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The novel title tetraselenacalix[4]arene, C16H8S4Se4 or [(C4H2S)Se]4, has a centrosymmetric cyclic molecular structure with approximate C2h molecular symmetry. The four thienyl rings are joined together by Se bridges and exhibit a syn-syn-anti-anti arrangement around the molecule. The lattice consists of skewed stacks of molecules, with chalcogen-chalcogen close contacts binding the stacks together, forming a two-dimensional network of molecules.
Supporting information
CCDC reference: 197338
Thiophene (4 ml, 50.63 mmol) was added to a mixture of dithienyl diselenide
(0.3252 g, 1.00 mmol) and PhI(OAc)2 (0.6451 g, 2.00 mmol) in acetonitrile (6 ml). The reaction mixture was stirred overnight, during which time a yellow
sparingly soluble precipitate was obtained. Analysis found: C 31.74, H 1.51, S
19.49%; calculated for C16H8S4Se4: C 29.82, H 1.25, S 19.91%. The
precipitate was partially dissolved in tetrahydrofuran. Yellow crystals of (I)
were obtained upon slow evaporation of the solvent.
H atoms were treated as riding, with C—H = 0.93 Å and Uiso(H) =
1.2Ueq(C). Are these the correct constraints?
Data collection: KappaCCD Server Software (Bruker-Nonius, 2002); cell refinement: DENZO-SMN (Otwinowski & Minor, 1997); data reduction: DENZO-SMN; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: DIAMOND (Brandenburg & Berndt, 1999); software used to prepare material for publication: WinGX (Farrugia, 1999).
1,3,5,7-Tetraselena-2,4,6,8(2,5)-tetrathiophenaoctaphane
top
Crystal data top
C16H8S4Se4 | Z = 1 |
Mr = 644.34 | F(000) = 304 |
Triclinic, P1 | Dx = 2.192 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 6.3186 (13) Å | Cell parameters from 1636 reflections |
b = 8.0176 (16) Å | θ = 3.1–26.0° |
c = 9.7493 (19) Å | µ = 7.94 mm−1 |
α = 97.96 (3)° | T = 293 K |
β = 92.49 (3)° | Block, yellow |
γ = 92.68 (3)° | 0.20 × 0.15 × 0.15 mm |
V = 487.99 (17) Å3 | |
Data collection top
Nonius KappaCCD area-detector diffractometer | 1908 independent reflections |
Radiation source: fine-focus sealed tube | 1636 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.046 |
ϕ scans, and ω scans with κ offsets | θmax = 26.0°, θmin = 3.1° |
Absorption correction: ψ (XPREP in SHELXTL; Bruker 2001) | h = −7→7 |
Tmin = 0.238, Tmax = 0.304 | k = −9→9 |
6496 measured reflections | l = −12→11 |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.033 | H-atom parameters constrained |
wR(F2) = 0.091 | w = 1/[σ2(Fo2) + (0.0291P)2 + 0.7694P] where P = (Fo2 + 2Fc2)/3 |
S = 1.16 | (Δ/σ)max = 0.001 |
1908 reflections | Δρmax = 0.66 e Å−3 |
110 parameters | Δρmin = −0.48 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 1997), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0063 (17) |
Crystal data top
C16H8S4Se4 | γ = 92.68 (3)° |
Mr = 644.34 | V = 487.99 (17) Å3 |
