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(2R*,4S*)-Methyl 2,3,4,5-tetra­hydro-1,4-ep­oxy-1H-benz[b]azepine-2-carboxyl­ate, C12H13NO3, (I), and its reduction product (2R*,4S*)-methyl 4-hy­droxy-2,3,4,5-tetra­hydro-1H-benz[b]azepine-2-carboxyl­ate, C12H15NO3, (II), both crystallize as single enanti­omers in the space group P212121, while the hydrolysis product (2RS,4SR)-4-hy­droxy-2,3,4,5-tetra­hydro-1H-benz[b]azepine-2-carb­oxy­lic acid, C11H13NO3, (III), and the lactone (2RS,5SR)-8-(trifluoromethoxy)-5,6-dihydro-1H-2,5-methanobenz[e][1,4]oxazocin-3(2H)-one, C12H10F3NO3, (IV), both crystallize as racemic mixtures in the space group P21/c. The mol­ecules of compound (IV) are linked into centrosymmetric R22(10) dimers by N—H...O hydrogen bonds, and those of compound (I) are linked into chains by C—H...π(arene) hydrogen bonds. A combination of O—H...O and O—H...N hydrogen bonds links the mol­ecules of com­pound (III) into sheets containing equal numbers of R44(14) and R44(26) rings, and a combination of C—H...π(arene) hydrogen bonds and three-centre O—H...(N,O) hydrogen bonds links the mol­ecules of compound (II) into a three-dimensional frame­work structure. Comparisons are made with some related compounds.

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Contains datablock I

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Chemical Markup Language (CML) file https://doi.org/10.1107/S2053229614006007/sk3540Isup6.cml
Supplementary material

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Contains datablock II

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Contains datablock III

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Supplementary material

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CCDC references: 992372; 992373; 992374; 992375

Introduction top

We report here the molecular and supra­molecular structures of a series of four closely related benzazepine derivatives, corresponding to the inter­mediates (2R*,4S*)-methyl 2,3,4,5-tetra­hydro-1,4-ep­oxy-1H-benz[b]azepine-2-carboxyl­ate, (I), and (2R*,4S*)-methyl 4-hy­droxy-2,3,4,5-tetra­hydro-1H-benz[b]azepine-2-carboxyl­ate, (II), in the synthetic sequence from a 2-allyl­aniline towards the formation of (2RS,4SR)-4-hy­droxy-2,3,4,5-tetra­hydro-1H-benz[b]azepine-2-carb­oxy­lic acid, (III), together with that of a related tricyclic by-product (2RS,5SR)-8-(tri­fluoro­meth­oxy)-5,6-di­hydro-1H-2,5-methano­benz[e][1,4]oxazocin-3(2H)-one, (IV) (see Scheme 1). Compounds of this type are of importance because of their potential value as anti­parasitic agents (Gómez-Ayala et al., 2010). In this synthetic methodology (Gómez Ayala et al., 2006; Acosta, Palma & Bahsas, 2010; Acosta Qu­intero et al., 2012), methyl 2-[(2-allyl­phenyl)­amino]­acetate was oxidized by aqueous hydrogen peroxide in the presence of a catalytic qu­antity of sodium tungstate to form the epoxide (I). Reduction of (I) with zinc and acetic acid gave the alcohol (II), hydrolysis of which gave the hy­droxy acid (III). On the other hand, similar reduction of the tri­fluoro­meth­oxy derivative (V), analogous to (I) (see Scheme 1), gave as a minor by-product the tricyclic lactone (IV), in addition to the expected alcohol (VI), with a product ratio of ca 1:6. Lactones such as (IV) could also be envisaged as arising by intra­molecular condensation reaction of the corresponding hy­droxy acid. Benzazepin-4-ols similar to compounds (II) and (III) have recently been described having either vinyl substituents (Acosta et al., 2009) or thienyl substituents (Blanco et al., 2009) at position 2.

Experimental top

Synthesis and crystallization top

For the synthesis of compound (I), sodium tungstate dihydrate (10 mol%), followed by 30% aqueous hydrogen peroxide solution (16 mmol), were added to a stirred and cooled (273 K) solution of methyl 2-[(2-allyl­phenyl)­amino]­acetate (4 mmol) in methanol (25 ml). The resulting mixture was then stirred at ambient temperature for 18 h and monitored by thin-layer chromatography (TLC). The mixture was filtered and the solvent was removed under reduced pressure. Toluene (15 ml) was added to the black solid residue and the resulting solution was heated under reflux for 6 h. After cooling the solution to ambient temperature, the solvent was removed under reduced pressure and the crude product was subject to column chromatographic purification over silica gel using heptane–ethyl acetate (10:1 v/v) as eluent. Crystallization from heptane, at ambient temperature and in the presence of air gave colourless crystals of compound (I) suitable for single-crystal X-ray diffraction (yield 48%, m.p. 388–389 K). HRMS, m/z found 219.0899, C12H13NO3 requires 219.0895. For the synthesis of compounds (II) and (IV), zinc powder (40 mmol), glacial acetic acid (28 mmol) and concentrated hydro­chloric acid (28 mmol) were added to a stirred and cooled (273 K) solutions of the corresponding (2RS,4SR)-methyl 2,3,4,5-tetra­hydro-1,4-ep­oxy­benz[b]azepine-2-carboxyl­ates, prepared as for (I) (2 mmol) in methanol (10 ml). The resulting mixtures were stirred at 273 K for 1.5 h, and monitored by TLC. Each mixture was filtered and the filtrate was basified to pH 8 with aqueous ammonia solution (25%), and then extracted with ethyl acetate (3 × 40 ml). For each, the combined organic extracts were dried over anhydrous sodium sulfate and then the solvent was removed under reduced pressure. The resulting crude products were purified by silica-gel column chromatography using heptane–ethyl acetate as eluent (from 3:1 to 1:?? v/v). Crystallization from heptane–ethyl acetate (30:1 v/v) at ambient temperature and in the presence of air gave colourless crystals of (II) and (IV) suitable for single-crystal X-ray diffraction. For (II), yield 87%, m.p. 398–399 K; HRMS, m/z found 221.1054, C12H15NO3 requires 221.1052; for (IV), MS (70 eV) m/z (%) 273 (M+, 40), 228 (100), 214 (28), 202 (34), 201 (31), 188 (6). For the synthesis of compound (III), aqueous sodium hydroxide solution (1 mol dm-3, 0.55 mmol) was added to a stirred solution of compound (II) (0.50 mmol) in methanol (1 ml). The reaction mixture was stirred at 273 K for 30 min. Then hydro­chloric acid solution (1 mol dm-3) was slowly added to the reaction mixture to pH 3.5, and the reaction product was extracted with ethyl acetate (3 × 50 ml). The combined organic extracts were dried over anhydrous sodium sulfate and then the solvent was removed under reduced pressure. The resulting crude product was purified by crystallization, at ambient temperature and in air, from ethyl acetate–methanol (20:1 v/v) to give colourless crystals of (III) suitable for single-crystal X-ray diffraction (yield 84%, m.p. 437–438 K). HRMS, m/z found 207.0905, C11H13NO3 requires 207.0895.

Refinement top

Crystal data, data collection and structure refinement details are summarized in Table 1. All H atoms were located in difference maps and subsequently treated as riding atoms. H atoms bonded to C atoms were permitted to ride a in geometrically idealized positions, with C—H = 0.95 (aromatic), 0.98 (CH3), 0.99 (CH2) or 1.00 Å (aliphatic C—H), and with Uiso(H) = kUeq(C), where k = 1.5 for the methyl groups, which were permitted to rotate but not to tilt, and 1,2 for all other H atoms bonded to C atoms. H atoms bonded to N atoms were permitted to ride at the positions located in difference maps, with Uiso(H) = 1.2Ueq(N), giving the N—H distances shown in Table 3. Several low-angle reflections which had been partially or completely attenuated by the beam stop were omitted from the final refinements: for (I), 101, 012 and 002; for (II), 012; for (III), 011, 110 and -111; for (IV), 011 and 200. The values of the Flack x parameters (Flack, 1983) for compounds (I) and (II) were indeterminate (Flack & Bernardinelli, 2000); the values for (I) and (II), respectively, were -1.0 (14) for 975 Bijvoet pairs (99.3% coverage) and 1(3) for 983 Bijvoet pairs (96.8% coverage); accordingly, the Friedel-equivalent reflections were merged prior to the final refinements and the reference molecules for (I) and (II) were selected as those having the R configuration at atom C2.

