supplementary materials
5-Methyl-2-phenyl-2H-pyrazol-3-ol
The title compound, C10H10N2O, known as Edaravone (MCI-186), was crystallized from methanol. The two independent molecules in the asymmetric unit are linked through an O-H
O hydrogen bond. One molecule adopts a ketone form, while the other adopts an enol form. In the crystal structure, molecules are linked through intermolecular N-H
O hydrogen bonds, forming chains running along the b axis.
The crystal of the compound was recrystallized by edaravone in methanol.
H2A and H2B were located in a difference Fourier map and refined isotropically,
with N–H and O–H distances restrained to 0.90 (1) and 0.85 (1) Å, and with
Uiso(H) set to 0.08 Å2. Other H atoms were constrained to
idealized geometries, with C–H = 0.93–0.96 Å, and with Uiso(H)
set to 1.2Ueq(C) and 1.5Ueq(methyl C).
Data collection: SMART (Bruker, 2002); cell refinement: SAINT (Bruker, 2002); data reduction: SAINT (Bruker, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).
5-Methyl-2-phenyl-2
H-pyrazol-3-ol
top
Crystal data top
| C10H10N2O | F(000) = 736 |
| Mr = 174.20 | Dx = 1.271 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2ybc | Cell parameters from 3931 reflections |
| a = 10.336 (2) Å | θ = 2.3–29.0° |
| b = 11.154 (2) Å | µ = 0.09 mm−1 |
| c = 15.863 (3) Å | T = 298 K |
| β = 95.157 (3)° | Block, colorless |
| V = 1821.4 (6) Å3 | 0.23 × 0.23 × 0.20 mm |
| Z = 8 | |
Data collection top
Bruker SMART CCD area-detector diffractometer | 3923 independent reflections |
| Radiation source: fine-focus sealed tube | 2894 reflections with I > 2σ(I) |
| graphite | Rint = 0.025 |
| ω scan | θmax = 27.0°, θmin = 2.2° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −13→11 |
| Tmin = 0.981, Tmax = 0.983 | k = −13→14 |
| 10551 measured reflections | l = −20→18 |
Refinement top
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| R[F2 > 2σ(F2)] = 0.040 | H atoms treated by a mixture of independent and constrained refinement |
| wR(F2) = 0.106 | w = 1/[σ2(Fo2) + (0.0428P)2 + 0.3053P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.04 | (Δ/σ)max < 0.001 |
| 3923 reflections | Δρmax = 0.17 e Å−3 |
| 243 parameters | Δρmin = −0.14 e Å−3 |
| 2 restraints | Extinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0087 (12) |
Crystal data top
| C10H10N2O | V = 1821.4 (6) Å3 |
| Mr = 174.20 | Z = 8 |
| Monoclinic, P21/c | Mo Kα radiation |
| a = 10.336 (2) Å | µ = 0.09 mm−1 |
| b = 11.154 (2) Å | T = 298 K |
| c = 15.863 (3) Å | 0.23 × 0.23 × 0.20 mm |
| β = 95.157 (3)° | |
Data collection top
Bruker SMART CCD area-detector diffractometer | 3923 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 2894 reflections with I > 2σ(I) |
