research communications
and Hirshfeld surface analysis of (Z)-N′-(4-methoxybenzo[d]thiazol-2-yl)-3,6-di-p-tolyl-1,2,4-triazine-5-carboximidamide
aThe Ural Federal University, named after the first president of Russia, B. N. Yeltsin, Mira. 19 st., 620002, Yekaterinburg, Russian Federation, bPostovsky Institute of Organic Synthesis, Ural Branch of the Russian Academy of Sciences, Sof'i Kovalevskoy 22 st., 620137, Yekaterinburg, Russian Federation, cSirius University of Science and Technology, Olympic Avenue 1, 354340, Sirius Federal Territory, Russian Federation, dM. N. Mikheev Institute of Metal Physics of the Ural Branch of the Russian Academy of Sciences, Sof'i Kovalevskoy 18 st., 620108, Yekaterinburg, Russian Federation, eAzerbaijan State Pedagogical University, 68 Uzeyir Hajibeyov St., AZ 1000, Baku, Azerbaijan, fDepartment of Physics, Faculty of Sciences, Erciyes University, 38039 Kayseri, Türkiye, gDepartment of Chemistry, University of Gondar, PO Box 196, Gondar, Ethiopia, and hAzerbaijan Medical University, Scientific Research Centre (SRC), A. Kasumzade St. 14, AZ 1022, Baku, Azerbaijan
*Correspondence e-mail: [email protected]
The title molecule, C26H22N6OS, has a stable conformation due to two intramolecular N—H⋯·N hydrogen bonds that produce fused S(5) and S(6) rings. Layers parallel to the (010) plane are formed in the crystal by intermolecular C—H⋯O and C—H⋯N hydrogen bonding. Additionally, C—H⋯π and π–π [centroid-to-centroid distance = 3.7380 (12) Å] interactions link the molecules, creating ribbons along the a-axis direction. The intermolecular interactions were quantified using Hirshfeld surface analysis and two-dimensional fingerprint plots, which revealed the relative contributions of H⋯H (48.6%), C⋯H/H⋯C (18.8%), and N⋯H/H⋯N (12.0%) contacts to the crystal packing.
Keywords: crystal structure; 1,3-benzothiazole; 1,2,4-triazine; hydrogen bonds; Hirshfeld surface analysis.
CCDC reference: 2389378
1. Chemical context
Heterocyclic amidine derivatives of benzothiazole are notable pharmacophores with anti-inflammatory (Sondhi et al., 2011
; Racane et al., 2023
) and neuroprotective (Anzini et al., 2010
) activities. In recent years, benzothiazole-triazine hybrid molecules have been reported as potent anti-tumor agents (Kumar et al., 2015
) and COX-2 inhibitors (Ertas et al., 2022
).
Previously, we have developed a method for modification of 5-cyano-1,2,4-triazines with heterocyclic via a nucleophilic ipso-substitution reaction (Krinochkin et al., 2022
; Rammohan et al., 2021
), thus as our next step we have tried to apply 2-aminobenzothiazoles to this methodology. It was found that solvent-free interaction of 3,6-di-p-tolyl-1,2,4-triazine-5-carbonitrile (1) with 4-methoxybenzo[d]thiazol-2-amine (2) at 423 K leads to the product (Z)-N′-(4-methoxybenzo[d]thiazol-2-yl)-3,6-di-p-tolyl-1,2,4-triazine-5-carboximidamide (3). There is six-membered intramolecular resonance-assisted hydrogen bonding in the crystal structure of (3), which can be used in molecular recognition (Mahmudov & Pombeiro, 2016
).
2. Structural commentary
As shown Fig. 1
, the conformation of the title molecule is stabilized by two intramolecular N—H⋯N hydrogen bonds, forming fused S(5) and S(6) rings (Table 1
; Bernstein et al., 1995
). In a six-membered resonance-assisted hydrogen-bonding (RAHB) ring, the N3—H3B⋯N1 bond with [N⋯N distance = 2.663 (3) Å] falls in the N⋯N distance range [2.542–2.897 Å] observed for other supramolecular synthons (Gurbanov et al., 2020
), and indicates a low delocalization within the heterodienic moiety. The N—H⋯N angle of 128 (2)° differs significantly from the average O—H⋯O angle (149°; Bertolasi et al., 1993
) of β-diketone enols involved in similar intramolecular RAHB.
|
| Figure 1 Molecular structure of the title compound showing the atomic labelling. Displacement ellipsoids are drawn at the 30% probability level. |
The 1,3-benzothiazole ring system (S1/N1/C1–C7) is essentially planar with an r.m.s. deviation of 0.002 Å. The least-squares plane of this ring system forms dihedral angles of 8.18 (8), 64.96 (10), and 5.33 (9)°, respectively, with the planes of the 1,2,4-triazine ring (N4–N6/C10–C12) and the benzene rings (C13–C18 and C20–C25) of its two attached 4-methylphenyl groups. The benzene rings (C13–C18 and C20–C25) of the two 4-methylphenyl groups form angles of 68.68 (12)° with each other, while they make the angles of 57.10 (11) and 11.66 (10)°, respectively, with the 1,2,4-triazine ring plane (N4–N6/C10–C12). The bond lengths and angles in the title compound are in good agreement with those reported for related compounds (see Database survey section).
