organic compounds
2-[2-(Trimethylsilyl)ethyl]isoindoline-1,3-dione
aDepartment of Chemistry, University of Wisconsin–Madison, 1101 University Ave, Madison, Wisconsin 53706, USA
*Correspondence e-mail: iguzei@chem.wisc.edu
In the course of our studies of silicon-containing anticancer compounds, the title compound, C13H17NO2Si, was synthesized. The geometrical parameters including the geometry about the Si atom are typical. The molecules form dimers via a weak C—H⋯O interaction described by the graph set R22(10). The dimers are assembled in rows stacked in the crystallographic b-axis direction via π–π interactions with a 3.332 (3) Å separation between the rows.
Related literature
For literature related to drug design see: Bains & Tacke (2003); Bikzhanova et al. (2007); Franz (2007); Franz et al. (2007); Gately & West (2007); Guzei,, Spencer, Zakai & Lynch (2010); Guzei, Spencer & Zakai (2010); Lee et al. (1993, 1996); Sen & Roach (1995); Showell & Mills (2003); Tacke & Zilch (1986); Tsuge et al. (1985); Yoon et al. (1991, 1992, 1997). For a description of the Cambridge Structural Database, see: Allen (2002). Bond distances and angles were confirmed to be typical by a Mogul structural check (Bruno et al., 2002). For graph-set notation, see: Grell et al. (1999).
Experimental
Crystal data
|
Refinement
|
Data collection: APEX2 and GIS (Bruker, 2009); cell SAINT (Bruker, 2009); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL, OLEX2 (Dolomanov et al., 2009) and FCF_filter (Guzei, 2007); molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL, modiCIFer (Guzei, 2007) and publCIF (Westrip, 2010).
Supporting information
10.1107/S1600536809054105/zs2025sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809054105/zs2025Isup2.hkl
The title compound was obtained via a Mitsunubu reaction as described by Sen and co-workers (Sen & Roach, 1995). To a pre-dried 100 ml round bottom flask was added 2-(trimethylsilyl)ethanol (319 mg, 2.7 mmol). Additionally, potassium phthalimide (512 mg, 3.48 mmol) and triphenyl phosphine (913, 3.48 mmol) were added to the reaction flask. The flask was sealed with a rubber septum, evacuated, and then filled with an inert atmosphere (nitrogen). Subsequently, 30 ml of freshly distilled THF was added to the round bottom flask. In the dark, the flask was then wrapped with aluminium foil and diisopropyl azodicarboxylate (DIAD) was slowly syringed into the reaction flask. This mixture was allowed to stir at room temperature for four hours. Three ml of water was slowly injected into the reaction mixture, and the given suspension was allowed to stir for a few more minutes. The aluminium foil covering the reaction flask was removed and its contents were poured into an extraction flask. The aqueous phase was extracted 3–5 times with hexane and the resultant organic extracts were dried with MgSO4 and filtered. The filtrate was mixed with silica gel and this slurry was dried under reduced pressure. The dry powder was loaded onto a pre-dry packed silica gel column and eluted with a gradient column. The desired material was collected using a 8:2 hexane:ethyl acetate mixture. The compound of interest was dried under reduced pressure and recrystallized from dichloromethane to afford lustrous white needles (0.35 g, 1.41 mmol, 52% yield) for X-ray crystallography. Manipulation of air and moisture sensitive compounds was performed using standard high-vacuum line techniques. All solvents and reagents were obtained from Aldrich. 2-(trimethylsilyl)ethanol was purchased from Gelest. 1H NMR spectra were obtained on a Varian Unity 500 spectrometer, 13C {H} NMR spectra were obtained on a Varian 500 spectrometer operating at 125 MHz, 29Si {H} NMR spectra were obtained on a Varian Unity spectrometer operating at 99 MHz. EI Mass spectra were determined on a Waters (Micromass) AutoSpec δ 0.04 (s, 9H, Si(Me3)3), 0.98 (m, 2H, CH2), 3.69 (m, 2H, CH2), 7.66 (dd, J=5.48, 3.01 Hz, 2H, ArH), 7.79 (dd, J=5.42, 3.06 Hz, 2H, ArH); 13C NMR (125 MHz, CDCl3) δ -1.8 (SiMe), 17.0 (CH2), 34.4 (CH2), 123.0 (CH), 132.3 (CH), 133.7 (CH), 168.2 (CO); 29Si NMR (99 MHz, CDCl3) 0.01 (Si(Me3)3); MS (EI+) m/z (rel. intensity %) 247 (M+, 23), 246 (M-1, 100), 232 (50), 204 (75), 160 (26), 130 (55), 91 (49), 73 (39); HRMS (EI+): calcd. for C13H17NO2Si (M+) 247.1024, found (M-1)+ 246.0945.