Results and discussion top

We report here the molecular and supra­molecular structures of a series of four closely related benzazepine derivatives, corresponding to the inter­mediates (2R*,4S*)-methyl 2,3,4,5-tetra­hydro-1,4-ep­oxy-1H-benz[b]azepine-2-carboxyl­ate, (I), and (2R*,4S*)-methyl 4-hy­droxy-2,3,4,5-tetra­hydro-1H-benz[b]azepine-2-carboxyl­ate, (II), in the synthetic sequence from a 2-allyl­aniline towards the formation of (2RS,4SR)-4-hy­droxy-2,3,4,5-tetra­hydro-1H-benz[b]azepine-2-carb­oxy­lic acid, (III), together with that of a related tricyclic by-product (2RS,5SR)-8-(tri­fluoro­meth­oxy)-5,6-di­hydro-1H-2,5-methano­benz[e][1,4]oxazocin-3(2H)-one, (IV) (see Scheme 1 and Figs. 1–4). Compounds of this type are of importance because of their potential value as anti­parasitic agents (Gómez-Ayala et al., 2010). In this synthetic methodology (Gómez Ayala et al., 2006; Acosta, Palma & Bahsas, 2010; Acosta Qu­intero et al., 2012), methyl 2-[(2-allyl­phenyl)­amino]­acetate was oxidized by aqueous hydrogen peroxide in the presence of a catalytic qu­antity of sodium tungstate to form the epoxide (I). Reduction of (I) with zinc and acetic acid gave the alcohol (II), hydrolysis of which gave the hy­droxy acid (III). On the other hand, similar reduction of the tri­fluoro­meth­oxy derivative (V), analogous to (I) (see Scheme 1), gave as a minor by-product the tricyclic lactone (IV), in addition to the expected alcohol (VI), with a product ratio of ca 1:6. Lactones such as (IV) could also be envisaged as arising by intra­molecular condensation reaction of the corresponding hy­droxy acid. Benzazepin-4-ols similar to compounds (II) and (III) have recently been described having either vinyl substituents (Acosta et al., 2009) or thienyl substituents (Blanco et al., 2009) at position 2.

In each of compounds (I)–(IV), the molecule contains two stereogenic centres and the relative stereochemistry at these two centres is the same in each of compounds (I)–(IV), and the purposes of the present study are threefold: firstly, to confirm the integrity of the relative stereochemistry of compound (I)–(IV) during the transformations described (Scheme 1), as noted above; secondly, to show how minor changes of substituent and/or functionality on a common fused-ring skeleton can lead to significant changes in the patterns of supra­molecular assembly; and thirdly to establish definitively the molecular constitution of compound (IV). For each compound, the reference molecule was selected to be one having the R configuration at atom C2; on this basis, the reference molecules in compounds (I)–(III) all have the S configuration at atom C4, while the reference molecule of compound (IV) has the S configuration at the corresponding atom, here labelled C5 (cf. Figs. 1–4). Compounds (III) and (IV) both crystallize in the space group P21/c as racemic mixtures, but compounds (I) and (II) both crystallize in the Sohnke space group P212121. In the absence of significant resonant scattering, it was not possible to determine the absolute configurations of the molecules of (I) and (II) in the crystals selected for data collection, and hence the configuration of the reference molecules have been assigned to match those selected for the reference molecules in compounds (III) and (IV). In view of both of the synthetic procedures employed for the production of compounds (I) and (II), which utilize no enanti­oselective reagents, and of the racemic nature of compounds (II) and (IV), it seems probable that compounds (I) and (II) are both formed in solution as racemic mixtures, but that they crystallize as conglomerates rather than as racemates.

The H atom of the carb­oxy­lic acid group in compound (III) is fully ordered and the C21—O21 and C21—O22 bond lengths are similar to the corresponding distances in the esters, compounds (I) and (II) (Table 2), and fully consistent with the location of the carb­oxy­lic acid H atom as deduced from a difference map. Despite the markedly pyramidal geometry at atom N1, with a sum of the inter­bond angles of 330° [corresponding values for (II) and (IV) are 343 and 345°, respectively], there is no evidence for any zwitterions formation by transfer of a proton from atom O22 to atom N1. The remaining bond lengths in compounds (I)–(IV) present no unexpected features.

The hydrogen-bonded supra­molecular assembly in compounds (I)–(IV) is of considerable inter­est, as the resulting supra­molecular structures range from a simple dimer in compound (IV), via a chain in compound (I) and a sheet in compound (III) to a three-dimensional framework structure in compound (II). It may be noted here that while the structures of (I)–(IV) encompass a variety of hydrogen-bond types, aromatic ππ stacking inter­actions are absent from all of the structures reported here. It is convenient to consider the supra­molecular assembly in (I)–(IV) in order of increasing complexity.

The crystal structure of compound (IV) contains just one type of hydrogen bond (Table 3) and inversion-related pairs of N—H···O hydrogen bonds link the molecules into centrosymmetric dimers characterized by an R22(10) (Bernstein et al., 1995) motif (Fig. 5). There are no direction-specific inter­actions between adjacent dimers, so that the assembly in finite and thus it can be regarded as zero-dimensional. The supra­molecular assembly in compound (I) is again determined by just one type of hydrogen bond, this time of C—H···π(arene) type (Table 3), which links molecules related by the 21 screw axis along (x, 1/4, 1/2) to form a chain running parallel to the [100] direction (Fig. 6).

The supra­molecular assembly in compound (III) is determined by two hydrogen bonds, one each of the O—H···N and O—H···O types, both of which are nearly linear (Table 3). The N—H bond plays no part in the supra­molecular assembly, making only a short intra­molecular contact with the carbonyl O atom, in which the N—H···O angle (Table 3) is too small for this to be regarded as a structurally significant inter­action, but there are no other potential acceptors within range of atom N1 for plausible inter­molecular hydrogen-bond formation. The action of the O—H···N hydrogen bond, in which the hy­droxy group provides the donor, is to link molecules related by the c-glide plane at y = 0.5 into a C(6) (Bernstein et al., 1995) chain running parallel to the [001] direction. The O—H···O hydrogen bond, where the carb­oxy­lic acid group provides the donor, links molecules related by the 21 screw axis along (0, y, 1/4) into a C(7) chain running parallel to the [010] direction. The combination of the two hydrogen bonds generates a sheet lying parallel to (100) and built from centrosymmetric R44(14) and R44(26) rings arranged in a chessboard pattern (Fig. 7). The smaller rings are centred at (0, m, 0.5+n) and (0, 0. 5+m, n), and the larger rings are centred at (0, m, n) and (0, 0.5+m, 0.5+n), where m and n represent integers in all cases. Although both types of ring in the reference sheet are centred at x = 0, the sheet is markedly puckered, and it occupies the entire domain of x (Fig. 8); there are no direction-specific inter­actions between adjacent sheets. Four molecules, arranged in two inversion-related pairs, contribute to each type of ring. In the smaller R44(14) ring, each of the four component molecules acts as both a hydrogen-bond donor and as a hydrogen-bond acceptor, but in the larger R44(26) ring, one pair of inversion related molecules act as twofold donors of hydrogen bonds while the other pair act as twofold acceptors (Fig. 7).

There are only two independent hydrogen bonds in the structure of compound (II); one is a planar three-centre O—H···(N,O) hydrogen bond and the other is a C—H···π(arene) hydrogen bond (Table 3). However, these two inter­actions generate a three-dimensional framework structure, whose formation is readily analysed in terms of three one-dimensional substructures (Ferguson et al., 1998a,b; Gregson et al., 2000). The three-centre hydrogen bond, when acting alone, links molecules related by the 21 screw axis along (1/2, y, 1/4) into a C(6)C(7)[R12(5)] chain of rings (Bernstein et al., 1995) running parallel to the [010] direction (Fig. 9). The C—H···π(arene) hydrogen bond, again when acting alone, is to link molecules related by the 21screw axis along (x, 3/4, 0) into a chain running parallel to the [100] direction (Fig. 10). In combination, the two types of hydrogen bond generate a chain running parallel to the [001] direction in which the O—H···(N,O) and C—H···π(arene) hydrogen bonds alternate (Fig. 11). The combination of the chains along [100], [010] and [001] is sufficient to generate a continuous three-dimensional structure.