3. Supramolecular features and Hirshfeld surface analysis
In the crystal, the molecules are linked by C—H⋯O and C—H⋯N hydrogen bonds, forming sheets parallel to the (010) plane (Figs. 2
, 3
and 4
; Table 1
). The molecules are further connected by C—H⋯π and π–π interactions [Cg2⋯Cg5a = 3.7380 (12) Å, slippage = 1.201 Å; symmetry code (a) 1 − x, 1 − y, −z; where Cg2 and Cg5 are the centroids of the 1,2,4-triazine ring (N4–N6/C10–C12) and the benzene ring (C20–C25) of the 4-methylphenyl group, respectively], forming ribbons along the a-axis direction (Figs. 5
and 6
; Table 1
).
| Figure 2 A partial view of the C—H⋯O and C—H⋯N bonds (dashed lines) in the unit cell. H atoms not involved in hydrogen bonding have been omitted. |
| Figure 3 Crystal packing of the title compound viewed along the a axis showing the C—H⋯O and C—H⋯N bonds (dashed lines). H atoms not involved in hydrogen bonding have been omitted. |
| Figure 4 Crystal packing of the title compound viewed along the b axis showing the C—H⋯O and C—H⋯N bonds (dashed lines). H atoms not involved in hydrogen bonding have been omitted. |
| Figure 5 A view along the a-axis showing the C—H⋯π and π–π interactions (dashed lines). |
| Figure 6 A view along the c-axis showing the C—H⋯π and π–π interactions (dashed lines). |
A Hirshfeld surface analysis was conducted in order to confirm the existence of hydrogen bonds and intermolecular interactions (Table 2
) in the crystal structure and evaluate the contributions from the various intermolecular interactions. The three-dimensional Hirshfeld surface with a dnorm (normalized contact distance) plot and two-dimensional fingerprint plots were generated with Crystal Explorer 17.5 (Spackman et al., 2021
). The Hirshfeld surface was plotted over the range −0.1153 (red) to +1.3440 (blue) a.u. (Fig. 7
). The red spots on the surface indicate the sites of the C8—H8C⋯N5i and C17—H17⋯O1ii interactions. The two-dimensional fingerprint plots (Fig. 8
) show that the most significant contacts are H⋯H (48.6%), C⋯H/H⋯C (18.8%) and N⋯H/H⋯N (12.0%) interactions. Smaller contributions are made by S⋯H/H⋯S (5.4%), C⋯C (5.3%), N⋯C/C⋯N (4.0%), S⋯C/C⋯S (1.1%), O⋯C/C⋯O (0.8%), N⋯N (0.7%), O⋯N/N⋯O (0.2%) and S⋯S (0.1%) interactions.
| ||||||||||||||||||||||||||||||||||||||
| Figure 7 The Hirshfeld dnorm surface for the with several neighboring molecules. The C—H⋯O and C—H⋯N hydrogen bonds are depicted by red dashed lines. |
| Figure 8 The two-dimensional fingerprint plots for the title compound showing (a) all interactions, and those delineated into (b) H⋯H, (c) C⋯H/H⋯C and (d) N⋯H / H⋯N interactions. The di and de values are the closest internal and external distances (in Å) from given points on the Hirshfeld surface. |
4. Database survey
A search of the Cambridge Structural Database (CSD, Version 6.00, update of April 2025; Groom et al., 2016
) for the N′-(1,3-benzothiazol-2-yl)-1,2,4-triazine-5-carboximidamide unit revealed that the five compounds most closely related to the title compound are N-[(1,3-benzothiazol-2-yl)carbamothioyl]-4-bromobenzamide (JOMGOL: Sow et al., 2024
), N′-(1,3-benzothiazol-2-yl)benzenesulfonohydrazide (COCFOS: Baddeley et al., 2019
), N-(1,3-benzothiazol-2-yl)acetamide (TIJPAF: Nayak et al., 2013
), 2-[(6-methoxy-1,3-benzothiazol-2-yl)carbonoimidoyl]phenol (SUFFEG; Hijji et al., 2015
) and N-(4,6-dimethylpyrimidin-2-yl)-1,3-benzothiazol-2-amine (YAJBUI: Mohamed et al., 2011
).
JOMGOL crystallizes in the monoclinic space group P21/n. In the crystal, pairs of adjacent molecules interact via intermolecular hydrogen bonds of type C—H⋯N, C—H⋯S and N—H⋯S, resulting in molecular layers parallel to the ac plane.
COCFOS crystallizes in the orthorhombic Pbca, with two molecules (A and B) in the asymmetric unit. In the crystal, molecules A and B form a supramolecular dimer by pairwise N—H⋯N hydrogen bonding. The dimers are assembled into chains along the a-axis direction by N—H⋯O hydrogen bonds between A molecules, whilst the molecules are linked along [001] by linkages between centrosymmetrically related B molecules. As a result, a wavy supermolecular layer is formed. C—H⋯O points of contact are visible as layers build along the b axis.
