research communications
of a bis-4-azatetracyclo[5.3.2.02,6.08,10]dodec-11-ene-3,5-dione compound
aDepartment of Chemistry, Grand Valley State University, Allendale, MI 49401, USA, and bCenter for Crystallographic Research, Department of Chemistry and Chemical Biology, Michigan State University, East Lansing, MI 48824, USA
*Correspondence e-mail: [email protected]
In the molecule of 4-({3-[(3,5-dioxo-4-azatetracyclo[5.3.2.02,6.08,10]dodec-11-en-4-yl)methyl]phenyl}methyl)-4-azatetracyclo[5.3.2.02,6.08,10]dodec-11-ene-3,5-dione, C30H28N2O4, which contains two substituted [2.2.2]bicyclooctene ring systems linked through a m-xylenediamine ring, the six-membered rings of the bicyclooctene ring systems adopt nearly perfect boat conformations as determined from Cremer–Pople analysis. Both ring systems are fused to a five-membered imide ring that is oriented endo to a bridgehead cyclopropyl ring. The features C=O⋯π interactions along with C—H⋯O hydrogen bonds.
CCDC reference: 2444823
1. Chemical context
The upper-level synthetic organic laboratory course at Grand Valley State University (GVSU) has exploited the chemistry of compound a for its ease of preparation (Kohler et al., 1939
; Kurtz & Johnson, 1989
), readily interpretable 1H, 13C, COSY and HSQC NMR spectra, and its reactivity with primary amines (Fig. 1
). The resulting imide products happen to be quite crystalline and we have reported the structures of three of these compounds in this journal (Hulsman et al., 2020
; Bajko et al., 2024
). Anhydride a has been used as a scaffold for the preparation of many new compounds, with one in particular earning approval as a treatment for smallpox (Tecovirimat; Bailey et al., 2007
; Hughes 2019
). We report here the crystal structure of a bis-imide derived from anhydride a where the [2.2.2]cyclooctene ring systems have been linked through a meta-xylenediamine core.
| | Figure 1 Reaction of anhydride (a) and m-xylenediamine to give compound I. |
2. Structural commentary
The structure of compound I is shown in Fig. 2
along with the atom-numbering scheme. The meta-methylene-substituted benzene ring (C13-C18) displays two structurally identical, yet crystallographically unique, 4-azatetracyclo[5.3.2.02,6.08,10]dodec-11-ene-3,5-dione ring systems. The bicyclo[2.2.2]cyclooctene ring systems within each tetracycle feature C=C bonds with distances of 1.333 (2) and 1.330 (2) Å for C6—C7 and C6A—C7A, respectively. The cyclohexene rings (C3—C8 and C3A—C8A) both adopt a nearly perfect boat conformation with Cremer–Pople puckering parameters of 89.89 (10) and 90.82 (11)° for φ and 299.84 (10) and 298.70 (11)° for θ (where φ = 90° and θ = 0° is an ideal boat; Cremer & Pople, 1975
). The imide rings (N1/C1/C3/C4/C2 and N1A/C1A/C3A/C4A/C2A) are oriented endo relative to the bridgehead carbons C9/C10 and C9A/C10A. The tetracyclic ring systems are oriented in nearly opposite directions relative to the planar benzene ring with a N1—C12—C19—N1A torsion angle of 135.89 (10)°.
| Figure 2 The molecular structure of compound I along with the atom-numbering scheme. Displacement ellipsoids are shown at the 50% probability level using standard CPK colors. |
3. Supramolecular features
Dimers of compound I are held together through one C=O⋯π interaction (Mooibroek et al., 2008
; Li et al., 2019
) and two C—H⋯O hydrogen bonds (Fig. 3
; Sutor, 1962
, 1963
; Steiner, 1996
). The C=O⋯π interaction C1=O1 and the centroid (Cg) of the imide N1A/C1A/C3A/C4A/C2A ring (symmetry code: −x + , y −
, z) has an O⋯Cg distance of 2.9964 (12) Å with a C=O⋯Cg angle of 141.18 (9)°. The C—H⋯O hydrogen bonds are present between C3A(H3A), C9A(H9A) and O2A (symmetry code: −x +
, y −
, z, Table 1
). Each carbonyl oxygen of the N1A/C1A/C3A/C4A/C2A imide ring hosts an additional C—H⋯O hydrogen bond that links the dimers into sheets that lie in the ab plane (Figs. 4
and 5
). These interactions are between atoms C9(H9) and O1A (symmetry code: x, y − 1, z) and C7A(H7A) and O2A (symmetry code: −x + 1, y + , −z +
).
|
| Figure 3 Depiction of the C=O⋯π interaction (orange, dotted line) and C—H⋯O hydrogen bonds (green, dashed lines) that form dimers of compound I in the solid state. This figure was drawn using a ball-and-stick model with standard CPK colors; only hydrogen atoms that are involved in a hydrogen bond are shown for clarity. Symmetry code: (i) −x + |
| Figure 4 The two additional intermolecular C—H⋯O hydrogen bonds (green, dashed lines) that are present in the crystal of compound I using a standard CPK colors and a ball-and-stick model. Only those hydrogen atoms are shown that are involved in a depicted hydrogen bond. Symmetry codes: (ii) x, y − 1, z; (iii) −x + 1, y + |
| Figure 5 A packing diagram of the crystal of compound I viewed down the b-axis showing the supramolecular sheets formed via intermolecular C=O⋯π interactions (orange, dotted lines) and C—H⋯O hydrogen bonds (green, dashed lines). Drawn using a ball-and-stick model with standard CPK colors, only hydrogen atoms involved in an interaction are shown for clarity. The outline of one is drawn with a pink, dashed line. |
4. Database survey
A search of the Cambridge Structural Database (CSD, version 5.45, updates through June 2024; Groom et al., 2016
) for structures containing a tricyclo[2.2.2.14,5]cyclononene ring system resulted in 31 hits. We highlight here three compounds that we found structurally interesting. Structure BOTZIW features four of these tricycles appended to the pyrrole rings of a porphyrin–PtII complex (Okujima et al., 2019
). In TPCDDD, the tricyclic ring system of the title compound is incorporated into a stunning trichloropentacyclodiene structure (Mock et al., 1972
). Lastly, Kaftory (1978
) crystallized a diadduct formed from two derivatives of the parent tricyclic ring system.