| Tmin = 0.981, Tmax = 0.983 | Rint = 0.025 |
| 10551 measured reflections | θmax = 27.0° |
Refinement top
| R[F2 > 2σ(F2)] = 0.040 | H atoms treated by a mixture of independent and constrained refinement |
| wR(F2) = 0.106 | Δρmax = 0.17 e Å−3 |
| S = 1.04 | Δρmin = −0.14 e Å−3 |
| 3923 reflections | Absolute structure: ? |
| 243 parameters | Flack parameter: ? |
| 2 restraints | Rogers parameter: ? |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top| | x | y | z | Uiso*/Ueq | |
| O1 | 0.76081 (11) | 0.23408 (9) | 0.09473 (8) | 0.0652 (3) | |
| O2 | 0.63865 (11) | 0.42520 (9) | 0.07652 (7) | 0.0577 (3) | |
| N1 | 0.80235 (11) | 0.03414 (9) | 0.07061 (8) | 0.0469 (3) | |
| N2 | 0.76341 (13) | −0.04917 (10) | 0.00921 (8) | 0.0516 (3) | |
| N3 | 0.69321 (11) | 0.62596 (9) | 0.06745 (7) | 0.0418 (3) | |
| N4 | 0.76998 (12) | 0.70070 (10) | 0.02382 (8) | 0.0490 (3) | |
| C1 | 0.91015 (13) | 0.01075 (12) | 0.12978 (9) | 0.0457 (3) | |
| C2 | 0.92942 (16) | 0.07840 (15) | 0.20276 (10) | 0.0603 (4) | |
| H2 | 0.8722 | 0.1399 | 0.2131 | 0.072* | |
| C3 | 1.03427 (19) | 0.05375 (19) | 0.26009 (12) | 0.0768 (5) | |
| H3 | 1.0481 | 0.0997 | 0.3090 | 0.092* | |
| C4 | 1.1181 (2) | −0.0372 (2) | 0.24600 (13) | 0.0814 (6) | |
| H4 | 1.1881 | −0.0536 | 0.2853 | 0.098* | |
| C5 | 1.09872 (17) | −0.10395 (18) | 0.17403 (14) | 0.0755 (5) | |
| H5 | 1.1557 | −0.1661 | 0.1647 | 0.091* | |
| C6 | 0.99550 (15) | −0.08041 (15) | 0.11475 (11) | 0.0597 (4) | |
| H6 | 0.9837 | −0.1255 | 0.0653 | 0.072* | |
| C7 | 0.73814 (14) | 0.14046 (12) | 0.05144 (10) | 0.0486 (4) | |
| C8 | 0.65398 (16) | 0.11675 (14) | −0.02083 (10) | 0.0566 (4) | |
| H8 | 0.5970 | 0.1713 | −0.0486 | 0.068* | |
| C9 | 0.66976 (15) | 0.00076 (14) | −0.04331 (10) | 0.0536 (4) | |
| C10 | 0.6047 (2) | −0.07170 (17) | −0.11335 (11) | 0.0760 (5) | |
| H10A | 0.6586 | −0.0744 | −0.1596 | 0.114* | |
| H10B | 0.5227 | −0.0359 | −0.1321 | 0.114* | |
| H10C | 0.5908 | −0.1517 | −0.0937 | 0.114* | |
| C11 | 0.61818 (14) | 0.67394 (12) | 0.12999 (8) | 0.0441 (3) | |
| C12 | 0.49765 (15) | 0.62664 (14) | 0.14196 (10) | 0.0545 (4) | |
| H12 | 0.4655 | 0.5611 | 0.1104 | 0.065* | |
| C13 | 0.42556 (18) | 0.67832 (19) | 0.20167 (12) | 0.0755 (6) | |
| H13 | 0.3450 | 0.6462 | 0.2108 | 0.091* | |
| C14 | 0.4708 (2) | 0.7760 (2) | 0.24752 (12) | 0.0860 (7) | |
| H14 | 0.4205 | 0.8110 | 0.2866 | 0.103* | |
| C15 | 0.5904 (2) | 0.82150 (17) | 0.23553 (11) | 0.0799 (6) | |
| H15 | 0.6213 | 0.8876 | 0.2669 | 0.096* | |
| C16 | 0.66614 (18) | 0.77067 (13) | 0.17737 (10) | 0.0584 (4) | |
| H16 | 0.7482 | 0.8012 | 0.1703 | 0.070* | |
