supplementary materials

3-Hydroxy-1-(4-methoxybenzyl)piperidin-2-one
The title compound, C13H17NO3, adopts a conformation in which the aromatic ring and the mean plane of the piperidine ring are almost perpendicular to each other [dihedral angle = 79.25 (6)°]. The presence of the carbonyl group alters the conformation of the piperidine ring from a chair to a twisted half-chair conformation. In the crystal, pairs of strong O-H
O hydrogen bonds link the molecules into inversion dimers. Weak C-H
O interactions extend the hydrogen-bonding network into three dimensions.
To a solution of lithium hexamethyldisilazide, prepared from
n-butyllithium (1.6 M in hexane, 1.83 ml, 2.93 mmol) and
hexamethyldisilazane (0.63 ml) in THF (10 ml) at -70 °C was added a solution
of 1-(4-methoxybenzyl)piperidin-2-one (322 mg, 1.47 mmol) in THF (20 ml). The
solution was stirred at this temperature for 1 h, after which a solution of
(+)-camphorsulfonyloxaziridine (0.67 g, 2.9 mmol) in THF (20 ml) was added
dropwise. Stirring was maintained for a further 16 h at temperatures kept
between -70 and -60 °C. The reaction was quenched by addition of saturated
aqueous ammonium chloride solution (10 ml) and allowed to warm to ambient
temperature. The organic components were extracted with dichloromethane (4
× 15 ml), the combined organic layers were washed with brine (20 ml),
dried over MgSO4, and concentrated in vacuo. Purification by column
chromatography on silica gel with hexane-ethyl acetate mixtures (9:1 to 1:1
v/v) yielded the title compound, which was recrystallized from
hexane-ethyl acetate to yield the product as irregularly shaped colourless
crystals (261 mg, 75%), m.p. 347–349 K.
All H atoms attached to C atoms were positioned geometrically, and allowed to
ride on their parent atoms, with C—H bond lengths of 0.95 Å (Ar—H), 1.0
(CH), 0.99 Å (CH2) or 0.98 Å (CH3), and isotropic displacement
parameters set to 1.2 (CH and CH2) or 1.5 times (CH3) the Ueq of
the parent atom. The alcohol H atom (H2) was located from the difference map
and refined freely with isotropic displacement parameter set to 1.5 times the
Ueq of the parent atom O2.
Data collection: APEX2 (Bruker, 2005); cell refinement: SAINT-NT (Bruker, 2005); data reduction: SAINT-NT (Bruker, 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012) and SCHAKAL99
(Keller, 1999); software used to prepare material for publication: WinGX (Farrugia, 2012) and PLATON (Spek, 2009).
3-Hydroxy-1-(4-methoxybenzyl)piperidin-2-one
top
Crystal data top
| C13H17NO3 | F(000) = 504 |
| Mr = 235.28 | Dx = 1.297 Mg m−3 |
| Monoclinic, P21/c | Melting point: 347 K |
| Hall symbol: -P 2ybc | Mo Kα radiation, λ = 0.71073 Å |
| a = 12.980 (3) Å | Cell parameters from 958 reflections |
| b = 7.6143 (17) Å | θ = 3.5–28.3° |
