metal-organic compounds
Di-μ-but-2-enoato-bis[diaquabis(but-2-enoato)neodymium(III)] 2,6-diaminopurine disolvate
aFacultad de Ciencias Químicas y Farmacéuticas, Universidad de Chile, Casilla 233, Santiago, Chile, bDepartamento de Física, Facultad de Ciencias Físicas y Matemáticas, Universidad de Chile, Santiago de Chile, Chile, and cDepartamento de Física, Centro Atómico Constituyentes, Comisión Nacional de Energía Atómica, Buenos Aires, Argentina
*Correspondence e-mail: baggio@cnea.gov.ar
The title Nd complex [Nd2(C4H5O2)6(H2O)4]·2C5H6N6 is isotypic with two previously reported Dy and Ho isologues. It is composed of [Nd(crot)3(H2O)2]2 dimers [crot(onate) = but-2-enoate = C4H5O2], built up around symmetry centres and completed by 2,6-diaminepurine molecules acting as solvates. The neodymium cations are coordinated by three chelating crotonato units and two water molecules. One of the chelating carboxylates acts also in a bridging mode, sharing one oxygen with both cations, and the final result is a pair of NdO9 tricapped prismatic polyhedra linked to each other through a central (Nd—O)2 loop. A most attractive aspect of the structures resides in the existence of a complex intermolecular hydrogen-bonding interaction scheme involving two sets of tightly interlinked, non-intersecting one-dimensional structures, one of them formed by the [Nd(crot)3(H2O)2]2 dimers running along [100] and the second by the solvate molecules evolving along [010].
Related literature
For the Dy and Ho isologues, see: Atria et al. (2009). For hydrogen-bond motifs, see: Bernstein et al. (1995).
Experimental
Crystal data
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Refinement
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Data collection: SMART-NT (Bruker, 2001); cell SAINT-NT (Bruker, 2002); data reduction: SAINT-NT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL-NT (Sheldrick, 2008); software used to prepare material for publication: SHELXTL-NT and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536811028558/bt5580sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536811028558/bt5580Isup2.hkl
A mixture of Nd2O3 (1 mmol) and crotonic acid (3 mmol) was dissolved in water (100 mmol),followed by the addition of the 2,6-diaminopurine ligand (1 mmol) dissolved in methanol (10 ml). The resultant mixture was refluxed for 24 h, filtered while hot, and then concentrated to 25 ml. The filtrate was left at room temperature. On standing, colorless crystals suitable for single-crystal X-ray diffraction appeared, which were used without further processing.
All the H atoms were clearly seen in a difference Fourier; they were, however, further idealized at their expected positions and allowed to ride both in coordinates (C—H = 0.93–0.98, N–H = 0.88 Å), as well as in their isotropic displacement factors (Uiso(H) = 1.2/1.5× Uequiv(host).
Data collection: SMART-NT (Bruker, 2001); cell
SAINT-NT (Bruker, 2002); data reduction: SAINT-NT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL-NT (Sheldrick, 2008); software used to prepare material for publication: SHELXTL-NT (Sheldrick, 2008) and PLATON (Spek, 2009).Fig. 1. : Ellipsoid plot of (1) drawn at a 40% probability level, with independent (symmetry related) atoms in bold (simple) bonds and filled (empty) ellipsoids. Symmetry codes: (i) -x, -y, -z. | |
