metal-organic compounds
Cyclopentyldiphenyl(4-thiosemicarbazonopentanoato-κO)tin(IV)
aDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: seikweng@um.edu.my
The Sn atom in the title compound, [Sn(C5H9)(C6H5)2(C6H10N3O2S)], exists within a tetrahedral geometry. The –NH2 group forms a weak hydrogen bond across a center of inversion to the S atom of an adjacent molecule, as well as another weaker hydrogen (across another center of inversion) to the Sn-bound O atom of another molecule. The hydrogen-bonded layer structure is consolidated by a strong hydrogen bond between the –NH– group and the uncoordinated O atom of a third molecule.
Related literature
For the antibacterial and antifungal applications of cyclopentyldiphenyltin carboxylates, see: Koshy et al. (2001). For the crystal structures of cyclopentyldiphenyltin derivatives, see: Lo & Ng (2004); Lo et al. (1999); Teo et al. (2004). For the synthesis of levulinic acid thiosemicarbazone, see: Ng (1992). For a review of the structural chemistry of organotin carboxylates, see: Tiekink (1991, 1994).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2008).
Supporting information
10.1107/S1600536808011112/tk2255sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808011112/tk2255Isup2.hkl
Levulinic acid thiosemicarbazone was synthesized from the reaction of levulinic acid and thiosemicarbazide (Ng, 1992). Cyclopentyldiphenyltin hydroxide was sythesized by using a multistep reaction, starting from the Grignard reaction of cyclopentylmagnesium bromide on triphenyltin chloride. One phenyl radical was then cleaved by iodine in DMF; the resulting iodide was then hydrolyzed with sodium hydroxide in acetone to give the mixed triorganotin hydroxide (Lo et al., 1999). The thiosemicarbazone (1.1 g, 5 mmol) and triorganotin hydroxide (2 g, 5 mmol) were dissolved in hot ethanol (50 ml). The clear solution was filtered and colorless crystals separated from the cool solution after a day (yield: 75%).
Carbon-bound H-atoms were placed in calculated positions (C—H 0.95 to 0.99 Å) and were included in the
in the riding model approximation, with U(H) set to 1.2 to 1.5U(C). The nitrogen-bound H-atom were similarly generated (N–H 0.88±0.01 Å) and their temperature factors similarly tied.The final difference Fourier map had a large peak at 1.4 Å from C1 but was otherwise diffuse.
Data collection: APEX2 (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2008).Fig. 1. 70% Probability thermal ellipsoid plot of Sn(C5H9)(C6H5)2(C12H15N3O2S), (I), show atom-numbering scheme. Hydrogen atoms are drawn as spheres of arbitrary radius. |