Melting points were determined on a Mel-Temp Laboratory Device. mp: 48–50°; 1H NMR (500 MHz, CDCl3)All H-atoms were placed in idealized locations and refined as riding with appropriate thermal displacement coefficients Uiso(H) = 1.2 or 1.5 times Ueq(bearing atom). The data were collected at room temperature on a Bruker SMART X2S diffractometer in the automated mode and manually processed thereafter.
Data collection: GIS (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008), OLEX2 (Dolomanov et al., 2009) and FCF_filter (Guzei, 2007); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008), modiCIFer (Guzei, 2007) and publCIF (Westrip, 2010).Fig. 1. Molecular structure of (I). The thermal ellipsoids are shown at 30% probability level. |
C13H17NO2Si | F(000) = 528 |
Mr = 247.37 | Dx = 1.145 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 2755 reflections |
a = 11.562 (5) Å | θ = 3.4–23.7° |
b = 6.411 (2) Å | µ = 0.16 mm−1 |
c = 19.445 (8) Å | T = 300 K |
β = 95.176 (14)° | Needle, colourless |
V = 1435.5 (10) Å3 | 0.89 × 0.40 × 0.30 mm |
Z = 4 |
Bruker SMART X2S diffractometer | 2701 independent reflections |
Radiation source: micro-focus sealed tube | 1750 reflections with I > 2σ(I) |
Doubly curved silicon crystal monochromator | Rint = 0.036 |
ω scans | θmax = 25.7°, θmin = 3.4° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −14→14 |
Tmin = 0.875, Tmax = 0.955 | k = −7→7 |
9164 measured reflections | l = −23→23 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.044 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.151 | H-atom parameters constrained |
S = 0.99 | w = 1/[σ2(Fo2) + (0.0922P)2 + 0.0229P] where P = (Fo2 + 2Fc2)/3 |
2701 reflections | (Δ/σ)max = 0.010 |
157 parameters | Δρmax = 0.15 e Å−3 |
0 restraints | Δρmin = −0.16 e Å−3 |
C13H17NO2Si | V = 1435.5 (10) Å3 |
Mr = 247.37 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 11.562 (5) Å | µ = 0.16 mm−1 |
b = 6.411 (2) Å | T = 300 K |
c = 19.445 (8) Å | 0.89 × 0.40 × 0.30 mm |
β = 95.176 (14)° |
Bruker SMART X2S diffractometer | 2701 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 1750 reflections with I > 2σ(I) |
Tmin = 0.875, Tmax = 0.955 | Rint = 0.036 |
9164 measured reflections |
R[F2 > 2σ(F2)] = 0.044 | 0 restraints |
wR(F2) = 0.151 | H-atom parameters constrained |
S = 0.99 | Δρmax = 0.15 e Å−3 |
2701 reflections | Δρmin = −0.16 e Å−3 |
157 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Si1 | 0.90115 (5) | 0.20211 (9) | 0.38252 (3) | 0.0610 (3) | |
O1 | 0.75423 (19) | 0.2215 (3) | 0.61648 (12) | 0.1052 (7) | |