Fig. 2. : Packing view of (1) projected down c, showing the 'dimeric' chains and their internal H-bonding linkage (See text). For clarity, only the carboxylato end of the butenoate units have been drawn. Symmetry codes: (i) -x, -y, -z;.(v) -x + 1, -y, -z | |
Fig. 3. : Packing view of (1) projected down a, showing on the projection plane (running vertically, in hollow bonds) the 'solvato' chains. Perpendicular to the latter and coming out of the plane (in bold, full bonds) the 'dimeric' chains. Intra- as well as inter-chain H-bonds shown in broken lines. For clarity, only the carboxylato end of the butenoate units have been drawn. Symmetry codes: (i) -x, -y, -z; (ii) x, y + 1, z; (iii) -x + 1, -y + 2, -z + 1; (iv) -x + 1, -y + 1, -z + 1; (v) -x + 1, -y, -z; (vi) -x + 1, -y + 1, -z; (vii) x - 1, y - 1, z. |
[Nd2(C4H5O2)6(H2O)4]·2C5H6N6 | Z = 1 |
Mr = 1171.34 | F(000) = 586 |
Triclinic, P1 | Dx = 1.737 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 8.6441 (2) Å | Cell parameters from 4220 reflections |
b = 11.1173 (3) Å | θ = 1.9–25.7° |
c = 13.3944 (3) Å | µ = 2.37 mm−1 |
α = 101.230 (9)° | T = 150 K |
β = 107.522 (11)° | Block, colourless |
γ = 106.591 (10)° | 0.24 × 0.20 × 0.14 mm |
V = 1119.51 (15) Å3 |
Bruker SMART CCD area-detector diffractometer | 4941 independent reflections |
Radiation source: fine-focus sealed tube | 4663 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.011 |
phi and ω scans | θmax = 28.3°, θmin = 1.7° |
Absorption correction: multi-scan (SADABS;Bruker, 2002) | h = −11→11 |
Tmin = 0.57, Tmax = 0.72 | k = −13→14 |
9674 measured reflections | l = −17→17 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.024 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.061 | H-atom parameters constrained |
S = 1.07 | w = 1/[σ2(Fo2) + (0.0304P)2 + 1.1713P] where P = (Fo2 + 2Fc2)/3 |
4941 reflections | (Δ/σ)max = 0.001 |
292 parameters | Δρmax = 1.29 e Å−3 |
0 restraints | Δρmin = −0.85 e Å−3 |
[Nd2(C4H5O2)6(H2O)4]·2C5H6N6 | γ = 106.591 (10)° |
Mr = 1171.34 | V = 1119.51 (15) Å3 |
Triclinic, P1 | Z = 1 |
a = 8.6441 (2) Å | Mo Kα radiation |
b = 11.1173 (3) Å | µ = 2.37 mm−1 |
c = 13.3944 (3) Å | T = 150 K |
α = 101.230 (9)° | 0.24 × 0.20 × 0.14 mm |
β = 107.522 (11)° |
Bruker SMART CCD area-detector diffractometer | 4941 independent reflections |
Absorption correction: multi-scan (SADABS;Bruker, 2002) | 4663 reflections with I > 2σ(I) |
Tmin = 0.57, Tmax = 0.72 | Rint = 0.011 |
9674 measured reflections |
R[F2 > 2σ(F2)] = 0.024 | 0 restraints |
wR(F2) = 0.061 | H-atom parameters constrained |
S = 1.07 | Δρmax = 1.29 e Å−3 |
4941 reflections | Δρmin = −0.85 e Å−3 |
292 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
Nd1 | 0.260333 (17) | 0.113788 (13) | 0.062493 (11) | 0.02382 (5) | |
O11 | 0.1168 (3) | 0.2601 (2) | 0.11102 (18) | 0.0352 (4) | |
O21 | 0.2709 (3) | 0.3212 (2) | 0.01582 (17) | 0.0359 (5) | |
C11 | 0.1849 (4) | 0.3454 (3) | 0.0708 (2) | 0.0305 (6) | |