TIJPAF crystallizes in the monoclinic P21/c, with two molecules (A and B) in the asymmetric unit. In the crystal, pairs of N—H⋯N hydrogen bonds link the A and B molecules into dimers, generating R22(8) loops. The dimers stack along [100].
SUFFEG crystallizes in the orthorhombic space group Pna21, with two molecules in the asymmetric unit. The two independent molecules are linked by a pair of C—H⋯O hydrogen bonds, forming dimers with an R22(20) ring motif. These dimers are further linked into sheets in the ab plane by weak intermolecular C—H⋯N interactions.
YAJBUI crystallizes in the monoclinic P21/n. The secondary amino N atom forms an intermolecular N—H⋯N hydrogen bond to an N atom of the fused ring of an adjacent molecule, generating a centrosymmetric cyclic hydrogen-bonded dimer with an R22(8) motif.
5. Synthesis and crystallization
The starting compound 5-cyano-1,2,4-triazine was prepared according to a literature procedure (Kozhevnikov et al., 2002
). 0.37 mmol of 3,6-di-p-tolyl-1,2,4-triazine-5-carbonitrile (1) and 0.41 mmol of 4-methoxybenzo[d]thiazol-2-amine (2) were added into a round-bottom flask and the resulting mixture was heated at 423 K for 8 h under inert atmosphere. The product was isolated by column chromatography (eluent AcOEt: CDCl3 = 1:9; Rf = 0.7 − 0.4) (Fig. 9
). Analytical samples were obtained by recrystallization from ethanol solution. A single crystal of the title compound (3) was obtained by slow evaporation of its chloroform solution.
| | Figure 9 Synthesis of title compound. |
Yield 69 mg (40%). 1H NMR (400 MHz, CDCl3): δ = 2.43 (s, 3H, CH3), 2.48 (s, 3H, CH3), 4.02 (s, 3H, OCH3), 6.85-6.91 (m, 1H, benzothiazole), 7.19–7.28 (m, 3H, C6H4CH3+benzothiazole), 7.28–7.33 (m, 1H, benzothiazole), 7.36–7.41 (m, 2H, C6H4CH3), 7.53 (br. s, 1H, NH), 7.69–7.75 (m, 2H, C6H4CH3), 8.47–8.52 (m, 2H, C6H4CH3), 10.38 (br. s, 1H, NH). Mass-spectrum, m/z (Irel, %): m/z: 467.17 [M+H]+ (100). Found, %: C 66.91, H 4.73, N 18.02. C26H22N6OS. Calculated, %: C 66.93, H 4.75, N 18.01.
6. Refinement
Crystal data, data collection and structure details are summarized in Table 3
. The H atoms of the NH2 groups were found in difference-Fourier maps and were refined with Uiso(H) = 1.2Ueq(N). The C-bound H atoms were positioned geometrically (C—H = 0.93–0.96 Å) and refined using a riding model, with Uiso(H) = 1.2 or 1.5Ueq(C).
|
Supporting information
CCDC reference: 2389378
contains datablock I. DOI: https://doi.org/10.1107/S2056989026007760/jp2030sup1.cif
Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2056989026007760/jp2030Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2056989026007760/jp2030Isup3.cml
| C26H22N6OS | Z = 2 |
| Mr = 466.55 | F(000) = 488 |
| Triclinic, P1 | Dx = 1.338 Mg m−3 |
| a = 9.0055 (1) Å | Mo Kα radiation, λ = 0.71073 Å |
| b = 11.5397 (1) Å | Cell parameters from 3380 reflections |
| c = 11.7583 (1) Å | θ = 1.8–25.2° |
| α = 103.401 (1)° | µ = 0.17 mm−1 |
| β = 100.311 (1)° | T = 293 K |
