 109.5 |
| C4—C3—H3 | 120.1 | H9A—C9—H9C | 109.5 |
| O2—C4—C3 | 117.9 (3) | H9B—C9—H9C | 109.5 |
| O2—C4—C5 | 121.6 (3) | | |
| | | |
| C7—N1—N2—C8 | −174.4 (3) | C4—C5—C6—C1 | 0.2 (5) |
| C6—C1—C2—O1 | 177.7 (3) | C2—C1—C6—C5 | 1.4 (4) |
| C7—C1—C2—O1 | −4.9 (4) | C7—C1—C6—C5 | −176.0 (3) |
| C6—C1—C2—C3 | −2.5 (4) | N2—N1—C7—C1 | −174.0 (3) |
| C7—C1—C2—C3 | 174.8 (3) | C6—C1—C7—N1 | −177.7 (3) |
| O1—C2—C3—C4 | −178.3 (3) | C2—C1—C7—N1 | 5.0 (5) |
| C1—C2—C3—C4 | 1.9 (5) | C9—N3—C8—N2 | 175.6 (3) |
| C2—C3—C4—O2 | 179.7 (3) | C9—N3—C8—S1 | −3.1 (4) |
| C2—C3—C4—C5 | −0.2 (5) | N1—N2—C8—N3 | 8.8 (4) |
| O2—C4—C5—C6 | 179.3 (3) | N1—N2—C8—S1 | −172.5 (2) |
| C3—C4—C5—C6 | −0.9 (5) | | |
Hydrogen-bond geometry (Å, °) top
| D—H···A | D—H | H···A | D···A | D—H···A |
| O1—H1O···N1 | 0.84 (1) | 1.93 (3) | 2.694 (3) | 151 (6) |
| O2—H2O···S1i | 0.84 (1) | 2.54 (1) | 3.365 (2) | 170 (4) |
| N2—H2N···O1ii | 0.87 (1) | 2.11 (1) | 2.950 (4) | 162 (3) |
| Symmetry codes: (i) x+1/2, −y−1/2, z+1/2; (ii) x, −y, z−1/2. |
Table 1
Hydrogen-bond geometry (Å, °) top
| D—H···A | D—H | H···A | D···A | D—H···A |
| O1—H1O···N1 | 0.84 (1) | 1.93 (3) | 2.694 (3) | 151 (6) |
| O2—H2O···S1i | 0.84 (1) | 2.54 (1) | 3.365 (2) | 170 (4) |
| N2—H2N···O1ii | 0.87 (1) | 2.11 (1) | 2.950 (4) | 162 (3) |
| Symmetry codes: (i) x+1/2, −y−1/2, z+1/2; (ii) x, −y, z−1/2. |
We thank the University of Malaya (PJP FS316/2008 C) for supporting this study.
KWT thanks the Ministry of Higher Education for a SLAI scholarship.
Barbour, L. J. (2001). J. Supramol. Chem. 1, 189–191.
Bruker (2007). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA.
Flack, H. D. (1983). Acta Cryst. A39, 876–881.
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany.
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122.
Tan, K. W., Ng, C. H., Maah, M. J. & Ng, S. W. (2008). Acta Cryst. E64, o1344.
Westrip, S. P. (2008). publCIF. In preparation.
In continuation of on-going studies into the structural chemistry of thiosemicarbazones (Tan et al., 2008), the title compound (I) was investigated. Molecule (I), Fig. 1, is essentially planar and is consolidated into a 2-D array by a combination of N-H···O and O-H···S hydrogen bonding contacts, Table 1.