addenda and errata\(\def\hfill{\hskip 5em}\def\hfil{\hskip 3em}\def\eqno#1{\hfil {#1}}\)

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ISSN: 1600-5775

A comparison of absorption and phase contrast for X-ray imaging of biological cells. Erratum

aDiamond Light Source Ltd, Harwell Science and Innovation Campus, Didcot OX11 0DE, UK
*Correspondence e-mail: colin.nave@diamond.ac.uk

Edited by M. Yamamoto, RIKEN SPring-8 Center, Japan (Received 24 January 2019; accepted 20 February 2019; online 27 February 2019)

An error in the calculation for X-ray absorption imaging has been identified in the paper by Nave (2018[Nave, C. (2018). J. Synchrotron Rad. 25, 1490-1504.]) [J. Synchrotron Rad. 25, 1490–1504]. The required fluence and dose in the paper are a factor of ten too low for this mode of imaging.

The author regrets that an error in the calculations of the required fluence (and hence dose) for imaging by absorption was made in the paper by Nave (2018[Nave, C. (2018). J. Synchrotron Rad. 25, 1490-1504.]). This occurred because an incorrect number was applied when converting from the required number of photons incident on a pixel to a fluence (photons µm−2). The fluences and doses shown in Figs. 3[link] and 6[link] should all be increased by a factor of ten. As the error only occurred in the calculation for imaging by absorption, the dose ratios in Fig. 7[link] should be decreased by a factor of ten. These ratios are discussed in the text where the following corrections should be made:

[Figure 3]
Figure 3
Fluence and dose for protein in water with absorption contrast. Rose criteria 5 with the dose distributed over a model cell (70% water). The fluence and dose at 2% efficiency follows the zone plate efficiency adopted by Huang et al. (2009[Huang, X., Miao, H., Steinbrener, J., Nelson, J., Shapiro, D., Stewart, A., Turner, J. & Jacobsen, C. (2009). Opt. Express, 17, 13541-13553.]).
[Figure 6]
Figure 6
(a) Fluence requirements (absorption contrast, 10 nm resolution) for the four cellular components following the calculations for protein illustrated in Fig. 3, 100% efficiency. (b) Dose requirements following the calculations in Fig. 3, 100% efficiency.
[Figure 7]
Figure 7
Comparison of the dose for phase contrast with absorption contrast at 520 eV. Obtained by dividing the values in Fig. 5(b) with the value at 520 eV in Fig. 6(b).

Section 5.4: `For some components, much higher doses (e.g. a factor of 10–45 times more) are required for phase contrast imaging at the higher energies.'

Section 6, fourth paragraph: `The dose requirements for phase contrast at 4000 eV are between a factor of 2.2 (starch granule) and 45 (lipid droplet) higher than absorption contrast at 520 eV (Fig. 7[link]). Mitochondrial membranes in absorption contrast at 522 eV would require a dose of 5.2 × 108 Gy for 10 nm resolution whereas a dose of 1.5 × 1010 Gy would be required in phase contrast at 2000 eV.'

The benefits of operating in the water window for thin specimens are still present although to a lesser extent than given in the paper. The error was identified when comparing the calculations with those of Schneider (1998[Schneider, G. (1998). Ultramicroscopy, 75, 85-104.]) in which optimized phase contrast (exploiting amplitude and phase contrast) in the water window gave the lowest required dose for thin specimens. The corrections given above are consistent with this conclusion.

References

First citationHuang, X., Miao, H., Steinbrener, J., Nelson, J., Shapiro, D., Stewart, A., Turner, J. & Jacobsen, C. (2009). Opt. Express, 17, 13541–13553.  Web of Science CrossRef PubMed Google Scholar
First citationNave, C. (2018). J. Synchrotron Rad. 25, 1490–1504.  CrossRef CAS IUCr Journals Google Scholar
First citationSchneider, G. (1998). Ultramicroscopy, 75, 85–104.  Web of Science CrossRef CAS PubMed Google Scholar

This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.

Journal logoJOURNAL OF
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RADIATION
ISSN: 1600-5775
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