| c = 12.189 (3) Å | µ = 0.09 mm−1 |
| β = 90.497 (5)° | T = 173 K |
| V = 1204.6 (5) Å3 | Irregular, colourless |
| Z = 4 | 0.32 × 0.26 × 0.18 mm |
Data collection top
Bruker APEXII CCD diffractometer | 2271 reflections with I > 2σ(I) |
| Radiation source: fine-focus sealed tube | Rint = 0.027 |
| Graphite monochromator | θmax = 28.0°, θmin = 3.1° |
| φ and ω scans | h = −14→17 |
| 8378 measured reflections | k = −10→10 |
| 2895 independent reflections | l = −16→9 |
Refinement top
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.042 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.124 | H atoms treated by a mixture of independent and constrained refinement |
| S = 1.08 | w = 1/[σ2(Fo2) + (0.066P)2 + 0.1896P] where P = (Fo2 + 2Fc2)/3 |
| 2895 reflections | (Δ/σ)max < 0.001 |
| 158 parameters | Δρmax = 0.52 e Å−3 |
| 0 restraints | Δρmin = −0.22 e Å−3 |
| 0 constraints | |
Crystal data top
| C13H17NO3 | V = 1204.6 (5) Å3 |
| Mr = 235.28 | Z = 4 |
| Monoclinic, P21/c | Mo Kα radiation |
| a = 12.980 (3) Å | µ = 0.09 mm−1 |
| b = 7.6143 (17) Å | T = 173 K |
| c = 12.189 (3) Å | 0.32 × 0.26 × 0.18 mm |
| β = 90.497 (5)° | |
Data collection top
Bruker APEXII CCD diffractometer | 2271 reflections with I > 2σ(I) |
| 8378 measured reflections | Rint = 0.027 |
| 2895 independent reflections | θmax = 28.0° |
Refinement top
| R[F2 > 2σ(F2)] = 0.042 | H atoms treated by a mixture of independent and constrained refinement |
| wR(F2) = 0.124 | Δρmax = 0.52 e Å−3 |
| S = 1.08 | Δρmin = −0.22 e Å−3 |
| 2895 reflections | Absolute structure: ? |
| 158 parameters | Flack parameter: ? |
| 0 restraints | Rogers parameter: ? |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top| | x | y | z | Uiso*/Ueq | |
| C2 | 0.11028 (9) | 0.10275 (17) | 0.35921 (10) | 0.0283 (3) | |
| C3 | 0.06871 (9) | −0.07971 (17) | 0.32619 (11) | 0.0304 (3) | |
| H3 | −0.0060 | −0.0662 | 0.3072 | 0.037* | |
| C4 | 0.12221 (11) | −0.15543 (17) | 0.22690 (12) | 0.0353 (3) | |
| H4A | 0.0856 | −0.2621 | 0.2013 | 0.042* | |
| H4B | 0.1939 | −0.1883 | 0.2463 | 0.042* | |
| C5 | 0.12221 (11) | −0.01793 (18) | 0.13695 (11) | 0.0374 (3) | |
| H5A | 0.1507 | −0.0688 | 0.0689 | 0.045* | |
| H5B | 0.0508 | 0.0209 | 0.1214 | 0.045* | |
| C6 | 0.18684 (10) | 0.13727 (17) | 0.17295 (10) | 0.0323 (3) | |
| H6A | 0.2605 | 0.1038 | 0.1716 | 0.039* | |
| H6B | 0.1766 | 0.2349 | 0.1204 | 0.039* | |
| C7 | 0.20555 (10) | 0.36915 (17) | 0.31491 (12) | 0.0334 (3) | |
| H7A | 0.1693 | 0.4153 | 0.3800 | 0.040* | |
| H7B | 0.1951 | 0.4535 | 0.2540 | 0.040* | |
| C8 | 0.31965 (10) | 0.35530 (15) | 0.34078 (11) | 0.0296 (3) | |
| C9 | 0.35322 (10) | 0.27078 (17) | 0.43529 (11) | 0.0343 (3) | |
| H9 | 0.3037 | 0.2227 | 0.4838 | 0.041* | |
| C10 | 0.45748 (11) | 0.25429 (18) | 0.46121 (11) | 0.0349 (3) | |