5. Synthesis and crystallization
The anhydride shown in Fig. 1
(205 mg, 1.08 mmol, Kohler et al., 1939
, Kurtz & Johnson, 1989
) was dissolved in 2.0 mL of xylenes in a vial at ambient temperature, then added to a round-bottom flask equipped with a magnetic stir bar. In a separate vial at ambient temperature, 0.1 mL (0.76 mmol) of m-xylenediamine were dissolved in 1.0 mL of xylenes and then transferred dropwise to the round-bottom flask. A precipitate formed immediately. The reaction mixture was heated to reflux using an oil bath for 30 minutes, allowed to cool to room temperature and diluted with 20 mL of hexanes. After standing overnight, the solid was isolated using a Hirsch funnel and recrystallized from hot water. After a few days, orange–yellowish needles appeared in the flask and were isolated. A percentage yield was not determined for this reaction as the amount of product obtained was quite small. Crystals suitable for X-ray diffraction were grown by layering a roughly equal volume of water on top of a dilute sample of the product in DMSO-d6 in an NMR tube and allowing the solution to sit for two weeks. LR-MS (ESI) m/z: [M + H]+ calculated for [C30H28N2O4H]+ 480.2; found, 480.8.
6. Refinement
Crystal data, data collection and structure details are summarized in Table 2
. All hydrogen atoms bonded to carbon atoms were placed in calculated positions and refined as riding: Uiso(H) = 1.2Ueq(C) for methylene, methine, aromatic and alkene groups.
|
Supporting information
CCDC reference: 2444823
contains datablock I. DOI: https://doi.org/10.1107/S2056989025003500/ny2012sup1.cif
Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2056989025003500/ny2012Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2056989025003500/ny2012Isup3.cml
| C30H28N2O4 | Dx = 1.396 Mg m−3 |
| Mr = 480.54 | Cu Kα radiation, λ = 1.54184 Å |
| Orthorhombic, Pbca | Cell parameters from 15558 reflections |
| a = 11.26039 (13) Å | θ = 2.7–79.2° |
| b = 12.26667 (15) Å | µ = 0.75 mm−1 |
| c = 33.0963 (3) Å | T = 100 K |
| V = 4571.51 (9) Å3 | Needle, colourless |
| Z = 8 | 0.22 × 0.10 × 0.04 mm |
| F(000) = 2032 |
| XtaLAB Synergy, Dualflex, HyPix diffractometer | 4946 independent reflections |
| Radiation source: micro-focus sealed X-ray tube, PhotonJet (Cu) X-ray Source | 4324 reflections with I > 2σ(I) |
| Mirror monochromator | Rint = 0.045 |
| Detector resolution: 10.0000 pixels mm-1 | θmax = 80.0°, θmin = 2.7° |
| ω scans | h = −14→14 |
| Absorption correction: gaussian (CrysAlisPro; Rigaku OD, 2024) | k = −15→15 |
| Tmin = 0.824, Tmax = 1.000 | l = −27→42 |
| 32235 measured reflections |
| Refinement on F2 | 0 restraints |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| R[F2 > 2σ(F2)] = 0.041 | H-atom parameters constrained |
| wR(F2) = 0.117 | w = 1/[σ2(Fo2) + (0.056P)2 + 1.9036P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.07 | (Δ/σ)max < 0.001 |
| 4946 reflections | Δρmax = 0.30 e Å−3 |
| 325 parameters | Δρmin = −0.21 e Å−3 |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| x | y | z | Uiso*/Ueq | ||
| O1 | 0.65542 (9) | 0.22161 (9) | 0.35506 (3) | 0.0280 (2) | |
| O2 | 0.64114 (9) | 0.24129 (8) | 0.49249 (3) | 0.0270 (2) | |
| N1 | 0.66306 (10) | 0.25121 (9) | 0.42358 (3) | 0.0214 (2) | |