C21 | 0.1654 (4) | 0.4734 (3) | 0.0913 (3) | 0.0398 (7) | |
H21 | 0.2010 | 0.5305 | 0.0514 | 0.048* | |
C31 | 0.1017 (5) | 0.5111 (4) | 0.1615 (3) | 0.0495 (9) | |
H31 | 0.0616 | 0.4502 | 0.1974 | 0.059* | |
C41 | 0.0853 (6) | 0.6405 (4) | 0.1915 (4) | 0.0722 (13) | |
H41A | 0.1315 | 0.6946 | 0.1499 | 0.108* | |
H41B | 0.1513 | 0.6850 | 0.2705 | 0.108* | |
H41C | −0.0379 | 0.6278 | 0.1741 | 0.108* | |
O12 | 0.5504 (3) | 0.1008 (2) | 0.16470 (18) | 0.0385 (5) | |
O22 | 0.5282 (3) | 0.2922 (2) | 0.19938 (18) | 0.0376 (5) | |
C12 | 0.6183 (4) | 0.2221 (3) | 0.2132 (2) | 0.0326 (6) | |
C22 | 0.8009 (5) | 0.2872 (5) | 0.2872 (3) | 0.0562 (10) | |
H22 | 0.8379 | 0.3779 | 0.3263 | 0.067* | |
C32 | 0.9095 (6) | 0.2381 (5) | 0.3037 (4) | 0.0692 (12) | |
H32 | 0.8756 | 0.1472 | 0.2663 | 0.083* | |
C42 | 1.0982 (6) | 0.3138 (8) | 0.3813 (5) | 0.116 (3) | |
H42A | 1.1107 | 0.4015 | 0.4223 | 0.174* | |
H42B | 1.1731 | 0.3228 | 0.3388 | 0.174* | |
H42C | 1.1328 | 0.2659 | 0.4330 | 0.174* | |
O13 | 0.2514 (3) | 0.0698 (2) | 0.23400 (17) | 0.0367 (5) | |
O23 | 0.0035 (2) | −0.02354 (19) | 0.09761 (15) | 0.0305 (4) | |
C13 | 0.0973 (3) | −0.0041 (3) | 0.1969 (2) | 0.0271 (5) | |
C23 | 0.0184 (4) | −0.0740 (3) | 0.2616 (2) | 0.0352 (6) | |
H23 | −0.1026 | −0.1264 | 0.2294 | 0.042* | |
C33 | 0.1062 (4) | −0.0674 (3) | 0.3606 (3) | 0.0392 (7) | |
H33 | 0.2243 | −0.0081 | 0.3937 | 0.047* | |
C43 | 0.0379 (5) | −0.1449 (4) | 0.4274 (3) | 0.0576 (10) | |
H43A | −0.0858 | −0.1991 | 0.3856 | 0.086* | |
H43B | 0.0512 | −0.0845 | 0.4960 | 0.086* | |
H43C | 0.1034 | −0.2020 | 0.4444 | 0.086* | |
O1W | 0.2282 (3) | −0.1192 (2) | −0.00386 (19) | 0.0403 (5) | |
H1WA | 0.1293 | −0.1771 | −0.0462 | 0.048* | |
H1WB | 0.3099 | −0.1466 | −0.0023 | 0.048* | |
O2W | 0.4103 (3) | 0.1137 (2) | −0.06425 (18) | 0.0369 (5) | |
H2WA | 0.4049 | 0.0384 | −0.0961 | 0.044* | |
H2WB | 0.4146 | 0.1621 | −0.1056 | 0.044* | |
N1 | 0.5071 (3) | 0.8157 (2) | 0.4590 (2) | 0.0354 (5) | |
C2 | 0.5012 (4) | 0.6968 (3) | 0.4716 (2) | 0.0352 (6) | |
N2 | 0.4739 (4) | 0.6752 (3) | 0.5609 (2) | 0.0506 (7) | |
H2A | 0.4928 | 0.6065 | 0.5776 | 0.061* | |
H2B | 0.5222 | 0.7482 | 0.6167 | 0.061* | |
N3 | 0.5160 (3) | 0.5994 (2) | 0.4061 (2) | 0.0338 (5) | |
C4 | 0.5414 (4) | 0.6308 (3) | 0.3204 (2) | 0.0300 (6) | |
C5 | 0.5486 (4) | 0.7467 (3) | 0.2965 (2) | 0.0304 (6) | |
C6 | 0.5307 (4) | 0.8426 (3) | 0.3711 (2) | 0.0319 (6) | |
N6 | 0.5395 (4) | 0.9612 (3) | 0.3599 (2) | 0.0425 (6) | |
H6A | 0.5220 | 1.0164 | 0.4081 | 0.051* | |
H6B | 0.5347 | 0.9734 | 0.2962 | 0.051* | |
N7 | 0.5774 (3) | 0.7426 (2) | 0.2006 (2) | 0.0359 (5) | |
C8 | 0.5872 (4) | 0.6272 (3) | 0.1702 (3) | 0.0373 (7) | |
H8 | 0.6058 | 0.5959 | 0.1052 | 0.045* | |
N9 | 0.5685 (3) | 0.5568 (2) | 0.2398 (2) | 0.0345 (5) | |
H9 | 0.5731 | 0.4778 | 0.2338 | 0.041* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Nd1 | 0.02283 (8) | 0.02416 (8) | 0.02502 (8) | 0.00972 (6) | 0.00944 (6) | 0.00655 (6) |
O11 | 0.0376 (11) | 0.0296 (10) | 0.0449 (12) | 0.0148 (9) | 0.0221 (10) | 0.0113 (9) |
O21 | 0.0419 (12) | 0.0363 (11) | 0.0393 (11) | 0.0197 (9) | 0.0209 (10) | 0.0157 (9) |