| C17 | 0.70530 (13) | 0.51085 (11) | 0.04194 (9) | 0.0430 (3) | |
| C18 | 0.79096 (15) | 0.51055 (13) | −0.01882 (10) | 0.0526 (4) | |
| H18 | 0.8190 | 0.4445 | −0.0479 | 0.063* | |
| C19 | 0.82756 (15) | 0.62954 (13) | −0.02813 (10) | 0.0510 (4) | |
| C20 | 0.91583 (19) | 0.68181 (17) | −0.08846 (13) | 0.0794 (6) | |
| H20A | 0.9060 | 0.7674 | −0.0900 | 0.119* | |
| H20B | 0.8938 | 0.6496 | −0.1440 | 0.119* | |
| H20C | 1.0042 | 0.6619 | −0.0700 | 0.119* | |
| H2A | 0.7692 (17) | −0.1287 (9) | 0.0208 (11) | 0.080* | |
| H2B | 0.6823 (16) | 0.3585 (12) | 0.0773 (12) | 0.080* | |
Atomic displacement parameters (Å2) top| | U11 | U22 | U33 | U12 | U13 | U23 |
| O1 | 0.0757 (7) | 0.0322 (5) | 0.0864 (8) | 0.0043 (5) | −0.0001 (6) | −0.0043 (5) |
| O2 | 0.0673 (7) | 0.0311 (5) | 0.0772 (7) | 0.0007 (5) | 0.0205 (6) | 0.0059 (5) |
| N1 | 0.0531 (7) | 0.0283 (6) | 0.0577 (7) | 0.0011 (5) | −0.0031 (6) | 0.0011 (5) |
| N2 | 0.0640 (8) | 0.0310 (6) | 0.0581 (7) | 0.0018 (5) | −0.0030 (6) | 0.0012 (5) |
| N3 | 0.0493 (6) | 0.0298 (6) | 0.0476 (6) | 0.0024 (5) | 0.0114 (5) | 0.0017 (5) |
| N4 | 0.0588 (8) | 0.0324 (6) | 0.0582 (7) | −0.0021 (5) | 0.0185 (6) | 0.0015 (5) |
| C1 | 0.0456 (8) | 0.0362 (7) | 0.0551 (8) | −0.0040 (6) | 0.0031 (6) | 0.0098 (6) |
| C2 | 0.0646 (10) | 0.0555 (10) | 0.0603 (10) | −0.0023 (8) | 0.0035 (8) | 0.0003 (8) |
| C3 | 0.0793 (13) | 0.0876 (14) | 0.0607 (11) | −0.0113 (11) | −0.0084 (9) | 0.0024 (10) |
| C4 | 0.0653 (12) | 0.1020 (16) | 0.0736 (12) | −0.0004 (11) | −0.0122 (10) | 0.0206 (12) |
| C5 | 0.0569 (10) | 0.0769 (12) | 0.0919 (14) | 0.0161 (9) | 0.0016 (10) | 0.0187 (11) |
| C6 | 0.0567 (9) | 0.0531 (9) | 0.0687 (10) | 0.0082 (7) | 0.0024 (8) | 0.0050 (8) |
| C7 | 0.0513 (8) | 0.0310 (7) | 0.0640 (9) | 0.0023 (6) | 0.0082 (7) | 0.0075 (7) |
| C8 | 0.0597 (9) | 0.0453 (9) | 0.0635 (10) | 0.0101 (7) | −0.0019 (8) | 0.0127 (7) |
| C9 | 0.0599 (9) | 0.0477 (9) | 0.0523 (8) | 0.0013 (7) | −0.0006 (7) | 0.0069 (7) |
| C10 | 0.0886 (13) | 0.0739 (12) | 0.0622 (10) | −0.0045 (10) | −0.0120 (9) | −0.0032 (9) |
| C11 | 0.0544 (8) | 0.0339 (7) | 0.0447 (7) | 0.0122 (6) | 0.0093 (6) | 0.0067 (6) |
| C12 | 0.0524 (9) | 0.0531 (9) | 0.0586 (9) | 0.0130 (7) | 0.0090 (7) | 0.0135 (7) |
| C13 | 0.0686 (11) | 0.0872 (14) | 0.0749 (12) | 0.0326 (10) | 0.0304 (9) | 0.0286 (11) |
| C14 | 0.1171 (18) | 0.0853 (15) | 0.0612 (11) | 0.0533 (13) | 0.0383 (12) | 0.0143 (11) |
| C15 | 0.1298 (18) | 0.0540 (11) | 0.0579 (10) | 0.0258 (11) | 0.0198 (11) | −0.0063 (8) |
| C16 | 0.0812 (11) | 0.0414 (8) | 0.0537 (9) | 0.0066 (8) | 0.0121 (8) | −0.0019 (7) |
| C17 | 0.0495 (8) | 0.0285 (6) | 0.0511 (7) | 0.0027 (6) | 0.0048 (6) | 0.0015 (6) |