[Sn(C5H9)(C6H5)2(C6H10N3O2S)] | Z = 2 |
Mr = 530.24 | F(000) = 540 |
Triclinic, P1 | Dx = 1.503 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 9.5780 (1) Å | Cell parameters from 9905 reflections |
b = 10.2375 (1) Å | θ = 2.4–28.3° |
c = 13.4205 (1) Å | µ = 1.20 mm−1 |
α = 86.901 (1)° | T = 100 K |
β = 83.370 (1)° | Irregular block, colorless |
γ = 63.667 (1)° | 0.30 × 0.15 × 0.10 mm |
V = 1171.50 (2) Å3 |
Bruker SMART APEXII diffractometer | 5350 independent reflections |
Radiation source: fine-focus sealed tube | 5186 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.014 |
ω scans | θmax = 27.5°, θmin = 1.5° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −9→12 |
Tmin = 0.779, Tmax = 0.889 | k = −13→13 |
15020 measured reflections | l = −17→17 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.028 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.078 | H-atom parameters constrained |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0431P)2 + 2.3757P] where P = (Fo2 + 2Fc2)/3 |
5350 reflections | (Δ/σ)max < 0.001 |
272 parameters | Δρmax = 1.99 e Å−3 |
0 restraints | Δρmin = −0.91 e Å−3 |
[Sn(C5H9)(C6H5)2(C6H10N3O2S)] | γ = 63.667 (1)° |
Mr = 530.24 | V = 1171.50 (2) Å3 |
Triclinic, P1 | Z = 2 |
a = 9.5780 (1) Å | Mo Kα radiation |
b = 10.2375 (1) Å | µ = 1.20 mm−1 |
c = 13.4205 (1) Å | T = 100 K |
α = 86.901 (1)° | 0.30 × 0.15 × 0.10 mm |
β = 83.370 (1)° |
Bruker SMART APEXII diffractometer | 5350 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 5186 reflections with I > 2σ(I) |
Tmin = 0.779, Tmax = 0.889 | Rint = 0.014 |
15020 measured reflections |
R[F2 > 2σ(F2)] = 0.028 | 0 restraints |
wR(F2) = 0.078 | H-atom parameters constrained |
S = 1.03 | Δρmax = 1.99 e Å−3 |
5350 reflections | Δρmin = −0.91 e Å−3 |
272 parameters |
x | y | z | Uiso*/Ueq | ||
Sn1 | 0.400900 (17) | 0.628156 (16) | 0.232609 (11) | 0.01648 (6) | |
S1 | 0.24404 (7) | 0.05406 (6) | 0.56139 (5) | 0.02291 (13) | |
O1 | 0.4075 (2) | 0.63541 (19) | 0.38521 (13) | 0.0191 (3) | |
O2 | 0.1648 (2) | 0.66366 (19) | 0.38475 (13) | 0.0188 (3) | |
N1 | 0.1747 (2) | 0.4584 (2) | 0.57946 (15) | 0.0161 (4) | |
N2 | 0.1483 (2) | 0.3354 (2) | 0.58783 (15) | 0.0160 (4) | |
H2N | 0.0552 | 0.3410 | 0.6087 | 0.019* | |
N3 | 0.4100 (2) | 0.2066 (2) | 0.54086 (17) | 0.0215 (4) | |
H3N1 | 0.4187 | 0.2883 | 0.5433 | 0.026* | |
H3N2 | 0.4933 | 0.1248 | 0.5240 | 0.026* | |
C1 | 0.2123 (3) | 0.8151 (3) | 0.1783 (2) | 0.0269 (5) | |
H1 | 0.1189 | 0.7944 | 0.1863 | 0.032* | |
C2 | 0.2415 (5) | 0.8439 (5) | 0.0673 (3) | 0.0712 (16) | |
H2A | 0.1932 | 0.8001 | 0.0267 | 0.085* | |