C11 | 0.0264 (13) | 0.0292 (14) | 0.0300 (14) | 0.0112 (11) | 0.0047 (11) | 0.0044 (11) |
C21 | 0.0367 (16) | 0.0324 (16) | 0.0485 (18) | 0.0168 (13) | 0.0110 (14) | 0.0110 (14) |
C31 | 0.048 (2) | 0.0411 (19) | 0.052 (2) | 0.0232 (16) | 0.0112 (16) | 0.0028 (16) |
C41 | 0.071 (3) | 0.058 (3) | 0.078 (3) | 0.043 (2) | 0.012 (2) | −0.006 (2) |
O12 | 0.0328 (11) | 0.0375 (12) | 0.0443 (12) | 0.0196 (9) | 0.0105 (9) | 0.0073 (10) |
O22 | 0.0350 (11) | 0.0269 (10) | 0.0421 (12) | 0.0099 (9) | 0.0076 (9) | 0.0048 (9) |
C12 | 0.0302 (14) | 0.0379 (16) | 0.0277 (14) | 0.0093 (12) | 0.0122 (11) | 0.0088 (12) |
C22 | 0.0336 (18) | 0.075 (3) | 0.050 (2) | 0.0154 (18) | 0.0088 (16) | 0.0157 (19) |
C32 | 0.052 (2) | 0.088 (3) | 0.064 (3) | 0.025 (2) | 0.018 (2) | 0.023 (2) |
C42 | 0.039 (2) | 0.206 (8) | 0.091 (4) | 0.027 (3) | 0.008 (2) | 0.074 (5) |
O13 | 0.0275 (10) | 0.0437 (12) | 0.0300 (10) | 0.0035 (9) | 0.0071 (8) | 0.0129 (9) |
O23 | 0.0285 (10) | 0.0339 (10) | 0.0267 (10) | 0.0101 (8) | 0.0081 (8) | 0.0098 (8) |
C13 | 0.0290 (13) | 0.0274 (13) | 0.0267 (13) | 0.0125 (11) | 0.0114 (11) | 0.0079 (11) |
C23 | 0.0292 (14) | 0.0385 (16) | 0.0360 (15) | 0.0079 (12) | 0.0128 (12) | 0.0135 (13) |
C33 | 0.0384 (16) | 0.0445 (18) | 0.0335 (16) | 0.0115 (14) | 0.0151 (13) | 0.0127 (14) |
C43 | 0.062 (2) | 0.071 (3) | 0.045 (2) | 0.019 (2) | 0.0251 (18) | 0.0310 (19) |
O1W | 0.0308 (11) | 0.0298 (11) | 0.0576 (14) | 0.0131 (9) | 0.0163 (10) | 0.0052 (10) |
O2W | 0.0533 (13) | 0.0362 (11) | 0.0409 (12) | 0.0258 (10) | 0.0301 (10) | 0.0202 (9) |
N1 | 0.0407 (14) | 0.0333 (13) | 0.0329 (13) | 0.0153 (11) | 0.0132 (11) | 0.0108 (10) |
C2 | 0.0371 (15) | 0.0354 (15) | 0.0302 (14) | 0.0103 (13) | 0.0112 (12) | 0.0113 (12) |
N2 | 0.076 (2) | 0.0489 (17) | 0.0386 (15) | 0.0263 (16) | 0.0296 (15) | 0.0204 (13) |
N3 | 0.0387 (13) | 0.0323 (13) | 0.0314 (12) | 0.0118 (11) | 0.0132 (11) | 0.0141 (10) |
C4 | 0.0281 (13) | 0.0278 (14) | 0.0297 (14) | 0.0076 (11) | 0.0087 (11) | 0.0074 (11) |
C5 | 0.0295 (13) | 0.0283 (14) | 0.0311 (14) | 0.0077 (11) | 0.0103 (11) | 0.0107 (11) |
C6 | 0.0303 (14) | 0.0289 (14) | 0.0343 (15) | 0.0098 (11) | 0.0097 (12) | 0.0107 (12) |
N6 | 0.0630 (18) | 0.0351 (14) | 0.0426 (15) | 0.0268 (13) | 0.0256 (14) | 0.0179 (12) |
N7 | 0.0424 (14) | 0.0322 (13) | 0.0364 (13) | 0.0124 (11) | 0.0186 (11) | 0.0137 (11) |
C8 | 0.0430 (17) | 0.0349 (16) | 0.0358 (16) | 0.0118 (13) | 0.0201 (13) | 0.0104 (13) |
N9 | 0.0401 (13) | 0.0293 (12) | 0.0363 (13) | 0.0136 (11) | 0.0162 (11) | 0.0106 (10) |
Nd1—O23i | 2.3912 (18) | O23—Nd1i | 2.3912 (18) |
Nd1—O11 | 2.415 (2) | C13—C23 | 1.461 (4) |
Nd1—O2W | 2.426 (2) | C23—C33 | 1.290 (4) |
Nd1—O13 | 2.459 (2) | C23—H23 | 0.9500 |
Nd1—O22 | 2.462 (2) | C33—C43 | 1.489 (5) |
Nd1—O1W | 2.474 (2) | C33—H33 | 0.9500 |
Nd1—O21 | 2.489 (2) | C43—H43A | 0.9800 |
Nd1—O12 | 2.530 (2) | C43—H43B | 0.9800 |
Nd1—O23 | 2.5402 (19) | C43—H43C | 0.9800 |
O11—C11 | 1.268 (4) | O1W—H1WA | 0.8474 |
O21—C11 | 1.238 (3) | O1W—H1WB | 0.8415 |
C11—C21 | 1.463 (4) | O2W—H2WA | 0.8435 |
C21—C31 | 1.286 (5) | O2W—H2WB | 0.8453 |
C21—H21 | 0.9500 | N1—C6 | 1.328 (4) |
C31—C41 | 1.475 (5) | N1—C2 | 1.353 (4) |