| C18 | 0.0622 (9) | 0.0379 (8) | 0.0597 (9) | 0.0065 (7) | 0.0166 (7) | −0.0068 (7) |
| C19 | 0.0538 (8) | 0.0432 (8) | 0.0580 (9) | 0.0022 (6) | 0.0163 (7) | −0.0002 (7) |
| C20 | 0.0868 (13) | 0.0683 (12) | 0.0901 (13) | −0.0032 (10) | 0.0467 (11) | 0.0008 (10) |
Geometric parameters (Å, °) top
| O1—C7 | 1.260 (2) | C8—C9 | 1.356 (2) |
| O2—C17 | 1.325 (2) | C8—H8 | 0.9300 |
| O2—H2B | 0.870 (9) | C9—C10 | 1.485 (2) |
| N1—C7 | 1.379 (2) | C10—H10A | 0.9600 |
| N1—N2 | 1.380 (2) | C10—H10B | 0.9600 |
| N1—C1 | 1.415 (2) | C10—H10C | 0.9600 |
| N2—C9 | 1.340 (2) | C11—C16 | 1.381 (2) |
| N2—H2A | 0.907 (9) | C11—C12 | 1.382 (2) |
| N3—C17 | 1.355 (2) | C12—C13 | 1.383 (2) |
| N3—N4 | 1.379 (2) | C12—H12 | 0.9300 |
| N3—C11 | 1.418 (2) | C13—C14 | 1.369 (3) |
| N4—C19 | 1.323 (2) | C13—H13 | 0.9300 |
| C1—C6 | 1.381 (2) | C14—C15 | 1.365 (3) |
| C1—C2 | 1.381 (2) | C14—H14 | 0.9300 |
| C2—C3 | 1.378 (2) | C15—C16 | 1.384 (2) |
| C2—H2 | 0.9300 | C15—H15 | 0.9300 |
| C3—C4 | 1.366 (3) | C16—H16 | 0.9300 |
| C3—H3 | 0.9300 | C17—C18 | 1.366 (2) |
| C4—C5 | 1.362 (3) | C18—C19 | 1.392 (2) |
| C4—H4 | 0.9300 | C18—H18 | 0.9300 |
| C5—C6 | 1.383 (2) | C19—C20 | 1.498 (2) |
| C5—H5 | 0.9300 | C20—H20A | 0.9600 |
| C6—H6 | 0.9300 | C20—H20B | 0.9600 |
| C7—C8 | 1.400 (2) | C20—H20C | 0.9600 |
| | | |
| C17—O2—H2B | 109.5 (13) | C9—C10—H10B | 109.5 |
| C7—N1—N2 | 108.62 (11) | H10A—C10—H10B | 109.5 |
| C7—N1—C1 | 129.74 (12) | C9—C10—H10C | 109.5 |
| N2—N1—C1 | 120.42 (11) | H10A—C10—H10C | 109.5 |
| C9—N2—N1 | 107.91 (11) | H10B—C10—H10C | 109.5 |
| C9—N2—H2A | 124.3 (11) | C16—C11—C12 | 120.50 (14) |
| N1—N2—H2A | 120.4 (12) | C16—C11—N3 | 118.91 (13) |
| C17—N3—N4 | 110.49 (11) | C12—C11—N3 | 120.57 (13) |
| C17—N3—C11 | 129.60 (11) | C11—C12—C13 | 118.88 (17) |
| N4—N3—C11 | 119.90 (10) | C11—C12—H12 | 120.6 |
| C19—N4—N3 | 105.14 (11) | C13—C12—H12 | 120.6 |
| C6—C1—C2 | 120.05 (14) | C14—C13—C12 | 121.09 (19) |
| C6—C1—N1 | 119.90 (13) | C14—C13—H13 | 119.5 |
| C2—C1—N1 | 120.05 (13) | C12—C13—H13 | 119.5 |
| C3—C2—C1 | 119.32 (17) | C15—C14—C13 | 119.52 (17) |
| C3—C2—H2 | 120.3 | C15—C14—H14 | 120.2 |
| C1—C2—H2 | 120.3 | C13—C14—H14 | 120.2 |
| C4—C3—C2 | 120.86 (18) | C14—C15—C16 | 120.93 (19) |
| C4—C3—H3 | 119.6 | C14—C15—H15 | 119.5 |
| C2—C3—H3 | 119.6 | C16—C15—H15 | 119.5 |
| C5—C4—C3 | 119.69 (17) | C11—C16—C15 | 119.06 (18) |
| C5—C4—H4 | 120.2 | C11—C16—H16 | 120.5 |
| C3—C4—H4 | 120.2 | C15—C16—H16 | 120.5 |
| C4—C5—C6 | 120.84 (18) | O2—C17—N3 | 119.60 (12) |
| C4—C5—H5 | 119.6 | O2—C17—C18 | 133.19 (13) |
| C6—C5—H5 | 119.6 | N3—C17—C18 | 107.21 (12) |
| C1—C6—C5 | 119.23 (17) | C17—C18—C19 | 105.80 (12) |