H2B | 0.3553 | 0.8010 | 0.0460 | 0.085* | |
C3 | 0.1675 (4) | 1.0097 (4) | 0.0531 (2) | 0.0359 (7) | |
H3A | 0.2491 | 1.0442 | 0.0376 | 0.043* | |
H3B | 0.0987 | 1.0397 | −0.0019 | 0.043* | |
C4 | 0.0732 (5) | 1.0696 (4) | 0.1530 (3) | 0.0495 (9) | |
H4A | −0.0343 | 1.0788 | 0.1542 | 0.059* | |
H4B | 0.0672 | 1.1663 | 0.1663 | 0.059* | |
C5 | 0.1651 (4) | 0.9556 (3) | 0.2307 (3) | 0.0398 (7) | |
H5A | 0.2577 | 0.9674 | 0.2456 | 0.048* | |
H5B | 0.0978 | 0.9625 | 0.2940 | 0.048* | |
C6 | 0.4168 (3) | 0.4221 (3) | 0.19650 (18) | 0.0199 (5) | |
C7 | 0.4926 (3) | 0.2975 (3) | 0.2541 (2) | 0.0245 (5) | |
H7 | 0.5361 | 0.3044 | 0.3126 | 0.029* | |
C8 | 0.5049 (3) | 0.1635 (3) | 0.2263 (2) | 0.0285 (6) | |
H8 | 0.5560 | 0.0794 | 0.2661 | 0.034* | |
C9 | 0.4429 (3) | 0.1523 (3) | 0.1411 (2) | 0.0271 (5) | |
H9 | 0.4516 | 0.0607 | 0.1223 | 0.032* | |
C10 | 0.3684 (3) | 0.2743 (3) | 0.08321 (19) | 0.0238 (5) | |
H10 | 0.3244 | 0.2668 | 0.0251 | 0.029* | |
C11 | 0.3575 (3) | 0.4079 (3) | 0.10956 (19) | 0.0225 (5) | |
H11 | 0.3093 | 0.4906 | 0.0680 | 0.027* | |
C12 | 0.6217 (3) | 0.6303 (3) | 0.19063 (17) | 0.0176 (4) | |
C13 | 0.7494 (3) | 0.5069 (3) | 0.14887 (18) | 0.0201 (5) | |
H13 | 0.7382 | 0.4206 | 0.1403 | 0.024* | |
C14 | 0.8925 (3) | 0.5089 (3) | 0.11974 (19) | 0.0236 (5) | |
H14 | 0.9784 | 0.4245 | 0.0913 | 0.028* | |
C15 | 0.9095 (3) | 0.6343 (3) | 0.13229 (19) | 0.0243 (5) | |
H15 | 1.0070 | 0.6359 | 0.1118 | 0.029* | |
C16 | 0.7847 (3) | 0.7577 (3) | 0.17470 (19) | 0.0231 (5) | |
H16 | 0.7970 | 0.8432 | 0.1841 | 0.028* | |
C17 | 0.6419 (3) | 0.7553 (3) | 0.20323 (18) | 0.0198 (5) | |
H17 | 0.5565 | 0.8400 | 0.2318 | 0.024* | |
C18 | 0.2692 (3) | 0.6595 (2) | 0.43182 (18) | 0.0163 (4) | |
C19 | 0.2537 (3) | 0.6844 (3) | 0.54288 (18) | 0.0184 (4) | |
H19A | 0.2739 | 0.7692 | 0.5536 | 0.022* | |
H19B | 0.3354 | 0.5982 | 0.5733 | 0.022* | |
C20 | 0.0950 (3) | 0.7117 (3) | 0.59732 (18) | 0.0194 (5) | |
H20A | 0.0866 | 0.7515 | 0.6645 | 0.023* | |
H20B | 0.0126 | 0.7872 | 0.5600 | 0.023* | |
C21 | 0.0628 (3) | 0.5805 (2) | 0.61014 (17) | 0.0162 (4) | |
C22 | −0.0961 (3) | 0.6051 (3) | 0.65817 (19) | 0.0211 (5) | |
H22A | −0.1493 | 0.7023 | 0.6884 | 0.032* | |
H22B | −0.0851 | 0.5313 | 0.7103 | 0.032* | |
H22C | −0.1579 | 0.5979 | 0.6073 | 0.032* | |
C23 | 0.2715 (3) | 0.2065 (2) | 0.56254 (17) | 0.0170 (4) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Sn1 | 0.01453 (9) | 0.01349 (9) | 0.02213 (10) | −0.00650 (6) | −0.00357 (6) | 0.00085 (6) |
S1 | 0.0168 (3) | 0.0119 (3) | 0.0404 (4) | −0.0064 (2) | −0.0043 (2) | 0.0007 (2) |