It is of inter­est briefly to compare the supra­molecular assembly in compounds (I)–(IV) reported here with that in some related compounds. In simple 1,4-ep­oxy-1-benzazepines analogous to compound (I), the direction-specific inter­molecular inter­actions are generally restricted to C—H···O and C—H···π(arene) hydrogen bonds, along with aromatic ππ stacking inter­actions but, nonetheless, these inter­actions can give rise to supra­molecular assembly in zero, one, two or three dimensions (e.g. Gómez et al., 2008, 2009; Acosta, Palma, Bahsas et al., 2010; Sanabria et al., 2010). Compounds (VII)–(IX) (see Scheme 2) (Acosta et al., 2009), which are analogues of compound (II), are isomorphous but not strictly isostructural, as small variations in the unit-cell imensions preclude in the structure of compound (IX) one of the inter­molecular inter­actions present in the structures of compounds (VII) and (VIII). In the structure of (IX), a combination of O—H···N and N—H···O hydrogen bonds gives rise to a chain of edge-fused R33(10) rings: similar chains are present also in compounds (VII) and (VIII) where, in addition, they are linked into sheets by C—H···π(arene) hydrogen bonds. Compounds (X) and (XI) both crystallize with Z' = 2 in the space group P1 (Blanco et al., 2012); in both compounds, the hy­droxy H atoms are all disordered over two sites with equal occupancy, and O—H···O hydrogen bonds give rise to C44(8) chains within which the locations of the hy­droxy H atoms are fully correlated, but with no necessary correlation of the directions of the hydrogen bonds in adjacent chains. An isolated example of a 1-benzazepine derivative carrying both a hy­droxy substituent and a non-esterified carb­oxy­lic acid group, and hence comparable with compound (III), is provided by 1-acetyl-4-benzoyl-2-hy­droxy-2,3,4,5-tetra­hydro-1H-benz[b]azepine-5-carb­oxy­lic acid, (XII) [Cambridge Structural Database (CSD; Allen, 2002) refcode DOJJER; Coda et al., 1986]. Unfortunately, the atomic coordinates deposited in the CSD do not include any H atoms, while the non-H atoms of the asymmetric unit are distributed amongst three separate molecules. However, the C—O distances of the carb­oxy­lic acid group (1.211 and 1.320 Å, no s.u. values available) indicate the presence of an un-ionized –COOH unit. Based on this conclusion and an examination of the inter­molecular N···O and O···O distances, the main features of the supra­molecular assembly can be deduced, despite the absence of any H-atom coordinates; the carb­oxy­lic acid OH group acts as hydrogen-bond donor to the amidic O atom, and the hydroxyl group acts as hydrogen-bond donor to the carbonyl O atom of the carb­oxy­lic acid group, but the N atom plays no part in the supra­molecular assembly. Overall, molecules related by a 21 screw axis along [001] are linked by these two hydrogen bonds to form a C(8)C(9)[R22(10)] chain of rings running parallel to the [001] direction (Fig. 12).

In summary, we have demonstrated the preservation of the relative stereochemistry throughout the reactiom sequence from compound (I), we have established the molecular constitution of compound (IV) and we have shown how minor changes in molecular constitution in the related compounds (I)–(XII) can lead to marked changes in supra­molecular assembly.

Related literature top

For related literature, see: Acosta et al. (2009); Acosta Quintero, Palma, Nogueras & Cobo (2012); Acosta, Palma & Bahsas (2010); Acosta, Palma, Bahsas, Cobo & Glidewell (2010); Allen (2002); Bernstein et al. (1995); Blanco et al. (2009, 2012); Coda et al. (1986); Ferguson et al. (1998a, 1998b); Flack (1983); Flack & Bernardinelli (2000); Gómez et al. (2008, 2009); Gómez Ayala, Stashenko, Palma, Bahsas & Amaro-Luis (2006); Gómez-Ayala, Castrillón, Palma, Leal, Escobar & Bahsas (2010); Gregson et al. (2000); Sanabria et al. (2010).

Computing details top

For all compounds, data collection: COLLECT (Hooft, 1998); cell refinement: DIRAX/LSQ (Duisenberg et al., 2000); data reduction: EVALCCD (Duisenberg et al., 2003); program(s) used to solve structure: SIR2004 (Burla et al., 2005); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009). Software used to prepare material for publication: SHELXL97(Sheldrick, 2008) and PLATON (Spek, 2009) for (I); SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009) for (II), (III), (IV).