C31—H31 | 0.9500 | C2—N3 | 1.317 (4) |
C41—H41A | 0.9800 | C2—N2 | 1.339 (4) |
C41—H41B | 0.9800 | N2—H2A | 0.8800 |
C41—H41C | 0.9800 | N2—H2B | 0.8800 |
O12—C12 | 1.250 (4) | N3—C4 | 1.323 (4) |
O22—C12 | 1.250 (4) | C4—N9 | 1.346 (4) |
C12—C22 | 1.457 (4) | C4—C5 | 1.376 (4) |
C22—C32 | 1.202 (6) | C5—N7 | 1.374 (4) |
C22—H22 | 0.9500 | C5—C6 | 1.390 (4) |
C32—C42 | 1.518 (6) | C6—N6 | 1.339 (4) |
C32—H32 | 0.9500 | N6—H6A | 0.8800 |
C42—H42A | 0.9800 | N6—H6B | 0.8800 |
C42—H42B | 0.9800 | N7—C8 | 1.303 (4) |
C42—H42C | 0.9800 | C8—N9 | 1.346 (4) |
O13—C13 | 1.231 (3) | C8—H8 | 0.9500 |
O23—C13 | 1.269 (3) | N9—H9 | 0.8800 |
O23i—Nd1—O11 | 80.44 (7) | C22—C32—C42 | 123.4 (6) |
O23i—Nd1—O2W | 86.10 (7) | C22—C32—H32 | 118.3 |
O11—Nd1—O2W | 128.71 (7) | C42—C32—H32 | 118.3 |
O23i—Nd1—O13 | 118.74 (6) | C32—C42—H42A | 109.5 |
O11—Nd1—O13 | 81.64 (7) | C32—C42—H42B | 109.5 |
O2W—Nd1—O13 | 145.49 (7) | H42A—C42—H42B | 109.5 |
O23i—Nd1—O22 | 154.36 (7) | C32—C42—H42C | 109.5 |
O11—Nd1—O22 | 84.47 (7) | H42A—C42—H42C | 109.5 |
O2W—Nd1—O22 | 87.34 (8) | H42B—C42—H42C | 109.5 |
O13—Nd1—O22 | 78.97 (7) | C13—O13—Nd1 | 97.38 (17) |
O23i—Nd1—O1W | 77.04 (7) | C13—O23—Nd1i | 155.29 (18) |
O11—Nd1—O1W | 145.13 (7) | C13—O23—Nd1 | 92.44 (16) |
O2W—Nd1—O1W | 75.96 (7) | Nd1i—O23—Nd1 | 112.26 (7) |
O13—Nd1—O1W | 86.25 (8) | O13—C13—O23 | 119.0 (3) |
O22—Nd1—O1W | 125.07 (7) | O13—C13—C23 | 122.6 (3) |
O23i—Nd1—O21 | 82.11 (7) | O23—C13—C23 | 118.4 (2) |
O11—Nd1—O21 | 52.48 (7) | C33—C23—C13 | 122.7 (3) |
O2W—Nd1—O21 | 76.82 (7) | C33—C23—H23 | 118.6 |
O13—Nd1—O21 | 126.93 (7) | C13—C23—H23 | 118.6 |
O22—Nd1—O21 | 72.27 (7) | C23—C33—C43 | 125.5 (3) |
O1W—Nd1—O21 | 146.56 (8) | C23—C33—H33 | 117.3 |
O23i—Nd1—O12 | 147.82 (7) | C43—C33—H33 | 117.3 |
O11—Nd1—O12 | 131.72 (7) | C33—C43—H43A | 109.5 |
O2W—Nd1—O12 | 74.11 (7) | C33—C43—H43B | 109.5 |
O13—Nd1—O12 | 72.59 (7) | H43A—C43—H43B | 109.5 |
O22—Nd1—O12 | 51.36 (7) | C33—C43—H43C | 109.5 |
O1W—Nd1—O12 | 73.72 (7) | H43A—C43—H43C | 109.5 |
O21—Nd1—O12 | 116.47 (7) | H43B—C43—H43C | 109.5 |
O23i—Nd1—O23 | 67.74 (7) | Nd1—O1W—H1WA | 120.1 |
O11—Nd1—O23 | 73.71 (7) | Nd1—O1W—H1WB | 125.9 |
O2W—Nd1—O23 | 143.16 (7) | H1WA—O1W—H1WB | 112.2 |
O13—Nd1—O23 | 51.01 (6) | Nd1—O2W—H2WA | 114.2 |
O22—Nd1—O23 | 127.16 (7) | Nd1—O2W—H2WB | 125.8 |
O1W—Nd1—O23 | 73.26 (7) | H2WA—O2W—H2WB | 110.5 |
O21—Nd1—O23 | 121.93 (6) | C6—N1—C2 | 118.7 (3) |
O12—Nd1—O23 | 115.04 (7) | N3—C2—N2 | 116.3 (3) |
C11—O11—Nd1 | 94.84 (16) | N3—C2—N1 | 128.0 (3) |
C11—O21—Nd1 | 92.12 (17) | N2—C2—N1 | 115.7 (3) |
O21—C11—O11 | 119.9 (3) | C2—N2—H2A | 116.1 |
O21—C11—C21 | 119.9 (3) | C2—N2—H2B | 111.5 |
O11—C11—C21 | 120.1 (3) | H2A—N2—H2B | 114.5 |
C31—C21—C11 | 122.2 (3) | C2—N3—C4 | 111.3 (3) |
C31—C21—H21 | 118.9 | N3—C4—N9 | 127.0 (3) |
C11—C21—H21 | 118.9 | N3—C4—C5 | 127.0 (3) |
C21—C31—C41 | 125.9 (4) | N9—C4—C5 | 105.9 (3) |
C21—C31—H31 | 117.0 | N7—C5—C4 | 109.9 (3) |
C41—C31—H31 | 117.0 | N7—C5—C6 | 133.2 (3) |
C31—C41—H41A | 109.5 | C4—C5—C6 | 116.8 (3) |
C31—C41—H41B | 109.5 | N1—C6—N6 | 118.6 (3) |
H41A—C41—H41B | 109.5 | N1—C6—C5 | 118.1 (3) |