| C1—C6—H6 | 120.4 | C17—C18—H18 | 127.1 |
| C5—C6—H6 | 120.4 | C19—C18—H18 | 127.1 |
| O1—C7—N1 | 122.01 (13) | N4—C19—C18 | 111.36 (13) |
| O1—C7—C8 | 132.37 (13) | N4—C19—C20 | 119.87 (13) |
| N1—C7—C8 | 105.62 (12) | C18—C19—C20 | 128.74 (14) |
| C9—C8—C7 | 108.35 (13) | C19—C20—H20A | 109.5 |
| C9—C8—H8 | 125.8 | C19—C20—H20B | 109.5 |
| C7—C8—H8 | 125.8 | H20A—C20—H20B | 109.5 |
| N2—C9—C8 | 109.29 (14) | C19—C20—H20C | 109.5 |
| N2—C9—C10 | 119.47 (14) | H20A—C20—H20C | 109.5 |
| C8—C9—C10 | 131.23 (15) | H20B—C20—H20C | 109.5 |
| C9—C10—H10A | 109.5 | | |
Hydrogen-bond geometry (Å, °) top
| D—H···A | D—H | H···A | D···A | D—H···A |
| N2—H2A···N4i | 0.91 (1) | 1.90 (1) | 2.7999 (17) | 169.(2) |
| O2—H2B···O1 | 0.87 (1) | 1.62 (1) | 2.4813 (15) | 171.(2) |
| Symmetry codes: (i) x, y−1, z. |
Table 1
Hydrogen-bond geometry (Å, °) top
| D—H···A | D—H | H···A | D···A | D—H···A |
| N2—H2A···N4i | 0.91 (1) | 1.90 (1) | 2.7999 (17) | 169.(2) |
| O2—H2B···O1 | 0.87 (1) | 1.62 (1) | 2.4813 (15) | 171.(2) |
| Symmetry codes: (i) x, y−1, z. |
Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–19.
Bruker (2002). SAINT and SMART. Bruker AXS Inc., Madison, Wisconsin, USA.
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany.
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122.
The Edaravone Acute Infarction Study Group (2003). Cerebrovasc. Dis. 15, 222–229.
Watanabe, T., Yuki, S., Egawa, M. & Nishi, H. (1994). J. Pharmacol. Exp. Ther. 268, 1597–1604.
Edaravone (5-methyl-2-phenyl-2H-pyrazol-3-ol, MCI-186) is a free-radical scavenger that was approved by the Ministry of Health, Labor, and Welfare of Japan in 2001, and is now widely used for the treatment of acute cerebral infarction (Watanabe et al.., 1994; The Edaravone Acute Infarction Study Group, 2003). We report in this paper the crystal structure of the compound, (I).
The compound consists of two independent molecules (Fig. 1), which are linked through an intramolecular O2—H2B···O1 hydrogen bond (Table 1). One molecule adopts a ketone form, while the other adopts an enol form. In the ketone molecule, the dihedral angle between the C1–C6 benzene ring and the N1/N2/C9/C8/C7 ring is 22.9 (2)°. In the enol molecule, the dihedral angle between the C11–C16 benzene ring and the N3/N4/C19/C18/C17 ring is 34.3 (2)°. In the compound, all the bond lengths are within normal ranges (Allen et al., 1987). The bond length of C17—O2 [1.325 (2) Å] is longer than that of C7—O1 [1.260 (2) Å], which is caused by the enol form.
In the crystal structure, molecules are linked through intermolecular N–H···O hydrogen bonds (Table 1), forming chains running along the b axis (Fig. 2).