| C1 | 0.62872 (12) | 0.19453 (11) | 0.38916 (4) | 0.0214 (3) | |
| C2 | 0.62238 (12) | 0.20430 (11) | 0.45908 (4) | 0.0213 (3) | |
| C3 | 0.55555 (12) | 0.09689 (11) | 0.40195 (4) | 0.0209 (3) | |
| H3 | 0.595702 | 0.028144 | 0.393166 | 0.025* | |
| C4 | 0.55262 (12) | 0.10284 (10) | 0.44859 (4) | 0.0203 (3) | |
| H4 | 0.592615 | 0.037261 | 0.460293 | 0.024* | |
| C5 | 0.42197 (12) | 0.10868 (11) | 0.46364 (4) | 0.0219 (3) | |
| H5 | 0.417830 | 0.115687 | 0.493710 | 0.026* | |
| C6 | 0.36415 (12) | 0.20413 (11) | 0.44290 (4) | 0.0239 (3) | |
| H6 | 0.328886 | 0.262805 | 0.457289 | 0.029* | |
| C7 | 0.36653 (12) | 0.19948 (11) | 0.40267 (4) | 0.0248 (3) | |
| H7 | 0.333527 | 0.254937 | 0.386074 | 0.030* | |
| C8 | 0.42562 (12) | 0.09943 (11) | 0.38556 (4) | 0.0228 (3) | |
| H8 | 0.423454 | 0.098893 | 0.355357 | 0.027* | |
| C9 | 0.36814 (12) | −0.00344 (11) | 0.40349 (4) | 0.0243 (3) | |
| H9 | 0.390834 | −0.074758 | 0.391057 | 0.029* | |
| C10 | 0.36600 (12) | 0.00170 (11) | 0.44909 (4) | 0.0236 (3) | |
| H10 | 0.387699 | −0.066222 | 0.464081 | 0.028* | |
| C11 | 0.25107 (13) | 0.00056 (12) | 0.42566 (4) | 0.0274 (3) | |
| H11A | 0.204812 | 0.069108 | 0.424354 | 0.033* | |
| H11B | 0.202722 | −0.066814 | 0.426447 | 0.033* | |
| C12 | 0.73641 (12) | 0.34996 (11) | 0.42292 (4) | 0.0240 (3) | |
| H12A | 0.785149 | 0.350056 | 0.398026 | 0.029* | |
| H12B | 0.791177 | 0.348634 | 0.446316 | 0.029* | |
| C13 | 0.66361 (12) | 0.45373 (11) | 0.42439 (4) | 0.0223 (3) | |
| C14 | 0.61529 (12) | 0.49699 (11) | 0.38902 (4) | 0.0226 (3) | |
| H14 | 0.628213 | 0.460844 | 0.364018 | 0.027* | |
| C15 | 0.54809 (12) | 0.59283 (11) | 0.38990 (4) | 0.0227 (3) | |
| C16 | 0.53009 (13) | 0.64554 (12) | 0.42667 (4) | 0.0263 (3) | |
| H16 | 0.485926 | 0.711479 | 0.427569 | 0.032* | |
| C17 | 0.57654 (14) | 0.60192 (12) | 0.46204 (4) | 0.0294 (3) | |
| H17 | 0.562699 | 0.637477 | 0.487103 | 0.035* | |
| C18 | 0.64301 (13) | 0.50677 (12) | 0.46097 (4) | 0.0263 (3) | |
| H18 | 0.674638 | 0.477605 | 0.485287 | 0.032* | |
| C19 | 0.49046 (12) | 0.63590 (11) | 0.35169 (4) | 0.0243 (3) | |
| H19A | 0.451709 | 0.574514 | 0.337436 | 0.029* | |
| H19B | 0.427710 | 0.688583 | 0.359291 | 0.029* | |
| O1A | 0.54311 (10) | 0.86502 (8) | 0.34502 (3) | 0.0302 (2) | |
| O2A | 0.63097 (10) | 0.53584 (8) | 0.28983 (3) | 0.0315 (2) | |
| N1A | 0.57312 (10) | 0.68934 (9) | 0.32389 (3) | 0.0214 (2) | |
| C1A | 0.58996 (12) | 0.80106 (11) | 0.32221 (4) | 0.0219 (3) | |
| C2A | 0.63556 (12) | 0.63386 (11) | 0.29434 (4) | 0.0229 (3) | |
| C3A | 0.67160 (12) | 0.82669 (11) | 0.28732 (4) | 0.0214 (3) | |
| H3A | 0.744287 | 0.865214 | 0.297186 | 0.026* | |
| C4A | 0.70497 (12) | 0.71488 (11) | 0.26934 (4) | 0.0215 (3) | |
| H4A | 0.792121 | 0.701612 | 0.272446 | 0.026* | |
| C5A | 0.66956 (13) | 0.71028 (11) | 0.22382 (4) | 0.0238 (3) | |
| H5A | 0.689249 | 0.638089 | 0.211481 | 0.029* | |
| C6A | 0.53899 (13) | 0.73366 (12) | 0.22192 (4) | 0.0258 (3) | |
| H6A | 0.483456 | 0.684407 | 0.210359 | 0.031* | |
| C7A | 0.50724 (13) | 0.82896 (12) | 0.23773 (4) | 0.0260 (3) | |
| H7A | 0.427000 | 0.852806 | 0.238485 | 0.031* | |
| C8A | 0.60774 (13) | 0.89626 (11) | 0.25435 (4) | 0.0239 (3) | |
| H8A | 0.579303 | 0.967581 | 0.265335 | 0.029* | |