| γ = 95.215 (1)° | Block, yellow |
| V = 1158.22 (2) Å3 | 0.41 × 0.28 × 0.13 mm |
| XtaLAB Synergy, Dualflex, HyPix diffractometer | 6298 independent reflections |
| Radiation source: micro-focus sealed X-ray tube, PhotonJet (Mo) X-ray Source | 3926 reflections with I > 2σ(I) |
| Mirror monochromator | Rint = 0.071 |
| ω scans | θmax = 29.6°, θmin = 1.8° |
| Absorption correction: multi-scan (CrysAlisPro; Rigaku OD, 2021) | h = −12→12 |
| Tmin = 0.745, Tmax = 0.978 | k = −16→15 |
| 176835 measured reflections | l = −15→16 |
| Refinement on F2 | Primary atom site location: difference Fourier map |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.050 | Hydrogen site location: mixed |
| wR(F2) = 0.180 | H atoms treated by a mixture of independent and constrained refinement |
| S = 1.13 | w = 1/[σ2(Fo2) + (0.0631P)2 + 0.5317P] where P = (Fo2 + 2Fc2)/3 |
| 6298 reflections | (Δ/σ)max < 0.001 |
| 316 parameters | Δρmax = 0.23 e Å−3 |
| 0 restraints | Δρmin = −0.33 e Å−3 |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| x | y | z | Uiso*/Ueq | ||
| C1 | 0.5038 (2) | 0.27699 (18) | 0.47268 (18) | 0.0465 (4) | |
| C2 | 0.6980 (2) | 0.26819 (18) | 0.61272 (17) | 0.0466 (4) | |
| C3 | 0.5968 (3) | 0.1778 (2) | 0.6285 (2) | 0.0550 (5) | |
| C4 | 0.6385 (3) | 0.1141 (2) | 0.7144 (2) | 0.0705 (7) | |
| H4 | 0.570738 | 0.053160 | 0.724153 | 0.085* | |
| C5 | 0.7819 (3) | 0.1445 (3) | 0.7834 (2) | 0.0748 (8) | |
| H5 | 0.811968 | 0.102707 | 0.840428 | 0.090* | |
| C6 | 0.8843 (3) | 0.2356 (3) | 0.7711 (2) | 0.0668 (7) | |
| H6 | 0.980545 | 0.254748 | 0.820683 | 0.080* | |
| C7 | 0.8450 (2) | 0.2984 (2) | 0.68614 (19) | 0.0530 (5) | |
| C8 | 1.0894 (3) | 0.4134 (3) | 0.7260 (3) | 0.0911 (10) | |
| H8A | 1.140292 | 0.479608 | 0.704830 | 0.137* | |
| H8B | 1.137588 | 0.343166 | 0.703040 | 0.137* | |
| H8C | 1.095260 | 0.432897 | 0.810727 | 0.137* | |
| C9 | 0.4539 (2) | 0.39486 (18) | 0.33990 (16) | 0.0423 (4) | |
| C10 | 0.3467 (2) | 0.42415 (17) | 0.24019 (16) | 0.0412 (4) | |
| C11 | 0.3239 (2) | 0.53073 (18) | 0.09882 (17) | 0.0431 (4) | |
| C12 | 0.1965 (2) | 0.36600 (19) | 0.18987 (18) | 0.0453 (4) | |
| C13 | 0.1038 (2) | 0.28046 (19) | 0.23459 (18) | 0.0468 (5) | |
| C14 | 0.0420 (3) | 0.1680 (2) | 0.1617 (2) | 0.0571 (5) | |
| H14 | 0.059479 | 0.146122 | 0.084447 | 0.068* | |
| C15 | −0.0451 (3) | 0.0881 (2) | 0.2018 (3) | 0.0662 (6) | |
| H15 | −0.082782 | 0.012051 | 0.151942 | 0.079* | |
| C16 | −0.0780 (3) | 0.1179 (3) | 0.3144 (3) | 0.0667 (7) | |
| C17 | −0.0205 (3) | 0.2330 (3) | 0.3851 (2) | 0.0717 (7) | |
| H17 | −0.044045 | 0.256997 | 0.460132 | 0.086* | |
| C18 | 0.0705 (3) | 0.3125 (2) | 0.3471 (2) | 0.0610 (6) | |
| H18 | 0.109637 | 0.388064 | 0.397334 | 0.073* | |
| C19 | −0.1738 (4) | 0.0310 (3) | 0.3591 (3) | 0.1027 (11) | |
| H19A | −0.231054 | −0.031130 | 0.292471 | 0.154* | |
| H19B | −0.242585 | 0.073161 | 0.401488 | 0.154* | |
| H19C | −0.108756 | −0.004213 | 0.411681 | 0.154* | |