Figures top
[Figure 1] Fig. 1. The molecular structure of the (2R,4S) enantiomer of compound (I), showing the atom-labelling scheme. Displacement ellipsoids are drawn at the 30% probability level.
[Figure 2] Fig. 2. The molecular structure of the (2R,4S) enantiomer of compound (II), showing the atom-labelling scheme. Displacement ellipsoids are drawn at the 30% probability level.
[Figure 3] Fig. 3. The molecular structure of the (2R,4S) enantiomer of compound (III), showing the atom-labelling scheme. Displacement ellipsoids are drawn at the 30% probability level.
[Figure 4] Fig. 4. The molecular structure of the (2R,5S) enantiomer of compound (IV), showing the atom-labelling scheme. Displacement ellipsoids are drawn at the 30% probability level.
[Figure 5] Fig. 5. Part of the crystal structure of compound (IV), showing the formation of a centrosymmetric R22(10) dimer built from paired N—H···O hydrogen bonds. For the sake of clarity, H atoms not involved in the motif shown have been omitted. Atoms marked with an asterisk (*) are at the symmetry position (-x+1, -y+1, -z+1).
[Figure 6] Fig. 6. A stereoview of part of the crystal structure of compound (I), showing the formation of a chain along [100] built from C—H···π(arene) hydrogen bonds. For the sake of clarity, H atoms not involved in the motif shown have been omitted.
[Figure 7] Fig. 7. A stereoview of part of the crystal structure of compound (III), showing the formation of a hydrogen-bonded sheet parallel to (100) and built from R44(14) and R44(26) rings. For the sake of clarity, H atoms bonded to C or N atoms have been omitted.
[Figure 8] Fig. 8. A projection of a sheet in compound (III), parallel to (100) and viewed along [001], showing the puckering of the sheet. For the sake of clarity, H atoms bonded to C or N atoms have been omitted.
[Figure 9] Fig. 9. Part of the crystal structure of compound (II), showing the formation of a chain of rings along [010] built from three-centre O—H···(N,O) hydrogen bonds. For the sake of clarity, H atoms not involved in the motif shown have been omitted. Atoms marked with an asterisk (*) or a hash(#) are at the symmetry positions (-x+1, y-1/2, -z+1/2) and (-x+1, y+1/2, -z+1/2), respectively.
[Figure 10] Fig. 10. A stereoview of part of the crystal structure of compound (II), showing the formation of a chain along [100] built from C—H···π(arene) hydrogen bonds. For the sake of clarity, H atoms not involved in the motif shown have been omitted.
[Figure 11] Fig. 11. A stereoview of part of the crystal structure of compound (II), showing the formation of a chain along [001] in which the O—H···(N,O) and C—H···π(arene) hydrogen bonds alternate. For the sake of clarity, H atoms not involved in the motif shown have been omitted.
[Figure 12] Fig. 12. Part of the crystal structure of compound (XII), showing the formation of a C(8)C(9)[R22(10)] chain of rings running parallel to [001]. The original atomic coordinates (Coda et al., 1986) were used, modified by translations to assemble the asymmetric unit into a single molecule. H atoms bonded to O atoms are in positions calculated by assuming O—H distances of 0.85 Å and linear O—H···O hydrogen bonds. For the sake of clarity, the unit-cell outline has been omitted. Atoms marked with an asterisk (*) or a hash (#) are at the symmetry positions (-x+3/2, -y, z-1/2) and (-x+3/2, -y, z+1/2), respectively.
(I) (2R*,4S*)-Methyl 2,3,4,5-tetrahydro-1,4-epoxy-1H-benz[b]azepine-2-carboxylate top
Crystal data top
C12H13NO3F(000) = 464
Mr = 219.23Dx = 1.413 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 1378 reflections
a = 6.8549 (6) Åθ = 3.1–27.5°
b = 11.4483 (12) ŵ = 0.10 mm1
c = 13.1369 (14) ÅT = 120 K
V = 1030.94 (18) Å3Block, colourless
Z = 40.22 × 0.20 × 0.12 mm
Data collection top
Bruker–Nonius KappaCCD
diffractometer
1375 independent reflections
Radiation source: Bruker–Nonius FR591 rotating anode1089 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.077
Detector resolution: 9.091 pixels mm-1θmax = 27.5°, θmin = 3.5°
ϕ & ω scansh = 88
Absorption correction: multi-scan
(SADABS; Sheldrick, 2003)
k = 1413
Tmin = 0.835, Tmax = 0.988l = 1716
12257 measured reflections
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.083H-atom parameters constrained
S = 1.15 w = 1/[σ2(Fo2) + (0.0318P)2 + 0.2372P]
where P = (Fo2 + 2Fc2)/3
1375 reflections(Δ/σ)max = 0.001
146 parametersΔρmax = 0.20 e Å3
0 restraintsΔρmin = 0.21 e Å3
Crystal data top
C12H13NO3V = 1030.94 (18) Å3
Mr = 219.23Z = 4
Orthorhombic, P212121Mo Kα radiation
a = 6.8549 (6) ŵ = 0.10 mm1
b = 11.4483 (12) ÅT = 120 K
c = 13.1369 (14) Å0.22 × 0.20 × 0.12 mm
Data collection top
Bruker–Nonius KappaCCD
diffractometer
1375 independent reflections
Absorption correction: multi-scan
(SADABS; Sheldrick, 2003)
1089 reflections with I > 2σ(I)
Tmin = 0.835, Tmax = 0.988Rint = 0.077
12257 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0430 restraints
wR(F2) = 0.083H-atom parameters constrained
S = 1.15Δρmax = 0.20 e Å3
1375 reflectionsΔρmin = 0.21 e Å3
146 parameters
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
N10.5882 (3)0.53959 (17)0.62664 (15)0.0169 (5)
C20.7808 (4)0.4788 (2)0.63363 (18)0.0172 (6)
H20.80290.42830.57260.021*
C30.7668 (4)0.4041 (2)0.73108 (18)0.0207 (6)
H3A0.75480.32010.71440.025*
H3B0.88240.41580.77510.025*
C40.5806 (4)0.4499 (2)0.78270 (18)0.0203 (6)
H40.60230.46080.85740.024*
C50.4015 (4)0.3748 (2)0.76360 (17)0.0208 (6)
H5A0.42940.29280.78280.025*
H5B0.29150.40290.80590.025*
C5A0.3467 (4)0.3809 (2)0.65235 (18)0.0169 (5)
C60.2051 (4)0.3078 (2)0.61025 (19)0.0188 (6)
H60.13660.25470.65280.023*
C70.1629 (4)0.3117 (2)0.50650 (19)0.0196 (6)
H70.06500.26230.47890.024*
C80.2638 (4)0.3878 (2)0.44358 (19)0.0190 (5)
H80.23740.38910.37260.023*
C90.4031 (4)0.4619 (2)0.48420 (18)0.0174 (6)
H90.47190.51440.44130.021*
C9A0.4419 (4)0.4592 (2)0.58782 (17)0.0147 (5)
O140.5459 (3)0.56224 (15)0.73310 (12)0.0193 (4)
C210.9367 (4)0.5730 (2)0.64079 (19)0.0176 (5)
O211.0154 (3)0.60550 (17)0.71760 (13)0.0269 (5)
O220.9732 (3)0.61892 (15)0.54844 (12)0.0210 (4)
C221.1153 (4)0.7122 (2)0.5470 (2)0.0247 (6)
H22A1.06720.77800.58760.037*
H22B1.13660.73780.47670.037*
H22C1.23860.68410.57570.037*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
N10.0182 (11)0.0168 (11)0.0156 (10)0.0001 (9)0.0006 (9)0.0026 (9)
C20.0162 (13)0.0163 (13)0.0190 (12)0.0030 (10)0.0024 (11)0.0005 (11)
C30.0244 (13)0.0191 (14)0.0186 (12)0.0001 (12)0.0036 (12)0.0026 (11)
C40.0287 (15)0.0187 (13)0.0135 (11)0.0007 (12)0.0005 (11)0.0009 (10)
C50.0266 (14)0.0203 (13)0.0155 (12)0.0030 (12)0.0055 (11)0.0004 (11)
C5A0.0184 (13)0.0140 (12)0.0184 (12)0.0055 (11)0.0041 (10)0.0011 (11)
C60.0175 (13)0.0156 (13)0.0233 (13)0.0006 (11)0.0049 (11)0.0001 (11)
C70.0158 (13)0.0166 (13)0.0264 (13)0.0000 (11)0.0007 (11)0.0043 (11)
C80.0187 (12)0.0182 (12)0.0202 (12)0.0038 (12)0.0013 (11)0.0022 (12)
C90.0156 (12)0.0160 (13)0.0207 (13)0.0032 (11)0.0014 (10)0.0052 (10)
C9A0.0137 (12)0.0113 (12)0.0192 (12)0.0025 (10)0.0003 (10)0.0004 (10)
O140.0247 (10)0.0185 (9)0.0149 (9)0.0019 (8)0.0020 (8)0.0034 (7)
C210.0160 (12)0.0174 (12)0.0195 (12)0.0043 (11)0.0006 (11)0.0025 (10)