C31—C41—H41C | 109.5 | N6—C6—C5 | 123.3 (3) |
H41A—C41—H41C | 109.5 | C6—N6—H6A | 119.2 |
H41B—C41—H41C | 109.5 | C6—N6—H6B | 118.3 |
C12—O12—Nd1 | 92.73 (17) | H6A—N6—H6B | 120.5 |
C12—O22—Nd1 | 95.96 (17) | C8—N7—C5 | 104.0 (2) |
O22—C12—O12 | 119.8 (3) | N7—C8—N9 | 113.4 (3) |
O22—C12—C22 | 117.6 (3) | N7—C8—H8 | 123.3 |
O12—C12—C22 | 122.6 (3) | N9—C8—H8 | 123.3 |
C32—C22—C12 | 126.7 (5) | C8—N9—C4 | 106.7 (3) |
C32—C22—H22 | 116.6 | C8—N9—H9 | 126.7 |
C12—C22—H22 | 116.6 | C4—N9—H9 | 126.7 |
O23i—Nd1—O11—C11 | −91.82 (17) | O21—Nd1—O13—C13 | 106.38 (18) |
O2W—Nd1—O11—C11 | −14.7 (2) | O12—Nd1—O13—C13 | −143.22 (19) |
O13—Nd1—O11—C11 | 147.00 (17) | O23—Nd1—O13—C13 | 2.32 (16) |
O22—Nd1—O11—C11 | 67.38 (17) | O23i—Nd1—O23—C13 | 179.2 (2) |
O1W—Nd1—O11—C11 | −142.05 (17) | O11—Nd1—O23—C13 | −94.62 (16) |
O21—Nd1—O11—C11 | −4.47 (15) | O2W—Nd1—O23—C13 | 131.21 (16) |
O12—Nd1—O11—C11 | 89.43 (18) | O13—Nd1—O23—C13 | −2.24 (15) |
O23—Nd1—O11—C11 | −161.28 (18) | O22—Nd1—O23—C13 | −24.95 (18) |
O23i—Nd1—O21—C11 | 88.54 (17) | O1W—Nd1—O23—C13 | 96.72 (16) |
O11—Nd1—O21—C11 | 4.57 (16) | O21—Nd1—O23—C13 | −116.22 (16) |
O2W—Nd1—O21—C11 | 176.36 (18) | O12—Nd1—O23—C13 | 34.34 (17) |
O13—Nd1—O21—C11 | −31.7 (2) | O23i—Nd1—O23—Nd1i | 0.0 |
O22—Nd1—O21—C11 | −92.21 (17) | O11—Nd1—O23—Nd1i | 86.13 (9) |
O1W—Nd1—O21—C11 | 140.16 (17) | O2W—Nd1—O23—Nd1i | −48.03 (14) |
O12—Nd1—O21—C11 | −119.15 (17) | O13—Nd1—O23—Nd1i | 178.52 (13) |
O23—Nd1—O21—C11 | 31.01 (19) | O22—Nd1—O23—Nd1i | 155.80 (7) |
Nd1—O21—C11—O11 | −8.0 (3) | O1W—Nd1—O23—Nd1i | −82.53 (9) |
Nd1—O21—C11—C21 | 170.7 (2) | O21—Nd1—O23—Nd1i | 64.54 (10) |
Nd1—O11—C11—O21 | 8.2 (3) | O12—Nd1—O23—Nd1i | −144.91 (8) |
Nd1—O11—C11—C21 | −170.4 (2) | Nd1—O13—C13—O23 | −4.1 (3) |
O21—C11—C21—C31 | −168.8 (3) | Nd1—O13—C13—C23 | 174.0 (2) |
O11—C11—C21—C31 | 9.8 (5) | Nd1i—O23—C13—O13 | −177.7 (3) |
C11—C21—C31—C41 | 176.8 (3) | Nd1—O23—C13—O13 | 4.0 (3) |
O23i—Nd1—O12—C12 | 151.90 (16) | Nd1i—O23—C13—C23 | 4.1 (6) |
O11—Nd1—O12—C12 | −30.4 (2) | Nd1—O23—C13—C23 | −174.3 (2) |
O2W—Nd1—O12—C12 | 97.70 (18) | O13—C13—C23—C33 | −2.9 (5) |
O13—Nd1—O12—C12 | −91.49 (18) | O23—C13—C23—C33 | 175.2 (3) |
O22—Nd1—O12—C12 | −1.83 (16) | C13—C23—C33—C43 | −174.3 (3) |
O1W—Nd1—O12—C12 | 177.35 (19) | C6—N1—C2—N3 | −0.1 (5) |
O21—Nd1—O12—C12 | 31.69 (19) | C6—N1—C2—N2 | −178.9 (3) |
O23—Nd1—O12—C12 | −120.53 (17) | N2—C2—N3—C4 | 179.6 (3) |
O23i—Nd1—O22—C12 | −145.16 (18) | N1—C2—N3—C4 | 0.8 (5) |
O11—Nd1—O22—C12 | 160.82 (18) | C2—N3—C4—N9 | 177.3 (3) |
O2W—Nd1—O22—C12 | −69.88 (18) | C2—N3—C4—C5 | −1.5 (4) |
O13—Nd1—O22—C12 | 78.28 (18) | N3—C4—C5—N7 | 179.9 (3) |
O1W—Nd1—O22—C12 | 0.9 (2) | N9—C4—C5—N7 | 0.9 (3) |
O21—Nd1—O22—C12 | −146.88 (19) | N3—C4—C5—C6 | 1.4 (4) |
O12—Nd1—O22—C12 | 1.84 (16) | N9—C4—C5—C6 | −177.6 (3) |
O23—Nd1—O22—C12 | 96.09 (18) | C2—N1—C6—N6 | −178.8 (3) |
Nd1—O22—C12—O12 | −3.4 (3) | C2—N1—C6—C5 | −0.2 (4) |
Nd1—O22—C12—C22 | 176.9 (3) | N7—C5—C6—N1 | −178.5 (3) |
Nd1—O12—C12—O22 | 3.3 (3) | C4—C5—C6—N1 | −0.4 (4) |
Nd1—O12—C12—C22 | −177.1 (3) | N7—C5—C6—N6 | 0.1 (5) |
O22—C12—C22—C32 | −173.8 (4) | C4—C5—C6—N6 | 178.2 (3) |