| H10 | 0.4786 | 0.1967 | 0.5268 | 0.042* | |
| C11 | 0.53038 (10) | 0.32307 (16) | 0.39013 (11) | 0.0321 (3) | |
| C12 | 0.49838 (10) | 0.4107 (2) | 0.29565 (12) | 0.0389 (3) | |
| H12 | 0.5479 | 0.4600 | 0.2477 | 0.047* | |
| C13 | 0.39415 (10) | 0.42600 (19) | 0.27143 (11) | 0.0365 (3) | |
| H13 | 0.3730 | 0.4856 | 0.2066 | 0.044* | |
| C14 | 0.66904 (13) | 0.2242 (2) | 0.50439 (15) | 0.0495 (4) | |
| H14A | 0.6450 | 0.2894 | 0.5686 | 0.074* | |
| H14B | 0.7445 | 0.2192 | 0.5055 | 0.074* | |
| H14C | 0.6411 | 0.1047 | 0.5061 | 0.074* | |
| N1 | 0.16062 (8) | 0.19805 (13) | 0.28388 (8) | 0.0270 (2) | |
| O1 | 0.09468 (8) | 0.15790 (15) | 0.45317 (8) | 0.0444 (3) | |
| O2 | 0.07623 (8) | −0.19755 (14) | 0.41449 (10) | 0.0457 (3) | |
| H2 | 0.0256 (18) | −0.165 (3) | 0.4675 (17) | 0.069* | |
| O3 | 0.63479 (7) | 0.31060 (14) | 0.40678 (9) | 0.0431 (3) | |
Atomic displacement parameters (Å2) top| | U11 | U22 | U33 | U12 | U13 | U23 |
| C2 | 0.0217 (5) | 0.0342 (6) | 0.0289 (6) | −0.0031 (5) | −0.0005 (4) | 0.0000 (5) |
| C3 | 0.0229 (6) | 0.0295 (6) | 0.0389 (7) | −0.0030 (5) | −0.0027 (5) | 0.0049 (5) |
| C4 | 0.0332 (7) | 0.0276 (6) | 0.0451 (8) | 0.0003 (5) | −0.0046 (6) | −0.0036 (5) |
| C5 | 0.0420 (8) | 0.0393 (7) | 0.0309 (7) | 0.0059 (6) | −0.0042 (5) | −0.0062 (5) |
| C6 | 0.0340 (7) | 0.0356 (7) | 0.0272 (6) | 0.0037 (5) | 0.0051 (5) | 0.0026 (5) |
| C7 | 0.0288 (6) | 0.0249 (6) | 0.0465 (8) | −0.0013 (5) | 0.0043 (5) | −0.0014 (5) |
| C8 | 0.0284 (6) | 0.0234 (6) | 0.0371 (7) | −0.0034 (5) | 0.0042 (5) | −0.0038 (5) |
| C9 | 0.0309 (7) | 0.0336 (7) | 0.0385 (7) | −0.0038 (5) | 0.0097 (5) | 0.0021 (5) |
| C10 | 0.0352 (7) | 0.0348 (7) | 0.0349 (7) | −0.0028 (5) | 0.0019 (5) | 0.0031 (5) |
| C11 | 0.0268 (6) | 0.0293 (6) | 0.0404 (7) | −0.0052 (5) | 0.0016 (5) | −0.0049 (5) |
| C12 | 0.0318 (7) | 0.0448 (8) | 0.0402 (7) | −0.0106 (6) | 0.0075 (5) | 0.0056 (6) |
| C13 | 0.0343 (7) | 0.0377 (7) | 0.0377 (7) | −0.0067 (6) | 0.0023 (5) | 0.0067 (6) |
| C14 | 0.0375 (8) | 0.0456 (9) | 0.0652 (11) | −0.0059 (7) | −0.0124 (7) | 0.0064 (7) |
| N1 | 0.0249 (5) | 0.0262 (5) | 0.0300 (5) | −0.0014 (4) | 0.0030 (4) | 0.0001 (4) |
| O1 | 0.0430 (6) | 0.0598 (7) | 0.0307 (5) | −0.0174 (5) | 0.0094 (4) | −0.0094 (5) |
| O2 | 0.0365 (6) | 0.0453 (6) | 0.0553 (7) | 0.0001 (4) | 0.0051 (5) | 0.0202 (5) |
| O3 | 0.0268 (5) | 0.0473 (6) | 0.0553 (7) | −0.0067 (4) | −0.0021 (4) | 0.0046 (5) |
Geometric parameters (Å, º) top
| C2—O1 | 1.2381 (15) | C7—H7B | 0.9900 |
| C2—N1 | 1.3443 (16) | C8—C9 | 1.3865 (19) |
| C2—C3 | 1.5426 (18) | C8—C13 | 1.3977 (18) |
| C3—O2 | 1.4039 (16) | C9—C10 | 1.393 (2) |
| C3—C4 | 1.5145 (19) | C9—H9 | 0.9500 |
| C3—H3 | 1.0000 | C10—C11 | 1.3909 (19) |
| C4—C5 | 1.5160 (19) | C10—H10 | 0.9500 |
| C4—H4A | 0.9900 | C11—O3 | 1.3719 (16) |