| C9A | 0.70274 (13) | 0.91170 (12) | 0.22165 (4) | 0.0265 (3) | |
| H9A | 0.767960 | 0.964581 | 0.227680 | 0.032* | |
| C10A | 0.73880 (13) | 0.80335 (12) | 0.20376 (4) | 0.0262 (3) | |
| H10A | 0.825524 | 0.791281 | 0.199034 | 0.031* | |
| C11A | 0.67816 (15) | 0.88829 (12) | 0.17785 (4) | 0.0301 (3) | |
| H11C | 0.726822 | 0.926744 | 0.157413 | 0.036* | |
| H11D | 0.594763 | 0.874818 | 0.169802 | 0.036* |
| U11 | U22 | U33 | U12 | U13 | U23 | |
| O1 | 0.0300 (5) | 0.0369 (6) | 0.0171 (4) | −0.0039 (4) | 0.0019 (4) | 0.0026 (4) |
| O2 | 0.0357 (5) | 0.0285 (5) | 0.0168 (4) | −0.0029 (4) | −0.0039 (4) | −0.0007 (4) |
| N1 | 0.0236 (5) | 0.0237 (5) | 0.0169 (5) | −0.0009 (4) | −0.0013 (4) | 0.0019 (4) |
| C1 | 0.0208 (6) | 0.0259 (6) | 0.0174 (6) | 0.0022 (5) | −0.0004 (5) | 0.0004 (5) |
| C2 | 0.0234 (6) | 0.0227 (6) | 0.0178 (6) | 0.0024 (5) | −0.0014 (5) | 0.0023 (5) |
| C3 | 0.0242 (6) | 0.0227 (6) | 0.0159 (6) | 0.0011 (5) | 0.0009 (5) | −0.0004 (4) |
| C4 | 0.0252 (6) | 0.0207 (6) | 0.0151 (5) | 0.0014 (5) | −0.0009 (5) | 0.0017 (4) |
| C5 | 0.0271 (6) | 0.0224 (6) | 0.0161 (5) | 0.0002 (5) | 0.0024 (5) | 0.0006 (5) |
| C6 | 0.0245 (6) | 0.0217 (6) | 0.0256 (7) | 0.0019 (5) | 0.0029 (5) | −0.0011 (5) |
| C7 | 0.0240 (6) | 0.0249 (6) | 0.0255 (6) | 0.0018 (5) | −0.0015 (5) | 0.0059 (5) |
| C8 | 0.0258 (6) | 0.0278 (7) | 0.0149 (5) | −0.0008 (5) | −0.0005 (5) | 0.0005 (5) |
| C9 | 0.0270 (7) | 0.0252 (6) | 0.0208 (6) | −0.0026 (5) | −0.0003 (5) | −0.0028 (5) |
| C10 | 0.0268 (7) | 0.0241 (6) | 0.0197 (6) | −0.0016 (5) | 0.0011 (5) | 0.0024 (5) |
| C11 | 0.0265 (7) | 0.0298 (7) | 0.0257 (6) | −0.0043 (5) | 0.0007 (5) | 0.0008 (5) |
| C12 | 0.0240 (6) | 0.0249 (7) | 0.0230 (6) | −0.0027 (5) | −0.0015 (5) | 0.0025 (5) |
| C13 | 0.0220 (6) | 0.0227 (6) | 0.0221 (6) | −0.0051 (5) | 0.0011 (5) | 0.0019 (5) |
| C14 | 0.0256 (6) | 0.0243 (6) | 0.0179 (6) | −0.0035 (5) | 0.0021 (5) | 0.0003 (5) |
| C15 | 0.0228 (6) | 0.0245 (6) | 0.0209 (6) | −0.0046 (5) | 0.0025 (5) | 0.0026 (5) |
| C16 | 0.0272 (7) | 0.0242 (7) | 0.0275 (7) | −0.0023 (5) | 0.0035 (5) | −0.0022 (5) |
| C17 | 0.0350 (7) | 0.0323 (7) | 0.0208 (6) | −0.0054 (6) | 0.0040 (5) | −0.0063 (5) |
| C18 | 0.0300 (7) | 0.0296 (7) | 0.0192 (6) | −0.0061 (6) | −0.0006 (5) | 0.0013 (5) |
| C19 | 0.0233 (6) | 0.0263 (6) | 0.0234 (6) | −0.0015 (5) | 0.0012 (5) | 0.0042 (5) |
| O1A | 0.0408 (6) | 0.0263 (5) | 0.0234 (5) | 0.0027 (4) | 0.0073 (4) | −0.0045 (4) |
| O2A | 0.0453 (6) | 0.0211 (5) | 0.0281 (5) | 0.0023 (4) | 0.0044 (4) | −0.0010 (4) |
| N1A | 0.0245 (5) | 0.0213 (5) | 0.0182 (5) | 0.0002 (4) | 0.0012 (4) | 0.0006 (4) |
| C1A | 0.0265 (6) | 0.0218 (6) | 0.0173 (6) | −0.0001 (5) | −0.0032 (5) | −0.0007 (5) |
| C2A | 0.0265 (6) | 0.0238 (6) | 0.0185 (6) | 0.0031 (5) | −0.0024 (5) | −0.0005 (5) |
| C3A | 0.0255 (6) | 0.0216 (6) | 0.0172 (6) | −0.0013 (5) | −0.0006 (5) | −0.0015 (5) |
| C4A | 0.0227 (6) | 0.0235 (6) | 0.0182 (6) | 0.0021 (5) | −0.0001 (5) | 0.0001 (5) |
| C5A | 0.0302 (7) | 0.0237 (6) | 0.0174 (6) | 0.0018 (5) | −0.0004 (5) | −0.0019 (5) |
| C6A | 0.0285 (7) | 0.0303 (7) | 0.0186 (6) | −0.0033 (5) | −0.0040 (5) | 0.0007 (5) |
| C7A | 0.0255 (7) | 0.0325 (7) | 0.0200 (6) | 0.0040 (6) | −0.0016 (5) | 0.0037 (5) |