O2 | 0.60178 (16) | 0.7082 (3) | 0.46280 (10) | 0.0929 (6) | |
N1 | 0.68492 (15) | 0.4340 (3) | 0.52646 (10) | 0.0686 (5) | |
C1 | 0.8769 (3) | −0.0839 (4) | 0.38950 (16) | 0.0987 (9) | |
H1A | 0.9213 | −0.1366 | 0.4299 | 0.148* | |
H1B | 0.9009 | −0.1522 | 0.3492 | 0.148* | |
H1C | 0.7959 | −0.1103 | 0.3930 | 0.148* | |
C2 | 1.0592 (2) | 0.2585 (5) | 0.37947 (16) | 0.1010 (9) | |
H2A | 1.1015 | 0.2083 | 0.4209 | 0.152* | |
H2B | 1.0705 | 0.4063 | 0.3757 | 0.152* | |
H2C | 1.0869 | 0.1900 | 0.3402 | 0.152* | |
C3 | 0.8170 (3) | 0.3029 (5) | 0.30296 (15) | 0.1078 (10) | |
H3A | 0.8418 | 0.2326 | 0.2632 | 0.162* | |
H3B | 0.8302 | 0.4500 | 0.2989 | 0.162* | |
H3C | 0.7357 | 0.2778 | 0.3058 | 0.162* | |
C4 | 0.85121 (18) | 0.3403 (3) | 0.45914 (11) | 0.0615 (6) | |
H4A | 0.8976 | 0.2924 | 0.5001 | 0.074* | |
H4B | 0.8659 | 0.4883 | 0.4543 | 0.074* | |
C5 | 0.72357 (19) | 0.3103 (4) | 0.47001 (13) | 0.0773 (7) | |
H5A | 0.6770 | 0.3469 | 0.4277 | 0.093* | |
H5B | 0.7100 | 0.1640 | 0.4792 | 0.093* | |
C6 | 0.7031 (2) | 0.3775 (4) | 0.59582 (14) | 0.0758 (7) | |
C7 | 0.6491 (2) | 0.5451 (4) | 0.63477 (13) | 0.0724 (6) | |
C8 | 0.6418 (3) | 0.5693 (6) | 0.70431 (16) | 0.0995 (9) | |
H8 | 0.6728 | 0.4707 | 0.7359 | 0.119* | |
C9 | 0.5867 (3) | 0.7459 (7) | 0.72558 (18) | 0.1135 (11) | |
H9 | 0.5795 | 0.7658 | 0.7724 | 0.136* | |
C10 | 0.5424 (3) | 0.8922 (6) | 0.67926 (19) | 0.1061 (10) | |
H10 | 0.5059 | 1.0092 | 0.6955 | 0.127* | |
C11 | 0.5502 (2) | 0.8714 (4) | 0.60893 (15) | 0.0847 (8) | |
H11 | 0.5206 | 0.9715 | 0.5775 | 0.102* | |
C12 | 0.60455 (18) | 0.6934 (4) | 0.58821 (12) | 0.0659 (6) | |
C13 | 0.62725 (19) | 0.6246 (4) | 0.51808 (13) | 0.0679 (6) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Si1 | 0.0681 (4) | 0.0500 (4) | 0.0653 (4) | −0.0086 (3) | 0.0081 (3) | −0.0030 (3) |
O1 | 0.1094 (16) | 0.0863 (13) | 0.1218 (16) | 0.0091 (12) | 0.0198 (13) | 0.0246 (12) |
O2 | 0.0852 (13) | 0.1100 (14) | 0.0822 (13) | 0.0171 (11) | −0.0001 (10) | 0.0038 (10) |
N1 | 0.0528 (11) | 0.0727 (12) | 0.0818 (13) | −0.0037 (9) | 0.0134 (9) | −0.0067 (10) |
C1 | 0.119 (2) | 0.0547 (15) | 0.125 (2) | −0.0060 (14) | 0.0245 (19) | −0.0052 (15) |
C2 | 0.0817 (19) | 0.113 (2) | 0.113 (2) | −0.0169 (17) | 0.0352 (17) | −0.0301 (18) |
C3 | 0.140 (3) | 0.100 (2) | 0.0790 (18) | −0.0160 (19) | −0.0120 (18) | 0.0127 (15) |
C4 | 0.0537 (13) | 0.0573 (12) | 0.0731 (14) | −0.0078 (10) | 0.0040 (10) | −0.0068 (10) |
C5 | 0.0557 (14) | 0.0794 (16) | 0.0971 (18) | −0.0096 (12) | 0.0096 (13) | −0.0228 (13) |
C6 | 0.0624 (15) | 0.0761 (16) | 0.0902 (18) | −0.0133 (13) | 0.0135 (12) | 0.0076 (14) |