O1 | 0.0150 (8) | 0.0209 (8) | 0.0235 (8) | −0.0098 (7) | −0.0020 (6) | −0.0008 (6) |
O2 | 0.0167 (8) | 0.0197 (8) | 0.0223 (8) | −0.0099 (7) | −0.0036 (6) | 0.0004 (6) |
N1 | 0.0180 (9) | 0.0135 (9) | 0.0185 (9) | −0.0081 (8) | −0.0033 (7) | −0.0001 (7) |
N2 | 0.0139 (9) | 0.0128 (9) | 0.0219 (9) | −0.0065 (7) | −0.0021 (7) | 0.0007 (7) |
N3 | 0.0148 (9) | 0.0140 (9) | 0.0349 (11) | −0.0058 (8) | 0.0000 (8) | −0.0047 (8) |
C1 | 0.0213 (12) | 0.0260 (13) | 0.0251 (12) | −0.0028 (10) | −0.0042 (10) | 0.0019 (10) |
C2 | 0.046 (2) | 0.068 (3) | 0.040 (2) | 0.023 (2) | 0.0084 (16) | 0.0231 (19) |
C3 | 0.0378 (16) | 0.0442 (18) | 0.0334 (15) | −0.0241 (14) | −0.0144 (12) | 0.0166 (13) |
C4 | 0.049 (2) | 0.0292 (16) | 0.064 (2) | −0.0123 (15) | −0.0080 (18) | 0.0046 (15) |
C5 | 0.0435 (18) | 0.0289 (15) | 0.0423 (17) | −0.0111 (14) | −0.0067 (14) | 0.0004 (13) |
C6 | 0.0214 (11) | 0.0190 (11) | 0.0228 (11) | −0.0120 (10) | −0.0032 (9) | 0.0000 (9) |
C7 | 0.0274 (13) | 0.0209 (12) | 0.0287 (13) | −0.0120 (10) | −0.0120 (10) | 0.0026 (10) |
C8 | 0.0327 (14) | 0.0183 (12) | 0.0366 (14) | −0.0120 (11) | −0.0105 (11) | 0.0048 (10) |
C9 | 0.0285 (14) | 0.0221 (12) | 0.0323 (14) | −0.0124 (11) | −0.0035 (11) | −0.0021 (10) |
C10 | 0.0257 (13) | 0.0257 (13) | 0.0224 (12) | −0.0133 (11) | −0.0020 (10) | −0.0032 (9) |
C11 | 0.0236 (12) | 0.0205 (12) | 0.0230 (12) | −0.0091 (10) | −0.0052 (9) | 0.0021 (9) |
C12 | 0.0163 (11) | 0.0177 (11) | 0.0186 (10) | −0.0072 (9) | −0.0035 (8) | 0.0027 (8) |
C13 | 0.0215 (12) | 0.0169 (11) | 0.0209 (11) | −0.0075 (9) | −0.0030 (9) | 0.0021 (9) |
C14 | 0.0188 (12) | 0.0238 (12) | 0.0227 (12) | −0.0050 (10) | −0.0008 (9) | 0.0009 (9) |
C15 | 0.0200 (12) | 0.0322 (14) | 0.0232 (12) | −0.0144 (11) | −0.0020 (9) | 0.0040 (10) |
C16 | 0.0265 (13) | 0.0260 (12) | 0.0233 (12) | −0.0171 (11) | −0.0041 (10) | 0.0015 (9) |
C17 | 0.0194 (11) | 0.0185 (11) | 0.0211 (11) | −0.0079 (9) | −0.0026 (9) | −0.0003 (9) |
C18 | 0.0165 (11) | 0.0098 (9) | 0.0234 (11) | −0.0063 (8) | −0.0023 (8) | −0.0002 (8) |
C19 | 0.0206 (11) | 0.0142 (10) | 0.0228 (11) | −0.0095 (9) | −0.0038 (9) | −0.0014 (8) |
C20 | 0.0202 (11) | 0.0143 (10) | 0.0226 (11) | −0.0064 (9) | −0.0013 (9) | −0.0029 (8) |
C21 | 0.0163 (11) | 0.0157 (10) | 0.0162 (10) | −0.0063 (9) | −0.0033 (8) | −0.0009 (8) |
C22 | 0.0172 (11) | 0.0209 (11) | 0.0234 (11) | −0.0070 (9) | −0.0006 (9) | −0.0032 (9) |
C23 | 0.0173 (11) | 0.0139 (10) | 0.0203 (11) | −0.0068 (9) | −0.0050 (8) | 0.0006 (8) |
Sn1—O1 | 2.063 (2) | C7—H7 | 0.9500 |
Sn1—C1 | 2.131 (3) | C8—C9 | 1.379 (4) |
Sn1—C6 | 2.125 (2) | C8—H8 | 0.9500 |