| C8A | 0.0303 (7) | 0.0215 (6) | 0.0199 (6) | 0.0025 (5) | −0.0001 (5) | 0.0012 (5) |
| C9A | 0.0331 (7) | 0.0271 (7) | 0.0193 (6) | −0.0029 (6) | 0.0003 (5) | 0.0024 (5) |
| C10A | 0.0289 (7) | 0.0310 (7) | 0.0185 (6) | −0.0001 (6) | 0.0013 (5) | 0.0004 (5) |
| C11A | 0.0397 (8) | 0.0312 (7) | 0.0195 (6) | −0.0004 (6) | 0.0022 (6) | 0.0035 (5) |
| O1—C1 | 1.2142 (16) | C15—C19 | 1.5162 (18) |
| O2—C2 | 1.2137 (16) | C16—H16 | 0.9500 |
| N1—C1 | 1.3895 (17) | C16—C17 | 1.389 (2) |
| N1—C2 | 1.3861 (16) | C17—H17 | 0.9500 |
| N1—C12 | 1.4662 (17) | C17—C18 | 1.387 (2) |
| C1—C3 | 1.5141 (18) | C18—H18 | 0.9500 |
| C2—C4 | 1.5122 (18) | C19—H19A | 0.9900 |
| C3—H3 | 1.0000 | C19—H19B | 0.9900 |
| C3—C4 | 1.5458 (17) | C19—N1A | 1.4640 (17) |
| C3—C8 | 1.5605 (18) | O1A—C1A | 1.2098 (17) |
| C4—H4 | 1.0000 | O2A—C2A | 1.2127 (17) |
| C4—C5 | 1.5548 (18) | N1A—C1A | 1.3845 (17) |
| C5—H5 | 1.0000 | N1A—C2A | 1.3834 (17) |
| C5—C6 | 1.5052 (18) | C1A—C3A | 1.5093 (18) |
| C5—C10 | 1.5334 (18) | C2A—C4A | 1.5110 (19) |
| C6—H6 | 0.9500 | C3A—H3A | 1.0000 |
| C6—C7 | 1.333 (2) | C3A—C4A | 1.5415 (18) |
| C7—H7 | 0.9500 | C3A—C8A | 1.5606 (18) |
| C7—C8 | 1.5065 (19) | C4A—H4A | 1.0000 |
| C8—H8 | 1.0000 | C4A—C5A | 1.5596 (17) |
| C8—C9 | 1.5373 (19) | C5A—H5A | 1.0000 |
| C9—H9 | 1.0000 | C5A—C6A | 1.499 (2) |
| C9—C10 | 1.5108 (18) | C5A—C10A | 1.5336 (19) |
| C9—C11 | 1.5095 (19) | C6A—H6A | 0.9500 |
| C10—H10 | 1.0000 | C6A—C7A | 1.330 (2) |
| C10—C11 | 1.509 (2) | C7A—H7A | 0.9500 |
| C11—H11A | 0.9900 | C7A—C8A | 1.505 (2) |
| C11—H11B | 0.9900 | C8A—H8A | 1.0000 |
| C12—H12A | 0.9900 | C8A—C9A | 1.5335 (19) |
| C12—H12B | 0.9900 | C9A—H9A | 1.0000 |
| C12—C13 | 1.5149 (19) | C9A—C10A | 1.511 (2) |
| C13—C14 | 1.3958 (18) | C9A—C11A | 1.5035 (18) |
| C13—C18 | 1.3938 (19) | C10A—H10A | 1.0000 |
| C14—H14 | 0.9500 | C10A—C11A | 1.512 (2) |
| C14—C15 | 1.3984 (19) | C11A—H11C | 0.9900 |
| C15—C16 | 1.3930 (19) | C11A—H11D | 0.9900 |
| C1—N1—C12 | 123.91 (11) | C15—C16—H16 | 119.9 |
| C2—N1—C1 | 113.28 (11) | C17—C16—C15 | 120.18 (14) |
| C2—N1—C12 | 122.80 (11) | C17—C16—H16 | 119.9 |
| O1—C1—N1 | 123.80 (13) | C16—C17—H17 | 119.8 |
| O1—C1—C3 | 127.65 (12) | C18—C17—C16 | 120.38 (13) |
| N1—C1—C3 | 108.55 (10) | C18—C17—H17 | 119.8 |
| O2—C2—N1 | 124.02 (12) | C13—C18—H18 | 119.8 |
| O2—C2—C4 | 127.39 (12) | C17—C18—C13 | 120.32 (13) |
| N1—C2—C4 | 108.59 (11) | C17—C18—H18 | 119.8 |
| C1—C3—H3 | 109.9 | C15—C19—H19A | 108.7 |
| C1—C3—C4 | 104.68 (10) | C15—C19—H19B | 108.7 |
| C1—C3—C8 | 113.41 (10) | H19A—C19—H19B | 107.6 |
| C4—C3—H3 | 109.9 | N1A—C19—C15 | 114.09 (11) |
| C4—C3—C8 | 109.03 (10) | N1A—C19—H19A | 108.7 |
| C8—C3—H3 | 109.9 | N1A—C19—H19B | 108.7 |
| C2—C4—C3 | 104.89 (10) | C1A—N1A—C19 | 123.74 (11) |
| C2—C4—H4 | 109.8 | C2A—N1A—C19 | 123.18 (11) |
| C2—C4—C5 | 112.34 (10) | C2A—N1A—C1A | 112.90 (11) |
| C3—C4—H4 | 109.8 | O1A—C1A—N1A | 123.87 (13) |
| C3—C4—C5 | 110.02 (10) | O1A—C1A—C3A | 127.44 (12) |
| C5—C4—H4 | 109.8 | N1A—C1A—C3A | 108.67 (11) |
| C4—C5—H5 | 111.5 | O2A—C2A—N1A | 123.57 (13) |
| C6—C5—C4 | 107.40 (10) | O2A—C2A—C4A | 127.37 (12) |
| C6—C5—H5 | 111.5 | N1A—C2A—C4A | 109.05 (11) |
| C6—C5—C10 | 110.16 (11) | C1A—C3A—H3A | 110.3 |
