research communications
of seladelpar, C21H23F3O5S, from synchrotron powder diffraction data and density functional theory
aNorth Central College, Department of Chemistry, 131 S. Loomis St., Naperville IL 60540, USA, bNorth Central College, Department of Physics, 131 S. Loomis St., Naperville IL 60540, USA, cIllinois Institute of Technology, Department of Chemistry, 3101 S. Dearborn St., Chicago IL 60616, USA, and dICDD, 12 Campus Blvd., Newtown Square PA 19073-3273, USA
*Correspondence e-mail: [email protected]
The of seladelpar, C21H23F3O5S [systematic name 2-(4-{(2R)-2-ethoxy-3-[4-(trifluoromethyl)phenoxy]propylsulfanyl}-2-methylphenoxy)acetic acid], has been solved and refined using synchrotron X-ray powder diffraction data, and optimized using density functional theory techniques. Seladelpar crystallizes in space group P212121 and the molecule adopts a U-shaped conformation. The is characterized by layers lying parallel to the ab plane. One classical O—H⋯O hydrogen bond links the carboxylic acid group and an ether O into chains propagating along the b-axis direction and the chains are consolidated by a weak C—H⋯S hydrogen bond.
1. Chemical context
Seladelpar, C21H23F3O5S (marketed as Livdelzi, as the lysine dihydrate salt), is used to treat primary biliary cholangitis, an autoimmune disease of the liver (Shukla & Misra, 2025
). The systematic name (CAS Registry Number 851528-79-5) is 2-[4-[(2R)-2-ethoxy-3-[4-(trifluoromethyl)phenoxy]propyl]sulfanyl-2-methylphenoxy]acetic acid.
This work was carried out as part of a project (Kaduk et al., 2014
) to determine the crystal structures of large-volume commercial pharmaceuticals, and include high-quality powder diffraction data for them in the Powder Diffraction File (Kabekkodu et al., 2024
).
2. Structural commentary
The molecular structure of seladelpar is illustrated in Fig. 1
. The root-mean-square difference of the non-H atoms in the Rietveld-refined and VASP-optimized structures, calculated using the Mercury (Macrae et al., 2020
) CSD-Materials/search/crystal packing similarity tool is 0.139 Å (Fig. 2
); the structures are essentially identical. The root-mean-square Cartesian displacement of the non-H atoms in the refined and optimized structures, calculated using the Mercury Calculate/molecule overlay tool, is 0.112 Å (Fig. 3
). The agreements are within the normal range for correct structures (van de Streek & Neumann, 2014
). Given the normal representation of the molecule in an extended conformation, the bent solid-state conformation with the phenyl rings approximately parallel may be unexpected. The remaining discussion will emphasize the VASP-optimized structure.
| Figure 1 The molecular structure of seladelpar, based on the Rietveld refinement, with the atom numbering. The atoms are represented by 50% probability spheroids. |
| Figure 2 Comparison of the Rietveld-refined (colored by atom type) and VASP-optimized (pale green) structures of seladelpar, calculated using the Mercury CSD-Materials/Search/Crystal Packing Similarity tool. The root-mean-square Cartesian displacement is 0.139 Å. |
| Figure 3 Comparison of the refined structure of seladelpar (red) to the VASP-optimized structure (blue). The comparison was generated using the Mercury Calculate/Molecule Overlay tool; the r.m.s. difference is 0.112 Å. |
Almost all of the bond distances, bond angles, and torsion angles fall within the normal ranges indicated by a Mercury Mogul geometry check (Macrae et al., 2020
). Only the torsion angles involving rotation about the S1—C13 bond are flagged as unusual. They lie in broad valleys of bimodal 0/180° distributions of similar torsion angles, so the conformation of the molecule is slightly unusual, but not unprecedented. The mean plane of the aromatic ring with the trifluoromethyl substituent corresponds approximately with the (12) Miller plane, and the mean plane of the other phenyl ring is approximately (11
). The bent shape of the molecule is reflected in the normal S1—C11—C10—C12 (gauche) and O5—C10—C11—S1(trans) torsion angles (Table 1
).