Sn1—C12 | 2.134 (2) | C9—C10 | 1.380 (4) |
S1—C23 | 1.695 (2) | C9—H9 | 0.9500 |
O1—C18 | 1.320 (3) | C10—C11 | 1.387 (4) |
O2—C18 | 1.227 (3) | C10—H10 | 0.9500 |
N1—C21 | 1.283 (3) | C11—H11 | 0.9500 |
N1—N2 | 1.387 (3) | C12—C13 | 1.398 (3) |
N2—C23 | 1.350 (3) | C12—C17 | 1.399 (3) |
N2—H2N | 0.8800 | C13—C14 | 1.391 (4) |
N3—C23 | 1.325 (3) | C13—H13 | 0.9500 |
N3—H3N1 | 0.8800 | C14—C15 | 1.384 (4) |
N3—H3N2 | 0.8800 | C14—H14 | 0.9500 |
C1—C5 | 1.492 (4) | C15—C16 | 1.389 (4) |
C1—C2 | 1.522 (4) | C15—H15 | 0.9500 |
C1—H1 | 1.0000 | C16—C17 | 1.388 (4) |
C2—C3 | 1.532 (5) | C16—H16 | 0.9500 |
C2—H2A | 0.9900 | C17—H17 | 0.9500 |
C2—H2B | 0.9900 | C18—C19 | 1.505 (3) |
C3—C4 | 1.519 (5) | C19—C20 | 1.520 (3) |
C3—H3A | 0.9900 | C19—H19A | 0.9900 |
C3—H3B | 0.9900 | C19—H19B | 0.9900 |
C4—C5 | 1.547 (5) | C20—C21 | 1.503 (3) |
C4—H4A | 0.9900 | C20—H20A | 0.9900 |
C4—H4B | 0.9900 | C20—H20B | 0.9900 |
C5—H5A | 0.9900 | C21—C22 | 1.499 (3) |
C5—H5B | 0.9900 | C22—H22A | 0.9800 |
C6—C11 | 1.396 (3) | C22—H22B | 0.9800 |
C6—C7 | 1.398 (3) | C22—H22C | 0.9800 |
C7—C8 | 1.393 (4) | ||
O1—Sn1—C1 | 112.7 (1) | C8—C9—H9 | 120.0 |
O1—Sn1—C6 | 108.6 (1) | C10—C9—H9 | 120.0 |
O1—Sn1—C12 | 95.9 (1) | C9—C10—C11 | 120.2 (2) |
C1—Sn1—C6 | 116.5 (1) | C9—C10—H10 | 119.9 |
C1—Sn1—C12 | 112.1 (1) | C11—C10—H10 | 119.9 |
C6—Sn1—C12 | 109.2 (1) | C10—C11—C6 | 120.7 (2) |
Sn1—O1—C18 | 109.3 (1) | C10—C11—H11 | 119.7 |
C21—N1—N2 | 118.3 (2) | C6—C11—H11 | 119.7 |
C23—N2—N1 | 117.11 (19) | C13—C12—C17 | 118.4 (2) |
C23—N2—H2N | 121.4 | C13—C12—Sn1 | 120.71 (18) |
N1—N2—H2N | 121.4 | C17—C12—Sn1 | 120.94 (18) |
C23—N3—H3N1 | 120.0 | C14—C13—C12 | 120.8 (2) |
C23—N3—H3N2 | 120.0 | C14—C13—H13 | 119.6 |
H3N1—N3—H3N2 | 120.0 | C12—C13—H13 | 119.6 |
C5—C1—C2 | 106.2 (3) | C15—C14—C13 | 119.9 (2) |
C5—C1—Sn1 | 116.7 (2) | C15—C14—H14 | 120.1 |
C2—C1—Sn1 | 113.0 (2) | C13—C14—H14 | 120.1 |
C5—C1—H1 | 106.8 | C14—C15—C16 | 120.4 (2) |
C2—C1—H1 | 106.8 | C14—C15—H15 | 119.8 |
Sn1—C1—H1 | 106.8 | C16—C15—H15 | 119.8 |
C1—C2—C3 | 106.9 (3) | C17—C16—C15 | 119.5 (2) |
C1—C2—H2A | 110.3 | C17—C16—H16 | 120.2 |
C3—C2—H2A | 110.3 | C15—C16—H16 | 120.2 |
C1—C2—H2B | 110.3 | C16—C17—C12 | 121.1 (2) |
C3—C2—H2B | 110.3 | C16—C17—H17 | 119.5 |
H2A—C2—H2B | 108.6 | C12—C17—H17 | 119.5 |
C4—C3—C2 | 104.5 (3) | O2—C18—O1 | 120.5 (2) |
C4—C3—H3A | 110.9 | O2—C18—C19 | 125.2 (2) |
C2—C3—H3A | 110.9 | O1—C18—C19 | 114.2 (2) |
C4—C3—H3B | 110.9 | C18—C19—C20 | 114.6 (2) |
C2—C3—H3B | 110.9 | C18—C19—H19A | 108.6 |
H3A—C3—H3B | 108.9 | C20—C19—H19A | 108.6 |
C3—C4—C5 | 104.1 (3) | C18—C19—H19B | 108.6 |