| C10—C5—C4 | 104.41 (10) | C1A—C3A—C4A | 104.98 (10) |
| C10—C5—H5 | 111.5 | C1A—C3A—C8A | 111.61 (11) |
| C5—C6—H6 | 122.8 | C4A—C3A—H3A | 110.3 |
| C7—C6—C5 | 114.43 (12) | C4A—C3A—C8A | 109.21 (10) |
| C7—C6—H6 | 122.8 | C8A—C3A—H3A | 110.3 |
| C6—C7—H7 | 122.6 | C2A—C4A—C3A | 104.35 (10) |
| C6—C7—C8 | 114.78 (12) | C2A—C4A—H4A | 110.1 |
| C8—C7—H7 | 122.6 | C2A—C4A—C5A | 111.89 (11) |
| C3—C8—H8 | 111.7 | C3A—C4A—H4A | 110.1 |
| C7—C8—C3 | 107.44 (11) | C3A—C4A—C5A | 110.04 (10) |
| C7—C8—H8 | 111.7 | C5A—C4A—H4A | 110.1 |
| C7—C8—C9 | 109.73 (11) | C4A—C5A—H5A | 111.7 |
| C9—C8—C3 | 104.14 (10) | C6A—C5A—C4A | 106.52 (11) |
| C9—C8—H8 | 111.7 | C6A—C5A—H5A | 111.7 |
| C8—C9—H9 | 116.8 | C6A—C5A—C10A | 109.76 (11) |
| C10—C9—C8 | 110.98 (11) | C10A—C5A—C4A | 105.14 (11) |
| C10—C9—H9 | 116.8 | C10A—C5A—H5A | 111.7 |
| C11—C9—C8 | 121.91 (12) | C5A—C6A—H6A | 122.7 |
| C11—C9—H9 | 116.8 | C7A—C6A—C5A | 114.54 (13) |
| C11—C9—C10 | 59.94 (9) | C7A—C6A—H6A | 122.7 |
| C5—C10—H10 | 117.2 | C6A—C7A—H7A | 122.5 |
| C9—C10—C5 | 110.05 (11) | C6A—C7A—C8A | 115.08 (13) |
| C9—C10—H10 | 117.2 | C8A—C7A—H7A | 122.5 |
| C11—C10—C5 | 121.46 (12) | C3A—C8A—H8A | 111.8 |
| C11—C10—C9 | 59.99 (9) | C7A—C8A—C3A | 107.58 (11) |
| C11—C10—H10 | 117.2 | C7A—C8A—H8A | 111.8 |
| C9—C11—H11A | 117.8 | C7A—C8A—C9A | 109.53 (11) |
| C9—C11—H11B | 117.8 | C9A—C8A—C3A | 103.86 (11) |
| C10—C11—C9 | 60.07 (9) | C9A—C8A—H8A | 111.8 |
| C10—C11—H11A | 117.8 | C8A—C9A—H9A | 116.8 |
| C10—C11—H11B | 117.8 | C10A—C9A—C8A | 110.82 (11) |
| H11A—C11—H11B | 114.9 | C10A—C9A—H9A | 116.8 |
| N1—C12—H12A | 109.0 | C11A—C9A—C8A | 121.91 (13) |
| N1—C12—H12B | 109.0 | C11A—C9A—H9A | 116.8 |
| N1—C12—C13 | 112.89 (11) | C11A—C9A—C10A | 60.24 (9) |
| H12A—C12—H12B | 107.8 | C5A—C10A—H10A | 117.0 |
| C13—C12—H12A | 109.0 | C9A—C10A—C5A | 110.41 (11) |
| C13—C12—H12B | 109.0 | C9A—C10A—H10A | 117.0 |
| C14—C13—C12 | 120.23 (12) | C9A—C10A—C11A | 59.65 (9) |
| C18—C13—C12 | 120.68 (12) | C11A—C10A—C5A | 121.92 (13) |
| C18—C13—C14 | 119.09 (13) | C11A—C10A—H10A | 117.0 |
| C13—C14—H14 | 119.6 | C9A—C11A—C10A | 60.11 (9) |
| C13—C14—C15 | 120.87 (12) | C9A—C11A—H11C | 117.8 |
| C15—C14—H14 | 119.6 | C9A—C11A—H11D | 117.8 |
| C14—C15—C19 | 120.48 (12) | C10A—C11A—H11C | 117.8 |
| C16—C15—C14 | 119.15 (12) | C10A—C11A—H11D | 117.8 |
| C16—C15—C19 | 120.31 (13) | H11C—C11A—H11D | 114.9 |
| O1—C1—C3—C4 | 179.09 (13) | C14—C15—C16—C17 | −1.2 (2) |
| O1—C1—C3—C8 | −62.18 (18) | C14—C15—C19—N1A | −76.21 (16) |
| O2—C2—C4—C3 | 178.79 (13) | C15—C16—C17—C18 | 1.2 (2) |
| O2—C2—C4—C5 | 59.30 (17) | C15—C19—N1A—C1A | −97.03 (15) |
| N1—C1—C3—C4 | −0.66 (14) | C15—C19—N1A—C2A | 88.29 (15) |
| N1—C1—C3—C8 | 118.07 (11) | C16—C15—C19—N1A | 106.82 (14) |
| N1—C2—C4—C3 | −0.93 (14) | C16—C17—C18—C13 | −0.2 (2) |
| N1—C2—C4—C5 | −120.42 (11) | C18—C13—C14—C15 | 0.7 (2) |
| N1—C12—C13—C14 | −83.59 (15) | C19—C15—C16—C17 | 175.77 (13) |
| N1—C12—C13—C18 | 95.83 (15) | C19—N1A—C1A—O1A | 4.3 (2) |
| C1—N1—C2—O2 | −179.17 (13) | C19—N1A—C1A—C3A | −174.23 (11) |
| C1—N1—C2—C4 | 0.56 (15) | C19—N1A—C2A—O2A | −2.9 (2) |
| C1—N1—C12—C13 | 95.96 (15) | C19—N1A—C2A—C4A | 175.83 (11) |
| C1—C3—C4—C2 | 0.94 (13) | O1A—C1A—C3A—C4A | 179.52 (13) |