C7 | 0.0562 (13) | 0.0845 (16) | 0.0787 (16) | −0.0124 (12) | 0.0180 (12) | 0.0012 (13) |
C8 | 0.088 (2) | 0.129 (3) | 0.0849 (19) | −0.0080 (18) | 0.0235 (15) | 0.0079 (18) |
C9 | 0.091 (2) | 0.167 (3) | 0.086 (2) | −0.014 (2) | 0.0268 (18) | −0.025 (2) |
C10 | 0.078 (2) | 0.124 (3) | 0.120 (3) | −0.0098 (18) | 0.0273 (19) | −0.045 (2) |
C11 | 0.0559 (14) | 0.0910 (18) | 0.108 (2) | −0.0047 (13) | 0.0119 (13) | −0.0201 (16) |
C12 | 0.0427 (11) | 0.0765 (15) | 0.0791 (15) | −0.0121 (11) | 0.0095 (10) | −0.0134 (13) |
C13 | 0.0469 (12) | 0.0777 (15) | 0.0789 (16) | −0.0061 (11) | 0.0040 (11) | −0.0031 (13) |
Si1—C1 | 1.862 (2) | C4—C5 | 1.522 (3) |
Si1—C2 | 1.869 (3) | C4—H4A | 0.9700 |
Si1—C4 | 1.869 (2) | C4—H4B | 0.9700 |
Si1—C3 | 1.867 (3) | C5—H5A | 0.9700 |
O1—C6 | 1.212 (3) | C5—H5B | 0.9700 |
O2—C13 | 1.213 (3) | C6—C7 | 1.484 (4) |
N1—C6 | 1.394 (3) | C7—C8 | 1.371 (4) |
N1—C13 | 1.395 (3) | C7—C12 | 1.380 (3) |
N1—C5 | 1.457 (3) | C8—C9 | 1.381 (5) |
C1—H1A | 0.9600 | C8—H8 | 0.9300 |
C1—H1B | 0.9600 | C9—C10 | 1.367 (5) |
C1—H1C | 0.9600 | C9—H9 | 0.9300 |
C2—H2A | 0.9600 | C10—C11 | 1.385 (4) |
C2—H2B | 0.9600 | C10—H10 | 0.9300 |
C2—H2C | 0.9600 | C11—C12 | 1.380 (3) |
C3—H3A | 0.9600 | C11—H11 | 0.9300 |
C3—H3B | 0.9600 | C12—C13 | 1.479 (3) |
C3—H3C | 0.9600 | ||
C1—Si1—C2 | 110.31 (14) | H4A—C4—H4B | 107.5 |
C1—Si1—C4 | 110.45 (11) | N1—C5—C4 | 113.77 (18) |
C2—Si1—C4 | 107.87 (11) | N1—C5—H5A | 108.8 |
C1—Si1—C3 | 109.30 (14) | C4—C5—H5A | 108.8 |
C2—Si1—C3 | 110.16 (15) | N1—C5—H5B | 108.8 |
C4—Si1—C3 | 108.73 (14) | C4—C5—H5B | 108.8 |
C6—N1—C13 | 111.7 (2) | H5A—C5—H5B | 107.7 |
C6—N1—C5 | 123.9 (2) | O1—C6—N1 | 124.2 (3) |
C13—N1—C5 | 124.4 (2) | O1—C6—C7 | 130.1 (3) |
Si1—C1—H1A | 109.5 | N1—C6—C7 | 105.8 (2) |
Si1—C1—H1B | 109.5 | C8—C7—C12 | 121.1 (2) |
H1A—C1—H1B | 109.5 | C8—C7—C6 | 130.6 (3) |
Si1—C1—H1C | 109.5 | C12—C7—C6 | 108.3 (2) |
H1A—C1—H1C | 109.5 | C7—C8—C9 | 117.3 (3) |
H1B—C1—H1C | 109.5 | C7—C8—H8 | 121.3 |
Si1—C2—H2A | 109.5 | C9—C8—H8 | 121.3 |
Si1—C2—H2B | 109.5 | C10—C9—C8 | 121.4 (3) |
H2A—C2—H2B | 109.5 | C10—C9—H9 | 119.3 |
Si1—C2—H2C | 109.5 | C8—C9—H9 | 119.3 |
H2A—C2—H2C | 109.5 | C9—C10—C11 | 122.1 (3) |
H2B—C2—H2C | 109.5 | C9—C10—H10 | 119.0 |
Si1—C3—H3A | 109.5 | C11—C10—H10 | 119.0 |
Si1—C3—H3B | 109.5 | C10—C11—C12 | 116.1 (3) |
H3A—C3—H3B | 109.5 | C10—C11—H11 | 122.0 |
Si1—C3—H3C | 109.5 | C12—C11—H11 | 122.0 |
H3A—C3—H3C | 109.5 | C11—C12—C7 | 122.1 (2) |
H3B—C3—H3C | 109.5 | C11—C12—C13 | 129.7 (2) |
C5—C4—Si1 | 115.09 (15) | C7—C12—C13 | 108.2 (2) |