Triclinic, P1 | Z = 1 |
a = 6.3186 (13) Å | Mo Kα radiation |
b = 8.0176 (16) Å | µ = 7.94 mm−1 |
c = 9.7493 (19) Å | T = 293 K |
α = 97.96 (3)° | 0.20 × 0.15 × 0.15 mm |
β = 92.49 (3)° | |
Data collection top
Nonius KappaCCD area-detector diffractometer | 1908 independent reflections |
Absorption correction: ψ (XPREP in SHELXTL; Bruker 2001) | 1636 reflections with I > 2σ(I) |
Tmin = 0.238, Tmax = 0.304 | Rint = 0.046 |
6496 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.033 | 0 restraints |
wR(F2) = 0.091 | H-atom parameters constrained |
S = 1.16 | Δρmax = 0.66 e Å−3 |
1908 reflections | Δρmin = −0.48 e Å−3 |
110 parameters | |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Se1 | 0.76538 (9) | 0.67066 (6) | 0.64754 (5) | 0.0509 (2) | |
Se2 | 0.22756 (8) | 0.03773 (6) | 0.73549 (5) | 0.04943 (19) | |
S1 | 0.4135 (2) | 0.40825 (15) | 0.71767 (14) | 0.0509 (3) | |
S2 | 0.33863 (19) | 0.16367 (16) | 1.05346 (12) | 0.0483 (3) | |
C1 | 0.6556 (7) | 0.4459 (5) | 0.6514 (4) | 0.0410 (10) | |
C2 | 0.7465 (7) | 0.3015 (6) | 0.6052 (5) | 0.0445 (10) | |
H2 | 0.8752 | 0.2971 | 0.5623 | 0.053* | |
C3 | 0.6237 (8) | 0.1569 (6) | 0.6295 (5) | 0.0447 (10) | |
H3 | 0.6650 | 0.0473 | 0.6055 | 0.054* | |
C4 | 0.4405 (7) | 0.1940 (5) | 0.6909 (4) | 0.0402 (9) | |
C5 | 0.1658 (7) | 0.1535 (5) | 0.9115 (4) | 0.0409 (10) | |
C6 | −0.0188 (8) | 0.2263 (6) | 0.9460 (5) | 0.0523 (12) | |
H6 | −0.1317 | 0.2325 | 0.8829 | 0.063* | |
C7 | −0.0197 (8) | 0.2913 (6) | 1.0885 (5) | 0.0525 (12) | |
H7 | −0.1338 | 0.3444 | 1.1291 | 0.063* | |
C8 | 0.1620 (7) | 0.2681 (5) | 1.1592 (4) | 0.0410 (10) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Se1 | 0.0779 (4) | 0.0403 (3) | 0.0334 (3) | −0.0081 (2) | 0.0073 (2) | 0.00381 (19) |
Se2 | 0.0609 (3) | 0.0463 (3) | 0.0368 (3) | −0.0130 (2) | 0.0055 (2) | −0.0049 (2) |
S1 | 0.0559 (7) | 0.0392 (6) | 0.0563 (7) | 0.0024 (5) | 0.0172 (6) | −0.0028 (5) |
S2 | 0.0487 (7) | 0.0544 (7) | 0.0387 (6) | 0.0060 (5) | 0.0010 (5) | −0.0047 (5) |
C1 | 0.050 (2) | 0.041 (2) | 0.031 (2) | −0.0024 (19) | 0.0056 (18) | 0.0001 (17) |
C2 | 0.048 (2) | 0.048 (2) | 0.037 (2) | 0.002 (2) | 0.0086 (19) | 0.0032 (19) |
C3 | 0.054 (3) | 0.035 (2) | 0.043 (2) | 0.0043 (19) | 0.000 (2) | −0.0023 (18) |
C4 | 0.050 (2) | 0.038 (2) | 0.032 (2) | −0.0022 (18) | 0.0001 (18) | 0.0022 (17) |
C5 | 0.050 (2) | 0.039 (2) | 0.032 (2) | −0.0053 (19) | 0.0022 (18) | 0.0006 (17) |
C6 | 0.055 (3) | 0.057 (3) | 0.044 (3) | 0.004 (2) | −0.003 (2) | 0.005 (2) |
C7 | 0.054 (3) | 0.054 (3) | 0.050 (3) | 0.008 (2) | 0.010 (2) | 0.002 (2) |
C8 | 0.051 (3) | 0.035 (2) | 0.035 (2) | −0.0004 (18) | 0.0059 (18) | −0.0006 (17) |
Geometric parameters (Å, º) top
Se1—C1 | 1.906 (4) | C2—H2 | 0.9300 |
Se1—C8i | 1.910 (4) | C3—C4 | 1.352 (7) |
Se2—C5 | 1.900 (4) | C3—H3 | 0.9300 |