O210.0277 (10)0.0335 (11)0.0195 (9)0.0079 (9)0.0050 (9)0.0052 (9)
O220.0224 (9)0.0216 (9)0.0189 (8)0.0067 (9)0.0019 (8)0.0006 (8)
C220.0236 (14)0.0214 (13)0.0292 (14)0.0066 (12)0.0018 (12)0.0018 (12)
Geometric parameters (Å, º) top
N1—O141.452 (2)C5A—C61.396 (4)
N1—C9A1.454 (3)C6—C71.394 (3)
N1—C21.496 (3)C6—H60.9500
C2—C211.521 (3)C7—C81.386 (4)
C2—C31.543 (3)C7—H70.9500
C2—H21.0000C8—C91.384 (4)
C3—C41.537 (4)C8—H80.9500
C3—H3A0.9900C9—C9A1.387 (3)
C3—H3B0.9900C9—H90.9500
C4—O141.461 (3)C21—O211.203 (3)
C4—C51.520 (4)C21—O221.346 (3)
C4—H41.0000O22—C221.446 (3)
C5—C5A1.511 (3)C22—H22A0.9800
C5—H5A0.9900C22—H22B0.9800
C5—H5B0.9900C22—H22C0.9800
C5A—C9A1.395 (3)
O14—N1—C9A108.26 (17)C9A—C5A—C5120.1 (2)
O14—N1—C2101.56 (17)C6—C5A—C5121.9 (2)
C9A—N1—C2109.64 (18)C7—C6—C5A120.8 (2)
N1—C2—C21107.10 (19)C7—C6—H6119.6
N1—C2—C3104.7 (2)C5A—C6—H6119.6
C21—C2—C3112.7 (2)C8—C7—C6120.0 (3)
N1—C2—H2110.7C8—C7—H7120.0
C21—C2—H2110.7C6—C7—H7120.0
C3—C2—H2110.7C9—C8—C7120.0 (2)
C4—C3—C2103.2 (2)C9—C8—H8120.0
C4—C3—H3A111.1C7—C8—H8120.0
C2—C3—H3A111.1C8—C9—C9A119.8 (2)
C4—C3—H3B111.1C8—C9—H9120.1
C2—C3—H3B111.1C9A—C9—H9120.1
H3A—C3—H3B109.1C9—C9A—C5A121.4 (2)
O14—C4—C5107.0 (2)C9—C9A—N1117.5 (2)
O14—C4—C3103.83 (19)C5A—C9A—N1121.1 (2)
C5—C4—C3113.9 (2)N1—O14—C4103.88 (17)
O14—C4—H4110.6O21—C21—O22123.5 (2)
C5—C4—H4110.6O21—C21—C2125.9 (2)
C3—C4—H4110.6O22—C21—C2110.6 (2)
C5A—C5—C4109.5 (2)C21—O22—C22115.18 (19)
C5A—C5—H5A109.8O22—C22—H22A109.5
C4—C5—H5A109.8O22—C22—H22B109.5
C5A—C5—H5B109.8H22A—C22—H22B109.5
C4—C5—H5B109.8O22—C22—H22C109.5
H5A—C5—H5B108.2H22A—C22—H22C109.5
C9A—C5A—C6118.0 (2)H22B—C22—H22C109.5
O14—N1—C2—C2183.6 (2)C6—C5A—C9A—C92.3 (4)
C9A—N1—C2—C21162.07 (19)C5—C5A—C9A—C9176.1 (2)
O14—N1—C2—C336.3 (2)C6—C5A—C9A—N1178.8 (2)
C9A—N1—C2—C378.1 (2)C5—C5A—C9A—N12.8 (3)
N1—C2—C3—C411.5 (2)O14—N1—C9A—C9154.2 (2)
C21—C2—C3—C4104.5 (2)C2—N1—C9A—C995.8 (3)
C2—C3—C4—O1417.3 (2)O14—N1—C9A—C5A26.9 (3)
C2—C3—C4—C598.7 (2)C2—N1—C9A—C5A83.1 (3)
O14—C4—C5—C5A47.3 (2)C9A—N1—O14—C466.8 (2)
C3—C4—C5—C5A66.8 (3)C2—N1—O14—C448.6 (2)
C4—C5—C5A—C9A7.6 (3)C5—C4—O14—N179.5 (2)
C4—C5—C5A—C6170.8 (2)C3—C4—O14—N141.2 (2)
C9A—C5A—C6—C71.1 (4)N1—C2—C21—O2199.8 (3)
C5—C5A—C6—C7177.3 (2)C3—C2—C21—O2114.8 (3)
C5A—C6—C7—C80.8 (4)N1—C2—C21—O2278.7 (2)
C6—C7—C8—C91.6 (4)C3—C2—C21—O22166.7 (2)
C7—C8—C9—C9A0.4 (4)O21—C21—O22—C220.3 (3)
C8—C9—C9A—C5A1.6 (4)C2—C21—O22—C22178.2 (2)
C8—C9—C9A—N1179.4 (2)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
C7—H7···Cg1i0.952.483.409 (3)165
Symmetry code: (i) x1/2, y+1/2, z+1.
(II) (2R*,4S*)-Methyl 4-hydroxy-2,3,4,5-tetrahydro-1H-benz[b]azepine-2-carboxylate top
Crystal data top
C12H15NO3F(000) = 472
Mr = 221.25Dx = 1.372 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 1425 reflections
a = 6.2528 (13) Åθ = 3.1–27.5°
b = 10.758 (3) ŵ = 0.10 mm1
c = 15.927 (5) ÅT = 120 K
V = 1071.4 (5) Å3Block, colourless
Z = 40.25 × 0.16 × 0.12 mm
Data collection top
Bruker–Nonius KappaCCD
diffractometer
1424 independent reflections
Radiation source: Bruker–Nonius FR591 rotating anode1117 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.090
Detector resolution: 9.091 pixels mm-1θmax = 27.5°, θmin = 3.5°
ϕ & ω scansh = 77
Absorption correction: multi-scan
(SADABS; Sheldrick, 2003)
k = 1312
Tmin = 0.616, Tmax = 0.988l = 2020
12235 measured reflections
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.069Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.187H-atom parameters constrained
S = 1.19 w = 1/[σ2(Fo2) + (0.0725P)2 + 1.5397P]
where P = (Fo2 + 2Fc2)/3
1424 reflections(Δ/σ)max = 0.001
146 parametersΔρmax = 0.58 e Å3
0 restraintsΔρmin = 0.34 e Å3
Crystal data top
C12H15NO3V = 1071.4 (5) Å3
Mr = 221.25Z = 4
Orthorhombic, P212121Mo Kα radiation
a = 6.2528 (13) ŵ = 0.10 mm1
b = 10.758 (3) ÅT = 120 K
c = 15.927 (5) Å0.25 × 0.16 × 0.12 mm
Data collection top
Bruker–Nonius KappaCCD
diffractometer
1424 independent reflections
Absorption correction: multi-scan
(SADABS; Sheldrick, 2003)
1117 reflections with I > 2σ(I)
Tmin = 0.616, Tmax = 0.988Rint = 0.090
12235 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0690 restraints
wR(F2) = 0.187H-atom parameters constrained
S = 1.19Δρmax = 0.58 e Å3
1424 reflectionsΔρmin = 0.34 e Å3
146 parameters
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
N10.7715 (6)0.7491 (4)0.1659 (2)0.0189 (8)
H10.87710.80020.15400.023*
C20.7976 (7)0.6958 (4)0.2502 (3)0.0181 (10)
H20.86970.61330.24430.022*
C30.5864 (7)0.6757 (5)0.2961 (3)0.0222 (10)
H3A0.61640.65340.35530.027*
H3B0.50460.75450.29620.027*
C40.4505 (8)0.5742 (5)0.2565 (3)0.0247 (11)
H40.53560.49580.25190.030*
O40.2758 (6)0.5563 (4)0.3138 (2)0.0399 (11)
H410.21020.47510.30320.060*
C50.3632 (8)0.6105 (5)0.1700 (3)0.0260 (11)
H5A0.24000.55610.15690.031*
H5B0.30930.69690.17310.031*
C5A0.5220 (7)0.6021 (5)0.0987 (3)0.0198 (9)
C60.4727 (8)0.5318 (5)0.0278 (3)0.0236 (10)
H60.34460.48420.02760.028*
C70.6033 (8)0.5284 (5)0.0425 (3)0.0236 (11)
H70.56220.48200.09070.028*
C80.7956 (8)0.5938 (4)0.0416 (3)0.0205 (10)
H80.88810.59140.08890.025*
C90.8512 (8)0.6625 (4)0.0288 (3)0.0192 (10)
H90.98250.70690.02940.023*
C9A0.7168 (8)0.6674 (4)0.0988 (3)0.0177 (9)
C210.9463 (8)0.7813 (4)0.2990 (3)0.0232 (10)
O211.0501 (9)0.8637 (4)0.2670 (2)0.0466 (12)
O220.9470 (6)0.7562 (3)0.38004 (19)0.0253 (8)
C221.1035 (8)0.8224 (5)0.4304 (3)0.0275 (12)
H22A1.24790.80080.41140.041*
H22B1.08700.79900.48950.041*
H22C1.08140.91220.42430.041*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
N10.022 (2)0.0165 (18)0.0184 (19)0.0040 (18)0.0017 (15)0.0002 (16)
C20.016 (2)0.025 (2)0.0129 (19)0.004 (2)0.0003 (18)0.0010 (18)
C30.013 (2)0.029 (3)0.024 (2)0.003 (2)0.0037 (19)0.001 (2)
C40.016 (2)0.040 (3)0.018 (2)0.009 (2)0.0044 (19)0.002 (2)
O40.023 (2)0.064 (3)0.033 (2)0.014 (2)0.0091 (17)0.000 (2)
C50.013 (2)0.043 (3)0.022 (2)0.002 (2)0.0022 (19)0.002 (2)
C5A0.012 (2)0.027 (2)0.020 (2)0.0001 (19)0.0006 (18)0.0016 (18)
C60.017 (2)0.026 (2)0.028 (2)0.000 (2)0.005 (2)0.003 (2)
C70.029 (3)0.022 (2)0.019 (2)0.003 (2)0.007 (2)0.0046 (19)
C80.021 (2)0.024 (2)0.017 (2)0.003 (2)0.0002 (19)0.0014 (18)
C90.015 (2)0.017 (2)0.025 (2)0.0032 (18)0.0001 (19)0.0035 (19)
C9A0.020 (2)0.018 (2)0.015 (2)0.000 (2)0.0032 (18)0.0018 (17)
C210.023 (2)0.024 (2)0.023 (2)0.005 (2)0.005 (2)0.0032 (19)
O210.073 (3)0.042 (2)0.0241 (19)0.037 (2)0.001 (2)0.0010 (17)
O220.0260 (17)0.0295 (18)0.0204 (16)0.0080 (17)0.0034 (14)0.0028 (14)
C220.025 (3)0.033 (3)0.024 (2)0.007 (2)0.005 (2)0.008 (2)
Geometric parameters (Å, º) top
N1—C9A1.426 (6)C5A—C61.394 (6)
N1—C21.469 (5)C5A—C9A1.406 (7)
N1—H10.8798C6—C71.386 (7)
C2—C211.522 (7)C6—H60.9500
C2—C31.525 (6)C7—C81.393 (7)
C2—H21.0000C7—H70.9500
C3—C41.521 (7)C8—C91.387 (6)
C3—H3A0.9900C8—H80.9500
C3—H3B0.9900C9—C9A1.397 (6)
C4—O41.436 (6)C9—H90.9500
C4—C51.533 (7)C21—O211.211 (6)
C4—H41.0000C21—O221.318 (6)
O4—H410.9800O22—C221.452 (6)
C5—C5A1.512 (6)C22—H22A0.9800
C5—H5A0.9900C22—H22B0.9800
C5—H5B0.9900C22—H22C0.9800
C9A—N1—C2118.1 (4)C6—C5A—C9A117.6 (4)
C9A—N1—H1113.8C6—C5A—C5119.7 (4)
C2—N1—H1111.0C9A—C5A—C5122.6 (4)
N1—C2—C21107.4 (4)C7—C6—C5A122.6 (4)
N1—C2—C3113.4 (4)C7—C6—H6118.7