C5—C4—H4A | 108.5 | O2—C13—N1 | 124.5 (2) |
Si1—C4—H4A | 108.5 | O2—C13—C12 | 129.5 (2) |
C5—C4—H4B | 108.5 | N1—C13—C12 | 106.0 (2) |
Si1—C4—H4B | 108.5 | ||
C1—Si1—C4—C5 | −59.0 (2) | C8—C9—C10—C11 | 0.1 (5) |
C2—Si1—C4—C5 | −179.61 (18) | C9—C10—C11—C12 | 0.5 (4) |
C3—Si1—C4—C5 | 60.9 (2) | C10—C11—C12—C7 | −0.3 (4) |
C6—N1—C5—C4 | −80.8 (3) | C10—C11—C12—C13 | −179.8 (2) |
C13—N1—C5—C4 | 98.0 (3) | C8—C7—C12—C11 | −0.4 (3) |
Si1—C4—C5—N1 | −174.99 (17) | C6—C7—C12—C11 | −178.9 (2) |
C13—N1—C6—O1 | −177.9 (2) | C8—C7—C12—C13 | 179.2 (2) |
C5—N1—C6—O1 | 1.0 (4) | C6—C7—C12—C13 | 0.7 (2) |
C13—N1—C6—C7 | 1.7 (2) | C6—N1—C13—O2 | 179.6 (2) |
C5—N1—C6—C7 | −179.43 (18) | C5—N1—C13—O2 | 0.7 (3) |
O1—C6—C7—C8 | −0.2 (5) | C6—N1—C13—C12 | −1.3 (2) |
N1—C6—C7—C8 | −179.7 (2) | C5—N1—C13—C12 | 179.83 (18) |
O1—C6—C7—C12 | 178.1 (3) | C11—C12—C13—O2 | −1.0 (4) |
N1—C6—C7—C12 | −1.4 (2) | C7—C12—C13—O2 | 179.4 (2) |
C12—C7—C8—C9 | 1.0 (4) | C11—C12—C13—N1 | 179.9 (2) |
C6—C7—C8—C9 | 179.1 (3) | C7—C12—C13—N1 | 0.3 (2) |
C7—C8—C9—C10 | −0.8 (5) |
D—H···A | D—H | H···A | D···A | D—H···A |
C11—H11···O2i | 0.93 | 2.57 | 3.443 (4) | 156 |
Symmetry code: (i) −x+1, −y+2, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C13H17NO2Si |
Mr | 247.37 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 300 |
a, b, c (Å) | 11.562 (5), 6.411 (2), 19.445 (8) |
β (°) | 95.176 (14) |
V (Å3) | 1435.5 (10) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.16 |
Crystal size (mm) | 0.89 × 0.40 × 0.30 |
Data collection | |
Diffractometer | Bruker SMART X2S diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.875, 0.955 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 9164, 2701, 1750 |
Rint | 0.036 |
(sin θ/λ)max (Å−1) | 0.610 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.044, 0.151, 0.99 |
No. of reflections | 2701 |
No. of parameters | 157 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.15, −0.16 |
Computer programs: GIS (Bruker, 2009), SAINT (Bruker, 2009), SHELXTL (Sheldrick, 2008), OLEX2 (Dolomanov et al., 2009) and FCF_filter (Guzei, 2007), SHELXTL (Sheldrick, 2008), modiCIFer (Guzei, 2007) and publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
C11—H11···O2i | 0.93 | 2.57 | 3.443 (4) | 155.5 |
Symmetry code: (i) −x+1, −y+2, −z+1. |
Acknowledgements
We thank Dr N. J. Hill (UW-Madison) for acquiring the data and Professor R. West (UW-Madison) for his support. We gratefully acknowledge Bruker sponsorship of this publication and also acknowledge grants NIH 1 S10 RRO 8389–01 and NSF CHE-9629688 for providing NMR spectrometers, and grant NSF CHE-9304546 for providing the