| C20 | 0.3869 (2) | 0.62587 (18) | 0.04898 (18) | 0.0456 (4) | |
| C21 | 0.5380 (2) | 0.67711 (19) | 0.0873 (2) | 0.0516 (5) | |
| H21 | 0.600772 | 0.652539 | 0.146502 | 0.062* | |
| C22 | 0.5965 (3) | 0.7648 (2) | 0.0380 (2) | 0.0571 (5) | |
| H22 | 0.697977 | 0.798796 | 0.065626 | 0.069* | |
| C23 | 0.5077 (3) | 0.80274 (19) | −0.0510 (2) | 0.0545 (5) | |
| C24 | 0.3563 (3) | 0.7517 (2) | −0.0881 (2) | 0.0600 (6) | |
| H24 | 0.294026 | 0.776157 | −0.147659 | 0.072* | |
| C25 | 0.2957 (3) | 0.6656 (2) | −0.0388 (2) | 0.0544 (5) | |
| H25 | 0.193187 | 0.633915 | −0.064515 | 0.065* | |
| C26 | 0.5720 (4) | 0.8962 (2) | −0.1063 (3) | 0.0733 (7) | |
| H26A | 0.652934 | 0.949887 | −0.048577 | 0.110* | |
| H26B | 0.493120 | 0.941006 | −0.131536 | 0.110* | |
| H26C | 0.610847 | 0.857396 | −0.174114 | 0.110* | |
| N1 | 0.64364 (19) | 0.32416 (15) | 0.52443 (14) | 0.0455 (4) | |
| N2 | 0.40818 (19) | 0.30594 (16) | 0.38132 (15) | 0.0494 (4) | |
| N3 | 0.5885 (2) | 0.46419 (19) | 0.37481 (17) | 0.0542 (5) | |
| H3A | 0.598 (3) | 0.527 (2) | 0.344 (2) | 0.065* | |
| H3B | 0.664 (3) | 0.445 (2) | 0.431 (2) | 0.065* | |
| N4 | 0.40762 (18) | 0.50838 (15) | 0.19569 (14) | 0.0440 (4) | |
| N5 | 0.1895 (2) | 0.46715 (18) | 0.04002 (16) | 0.0560 (5) | |
| N6 | 0.12501 (19) | 0.38601 (18) | 0.08723 (16) | 0.0544 (5) | |
| O1 | 0.93428 (18) | 0.39028 (16) | 0.66585 (15) | 0.0650 (4) | |
| S1 | 0.42638 (7) | 0.16195 (6) | 0.52779 (6) | 0.0669 (2) |
| U11 | U22 | U33 | U12 | U13 | U23 | |
| C1 | 0.0459 (10) | 0.0492 (11) | 0.0447 (10) | 0.0013 (8) | 0.0035 (8) | 0.0194 (9) |
| C2 | 0.0510 (11) | 0.0504 (11) | 0.0405 (10) | 0.0120 (9) | 0.0056 (8) | 0.0165 (8) |
| C3 | 0.0611 (13) | 0.0542 (12) | 0.0529 (12) | 0.0088 (10) | 0.0064 (10) | 0.0236 (10) |
| C4 | 0.0857 (18) | 0.0673 (15) | 0.0701 (16) | 0.0128 (13) | 0.0137 (14) | 0.0415 (13) |
| C5 | 0.0890 (19) | 0.0844 (19) | 0.0641 (15) | 0.0310 (16) | 0.0092 (14) | 0.0424 (14) |
| C6 | 0.0663 (15) | 0.0840 (18) | 0.0549 (13) | 0.0268 (13) | 0.0011 (11) | 0.0295 (12) |
| C7 | 0.0496 (11) | 0.0643 (13) | 0.0455 (11) | 0.0128 (10) | 0.0051 (9) | 0.0168 (10) |
| C8 | 0.0507 (14) | 0.134 (3) | 0.0775 (19) | −0.0033 (16) | −0.0105 (13) | 0.0300 (19) |
| C9 | 0.0414 (10) | 0.0470 (10) | 0.0365 (9) | 0.0014 (8) | 0.0021 (7) | 0.0128 (8) |
| C10 | 0.0391 (9) | 0.0468 (10) | 0.0378 (9) | 0.0047 (8) | 0.0047 (7) | 0.0139 (8) |
| C11 | 0.0391 (9) | 0.0503 (11) | 0.0415 (10) | 0.0079 (8) | 0.0040 (7) | 0.0176 (8) |
| C12 | 0.0391 (9) | 0.0542 (11) | 0.0433 (10) | 0.0041 (8) | 0.0044 (8) | 0.0175 (9) |
| C13 | 0.0351 (9) | 0.0580 (12) | 0.0480 (11) | 0.0033 (8) | 0.0030 (8) | 0.0203 (9) |
| C14 | 0.0505 (12) | 0.0634 (14) | 0.0570 (13) | 0.0031 (10) | 0.0116 (10) | 0.0163 (11) |
| C15 | 0.0571 (14) | 0.0591 (14) | 0.0802 (17) | −0.0023 (11) | 0.0105 (12) | 0.0201 (12) |
| C16 | 0.0510 (13) | 0.0774 (17) | 0.0797 (17) | 0.0009 (11) | 0.0124 (12) | 0.0397 (14) |