O12—C12—C22—C32 | 6.5 (6) | C4—C5—N7—C8 | −0.2 (3) |
C12—C22—C32—C42 | 179.2 (4) | C6—C5—N7—C8 | 178.0 (3) |
O23i—Nd1—O13—C13 | 3.9 (2) | C5—N7—C8—N9 | −0.6 (4) |
O11—Nd1—O13—C13 | 78.10 (18) | N7—C8—N9—C4 | 1.1 (4) |
O2W—Nd1—O13—C13 | −127.48 (18) | N3—C4—N9—C8 | 179.8 (3) |
O22—Nd1—O13—C13 | 164.05 (19) | C5—C4—N9—C8 | −1.2 (3) |
O1W—Nd1—O13—C13 | −69.12 (18) |
Symmetry code: (i) −x, −y, −z. |
D—H···A | D—H | H···A | D···A | D—H···A |
N9—H9···O22 | 0.88 | 1.92 | 2.784 (3) | 167 |
N6—H6B···O12ii | 0.88 | 2.48 | 3.301 (4) | 156 |
N6—H6A···N1iii | 0.88 | 2.44 | 3.319 (4) | 175 |
N2—H2A···N3iv | 0.88 | 2.32 | 3.190 (4) | 168 |
N2—H2B···O13iv | 0.88 | 2.39 | 3.228 (4) | 158 |
O1W—H1WB···O2Wv | 0.84 | 2.20 | 2.959 (3) | 150 |
O1W—H1WA···O11i | 0.85 | 1.89 | 2.699 (3) | 158 |
O2W—H2WB···N7vi | 0.85 | 1.81 | 2.656 (3) | 177 |
O2W—H2WA···O12v | 0.84 | 1.84 | 2.665 (3) | 165 |
C8—H8···O21vi | 0.95 | 2.38 | 3.168 (4) | 140 |
C23—H23···N7vii | 0.95 | 2.60 | 3.521 (4) | 163 |
C33—H33···N1iv | 0.95 | 2.57 | 3.465 (4) | 156 |
Symmetry codes: (i) −x, −y, −z; (ii) x, y+1, z; (iii) −x+1, −y+2, −z+1; (iv) −x+1, −y+1, −z+1; (v) −x+1, −y, −z; (vi) −x+1, −y+1, −z; (vii) x−1, y−1, z. |
Experimental details
Crystal data | |
Chemical formula | [Nd2(C4H5O2)6(H2O)4]·2C5H6N6 |
Mr | 1171.34 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 150 |
a, b, c (Å) | 8.6441 (2), 11.1173 (3), 13.3944 (3) |
α, β, γ (°) | 101.230 (9), 107.522 (11), 106.591 (10) |
V (Å3) | 1119.51 (15) |
Z | 1 |
Radiation type | Mo Kα |
µ (mm−1) | 2.37 |
Crystal size (mm) | 0.24 × 0.20 × 0.14 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS;Bruker, 2002) |
Tmin, Tmax | 0.57, 0.72 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 9674, 4941, 4663 |
Rint | 0.011 |
(sin θ/λ)max (Å−1) | 0.666 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.024, 0.061, 1.07 |
No. of reflections | 4941 |
No. of parameters | 292 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 1.29, −0.85 |
Computer programs: SMART-NT (Bruker, 2001), SAINT-NT (Bruker, 2002), SAINT-NT, SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL-NT (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N9—H9···O22 | 0.88 | 1.92 | 2.784 (3) | 166.9 |
N6—H6B···O12i | 0.88 | 2.48 | 3.301 (4) | 156.3 |
N6—H6A···N1ii | 0.88 | 2.44 | 3.319 (4) | 175.2 |
N2—H2A···N3iii | 0.88 | 2.32 | 3.190 (4) | 168.0 |
N2—H2B···O13iii | 0.88 | 2.39 | 3.228 (4) | 158.3 |
O1W—H1WB···O2Wiv | 0.84 | 2.20 | 2.959 (3) | 149.6 |
O1W—H1WA···O11v | 0.85 | 1.89 | 2.699 (3) | 158.4 |
O2W—H2WB···N7vi | 0.85 | 1.81 | 2.656 (3) | 176.5 |
O2W—H2WA···O12iv | 0.84 | 1.84 | 2.665 (3) | 164.9 |
C8—H8···O21vi | 0.95 | 2.38 | 3.168 (4) | 139.8 |
C23—H23···N7vii | 0.95 | 2.60 | 3.521 (4) | 163.4 |
C33—H33···N1iii | 0.95 | 2.57 | 3.465 (4) | 156.4 |
Symmetry codes: (i) x, y+1, z; (ii) −x+1, −y+2, −z+1; (iii) −x+1, −y+1, −z+1; (iv) −x+1, −y, −z; (v) −x, −y, −z; (vi) −x+1, −y+1, −z; (vii) x−1, y−1, z. |
Acknowledgements
We acknowledge the Spanish Research Council (CSIC) for providing us with a free-of-charge license to the Cambridge Structural Database (Allen, 2002). We also acknowledge funding under project Fondecyt 1110154.