Se2—C4 | 1.901 (4) | C5—C6 | 1.363 (7) |
S1—C1 | 1.717 (5) | C6—C7 | 1.415 (7) |
S1—C4 | 1.719 (4) | C6—H6 | 0.9300 |
S2—C5 | 1.716 (4) | C7—C8 | 1.347 (7) |
S2—C8 | 1.720 (4) | C7—H7 | 0.9300 |
C1—C2 | 1.347 (6) | C8—Se1i | 1.910 (4) |
C2—C3 | 1.417 (7) | | |
| | | |
C1—Se1—C8i | 98.75 (18) | C3—C4—Se2 | 126.8 (3) |
C5—Se2—C4 | 97.86 (18) | S1—C4—Se2 | 122.4 (3) |
C1—S1—C4 | 91.7 (2) | C6—C5—S2 | 111.2 (3) |
C5—S2—C8 | 91.6 (2) | C6—C5—Se2 | 126.7 (3) |
C2—C1—S1 | 111.7 (3) | S2—C5—Se2 | 121.9 (3) |
C2—C1—Se1 | 127.5 (4) | C5—C6—C7 | 112.6 (4) |
S1—C1—Se1 | 120.8 (2) | C5—C6—H6 | 123.7 |
C1—C2—C3 | 112.3 (4) | C7—C6—H6 | 123.7 |
C1—C2—H2 | 123.9 | C8—C7—C6 | 112.9 (4) |
C3—C2—H2 | 123.9 | C8—C7—H7 | 123.5 |
C4—C3—C2 | 113.4 (4) | C6—C7—H7 | 123.5 |
C4—C3—H3 | 123.3 | C7—C8—S2 | 111.6 (3) |
C2—C3—H3 | 123.3 | C7—C8—Se1i | 128.6 (3) |
C3—C4—S1 | 110.8 (3) | S2—C8—Se1i | 119.8 (3) |
| | | |
C4—S1—C1—C2 | 2.9 (4) | C5—Se2—C4—S1 | −44.1 (3) |
C4—S1—C1—Se1 | −177.6 (3) | C8—S2—C5—C6 | −0.5 (4) |
C8i—Se1—C1—C2 | −107.5 (4) | C8—S2—C5—Se2 | −176.0 (3) |
C8i—Se1—C1—S1 | 73.1 (3) | C4—Se2—C5—C6 | 113.1 (5) |
S1—C1—C2—C3 | −2.8 (5) | C4—Se2—C5—S2 | −72.1 (3) |
Se1—C1—C2—C3 | 177.7 (3) | S2—C5—C6—C7 | 0.2 (6) |
C1—C2—C3—C4 | 1.2 (6) | Se2—C5—C6—C7 | 175.5 (4) |
C2—C3—C4—S1 | 1.0 (5) | C5—C6—C7—C8 | 0.3 (7) |
C2—C3—C4—Se2 | 177.8 (3) | C6—C7—C8—S2 | −0.7 (6) |
C1—S1—C4—C3 | −2.2 (4) | C6—C7—C8—Se1i | −178.8 (4) |
C1—S1—C4—Se2 | −179.1 (3) | C5—S2—C8—C7 | 0.7 (4) |
C5—Se2—C4—C3 | 139.4 (4) | C5—S2—C8—Se1i | 179.0 (3) |
Symmetry code: (i) −x+1, −y+1, −z+2. |
Experimental details
Crystal data |
Chemical formula | C16H8S4Se4 |
Mr | 644.34 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 6.3186 (13), 8.0176 (16), 9.7493 (19) |
α, β, γ (°) | 97.96 (3), 92.49 (3), 92.68 (3) |
V (Å3) | 487.99 (17) |
Z | 1 |
Radiation type | Mo Kα |
µ (mm−1) | 7.94 |
Crystal size (mm) | 0.20 × 0.15 × 0.15 |
|
Data collection |
Diffractometer | Nonius KappaCCD area-detector diffractometer |
Absorption correction | ψ (XPREP in SHELXTL; Bruker 2001) |
Tmin, Tmax | 0.238, 0.304 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6496, 1908, 1636 |
Rint | 0.046 |
(sin θ/λ)max (Å−1) | 0.617 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.033, 0.091, 1.16 |
No. of reflections | 1908 |
No. of parameters | 110 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.66, −0.48 |
Selected geometric parameters (Å, º) topSe1—C1 | 1.906 (4) | Se2—C5 | 1.900 (4) |
Se1—C8i | 1.910 (4) | Se2—C4 | 1.901 (4) |
| | | |
C1—Se1—C8i | 98.75 (18) | S1—C4—Se2 | 122.4 (3) |
C5—Se2—C4 | 97.86 (18) | C6—C5—Se2 | 126.7 (3) |
C2—C1—Se1 | 127.5 (4) | S2—C5—Se2 | 121.9 (3) |
S1—C1—Se1 | 120.8 (2) | C7—C8—Se1i | 128.6 (3) |
C3—C4—Se2 | 126.8 (3) | S2—C8—Se1i | 119.8 (3) |
Symmetry code: (i) −x+1, −y+1, −z+2. |