| C17 | 0.0647 (15) | 0.095 (2) | 0.0580 (14) | −0.0052 (14) | 0.0196 (12) | 0.0257 (14) |
| C18 | 0.0558 (13) | 0.0708 (15) | 0.0534 (13) | −0.0038 (11) | 0.0129 (10) | 0.0133 (11) |
| C19 | 0.093 (2) | 0.108 (3) | 0.114 (3) | −0.019 (2) | 0.025 (2) | 0.053 (2) |
| C20 | 0.0468 (10) | 0.0481 (11) | 0.0440 (10) | 0.0097 (8) | 0.0061 (8) | 0.0167 (8) |
| C21 | 0.0478 (11) | 0.0544 (12) | 0.0556 (12) | 0.0059 (9) | 0.0056 (9) | 0.0241 (10) |
| C22 | 0.0528 (12) | 0.0550 (12) | 0.0649 (14) | 0.0020 (10) | 0.0104 (10) | 0.0212 (11) |
| C23 | 0.0694 (14) | 0.0447 (11) | 0.0591 (13) | 0.0169 (10) | 0.0240 (11) | 0.0210 (10) |
| C24 | 0.0693 (15) | 0.0609 (13) | 0.0585 (13) | 0.0197 (11) | 0.0097 (11) | 0.0312 (11) |
| C25 | 0.0497 (11) | 0.0603 (13) | 0.0559 (12) | 0.0097 (10) | 0.0020 (9) | 0.0263 (10) |
| C26 | 0.097 (2) | 0.0598 (14) | 0.0801 (17) | 0.0171 (13) | 0.0397 (16) | 0.0333 (13) |
| N1 | 0.0438 (9) | 0.0511 (9) | 0.0421 (9) | 0.0035 (7) | 0.0017 (7) | 0.0195 (7) |
| N2 | 0.0452 (9) | 0.0546 (10) | 0.0455 (9) | −0.0020 (7) | −0.0034 (7) | 0.0205 (8) |
| N3 | 0.0424 (9) | 0.0663 (12) | 0.0549 (11) | −0.0050 (8) | −0.0041 (8) | 0.0331 (9) |
| N4 | 0.0444 (9) | 0.0481 (9) | 0.0401 (8) | 0.0061 (7) | 0.0034 (7) | 0.0163 (7) |
| N5 | 0.0466 (10) | 0.0694 (12) | 0.0536 (10) | −0.0001 (8) | −0.0016 (8) | 0.0311 (9) |
| N6 | 0.0412 (9) | 0.0695 (12) | 0.0534 (10) | −0.0004 (8) | −0.0007 (7) | 0.0283 (9) |
| O1 | 0.0477 (9) | 0.0818 (12) | 0.0610 (10) | −0.0005 (8) | −0.0061 (7) | 0.0260 (9) |
| S1 | 0.0618 (4) | 0.0670 (4) | 0.0726 (4) | −0.0104 (3) | −0.0026 (3) | 0.0391 (3) |
| C1—N1 | 1.304 (2) | C13—C18 | 1.383 (3) |
| C1—N2 | 1.377 (3) | C14—C15 | 1.376 (3) |
| C1—S1 | 1.750 (2) | C14—H14 | 0.9300 |
| C2—N1 | 1.386 (2) | C15—C16 | 1.381 (4) |
| C2—C3 | 1.389 (3) | C15—H15 | 0.9300 |
| C2—C7 | 1.410 (3) | C16—C17 | 1.390 (4) |
| C3—C4 | 1.400 (3) | C16—C19 | 1.508 (4) |
| C3—S1 | 1.729 (2) | C17—C18 | 1.377 (3) |
| C4—C5 | 1.363 (4) | C17—H17 | 0.9300 |
| C4—H4 | 0.9300 | C18—H18 | 0.9300 |
| C5—C6 | 1.385 (4) | C19—H19A | 0.9600 |
| C5—H5 | 0.9300 | C19—H19B | 0.9600 |
| C6—C7 | 1.379 (3) | C19—H19C | 0.9600 |
| C6—H6 | 0.9300 | C20—C21 | 1.383 (3) |
| C7—O1 | 1.363 (3) | C20—C25 | 1.392 (3) |
| C8—O1 | 1.419 (3) | C21—C22 | 1.385 (3) |
| C8—H8A | 0.9600 | C21—H21 | 0.9300 |
| C8—H8B | 0.9600 | C22—C23 | 1.379 (3) |
| C8—H8C | 0.9600 | C22—H22 | 0.9300 |
| C9—N2 | 1.299 (3) | C23—C24 | 1.385 (3) |
| C9—N3 | 1.331 (2) | C23—C26 | 1.506 (3) |
| C9—C10 | 1.503 (3) | C24—C25 | 1.379 (3) |
| C10—N4 | 1.327 (2) | C24—H24 | 0.9300 |
| C10—C12 | 1.412 (3) | C25—H25 | 0.9300 |
| C11—N5 | 1.336 (3) | C26—H26A | 0.9600 |
| C11—N4 | 1.340 (2) | C26—H26B | 0.9600 |
| C11—C20 | 1.475 (3) | C26—H26C | 0.9600 |
| C12—N6 | 1.343 (3) | N3—H3A | 0.89 (3) |
| C12—C13 | 1.482 (3) | N3—H3B | 0.93 (3) |
| C13—C14 | 1.383 (3) | N5—N6 | 1.334 (2) |
| N1—C1—N2 | 128.93 (18) | C15—C16—C19 | 122.0 (3) |
| N1—C1—S1 | 115.58 (15) | C17—C16—C19 | 121.0 (3) |