| C1—C3—C4—C5 | 121.97 (11) | O1A—C1A—C3A—C8A | −62.29 (18) |
| C1—C3—C8—C7 | −61.47 (13) | O2A—C2A—C4A—C3A | 176.86 (14) |
| C1—C3—C8—C9 | −177.84 (10) | O2A—C2A—C4A—C5A | 57.92 (19) |
| C2—N1—C1—O1 | −179.68 (13) | N1A—C1A—C3A—C4A | −2.04 (14) |
| C2—N1—C1—C3 | 0.08 (15) | N1A—C1A—C3A—C8A | 116.15 (12) |
| C2—N1—C12—C13 | −84.97 (15) | N1A—C2A—C4A—C3A | −1.85 (14) |
| C2—C4—C5—C6 | 61.26 (13) | N1A—C2A—C4A—C5A | −120.80 (12) |
| C2—C4—C5—C10 | 178.23 (10) | C1A—N1A—C2A—O2A | −178.14 (13) |
| C3—C4—C5—C6 | −55.19 (13) | C1A—N1A—C2A—C4A | 0.63 (15) |
| C3—C4—C5—C10 | 61.77 (12) | C1A—C3A—C4A—C2A | 2.29 (13) |
| C3—C8—C9—C10 | 62.45 (13) | C1A—C3A—C4A—C5A | 122.48 (11) |
| C3—C8—C9—C11 | 129.29 (12) | C1A—C3A—C8A—C7A | −62.90 (14) |
| C4—C3—C8—C7 | 54.72 (13) | C1A—C3A—C8A—C9A | −178.96 (11) |
| C4—C3—C8—C9 | −61.65 (12) | C2A—N1A—C1A—O1A | 179.45 (13) |
| C4—C5—C6—C7 | 57.67 (15) | C2A—N1A—C1A—C3A | 0.93 (15) |
| C4—C5—C10—C9 | −62.34 (13) | C2A—C4A—C5A—C6A | 58.52 (14) |
| C4—C5—C10—C11 | −128.70 (12) | C2A—C4A—C5A—C10A | 174.98 (11) |
| C5—C6—C7—C8 | 0.46 (18) | C3A—C4A—C5A—C6A | −57.00 (14) |
| C5—C10—C11—C9 | 96.36 (13) | C3A—C4A—C5A—C10A | 59.46 (14) |
| C6—C5—C10—C9 | 52.70 (14) | C3A—C8A—C9A—C10A | 62.70 (14) |
| C6—C5—C10—C11 | −13.66 (16) | C3A—C8A—C9A—C11A | 129.81 (13) |
| C6—C7—C8—C3 | −58.46 (15) | C4A—C3A—C8A—C7A | 52.73 (14) |
| C6—C7—C8—C9 | 54.16 (16) | C4A—C3A—C8A—C9A | −63.33 (13) |
| C7—C8—C9—C10 | −52.31 (14) | C4A—C5A—C6A—C7A | 58.06 (15) |
| C7—C8—C9—C11 | 14.54 (17) | C4A—C5A—C10A—C9A | −61.42 (14) |
| C8—C3—C4—C2 | −120.71 (11) | C4A—C5A—C10A—C11A | −127.63 (13) |
| C8—C3—C4—C5 | 0.32 (14) | C5A—C6A—C7A—C8A | 0.41 (17) |
| C8—C9—C10—C5 | 0.10 (15) | C5A—C10A—C11A—C9A | 96.39 (14) |
| C8—C9—C10—C11 | 115.61 (13) | C6A—C5A—C10A—C9A | 52.79 (14) |
| C8—C9—C11—C10 | −97.29 (13) | C6A—C5A—C10A—C11A | −13.42 (17) |
| C10—C5—C6—C7 | −55.47 (16) | C6A—C7A—C8A—C3A | −58.00 (15) |
| C11—C9—C10—C5 | −115.51 (13) | C6A—C7A—C8A—C9A | 54.27 (15) |
| C12—N1—C1—O1 | −0.5 (2) | C7A—C8A—C9A—C10A | −51.98 (15) |
| C12—N1—C1—C3 | 179.24 (12) | C7A—C8A—C9A—C11A | 15.13 (18) |
| C12—N1—C2—O2 | 1.7 (2) | C8A—C3A—C4A—C2A | −117.51 (11) |
| C12—N1—C2—C4 | −178.61 (11) | C8A—C3A—C4A—C5A | 2.69 (15) |
| C12—C13—C14—C15 | −179.88 (12) | C8A—C9A—C10A—C5A | −0.12 (16) |
| C12—C13—C18—C17 | 179.82 (13) | C8A—C9A—C10A—C11A | 115.72 (14) |
| C13—C14—C15—C16 | 0.3 (2) | C8A—C9A—C11A—C10A | −97.25 (15) |
| C13—C14—C15—C19 | −176.71 (12) | C10A—C5A—C6A—C7A | −55.27 (15) |
| C14—C13—C18—C17 | −0.8 (2) | C11A—C9A—C10A—C5A | −115.84 (13) |
| D—H···A | D—H | H···A | D···A | D—H···A |
| C3A—H3A···O2Ai | 1.00 | 2.53 | 3.3958 (17) | 144 |
| C9A—H9A···O2Ai | 1.00 | 2.51 | 3.3041 (17) | 136 |
| C9—H9···O1Aii | 1.00 | 2.41 | 3.1985 (17) | 135 |
| C7A—H7A···O2Aiii | 0.95 | 2.52 | 3.1135 (18) | 121 |
| Symmetry codes: (i) −x+3/2, y+1/2, z; (ii) x, y−1, z; (iii) −x+1, y+1/2, −z+1/2. |
Acknowledgements
We are grateful to GVSU's Weldon Fund for financial support of this work. We thank Dr Randy Winchester (GVSU) for sharing these experiments with the Fall 2024 CHM 480 course, Dr Stephanie Billinovich (GVSU) for help with instrumentation, and Brianna Gordon for her wisdom and support as a TA for this course.