for this work.References
Allen, F. H. (2002). Acta Cryst. B58, 380–388. Web of Science CrossRef CAS IUCr Journals Google Scholar
Bains, W. & Tacke, R. (2003). Curr. Opin. Drug Discov. Devel. 6, 526–543. Web of Science PubMed CAS Google Scholar
Bikzhanova, G. A., Toulokhonova, I. S., Gately, S. & West, R. (2007). Silicon Chem. 3, 209–217. CrossRef Google Scholar
Bruker (2009). APEX2, GIS, SADABS and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Bruno, I. J., Cole, J. C., Edgington, P. R., Kessler, M., Macrae, C. F., McCabe, P., Pearson, J. & Taylor, R. (2002). Acta Cryst. B58, 389–397. Web of Science CrossRef CAS IUCr Journals Google Scholar
Dolomanov, O. V., Bourhis, L. J., Gildea, R. J., Howard, J. A. K. & Puschmann, H. (2009). J. Appl. Cryst. 42, 339–341. Web of Science CrossRef CAS IUCr Journals Google Scholar
Franz, A. K. T. (2007). Curr. Opin. Drug Discov. Devel. 10, 654–671. Web of Science PubMed CAS Google Scholar
Franz, A. K., Dreyfuss, P. D. & Schreiber, S. L. (2007). J. Am. Chem. Soc. 129, 1020–1021. Web of Science CSD CrossRef PubMed CAS Google Scholar
Gately, S. & West, R. (2007). Drug Dev. Res. 68, 156–163. Web of Science CrossRef CAS Google Scholar
Grell, J., Bernstein, J. & Tinhofer, G. (1999). Acta Cryst. B55, 1030–1043. Web of Science CrossRef CAS IUCr Journals Google Scholar
Guzei, I. A. (2007). In-house Crystallographic Programs: FCF_filter, INSerter and modiCIFer. Molecular Structure Laboratory, University of Wisconsin–Madison, Madison, Wisconsin, USA. Google Scholar
Guzei, I. A., Spencer, L. C. & Zakai, U. I. (2010). Acta Cryst. E66, o219–o220. Web of Science CSD CrossRef IUCr Journals Google Scholar
Guzei, I. A., Spencer, L. C., Zakai, U. I. & Lynch, D. C. (2010). Acta Cryst. E66, o221–o222. Web of Science CSD CrossRef IUCr Journals Google Scholar
Lee, Y. J., Lee, C. P., Jeon, Y. T., Mariano, P. S., Yoon, U. C., Kim, D. U., Kim, J. C. & Lee, J. G. (1993). Tetrahedron Lett. 34, 5855–5858. CAS Google Scholar
Lee, Y. J., Ling, R., Mariano, P. S., Yoon, U. C., Kim, D. U. & Oh, S. W. (1996). J. Org. Chem. 61, 3304–3314. CrossRef CAS Web of Science Google Scholar
Sen, S. E. & Roach, S. L. (1995). Synthesis, pp. 756–758. CrossRef Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Showell, G. A. & Mills, J. S. (2003). Drug Discov. Today, 8, 551–556. Web of Science CrossRef PubMed CAS Google Scholar
Tacke, R. & Zilch, H. (1986). Endeavour, 10, 191–197. CrossRef CAS PubMed Web of Science Google Scholar
Tsuge, O., Tanaka, J. & Kanemasa, S. (1985). Bull. Chem. Soc. Jpn, 58, 1991–1999. CrossRef CAS Web of Science Google Scholar
