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Figure 2
MuscleX-DI in `Single Image' mode. Panel A shows the interface used to select single image or folder mode. Users start most analyses in the single image mode by clicking `Select an Image…'. This will load the images into the interface shown in Panel B. Panel C shows display options to scale intensities displayed on the diffraction pattern. The `Settings' in panel D can be used to update integration, blank image and masks, inner and outer radial distance used for analyses, regions of interest in this range, or the option to select specific rings across the dataset. After selecting the appropriate settings, users can process the entire folder with sequentially numbered diffraction patterns from a scan to apply the same settings for the dataset.

Journal logoJOURNAL OF
SYNCHROTRON
RADIATION
ISSN: 1600-5775
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