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Quantum chemical geometry optimization of the isolated seladelpar molecule (DFT/B3LYP/6-31G*/water) using Spartan '24 (Wavefunction, 2025
) indicated that the observed conformation is 3.6 kcal mol−1 higher in energy than a local minimum, which has a similar overall shape (r.m.s. difference = 0.56 Å) but differences at the periphery of the molecule. The global minimum-energy conformation (MMFF force field) is 8.3 kcal mol−1 lower in energy, with a similar overall shape (r.m.s. difference = 1.76 Å) but with differences in the orientations of the carboxylic acid and trifluoromethyl groups. The conformation of seladelpar in the PDB entry 8HUP is very different from that observed here (Fig. 4
; r.m.s. difference = 2.80 Å) and 1.4 kcal mol−1 lower in energy. Apparently, the molecule is flexible, and intermolecular interactions are important in determining the observed conformation.
| Figure 4 Comparison of the molecular structure of seladelpar determined here (orange) with that in PDB entry 8HUP (green). The root-mean-square difference is 2.801 Å. |
3. Supramolecular features
The (Fig. 5
) is characterized by layers lying parallel to the ab plane. Parallel stacking of rings is apparent when viewed in different directions. The Mercury aromatics analyser indicates two strong (d = 5.09 Å) interactions between phenyl rings, three moderate (d = 5.89, 5.89, and 6.32 Å), and some weaker interactions (d > 8.7 Å). Analysis of the contributions to the total crystal energy of the structure using the Forcite module of Materials Studio (Dassault Systèmes, 2025
) indicated that the intramolecular energy is dominated by angle distortion terms, and that bond and torsion terms are also significant. The intermolecular energy is dominated by van der Waals attractions, which in this force field-based analysis include hydrogen bonds. The hydrogen bonds are better discussed using the results of the DFT calculation.
| Figure 5 Crystal structure of seladelpar, viewed down the a-axis direction. |
There is one classical O—H⋯O hydrogen bond in the structure (Table 2
). The energy of this bond (14.7 kcal mol−1) was calculated using the correlation of Rammohan & Kaduk (2018
). This links the carboxylic acid and the ether O5 atom into chains propagating along the b-axis direction, with graph-set motif (Etter, 1990
; Bernstein et al., 1995
; Motherwell et al., 2000
) C(13). A less-traditional (and from the overlap population, surprisingly strong) C—H⋯S hydrogen bond links an aromatic ring and the S atom, and reinforces the chains along the b-axis.
| ||||||||||||||||||||||
The volume enclosed by the Hirshfeld surface of seladelpar (Fig. 6
; Hirshfeld, 1977
; Spackman et al., 2021
) is 546.7 Å3 or 98.6% of 1/4 of the volume. The packing density is thus typical. The close contacts (red in Fig. 6
) involve the hydrogen bonds. The volume per non-hydrogen atom is normal, at 18.5 Å3.
| Figure 6 The Hirshfeld surface of seladelpar. Intermolecular contacts longer than the sums of the van der Waals radii are colored blue, and contacts shorter than the sums of the radii are colored red. Contacts approximately equal to the sums of radii are white. |
The Bravais–Friedel–Donnay–Harker (Bravais, 1866
; Friedel, 1907
; Donnay & Harker, 1937
) algorithm suggests that we might expect lozenge morphology for seladelpar, with {001} as the major faces. A second-order spherical harmonic model for preferred orientation was included. The texture index was 1.006, indicating that the preferred orientation was negligible in this rotated capillary specimen.