| N2—C1—S1 | 115.49 (15) | C18—C17—C16 | 121.8 (2) |
| N1—C2—C3 | 116.05 (18) | C18—C17—H17 | 119.1 |
| N1—C2—C7 | 124.46 (19) | C16—C17—H17 | 119.1 |
| C3—C2—C7 | 119.48 (19) | C17—C18—C13 | 120.3 (2) |
| C2—C3—C4 | 121.5 (2) | C17—C18—H18 | 119.8 |
| C2—C3—S1 | 109.14 (15) | C13—C18—H18 | 119.8 |
| C4—C3—S1 | 129.4 (2) | C16—C19—H19A | 109.5 |
| C5—C4—C3 | 117.7 (2) | C16—C19—H19B | 109.5 |
| C5—C4—H4 | 121.1 | H19A—C19—H19B | 109.5 |
| C3—C4—H4 | 121.1 | C16—C19—H19C | 109.5 |
| C4—C5—C6 | 122.1 (2) | H19A—C19—H19C | 109.5 |
| C4—C5—H5 | 119.0 | H19B—C19—H19C | 109.5 |
| C6—C5—H5 | 119.0 | C21—C20—C25 | 118.3 (2) |
| C7—C6—C5 | 120.7 (2) | C21—C20—C11 | 121.12 (17) |
| C7—C6—H6 | 119.6 | C25—C20—C11 | 120.58 (19) |
| C5—C6—H6 | 119.6 | C20—C21—C22 | 120.5 (2) |
| O1—C7—C6 | 126.5 (2) | C20—C21—H21 | 119.8 |
| O1—C7—C2 | 115.05 (18) | C22—C21—H21 | 119.8 |
| C6—C7—C2 | 118.5 (2) | C23—C22—C21 | 121.6 (2) |
| O1—C8—H8A | 109.5 | C23—C22—H22 | 119.2 |
| O1—C8—H8B | 109.5 | C21—C22—H22 | 119.2 |
| H8A—C8—H8B | 109.5 | C22—C23—C24 | 117.5 (2) |
| O1—C8—H8C | 109.5 | C22—C23—C26 | 121.6 (2) |
| H8A—C8—H8C | 109.5 | C24—C23—C26 | 120.8 (2) |
| H8B—C8—H8C | 109.5 | C25—C24—C23 | 121.6 (2) |
| N2—C9—N3 | 127.22 (18) | C25—C24—H24 | 119.2 |
| N2—C9—C10 | 118.00 (17) | C23—C24—H24 | 119.2 |
| N3—C9—C10 | 114.77 (17) | C24—C25—C20 | 120.4 (2) |
| N4—C10—C12 | 120.41 (17) | C24—C25—H25 | 119.8 |
| N4—C10—C9 | 113.95 (16) | C20—C25—H25 | 119.8 |
| C12—C10—C9 | 125.54 (17) | C23—C26—H26A | 109.5 |
| N5—C11—N4 | 123.82 (18) | C23—C26—H26B | 109.5 |
| N5—C11—C20 | 117.49 (17) | H26A—C26—H26B | 109.5 |
| N4—C11—C20 | 118.57 (17) | C23—C26—H26C | 109.5 |
| N6—C12—C10 | 118.44 (18) | H26A—C26—H26C | 109.5 |
| N6—C12—C13 | 113.36 (17) | H26B—C26—H26C | 109.5 |
| C10—C12—C13 | 128.18 (17) | C1—N1—C2 | 110.04 (17) |
| C14—C13—C18 | 118.3 (2) | C9—N2—C1 | 119.35 (17) |
| C14—C13—C12 | 120.26 (19) | C9—N3—H3A | 115.9 (17) |
| C18—C13—C12 | 121.4 (2) | C9—N3—H3B | 118.7 (16) |
| C15—C14—C13 | 120.8 (2) | H3A—N3—H3B | 125 (2) |
| C15—C14—H14 | 119.6 | C10—N4—C11 | 117.28 (17) |
| C13—C14—H14 | 119.6 | N6—N5—C11 | 118.75 (17) |
| C14—C15—C16 | 121.6 (2) | N5—N6—C12 | 120.45 (17) |
| C14—C15—H15 | 119.2 | C7—O1—C8 | 117.1 (2) |
| C16—C15—H15 | 119.2 | C3—S1—C1 | 89.20 (10) |
| C15—C16—C17 | 117.0 (2) | ||
| N1—C2—C3—C4 | 179.6 (2) | N4—C11—C20—C21 | 11.0 (3) |
| C7—C2—C3—C4 | −1.3 (4) | N5—C11—C20—C25 | 14.2 (3) |
| N1—C2—C3—S1 | 0.3 (2) | N4—C11—C20—C25 | −169.59 (19) |
| C7—C2—C3—S1 | 179.36 (17) | C25—C20—C21—C22 | −0.7 (3) |
| C2—C3—C4—C5 | 0.6 (4) | C11—C20—C21—C22 | 178.7 (2) |
| S1—C3—C4—C5 | 179.9 (2) | C20—C21—C22—C23 | −0.8 (4) |
| C3—C4—C5—C6 | 0.6 (4) | C21—C22—C23—C24 | 1.3 (4) |
| C4—C5—C6—C7 | −1.1 (4) | C21—C22—C23—C26 | −178.8 (2) |
| C5—C6—C7—O1 | 179.3 (2) | C22—C23—C24—C25 | −0.3 (4) |
| C5—C6—C7—C2 | 0.5 (4) | C26—C23—C24—C25 | 179.7 (2) |
| N1—C2—C7—O1 | 0.7 (3) | C23—C24—C25—C20 | −1.1 (4) |
| C3—C2—C7—O1 | −178.3 (2) | C21—C20—C25—C24 | 1.6 (3) |