| C4—H4B | 0.9900 | C11—C12 | 1.391 (2) |
| C5—C6 | 1.5121 (19) | C12—C13 | 1.3871 (19) |
| C5—H5A | 0.9900 | C12—H12 | 0.9500 |
| C5—H5B | 0.9900 | C13—H13 | 0.9500 |
| C6—N1 | 1.4717 (16) | C14—O3 | 1.4272 (19) |
| C6—H6A | 0.9900 | C14—H14A | 0.9800 |
| C6—H6B | 0.9900 | C14—H14B | 0.9800 |
| C7—N1 | 1.4753 (16) | C14—H14C | 0.9800 |
| C7—C8 | 1.5154 (18) | O2—H2 | 0.96 (2) |
| C7—H7A | 0.9900 | | |
| | | |
| O1—C2—N1 | 122.21 (12) | C8—C7—H7B | 109.2 |
| O1—C2—C3 | 119.16 (11) | H7A—C7—H7B | 107.9 |
| N1—C2—C3 | 118.62 (11) | C9—C8—C13 | 117.85 (12) |
| O2—C3—C4 | 109.87 (11) | C9—C8—C7 | 120.32 (11) |
| O2—C3—C2 | 110.71 (11) | C13—C8—C7 | 121.84 (12) |
| C4—C3—C2 | 112.93 (10) | C8—C9—C10 | 121.88 (12) |
| O2—C3—H3 | 107.7 | C8—C9—H9 | 119.1 |
| C4—C3—H3 | 107.7 | C10—C9—H9 | 119.1 |
| C2—C3—H3 | 107.7 | C11—C10—C9 | 119.33 (13) |
| C3—C4—C5 | 108.54 (11) | C11—C10—H10 | 120.3 |
| C3—C4—H4A | 110.0 | C9—C10—H10 | 120.3 |
| C5—C4—H4A | 110.0 | O3—C11—C10 | 123.94 (12) |
| C3—C4—H4B | 110.0 | O3—C11—C12 | 116.31 (12) |
| C5—C4—H4B | 110.0 | C10—C11—C12 | 119.75 (13) |
| H4A—C4—H4B | 108.4 | C13—C12—C11 | 120.02 (12) |
| C6—C5—C4 | 109.47 (10) | C13—C12—H12 | 120.0 |
| C6—C5—H5A | 109.8 | C11—C12—H12 | 120.0 |
| C4—C5—H5A | 109.8 | C12—C13—C8 | 121.16 (13) |
| C6—C5—H5B | 109.8 | C12—C13—H13 | 119.4 |
| C4—C5—H5B | 109.8 | C8—C13—H13 | 119.4 |
| H5A—C5—H5B | 108.2 | O3—C14—H14A | 109.5 |
| N1—C6—C5 | 112.35 (11) | O3—C14—H14B | 109.5 |
| N1—C6—H6A | 109.1 | H14A—C14—H14B | 109.5 |
| C5—C6—H6A | 109.1 | O3—C14—H14C | 109.5 |
| N1—C6—H6B | 109.1 | H14A—C14—H14C | 109.5 |
| C5—C6—H6B | 109.1 | H14B—C14—H14C | 109.5 |
| H6A—C6—H6B | 107.9 | C2—N1—C6 | 125.13 (11) |
| N1—C7—C8 | 112.04 (10) | C2—N1—C7 | 119.67 (11) |
| N1—C7—H7A | 109.2 | C6—N1—C7 | 114.78 (10) |
| C8—C7—H7A | 109.2 | C3—O2—H2 | 107.9 (12) |
| N1—C7—H7B | 109.2 | C11—O3—C14 | 117.08 (12) |
| | | |
| O1—C2—C3—O2 | −36.84 (16) | O3—C11—C12—C13 | 178.67 (13) |
| N1—C2—C3—O2 | 144.47 (12) | C10—C11—C12—C13 | −1.3 (2) |
| O1—C2—C3—C4 | −160.52 (12) | C11—C12—C13—C8 | 0.3 (2) |
| N1—C2—C3—C4 | 20.79 (15) | C9—C8—C13—C12 | 0.7 (2) |
| O2—C3—C4—C5 | −174.31 (10) | C7—C8—C13—C12 | −179.32 (12) |
| C2—C3—C4—C5 | −50.17 (14) | O1—C2—N1—C6 | 176.47 (12) |
| C3—C4—C5—C6 | 64.96 (14) | C3—C2—N1—C6 | −4.89 (17) |
| C4—C5—C6—N1 | −48.71 (15) | O1—C2—N1—C7 | 4.33 (18) |
| N1—C7—C8—C9 | −70.61 (15) | C3—C2—N1—C7 | −177.02 (10) |
| N1—C7—C8—C13 | 109.37 (14) | C5—C6—N1—C2 | 19.25 (17) |
| C13—C8—C9—C10 | −0.5 (2) | C5—C6—N1—C7 | −168.28 (10) |
| C7—C8—C9—C10 | 179.46 (12) | C8—C7—N1—C2 | 98.18 (13) |
| C8—C9—C10—C11 | −0.5 (2) | C8—C7—N1—C6 | −74.74 (14) |
| C9—C10—C11—O3 | −178.55 (12) | C10—C11—O3—C14 | −1.19 (19) |
| C9—C10—C11—C12 | 1.5 (2) | C12—C11—O3—C14 | 178.80 (13) |