C3—C4—H4A | 110.9 | C20—C19—H19B | 108.6 |
C5—C4—H4A | 110.9 | H19A—C19—H19B | 107.6 |
C3—C4—H4B | 110.9 | C21—C20—C19 | 115.40 (19) |
C5—C4—H4B | 110.9 | C21—C20—H20A | 108.4 |
H4A—C4—H4B | 109.0 | C19—C20—H20A | 108.4 |
C1—C5—C4 | 102.4 (3) | C21—C20—H20B | 108.4 |
C1—C5—H5A | 111.3 | C19—C20—H20B | 108.4 |
C4—C5—H5A | 111.3 | H20A—C20—H20B | 107.5 |
C1—C5—H5B | 111.3 | N1—C21—C22 | 126.5 (2) |
C4—C5—H5B | 111.3 | N1—C21—C20 | 116.6 (2) |
H5A—C5—H5B | 109.2 | C22—C21—C20 | 116.8 (2) |
C11—C6—C7 | 118.4 (2) | C21—C22—H22A | 109.5 |
C11—C6—Sn1 | 119.38 (18) | C21—C22—H22B | 109.5 |
C7—C6—Sn1 | 122.09 (18) | H22A—C22—H22B | 109.5 |
C8—C7—C6 | 120.4 (2) | C21—C22—H22C | 109.5 |
C8—C7—H7 | 119.8 | H22A—C22—H22C | 109.5 |
C6—C7—H7 | 119.8 | H22B—C22—H22C | 109.5 |
C9—C8—C7 | 120.2 (3) | N3—C23—N2 | 117.2 (2) |
C9—C8—H8 | 119.9 | N3—C23—S1 | 123.29 (18) |
C7—C8—H8 | 119.9 | N2—C23—S1 | 119.54 (18) |
C8—C9—C10 | 120.0 (2) | ||
C6—Sn1—O1—C18 | −77.70 (16) | C9—C10—C11—C6 | −2.2 (4) |
C1—Sn1—O1—C18 | 52.80 (17) | C7—C6—C11—C10 | 2.5 (4) |
C12—Sn1—O1—C18 | 169.72 (15) | Sn1—C6—C11—C10 | 179.0 (2) |
C21—N1—N2—C23 | −174.8 (2) | O1—Sn1—C12—C13 | 110.54 (19) |
O1—Sn1—C1—C5 | 32.7 (3) | C6—Sn1—C12—C13 | −1.5 (2) |
C6—Sn1—C1—C5 | 159.1 (2) | C1—Sn1—C12—C13 | −132.09 (19) |
C12—Sn1—C1—C5 | −74.2 (2) | O1—Sn1—C12—C17 | −70.09 (19) |
O1—Sn1—C1—C2 | 156.3 (3) | C6—Sn1—C12—C17 | 177.87 (18) |
C6—Sn1—C1—C2 | −77.3 (3) | C1—Sn1—C12—C17 | 47.3 (2) |
C12—Sn1—C1—C2 | 49.4 (3) | C17—C12—C13—C14 | −0.6 (4) |
C5—C1—C2—C3 | −15.5 (4) | Sn1—C12—C13—C14 | 178.79 (18) |
Sn1—C1—C2—C3 | −144.7 (3) | C12—C13—C14—C15 | 0.2 (4) |
C1—C2—C3—C4 | −9.9 (5) | C13—C14—C15—C16 | 0.6 (4) |
C2—C3—C4—C5 | 30.7 (4) | C14—C15—C16—C17 | −0.9 (4) |
C2—C1—C5—C4 | 34.0 (4) | C15—C16—C17—C12 | 0.4 (4) |
Sn1—C1—C5—C4 | 161.0 (2) | C13—C12—C17—C16 | 0.3 (4) |
C3—C4—C5—C1 | −40.3 (4) | Sn1—C12—C17—C16 | −179.07 (18) |
O1—Sn1—C6—C11 | 155.98 (19) | Sn1—O1—C18—O2 | 5.1 (3) |
C1—Sn1—C6—C11 | 27.6 (2) | Sn1—O1—C18—C19 | −173.25 (14) |
C12—Sn1—C6—C11 | −100.6 (2) | O2—C18—C19—C20 | 2.0 (3) |
O1—Sn1—C6—C7 | −27.7 (2) | O1—C18—C19—C20 | −179.78 (19) |
C1—Sn1—C6—C7 | −156.1 (2) | C18—C19—C20—C21 | 72.7 (3) |
C12—Sn1—C6—C7 | 75.7 (2) | N2—N1—C21—C22 | 2.0 (3) |
C11—C6—C7—C8 | −1.6 (4) | N2—N1—C21—C20 | −178.51 (19) |
Sn1—C6—C7—C8 | −178.0 (2) | C19—C20—C21—N1 | 3.9 (3) |
C6—C7—C8—C9 | 0.4 (4) | C19—C20—C21—C22 | −176.6 (2) |
C7—C8—C9—C10 | −0.1 (4) | N1—N2—C23—N3 | 6.1 (3) |
C8—C9—C10—C11 | 1.0 (4) | N1—N2—C23—S1 | −174.76 (16) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2n···O2i | 0.88 | 2.12 | 2.975 (3) | 163 |