Westrip, S. P. (2010). publCIF. In preparation. Google Scholar
Yoon, U. C., Cho, S. J., Oh, J. H., Lee, J. G., Kang, K. T. & Mariano, P. S. (1991). Bull. Korean Chem. Soc. 12, 241–243. CAS Google Scholar
Yoon, U. C., Kim, J. W., Ryu, J. Y., Cho, S. J., Oh, S. W. & Mariano, P. S. (1997). J. Photochem. Photobiol. A Chem. 106, 145–154. CrossRef CAS Web of Science Google Scholar
Yoon, U. C., Oh, J. H., Lee, S. J., Kim, D. U., Lee, J. G., Kang, K. T. & Mariano, P. S. (1992). Bull. Korean Chem. Soc. 13, 166–172. CAS Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Sila phthalimides are important intermediates in photochemistry (Lee et al., 1993, 1996; Yoon et al., 1997, 1992, 1991) and organic synthesis (Bikzhanova et al., 2007; Tsuge et al., 1985). We have used methods of organosilicon chemistry (Franz, 2007; Franz et al., 2007; Gately & West, 2007; Tacke & Zilch, 1986; Showell & Mills, 2003) to prepare an array of substituted sila amines (Bikzhanova et al., 2007) and to fine-tune the properties of pharmocological drugs (Bains & Tacke, 2003). Sila phthalimides can be obtained from the respective chlorosilanes (Tsuge et al., 1985) or from alcohols by means of the Misunubu reaction (Sen & Roach, 1995) as in the present case. During our research toward silicon-containing anti-cancer drugs the title compound, (I), was isolated and characterized.
The bond distances and angles of (I) are typical as confirmed by the Mogul structural check (Bruno et al., 2002), and agree well with those for the related compounds 2-(3-(methyldiphenylsilyl)propyl)isoindoline-1,3-dione (Guzei, Spencer, Zakai & Lynch, 2010) and 2-(((4-methoxyphenyl)dimethylsilyl)methyl)isoindoline-1,3-dione (Guzei, Spencer & Zakai, 2010). Specifically, the average Si—C distances of 1.867 (3) Å for compound (I) are statistically similar to the 1.88 (3) Å average for 83 related compounds in the Cambridge Structural Database (Version 1.11, September 2009 release; Allen, 2002). The Si atom has a distorted tetrahedral geometry with angles ranging from 107.87 (11)° to 110.45 (11) °. The phthalate entity is expectedly planar within 0.0083 Å.
The molecules form dimers via a weak C11—H11···O2 interaction with a distance of 3.443 (4) Å and an angle of 155°. The pattern formed can be described in graph set notation as R22(10) (Grell et. al., 1999). The dimers are assembled into rows via weak π-π interactions with a distance of 3.366 (5) Å between atoms C13 in separate dimers. The rows are stacked in the crystallographic b direction.