Hydrogen-bond geometry (Å, º) top
| D—H···A | D—H | H···A | D···A | D—H···A |
| O2—H2···O1i | 0.96 (2) | 1.84 (2) | 2.7708 (16) | 161.6 (19) |
| C6—H6B···O1ii | 0.99 | 2.43 | 3.3142 (17) | 148 |
| C14—H14B···O2iii | 0.98 | 2.52 | 3.449 (2) | 158 |
| Symmetry codes: (i) −x, −y, −z+1; (ii) x, −y+1/2, z−1/2; (iii) −x+1, −y, −z+1. |
Hydrogen-bond geometry (Å, º) top
| D—H···A | D—H | H···A | D···A | D—H···A |
| O2—H2···O1i | 0.96 (2) | 1.84 (2) | 2.7708 (16) | 161.6 (19) |
| C6—H6B···O1ii | 0.99 | 2.43 | 3.3142 (17) | 148 |
| C14—H14B···O2iii | 0.98 | 2.52 | 3.449 (2) | 158 |
| Symmetry codes: (i) −x, −y, −z+1; (ii) x, −y+1/2, z−1/2; (iii) −x+1, −y, −z+1. |
This work was supported by the University of the Witwatersrand and the National
Research Foundation, Pretoria (grant No. 78837).
Boeyens, J. C. A. (1978). J. Cryst. Mol. Struct. 8, 317–320.
Bruker (2005). APEX2 and SAINT-NT. Bruker AXS Inc., Madison, Wisconsin, USA.
Davis, F. A., Sheppard, A. C., Chen, B.-C. & Haque, M. S. (1990). J. Am. Chem. Soc. 112, 6679–6690.
Farrugia, L. J. (2012). J. Appl. Cryst. 45, 849–854.
Keller, E. (1999). SCHAKAL99. University of Freiberg, Germany.
Michael, J. P., de Koning, C. B. & Pienaar, D. P. (2006). Synlett, pp. 383–386.
Murata, K., Takano, F., Fushiya, S. & Oshima, Y. (1998). J. Nat. Prod. 61, 729–733.
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122.
Spek, A. L. (2009). Acta Cryst. D65, 148–155.
The title piperidinone was prepared as an early intermediate for the total synthesis of febrifugine, a quinazoline alkaloid with potent antimalarial activity (Murata et al., 1998). Ongoing investigations in our laboratories have made use of similar lactams for the synthesis of febrifugine analogues (Michael et al., 2006). It should be noted that, although the 3-hydroxy substituent was introduced by attempted asymmetric hydroxylation of the enolate of 1-(4-methoxybenzyl)piperidin-2-one with (+)-camphorsulfonyloxaziridine (Davis et al., 1990), partial racemization occurred; the crystals selected for analysis proved to be racemic.
The title organic compound (Fig. 1) adopts a conformation in which the aromatic ring and the piperidine ring are almost perpendicular to each other. Ring puckering analysis, as implemented in PLATON (Spek, 2009), indicates that the piperidine ring adopts a twisted half-chair conformation owing to the presence of the carbonyl group (Boeyens, 1978). Several hydrogen bonds exist in the structure (Table 1), with the most significant being an O—H···O hydrogen bond. These result in the formation of hydrogen bonded pairs of molecules which are related to each other by a center of inversion (Fig. 1). These molecules interact further through C—H···O interactions (Fig. 2) resulting in an extensive hydrogen bonding network of molecules.