N3—H3n1···O1ii | 0.88 | 2.43 | 3.121 (3) | 136 |
N3—H3n2···S1iii | 0.88 | 2.54 | 3.389 (2) | 161 |
Symmetry codes: (i) −x, −y+1, −z+1; (ii) −x+1, −y+1, −z+1; (iii) −x+1, −y, −z+1. |
Experimental details
Crystal data | |
Chemical formula | [Sn(C5H9)(C6H5)2(C6H10N3O2S)] |
Mr | 530.24 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 100 |
a, b, c (Å) | 9.5780 (1), 10.2375 (1), 13.4205 (1) |
α, β, γ (°) | 86.901 (1), 83.370 (1), 63.667 (1) |
V (Å3) | 1171.50 (2) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 1.20 |
Crystal size (mm) | 0.30 × 0.15 × 0.10 |
Data collection | |
Diffractometer | Bruker SMART APEXII diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.779, 0.889 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 15020, 5350, 5186 |
Rint | 0.014 |
(sin θ/λ)max (Å−1) | 0.650 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.028, 0.078, 1.03 |
No. of reflections | 5350 |
No. of parameters | 272 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 1.99, −0.91 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), X-SEED (Barbour, 2001), publCIF (Westrip, 2008).
Sn1—O1 | 2.063 (2) | Sn1—C6 | 2.125 (2) |
Sn1—C1 | 2.131 (3) | Sn1—C12 | 2.134 (2) |
O1—Sn1—C1 | 112.7 (1) | C1—Sn1—C12 | 112.1 (1) |
O1—Sn1—C6 | 108.6 (1) | C6—Sn1—C12 | 109.2 (1) |
O1—Sn1—C12 | 95.9 (1) | Sn1—O1—C18 | 109.3 (1) |
C1—Sn1—C6 | 116.5 (1) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2n···O2i | 0.88 | 2.12 | 2.975 (3) | 163 |
N3—H3n1···O1ii | 0.88 | 2.43 | 3.121 (3) | 136 |
N3—H3n2···S1iii | 0.88 | 2.54 | 3.389 (2) | 161 |
Symmetry codes: (i) −x, −y+1, −z+1; (ii) −x+1, −y+1, −z+1; (iii) −x+1, −y, −z+1. |
Acknowledgements
We thank the University of Malaya for funding this study (FR155/2007 A) and also for the purchase of the diffractometer.
References
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Triorganotin carboxylates having two different organyl substituents possess ehanced anti-bacterial and anti-fungal properties compared with the symmetrical compounds (Koshy et al., 2001). The synthesis of cyclopentyldiphenyltin hydroxide, which is the principal reagent that condenses readily with carboxylic acids, is a multi-step synthesis. Previous studies have characterized a few cyclopentyldiphenyltin derivatives (Lo & Ng, 2004; Lo et al., 1999; Teo et al., 2004). In the reaction with levulinic acid thiosemicarbazone (Ng, 1992), the organotin hydroxide yields a four-coordinate compound (I) (Fig. 1 & Table 1). The tin atom exists in a tetrahedral geometry; adjacent molecules are linked by hydrogen bonds into a layer structure, Table 2.