References
Allen, F. H. (2002). Acta Cryst. B58, 380–388. Web of Science CrossRef CAS IUCr Journals Google Scholar
Atria, A. M., Astete, A., Garland, M. T. & Baggio, R. (2009). Acta Cryst. C65, m411–m414. Web of Science CSD CrossRef IUCr Journals Google Scholar
Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl. 34, 1555–1573. CrossRef CAS Web of Science Google Scholar
Bruker (2001). SMART-NT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Bruker (2002). SAINT-NT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Spek, A. L. (2009). Acta Cryst. D65, 148–155. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The title Nd complex [C24H38Nd2O16, 2(C5H6N6)] is isomorphous to two previously reported Dy and Ho isologues (Atria et al., 2009) and its structure does not present any significant difference with the reported ones, for what much of the following discussion has already been made in the above refrenced paper. In the present Nd complex the three crotonate ligands do not depart from expected geometries, the middle double bonds C2n═C3n (n=1,2,3) being distinctly shorter than the remaining two (mean values: <C1n—C2n>: 1.460 (4); <C2n—C3n>: 1.259 (5); <C3n—C4n>: 1.494 (5) Å), with the carboxylate ends presenting a significant resonance, as disclosed by the tight C—O span (1.231 (3)–1.268 (4) Å).
The dap molecule is planar within experimental error; and its overall geometry appears as featureless; the most attractive aspect of the molecule resides in its extreme involvement in H-bonding. In fact, the existence of a large number of efficient H-bonding donors and acceptors in the structure leads to a very complex intermolecular interaction scheme involving two sets of tightly interlinked, non intersecting H-bonded one-dimensional structures, one of them running along the crystallographic a direction and formed by the [Nd(crot)3(H2O)2]2 dimers; the second, evolving along b and formed by dap solvato molecules.
Both types of chains embed two sets of inversion centres. In the case of the dimeric chain shown in Fig.2, the same centre (site A1) which relates the two molecules in the dimer through a 4 atoms coordination loop also links them through a R22(8) H-bonded ring (Bernstein et al., 1995) almost at right angle to the former loop, viz., [(O11—Nd1—O1W—H1WA···)2] (in what follows, a 2 subindex in a loop formula will indicate duplication by centring and the ··· symbol, a H-bonding interaction). The second centre (site A2) inter-relates neighbouring dimers into chains through two centrosymmetric R22(8) motives (viz., [(O12—Nd1—O2W—H2WA···)2; (O2W—Nd1—O1W—H1WB···)2 respectively] and two, non centrosymmetric R22(6) ones flanking the former and involving just one neadimium cation each, namely (O12—Nd1—O1W—H1WB···O2W—H2WA···) and its centrosymmetric analogue.
A much simpler situation arises in the solvato chain (Fig. 3, hollow2 bonds in weak lining), which also contains two independent symmetry centres (noted as B1 and B2), and giving raise to just two, exactly similar centrosymmetric R22(8) motifs [(N3—C2—N2—H2A···)2. and (N1—C6—N6—H6A···)2]
The two perpendicular, non intersecting families of chains (the 'dimeric' one, running parallel to [100] at y ≈ z ≈ 0. and the 'solvato' one, parallel to [010] at x ≈ z ≈ 1/2) interact at their point of maximal approach through a variety of H-bonds in which there are donors and acceptors at both sides (Fig 3 and Table 1), and which determine four non-centrosymmetric (sites C1, C2, C3 and C4 in Fig. 3) and one centrosymmetric (site C5) H-bonded cycles, with Graph set descriptors R33(10); R44(14) (R22(7), R32(9) and R44(14), respectively.
There are also inter-dimeric interactions of the π···π type mediated by symmetry related crotonato double bonds, as in the case between C21═C31 and its (-x, 1 - y, -z) image, characterized by an intercentroid distance of 3.547 (1) Å and a slippage angle of 25.3 (1)°. These interactions link along the [001] direction the dimeric chains which run along [100].