C21—C2—C3111.7 (4)C5A—C6—H6118.7
N1—C2—H2108.1C6—C7—C8119.1 (4)
C21—C2—H2108.1C6—C7—H7120.5
C3—C2—H2108.1C8—C7—H7120.5
C4—C3—C2112.7 (4)C9—C8—C7119.6 (4)
C4—C3—H3A109.0C9—C8—H8120.2
C2—C3—H3A109.0C7—C8—H8120.2
C4—C3—H3B109.0C8—C9—C9A120.9 (4)
C2—C3—H3B109.0C8—C9—H9119.5
H3A—C3—H3B107.8C9A—C9—H9119.5
O4—C4—C3104.9 (4)C9—C9A—C5A120.1 (4)
O4—C4—C5109.5 (4)C9—C9A—N1118.5 (4)
C3—C4—C5112.9 (4)C5A—C9A—N1121.1 (4)
O4—C4—H4109.8O21—C21—O22124.1 (5)
C3—C4—H4109.8O21—C21—C2123.7 (4)
C5—C4—H4109.8O22—C21—C2112.2 (4)
C4—O4—H41109.2C21—O22—C22116.2 (4)
C5A—C5—C4115.3 (4)O22—C22—H22A109.5
C5A—C5—H5A108.5O22—C22—H22B109.5
C4—C5—H5A108.5H22A—C22—H22B109.5
C5A—C5—H5B108.5O22—C22—H22C109.5
C4—C5—H5B108.5H22A—C22—H22C109.5
H5A—C5—H5B107.5H22B—C22—H22C109.5
C9A—N1—C2—C21154.8 (4)C8—C9—C9A—C5A0.0 (7)
C9A—N1—C2—C381.3 (5)C8—C9—C9A—N1173.8 (4)
N1—C2—C3—C468.2 (5)C6—C5A—C9A—C91.4 (6)
C21—C2—C3—C4170.3 (4)C5—C5A—C9A—C9175.9 (4)
C2—C3—C4—O4172.1 (4)C6—C5A—C9A—N1175.0 (4)
C2—C3—C4—C568.7 (5)C5—C5A—C9A—N12.2 (7)
O4—C4—C5—C5A165.8 (4)C2—N1—C9A—C9123.1 (5)
C3—C4—C5—C5A77.6 (6)C2—N1—C9A—C5A63.2 (6)
C4—C5—C5A—C6125.6 (5)N1—C2—C21—O2112.0 (7)
C4—C5—C5A—C9A57.3 (6)C3—C2—C21—O21136.9 (5)
C9A—C5A—C6—C72.7 (7)N1—C2—C21—O22167.3 (4)
C5—C5A—C6—C7174.6 (5)C3—C2—C21—O2242.4 (6)
C5A—C6—C7—C82.5 (7)O21—C21—O22—C228.0 (8)
C6—C7—C8—C91.0 (7)C2—C21—O22—C22172.6 (4)
C7—C8—C9—C9A0.2 (7)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
O4—H41···O21i0.982.313.178 (6)147
O4—H41···N1i0.982.483.334 (6)145
C9—H9···Cg1ii0.952.553.350 (5)142
Symmetry codes: (i) x+1, y1/2, z+1/2; (ii) x+1/2, y+3/2, z.
(III) (2RS,4SR)-4-Hydroxy-2,3,4,5-tetrahydro-1H-benz[b]azepine-2-carboxylic acid top
Crystal data top
C11H13NO3F(000) = 440
Mr = 207.22Dx = 1.391 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2263 reflections
a = 9.4389 (5) Åθ = 2.8–27.5°
b = 11.9081 (5) ŵ = 0.10 mm1
c = 9.2702 (4) ÅT = 120 K
β = 108.275 (3)°Block, colourless
V = 989.41 (8) Å30.25 × 0.22 × 0.18 mm
Z = 4
Data collection top
Bruker–Nonius KappaCCD
diffractometer
2260 independent reflections
Radiation source: Bruker–Nonius FR591 rotating anode1411 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.075
Detector resolution: 9.091 pixels mm-1θmax = 27.5°, θmin = 4.1°
ϕ & ω scansh = 1212
Absorption correction: multi-scan
(SADABS; Sheldrick, 2003)
k = 1515
Tmin = 0.724, Tmax = 0.982l = 1212
16576 measured reflections
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.048Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.119H-atom parameters constrained
S = 1.08 w = 1/[σ2(Fo2) + (0.0438P)2 + 0.515P]
where P = (Fo2 + 2Fc2)/3
2260 reflections(Δ/σ)max = 0.001
136 parametersΔρmax = 0.25 e Å3
0 restraintsΔρmin = 0.29 e Å3
Crystal data top
C11H13NO3V = 989.41 (8) Å3
Mr = 207.22Z = 4
Monoclinic, P21/cMo Kα radiation
a = 9.4389 (5) ŵ = 0.10 mm1
b = 11.9081 (5) ÅT = 120 K
c = 9.2702 (4) Å0.25 × 0.22 × 0.18 mm
β = 108.275 (3)°
Data collection top
Bruker–Nonius KappaCCD
diffractometer
2260 independent reflections
Absorption correction: multi-scan
(SADABS; Sheldrick, 2003)
1411 reflections with I > 2σ(I)
Tmin = 0.724, Tmax = 0.982Rint = 0.075
16576 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0480 restraints
wR(F2) = 0.119H-atom parameters constrained
S = 1.08Δρmax = 0.25 e Å3
2260 reflectionsΔρmin = 0.29 e Å3
136 parameters
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
N10.31915 (16)0.43639 (13)0.16425 (18)0.0189 (4)
H10.31340.48500.09400.023*
C20.2315 (2)0.48806 (16)0.2543 (2)0.0186 (4)
H20.30090.53220.33900.022*
C30.1533 (2)0.39999 (17)0.3228 (2)0.0198 (4)
H3A0.08710.43890.37100.024*
H3B0.08970.35270.23980.024*
C40.2594 (2)0.32434 (16)0.4402 (2)0.0189 (4)
H40.31550.37070.52990.023*
O40.16312 (14)0.24735 (12)0.48549 (16)0.0218 (3)
H410.21500.20230.54640.033*
C50.3703 (2)0.25765 (16)0.3849 (2)0.0198 (4)
H5A0.41410.19850.46080.024*
H5B0.31410.21940.28920.024*
C5A0.4971 (2)0.32279 (16)0.3567 (2)0.0188 (4)
C60.6453 (2)0.29549 (18)0.4340 (2)0.0227 (5)
H60.66610.23950.51080.027*
C70.7634 (2)0.34807 (18)0.4015 (2)0.0245 (5)
H70.86340.32730.45470.029*
C80.7343 (2)0.43083 (18)0.2911 (2)0.0242 (5)
H80.81420.46650.26720.029*
C90.5879 (2)0.46130 (17)0.2155 (2)0.0225 (5)
H90.56800.51890.14090.027*
C9A0.4699 (2)0.40855 (16)0.2477 (2)0.0189 (4)
C210.1217 (2)0.56892 (16)0.1495 (2)0.0191 (4)
O210.12155 (15)0.58915 (11)0.02143 (16)0.0235 (4)
O220.03051 (15)0.61649 (12)0.21547 (16)0.0243 (3)
H220.02910.66630.14710.029*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
N10.0193 (9)0.0187 (9)0.0184 (9)0.0008 (7)0.0056 (7)0.0019 (7)
C20.0176 (10)0.0184 (10)0.0193 (10)0.0008 (8)0.0050 (8)0.0019 (8)
C30.0173 (9)0.0208 (10)0.0209 (10)0.0000 (8)0.0056 (8)0.0011 (8)
C40.0199 (10)0.0176 (10)0.0198 (10)0.0033 (8)0.0071 (8)0.0010 (8)
O40.0200 (7)0.0221 (7)0.0222 (8)0.0018 (6)0.0054 (6)0.0039 (6)
C50.0216 (10)0.0184 (10)0.0200 (11)0.0012 (8)0.0074 (8)0.0011 (8)
C5A0.0198 (10)0.0191 (10)0.0191 (10)0.0014 (8)0.0082 (8)0.0020 (8)
C60.0239 (11)0.0224 (11)0.0215 (11)0.0034 (9)0.0066 (9)0.0011 (9)
C70.0178 (10)0.0279 (11)0.0254 (12)0.0037 (9)0.0036 (8)0.0033 (9)
C80.0210 (10)0.0257 (11)0.0268 (11)0.0038 (9)0.0088 (9)0.0043 (9)
C90.0248 (11)0.0218 (11)0.0221 (11)0.0003 (9)0.0091 (9)0.0010 (9)
C9A0.0194 (10)0.0188 (10)0.0181 (10)0.0020 (8)0.0053 (8)0.0026 (8)
C210.0185 (10)0.0154 (10)0.0219 (11)0.0023 (8)0.0040 (8)0.0026 (8)
O210.0236 (8)0.0232 (8)0.0235 (8)0.0007 (6)0.0070 (6)0.0029 (6)
O220.0257 (8)0.0245 (8)0.0231 (8)0.0077 (6)0.0082 (6)0.0019 (6)
Geometric parameters (Å, º) top
N1—C9A1.429 (2)C5—H5B0.9900
N1—C21.481 (2)C5A—C61.395 (3)
N1—H10.8600C5A—C9A1.403 (3)
C2—C211.521 (3)C6—C71.392 (3)
C2—C31.530 (3)C6—H60.9500
C2—H21.0000C7—C81.385 (3)
C3—C41.522 (3)C7—H70.9500
C3—H3A0.9900C8—C91.388 (3)
C3—H3B0.9900C8—H80.9500
C4—O41.443 (2)C9—C9A1.390 (3)
C4—C51.525 (3)C9—H90.9500
C4—H41.0000C21—O211.211 (2)
O4—H410.8201C21—O221.329 (2)
C5—C5A1.516 (3)O22—H220.9200
C5—H5A0.9900
C9A—N1—C2115.39 (15)C5A—C5—H5B108.1
C9A—N1—H1112.4C4—C5—H5B108.1
C2—N1—H1103.5H5A—C5—H5B107.3
N1—C2—C21107.00 (15)C6—C5A—C9A117.82 (18)
N1—C2—C3112.13 (16)C6—C5A—C5120.72 (18)
C21—C2—C3112.21 (15)C9A—C5A—C5121.40 (17)
N1—C2—H2108.5C7—C6—C5A121.77 (19)
C21—C2—H2108.5C7—C6—H6119.1
C3—C2—H2108.5C5A—C6—H6119.1
C4—C3—C2114.04 (16)C8—C7—C6119.57 (19)
C4—C3—H3A108.7C8—C7—H7120.2
C2—C3—H3A108.7C6—C7—H7120.2
C4—C3—H3B108.7C7—C8—C9119.62 (19)
C2—C3—H3B108.7C7—C8—H8120.2
H3A—C3—H3B107.6C9—C8—H8120.2
O4—C4—C3104.53 (15)C8—C9—C9A120.77 (19)
O4—C4—C5109.15 (15)C8—C9—H9119.6
C3—C4—C5115.79 (16)C9A—C9—H9119.6
O4—C4—H4109.1C9—C9A—C5A120.41 (17)
C3—C4—H4109.1C9—C9A—N1120.50 (18)
C5—C4—H4109.1C5A—C9A—N1118.99 (17)
C4—O4—H41108.7O21—C21—O22124.37 (18)
C5A—C5—C4116.98 (16)O21—C21—C2122.89 (18)
C5A—C5—H5A108.1O22—C21—C2112.71 (17)
C4—C5—H5A108.1C21—O22—H22107.6
C9A—N1—C2—C21147.73 (16)C7—C8—C9—C9A1.0 (3)
C9A—N1—C2—C388.84 (19)C8—C9—C9A—C5A0.5 (3)
N1—C2—C3—C465.2 (2)C8—C9—C9A—N1176.90 (18)
C21—C2—C3—C4174.35 (16)C6—C5A—C9A—C92.0 (3)
C2—C3—C4—O4178.50 (16)C5—C5A—C9A—C9175.05 (18)
C2—C3—C4—C558.4 (2)C6—C5A—C9A—N1178.51 (17)
O4—C4—C5—C5A170.24 (16)C5—C5A—C9A—N11.4 (3)
C3—C4—C5—C5A72.2 (2)C2—N1—C9A—C9116.1 (2)