| N1—C2—C7—C6 | 179.7 (2) | C11—C20—C25—C24 | −177.8 (2) |
| C3—C2—C7—C6 | 0.7 (3) | N2—C1—N1—C2 | 179.9 (2) |
| N2—C9—C10—N4 | −173.89 (18) | S1—C1—N1—C2 | 0.6 (2) |
| N3—C9—C10—N4 | 5.3 (3) | C3—C2—N1—C1 | −0.5 (3) |
| N2—C9—C10—C12 | 2.6 (3) | C7—C2—N1—C1 | −179.6 (2) |
| N3—C9—C10—C12 | −178.2 (2) | N3—C9—N2—C1 | 1.0 (3) |
| N4—C10—C12—N6 | 8.8 (3) | C10—C9—N2—C1 | −179.96 (18) |
| C9—C10—C12—N6 | −167.53 (19) | N1—C1—N2—C9 | −3.2 (4) |
| N4—C10—C12—C13 | −172.7 (2) | S1—C1—N2—C9 | 176.18 (16) |
| C9—C10—C12—C13 | 11.0 (3) | C12—C10—N4—C11 | −3.2 (3) |
| N6—C12—C13—C14 | 54.0 (3) | C9—C10—N4—C11 | 173.53 (17) |
| C10—C12—C13—C14 | −124.6 (2) | N5—C11—N4—C10 | −5.5 (3) |
| N6—C12—C13—C18 | −122.7 (2) | C20—C11—N4—C10 | 178.55 (17) |
| C10—C12—C13—C18 | 58.7 (3) | N4—C11—N5—N6 | 8.4 (3) |
| C18—C13—C14—C15 | −2.7 (3) | C20—C11—N5—N6 | −175.61 (19) |
| C12—C13—C14—C15 | −179.6 (2) | C11—N5—N6—C12 | −2.2 (3) |
| C13—C14—C15—C16 | 2.0 (4) | C10—C12—N6—N5 | −5.9 (3) |
| C14—C15—C16—C17 | 0.7 (4) | C13—C12—N6—N5 | 175.36 (19) |
| C14—C15—C16—C19 | 179.8 (3) | C6—C7—O1—C8 | 9.3 (4) |
| C15—C16—C17—C18 | −2.6 (4) | C2—C7—O1—C8 | −171.8 (2) |
| C19—C16—C17—C18 | 178.3 (3) | C2—C3—S1—C1 | 0.05 (17) |
| C16—C17—C18—C13 | 1.8 (4) | C4—C3—S1—C1 | −179.3 (3) |
| C14—C13—C18—C17 | 0.9 (4) | N1—C1—S1—C3 | −0.38 (18) |
| C12—C13—C18—C17 | 177.7 (2) | N2—C1—S1—C3 | −179.81 (18) |
| N5—C11—C20—C21 | −165.3 (2) |
| Cg4 is the centroid of the C13–C18 ring. |
| D—H···A | D—H | H···A | D···A | D—H···A |
| N3—H3A···N4 | 0.89 (2) | 2.17 (2) | 2.602 (3) | 109 (2) |
| N3—H3B···N1 | 0.94 (2) | 1.98 (2) | 2.665 (3) | 128 (2) |
| C8—H8C···N5i | 0.96 | 2.60 | 3.532 (4) | 163 |
| C17—H17···O1ii | 0.93 | 2.60 | 3.492 (3) | 161 |
| C21—H21···N4 | 0.93 | 2.53 | 2.840 (3) | 100 |
| C24—H24···Cg4iii | 0.93 | 2.96 | 3.796 (3) | 151 |
| Symmetry codes: (i) x+1, y, z+1; (ii) x−1, y, z; (iii) −x, −y+1, −z. |
| Contact | Distance | Symmetry operation |
| C4···S1 | 3.67 | 1 - x, -y, 1 - z |
| H19C···.H19C | 2.56 | -x, -y, 1 - z |
| O1···H17 | 2.60 | 1 + x, y, z |
| H18···O1 | 2.87 | 1 - x, 1 - y, 1 - z |
| H26C···N2 | 2.68 | 1 - x, 1 - y, -z |
| H8A···H3A | 2.53 | 2 - x, 1 - y, 1 - z |
| H25···H8C | 2.43 | -1 + x, y, -1 + z |
| H25···N6 | 2.81 | -x, 1 - y, -z |
| H26B···H4 | 2.51 | x, 1 + y, -1 + z |
| C26···C26 | 2.55 | 1 - x, 2 - y, -z |
Acknowledgements
The authors' contributions are as follows. Conceptualization, MA and GMM; synthesis, YKS, DSK and VSG; X-ray analysis, YKS, DSK and VSG; writing (review and editing of the manuscript) NAE, MA, GMM and KIH; funding acquisition, YKS, DSK, VSG, NAE and KIH; supervision, MA and GMM.
Funding information
Funding for this research was provided by: the Ministry of Science and Higher Education of the Russian Federation, the Azerbaijan State Pedagogical University and Azerbaijan Medical University (contract No. 124020200072-0).
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