References
Bailey, T. R., Rippin, S. R., Opsitnick, E., Burns, C. J., Pevear, D. C., Collett, M. S., Rhodes, G., Tohan, S., Huggins, J. W., Baker, R. O., Kern, E. R., Keith, K. A., Dai, D., Yang, G., Hruby, D. & Jordan, R. (2007). J. Med. Chem. 50, 1442–1444. Web of Science CSD CrossRef PubMed CAS Google Scholar
Bajko, J. P., Staples, R. J. & Biros, S. M. (2024). Acta Cryst. E80, 1318–1321. CSD CrossRef IUCr Journals Google Scholar
Bourhis, L. J., Dolomanov, O. V., Gildea, R. J., Howard, J. A. K. & Puschmann, H. (2015). Acta Cryst. A71, 59–75. Web of Science CrossRef IUCr Journals Google Scholar
Cremer, D. & Pople, J. A. (1975). J. Am. Chem. Soc. 97, 1354–1358. CrossRef CAS Web of Science Google Scholar
Dolomanov, O. V., Bourhis, L. J., Gildea, R. J., Howard, J. A. K. & Puschmann, H. (2009). J. Appl. Cryst. 42, 339–341. Web of Science CrossRef CAS IUCr Journals Google Scholar
Groom, C. R., Bruno, I. J., Lightfoot, M. P. & Ward, S. C. (2016). Acta Cryst. B72, 171–179. Web of Science CrossRef IUCr Journals Google Scholar
Hughes, D. L. (2019). Org. Process Res. Dev. 23, 1298–1307. Web of Science CrossRef CAS Google Scholar
Hulsman, A., Lorenzana, I., Schultz, T., Squires, B., Stenfors, B. A., Tolonen, M., Staples, R. J., Biros, S. M. & Winchester, W. R. (2020). Acta Cryst. E76, 1311–1315. Web of Science CSD CrossRef IUCr Journals Google Scholar
Kaftory, M. (1978). Acta Cryst. B34, 306–308. CSD CrossRef CAS IUCr Journals Google Scholar
Kohler, E. P., Tishler, M., Potter, H. & Thompson, H. (1939). J. Am. Chem. Soc. 61, 1057–1061. CrossRef CAS Google Scholar
Kurtz, D. W. & Johnson, R. P. (1989). J. Chem. Educ. 66, 873–874. CrossRef CAS Web of Science Google Scholar
Li, P., Vik, E. C., Maier, J. M., Karki, I., Strickland, S. M. S., Umana, J. M., Smith, M. D., Pellechia, P. J. & Shimizu, K. D. (2019). J. Am. Chem. Soc. 141, 12513–12517. Web of Science CSD CrossRef CAS PubMed Google Scholar
Mock, W. L., Sprecher, C. M., Stewart, R. F. & Northolt, M. G. (1972). J. Am. Chem. Soc. 94, 2015–2020. CSD CrossRef CAS Google Scholar
Mooibroek, T. J., Gamez, P. & Reedijk, J. (2008). CrystEngComm, 10, 1501–1515. Web of Science CrossRef CAS Google Scholar
Okujima, T., Hashimoto, Y., Furuta, T., Yamanaka, R., Jin, G., Otsubo, S., Aramaki, S., Mori, S., Yamada, H., Uno, H. & Ono, N. (2019). Bull. Chem. Soc. Jpn, 92, 1370–1378. CSD CrossRef CAS Google Scholar
Palmer, D. (2007). Crystal Maker. CrystalMaker Software, Bicester, England. Google Scholar
Rigaku OD (2024). CrysAlis PRO. Rigaku Oxford Diffraction, Yarnton, England. Google Scholar
Sheldrick, G. M. (2015a). Acta Cryst. A71, 3–8. Web of Science CrossRef IUCr Journals Google Scholar
Sheldrick, G. M. (2015b). Acta Cryst. C71, 3–8. Web of Science CrossRef IUCr Journals Google Scholar
Steiner, T. (1996). Crystallogr. Rev. 6, 1–51. CrossRef CAS Google Scholar
Sutor, D. J. (1962). Nature, 195, 68–69. CAS Google Scholar
Sutor, D. J. (1963). J. Chem. Soc. pp. 1105–1110. CrossRef Web of Science Google Scholar
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