C4—C5—C5A—C6121.5 (2)C2—N1—C9A—C5A67.4 (2)
C4—C5—C5A—C9A61.5 (3)N1—C2—C21—O215.3 (2)
C9A—C5A—C6—C72.2 (3)C3—C2—C21—O21128.6 (2)
C5—C5A—C6—C7174.87 (19)N1—C2—C21—O22176.63 (15)
C5A—C6—C7—C80.8 (3)C3—C2—C21—O2253.3 (2)
C6—C7—C8—C90.8 (3)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1···O210.862.122.644 (2)119
O22—H22···O4i0.921.752.665 (2)172
O4—H41···N1ii0.822.052.859 (2)167
Symmetry codes: (i) x, y+1/2, z+1/2; (ii) x, y+1/2, z+1/2.
(IV) (2RS,5SR)-8-(trifluoromethoxy)-5,6-dihydro-1H-2,5-methanobenz[e][1,4]oxazocin-3(2H)-one top
Crystal data top
C12H10F3NO3F(000) = 560
Mr = 273.21Dx = 1.620 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2569 reflections
a = 15.0601 (8) Åθ = 2.7–27.5°
b = 9.2204 (5) ŵ = 0.15 mm1
c = 8.072 (4) ÅT = 120 K
β = 91.668 (10)°Block, colourless
V = 1120.4 (6) Å30.28 × 0.21 × 0.19 mm
Z = 4
Data collection top
Bruker–Nonius KappaCCD
diffractometer
2567 independent reflections
Radiation source: Bruker–Nonius FR591 rotating anode1854 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.055
Detector resolution: 9.091 pixels mm-1θmax = 27.5°, θmin = 3.5°
ϕ & ω scansh = 1919
Absorption correction: multi-scan
(SADABS; Sheldrick, 2003)
k = 1111
Tmin = 0.788, Tmax = 0.972l = 1010
18683 measured reflections
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.105H-atom parameters constrained
S = 1.07 w = 1/[σ2(Fo2) + (0.0431P)2 + 0.5504P]
where P = (Fo2 + 2Fc2)/3
2567 reflections(Δ/σ)max = 0.001
172 parametersΔρmax = 0.21 e Å3
0 restraintsΔρmin = 0.31 e Å3
Crystal data top
C12H10F3NO3V = 1120.4 (6) Å3
Mr = 273.21Z = 4
Monoclinic, P21/cMo Kα radiation
a = 15.0601 (8) ŵ = 0.15 mm1
b = 9.2204 (5) ÅT = 120 K
c = 8.072 (4) Å0.28 × 0.21 × 0.19 mm
β = 91.668 (10)°
Data collection top
Bruker–Nonius KappaCCD
diffractometer
2567 independent reflections
Absorption correction: multi-scan
(SADABS; Sheldrick, 2003)
1854 reflections with I > 2σ(I)
Tmin = 0.788, Tmax = 0.972Rint = 0.055
18683 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0430 restraints
wR(F2) = 0.105H-atom parameters constrained
S = 1.07Δρmax = 0.21 e Å3
2567 reflectionsΔρmin = 0.31 e Å3
172 parameters
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
N10.61135 (10)0.59820 (16)0.61634 (18)0.0218 (3)
H10.56810.62790.53370.026*
C20.57188 (12)0.50477 (19)0.7412 (2)0.0219 (4)
H20.50800.53080.75430.026*
C30.58000 (12)0.3450 (2)0.6930 (2)0.0222 (4)
O310.53420 (8)0.27667 (14)0.59480 (16)0.0271 (3)
O40.65026 (8)0.28484 (14)0.77298 (15)0.0242 (3)
C50.69319 (12)0.3941 (2)0.8832 (2)0.0233 (4)
H50.71070.34840.99170.028*
C60.77490 (12)0.4539 (2)0.8014 (2)0.0245 (4)
H6A0.82160.37840.80870.029*
H6B0.79650.53740.86830.029*
C6A0.76701 (12)0.5033 (2)0.6213 (2)0.0208 (4)
C70.84494 (12)0.4894 (2)0.5318 (2)0.0216 (4)
H70.89550.44450.58290.026*
C80.85009 (12)0.53906 (19)0.3717 (2)0.0219 (4)
C90.77828 (12)0.6040 (2)0.2918 (2)0.0235 (4)
H90.78260.64000.18200.028*
C100.70001 (12)0.61538 (19)0.3759 (2)0.0219 (4)
H100.64950.65640.32050.026*
C10A0.69255 (12)0.56800 (18)0.5413 (2)0.0201 (4)
C250.62034 (12)0.5060 (2)0.9089 (2)0.0234 (4)
H25A0.58070.47660.99860.028*
H25B0.64560.60290.93460.028*
O810.93234 (8)0.53034 (14)0.28898 (15)0.0254 (3)
C810.95115 (12)0.4006 (2)0.2242 (2)0.0258 (4)
F810.96324 (8)0.29714 (13)0.33838 (14)0.0348 (3)
F821.02571 (7)0.41217 (13)0.14159 (14)0.0351 (3)
F830.88729 (8)0.35243 (14)0.11937 (14)0.0361 (3)
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
N10.0216 (8)0.0206 (8)0.0233 (7)0.0026 (6)0.0026 (6)0.0023 (6)
C20.0210 (9)0.0196 (9)0.0255 (9)0.0005 (7)0.0056 (7)0.0005 (7)
C30.0205 (9)0.0220 (9)0.0246 (9)0.0004 (7)0.0070 (7)0.0019 (8)
O310.0256 (7)0.0224 (7)0.0333 (7)0.0016 (5)0.0018 (6)0.0026 (6)
O40.0258 (7)0.0200 (6)0.0270 (7)0.0039 (5)0.0026 (5)0.0001 (5)
C50.0270 (10)0.0232 (9)0.0199 (8)0.0007 (8)0.0015 (7)0.0003 (7)
C60.0223 (9)0.0327 (10)0.0187 (8)0.0025 (8)0.0014 (7)0.0033 (8)
C6A0.0230 (9)0.0200 (9)0.0195 (9)0.0014 (7)0.0017 (7)0.0003 (7)
C70.0220 (9)0.0212 (9)0.0214 (9)0.0011 (7)0.0008 (7)0.0005 (7)
C80.0223 (9)0.0215 (9)0.0222 (9)0.0040 (7)0.0065 (7)0.0026 (7)
C90.0319 (10)0.0200 (9)0.0187 (8)0.0018 (8)0.0022 (8)0.0009 (7)
C100.0250 (9)0.0188 (9)0.0217 (9)0.0007 (7)0.0018 (7)0.0010 (7)
C10A0.0223 (9)0.0155 (8)0.0224 (9)0.0013 (7)0.0019 (7)0.0031 (7)
C250.0259 (9)0.0213 (9)0.0234 (9)0.0007 (7)0.0064 (7)0.0002 (7)
O810.0241 (7)0.0261 (7)0.0266 (7)0.0042 (5)0.0091 (5)0.0010 (6)
C810.0243 (10)0.0318 (11)0.0215 (9)0.0023 (8)0.0041 (8)0.0005 (8)
F810.0403 (7)0.0338 (7)0.0308 (6)0.0084 (5)0.0097 (5)0.0075 (5)
F820.0282 (6)0.0467 (8)0.0312 (6)0.0012 (5)0.0138 (5)0.0013 (5)
F830.0319 (6)0.0459 (7)0.0304 (6)0.0013 (5)0.0010 (5)0.0135 (6)
Geometric parameters (Å, º) top
N1—C10A1.408 (2)C6A—C10A1.410 (2)
N1—C21.465 (2)C7—C81.375 (3)
N1—H10.9581C7—H70.9500
C2—C251.520 (3)C8—C91.380 (3)
C2—C31.530 (2)C8—O811.427 (2)
C2—H21.0000C9—C101.381 (3)
C3—O311.212 (2)C9—H90.9500
C3—O41.343 (2)C10—C10A1.413 (3)
O4—C51.481 (2)C10—H100.9500
C5—C61.517 (3)C25—H25A0.9900
C5—C251.525 (3)C25—H25B0.9900
C5—H51.0000O81—C811.340 (2)
C6—C6A1.525 (2)C81—F821.327 (2)
C6—H6A0.9900C81—F811.335 (2)
C6—H6B0.9900C81—F831.338 (2)
C6A—C71.402 (2)
C10A—N1—C2123.67 (14)C8—C7—C6A121.66 (17)
C10A—N1—H1109.8C8—C7—H7119.2
C2—N1—H1111.5C6A—C7—H7119.2
N1—C2—C25114.48 (15)C7—C8—C9121.26 (17)
N1—C2—C3110.77 (14)C7—C8—O81119.63 (16)
C25—C2—C3101.19 (14)C9—C8—O81119.03 (15)
N1—C2—H2110.0C8—C9—C10118.16 (16)
C25—C2—H2110.0C8—C9—H9120.9
C3—C2—H2110.0C10—C9—H9120.9
O31—C3—O4121.68 (17)C9—C10—C10A122.23 (16)
O31—C3—C2128.21 (17)C9—C10—H10118.9
O4—C3—C2110.08 (15)C10A—C10—H10118.9
C3—O4—C5109.39 (14)N1—C10A—C6A125.15 (16)
O4—C5—C6109.33 (14)N1—C10A—C10116.06 (16)
O4—C5—C25103.83 (14)C6A—C10A—C10118.68 (16)
C6—C5—C25114.17 (16)C2—C25—C5101.68 (14)
O4—C5—H5109.8C2—C25—H25A111.4
C6—C5—H5109.8C5—C25—H25A111.4
C25—C5—H5109.8C2—C25—H25B111.4
C5—C6—C6A118.80 (15)C5—C25—H25B111.4
C5—C6—H6A107.6H25A—C25—H25B109.3
C6A—C6—H6A107.6C81—O81—C8115.44 (14)
C5—C6—H6B107.6F82—C81—F81107.71 (15)
C6A—C6—H6B107.6F82—C81—F83108.21 (15)
H6A—C6—H6B107.0F81—C81—F83106.30 (16)
C7—C6A—C10A117.96 (15)F82—C81—O81108.41 (15)
C7—C6A—C6114.90 (15)F81—C81—O81113.23 (15)
C10A—C6A—C6127.02 (16)F83—C81—O81112.76 (16)
C10A—N1—C2—C2571.1 (2)O81—C8—C9—C10178.06 (15)
C10A—N1—C2—C342.5 (2)C8—C9—C10—C10A2.5 (3)
N1—C2—C3—O3179.9 (2)C2—N1—C10A—C6A36.1 (3)
C25—C2—C3—O31158.32 (18)C2—N1—C10A—C10147.94 (16)
N1—C2—C3—O497.98 (17)C7—C6A—C10A—N1175.86 (16)
C25—C2—C3—O423.81 (18)C6—C6A—C10A—N10.1 (3)
O31—C3—O4—C5179.70 (16)C7—C6A—C10A—C100.0 (3)
C2—C3—O4—C51.67 (18)C6—C6A—C10A—C10175.80 (17)
C3—O4—C5—C6100.92 (16)C9—C10—C10A—N1174.42 (16)
C3—O4—C5—C2521.31 (18)C9—C10—C10A—C6A1.8 (3)
O4—C5—C6—C6A48.3 (2)N1—C2—C25—C584.37 (17)
C25—C5—C6—C6A67.5 (2)C3—C2—C25—C534.79 (17)
C5—C6—C6A—C7150.27 (17)O4—C5—C25—C234.96 (17)
C5—C6—C6A—C10A33.8 (3)C6—C5—C25—C284.00 (17)
C10A—C6A—C7—C81.1 (3)C7—C8—O81—C8180.9 (2)
C6—C6A—C7—C8175.20 (17)C9—C8—O81—C81102.34 (19)
C6A—C7—C8—C90.4 (3)C8—O81—C81—F82175.46 (13)
C6A—C7—C8—O81176.27 (16)C8—O81—C81—F8165.1 (2)
C7—C8—C9—C101.3 (3)C8—O81—C81—F8355.7 (2)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1···O31i0.962.032.970 (2)166
Symmetry code: (i) x+1, y+1, z+1.