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While the preparation, structural characterization and electrochemical properties of cyclic thiacalix[4]-, thiacalix[5]-, and thiacalix[6]arenes, and of some related species, have been reported (Nakyama et al., 1997; Katano et al., 1998; König et al. 1997a,b; Nakabayashi et al., 1999), no structural information on the analogous cyclic selenacalixarenes has been published to date. Tiecco et al. (2000) have recently demonstrated the formation of related open-chain oligomeric seleno-2,5-thienylenes by treatment of a large excess of thiophene or 2-methylthiophene with an electrophilic selenenylating agent derived from dithienyl diselenide. With only a small excess of thiophene, insoluble polymeric material was obtained.
Upon reinvestigation of this reaction by treating thiophene with a mixture of dithienyl diselenide and PhI(OAc)2 (molar ratio 50:1:2) in acetonitrile, we also obtained, in addition to the insoluble polymer Is this added text OK?, a yellow, sparingly soluble precipitate that partially dissolves in tetrahydrofuran. Yellow crystals of the title compound, (I), {(C4H2S)Se}4, were grown by slow evaporation of the solvent. \sch
The lattice of (I) is composed of discrete cyclic molecules, in which the four thienyl rings are joined together by four approximately coplanar Se bridges (Fig. 1). Selected bond distances and angles are given in Table 1. The asymmetric unit contains one half of the molecule, the other half being completed by symmetry. The C—Se bonds are in the range 1.900 (4)–1.910 (5) Å and show typical single-bond values. Also, the C—C and C—S bonds within the thienyl rings show expected values. The C—Se—C bond angles span a range of 97.9 (2)–98.8 (2)° and are in agreement with the value found in Me2Se (96.18°; Beecher, 1966). The respective C—S bond lengths and C—S—C angles in cyclic [(C4H2S)S]n (n = 4–6) of 1.736–1.768 Å and 100.82–105.15° (Nakayama et al., 1997; Katano et al., 1998) are consistent with the geometric parameters found in (I).
The molecule of (I) exhibits an approximately C2 h molecular symmetry, with the two thienyl rings bound to Se1 exhibiting a syn arrangement, while those bound to Se2 exhibit an anti arrangement. This syn,syn,anti,anti arrangement is also observed in [(C4H2S)S]4 (Katano et al., 1998).
While the molecular structures of [(C4H2S)S]4 (Katano et al., 1998) and (I) are similar, their packing in the lattice is different. While molecules of both (I) and [(C4H2S)S]4 form skewed stacks, the geometry of close chalcogen-chalcogen contacts is different. In the case of (I), the S2···S2 and Se1···S1 contacts [3.649 (2) and 3.472 (2) Å, respectively] form a two-dimensional network (Fig. 2), whereas in [(C4H2S)S]4, the corresponding S···S contacts of 3.396 (9)–3.657 (5) Å assemble the molecules into a three-dimensional lattice (Katano et al., 1998).