Experimental details

(I)(II)(III)(IV)
Crystal data
Chemical formulaC12H13NO3C12H15NO3C11H13NO3C12H10F3NO3
Mr219.23221.25207.22273.21
Crystal system, space groupOrthorhombic, P212121Orthorhombic, P212121Monoclinic, P21/cMonoclinic, P21/c
Temperature (K)120120120120
a, b, c (Å)6.8549 (6), 11.4483 (12), 13.1369 (14)6.2528 (13), 10.758 (3), 15.927 (5)9.4389 (5), 11.9081 (5), 9.2702 (4)15.0601 (8), 9.2204 (5), 8.072 (4)
α, β, γ (°)90, 90, 9090, 90, 9090, 108.275 (3), 9090, 91.668 (10), 90
V3)1030.94 (18)1071.4 (5)989.41 (8)1120.4 (6)
Z4444
Radiation typeMo KαMo KαMo KαMo Kα
µ (mm1)0.100.100.100.15
Crystal size (mm)0.22 × 0.20 × 0.120.25 × 0.16 × 0.120.25 × 0.22 × 0.180.28 × 0.21 × 0.19
Data collection
DiffractometerBruker–Nonius KappaCCD
diffractometer
Bruker–Nonius KappaCCD
diffractometer
Bruker–Nonius KappaCCD
diffractometer
Bruker–Nonius KappaCCD
diffractometer
Absorption correctionMulti-scan
(SADABS; Sheldrick, 2003)
Multi-scan
(SADABS; Sheldrick, 2003)
Multi-scan
(SADABS; Sheldrick, 2003)
Multi-scan
(SADABS; Sheldrick, 2003)
Tmin, Tmax0.835, 0.9880.616, 0.9880.724, 0.9820.788, 0.972
No. of measured, independent and
observed [I > 2σ(I)] reflections
12257, 1375, 1089 12235, 1424, 1117 16576, 2260, 1411 18683, 2567, 1854
Rint0.0770.0900.0750.055
(sin θ/λ)max1)0.6500.6500.6500.650
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.043, 0.083, 1.15 0.069, 0.187, 1.19 0.048, 0.119, 1.08 0.043, 0.105, 1.07
No. of reflections1375142422602567
No. of parameters146146136172
H-atom treatmentH-atom parameters constrainedH-atom parameters constrainedH-atom parameters constrainedH-atom parameters constrained
Δρmax, Δρmin (e Å3)0.20, 0.210.58, 0.340.25, 0.290.21, 0.31

Computer programs: COLLECT (Hooft, 1998), DIRAX/LSQ (Duisenberg et al., 2000), EVALCCD (Duisenberg et al., 2003), SIR2004 (Burla et al., 2005), SHELXL97(Sheldrick, 2008) and PLATON (Spek, 2009), SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).

Selected bond lengths (Å) for compounds (I)–(III) top
Parameter(I)(II)(III)
C21—O211.203 (3)1.211 (6)1.211 (2)
C21—O221.346 (3)1.318 (6)1.329 (2)
The correpsonding values for compound (IV) are C3—O31 = 1.212 (2) Å and C3—O4 = 1.343 (2) Å.
Hydrogen bonds and short intramolecular contacts (Å, °) for compounds (I)–(IV) top
CompoundD—H···AD—HH···AD···AD—H···A
(I)C7—H7···Cg1i0.952.483.409 (3)165
(II)O4—N41···O21ii0.982.313.178 (6)147
O4—N41···N1ii0.982.483.334 (6)145
C9—C9···Cg1iii0.952.553.350 (5)142
(III)N1—H1···O210.862.122.644 (2)119
O22—H22···O4iv0.921.752.665 (2)172
O4—H41···N1v0.822.052.859 (2)167
(IV)N1—H1···O31vi0.962.032.970 (2)166
Cg1 represents the centroid of the C5A/C6–C9/C9A ring. Symmetry codes: (i) x-1/2, -y+1/2, -z+1; (ii) -x+1, y-1/2, -z+1/2; (iii) x+1/2, -y+3/2, -z; (iv) -x, y+1/2, -z+1/2; (v) x, -y+1/2, z+1/2; (vi) -x+1, -y+1, -z+1.
 

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