4. Database survey
Powder diffraction data for anhydrous and dihydrate lysine salts of seladelpar are reported in US Patent US 7,709,682 B2 (Abdel-Magid et al., 2010
; Janssen Pharmaceutical). We are unaware of any published powder diffraction data for seladelpar itself. The structures of several proteins complexed with seladelpar, have been determined (Kamata et al., 2023
; PDB entries 8HUN, 8HUO, and 8HUP). A reduced cell search in the Cambridge Structural Database (Groom et al., 2016
), with the chemistry C, H, F, O and S only, yielded no hits.
5. Synthesis and crystallization
Seladelpar is a commercial reagent, purchased from TargetMol (Batch #225397), and was used as-received.
6. Refinement
Crystal data, data collection and structure details are summarized in Table 3
. The white powder was packed into a 1.5 mm diameter Kapton capillary, and rotated during the measurement at 50 Hz. The powder pattern was measured at 295 K at beam line 11-BM (Lee et al., 2008
; Wang et al., 2008
; Antao et al., 2008
) of the Advanced Photon Source at Argonne National Laboratory using a wavelength of 0.4687342 Å from 0.5–50° 2θ with a step size of 0.001° and a counting time of 0.1 sec step−1. The high-resolution powder diffraction data were collected using twelve silicon crystal analyzers that allow for high angular resolution, high precision, and accurate peak positions. A mixture of silicon (NIST SRM 640c) and alumina (NIST SRM 676a) standards (ratio Al2O3:Si = 2:1 by weight) was used to calibrate the instrument and refine the monochromatic wavelength used in the experiment.
|
The pattern was indexed on a primitive orthorhombic with a = 8.87586, b = 10.62254, c = 23.54278 Å, V = 2219.7 Å3, and Z = 4 using N-TREOR as incorporated into EXPO2014 (Altomare et al., 2013
). The suggested space group was P212121, which was confirmed by the successful solution and refinement of the structure. This cell does not account for a few weak peaks, so the sample contains at least one crystalline impurity.
The molecular structure of seladelpar was downloaded from PubChem (Kim et al., 2023
) as Conformer3D_COMPOUND_CID_11236126.sdf. It was converted to a *.mol2 file using Mercury (Macrae et al., 2020
), and to a Fenske–Hall Z-matrix using OpenBabel (O'Boyle et al., 2011
). The structure was solved using parallel tempering techniques as implemented in FOX (Favre-Nicolin & Černý, 2002
).
Rietveld refinement was carried out using GSAS-II (Toby & Von Dreele, 2013
). Only the 1.5–19.0° portion of the pattern was included in the refinements (dmin = 1.420 Å). All non-H bond distances and angles were subjected to restraints, based on a Mercury/Mogul Geometry Check (Sykes et al., 2011
; Bruno et al., 2004
). The Mogul average and standard deviation for each quantity were used as the restraint parameters. The aromatic rings were restrained to be planar. The restraints contributed 7.3% to the overall χ2. The hydrogen atoms were included in calculated positions, which were recalculated during the refinement using Mercury. The Uiso values of the non-H atoms were grouped by chemical similarity. The Uiso of the H atoms were fixed at 1.2× the Uiso of the heavy atom to which they are attached. The peak profiles were described using the generalized microstrain model (Stephens, 1999
). The background was modeled using a six-term shifted Chebyshev polynomial, with a peak at 6.08° to model the scattering from the Kapton capillary and any amorphous component of the sample.
The final refinement of 114 variables using 17,501 observations and 75 restraints yielded the residuals Rwp = 0.0914 and GOF = 3.34. The largest peak (1.21 Å from F4) and hole (1.95 Å from S1) in the difference-Fourier map are 0.23 (4) and −0.20 (4) e Å−3, respectively. The final Rietveld plot is shown in Fig. 7
. The largest features in the normalized error plot are at the impurity peaks and in the shape of the lowest-angle 002 peak.
| | Figure 7 The Rietveld plot for seladelpar. The blue crosses represent the observed data points, and the green line is the calculated pattern. The cyan curve is the normalized error plot, and the red line is the background curve. The blue tick marks indicate the peak positions. The vertical scale has been multiplied by a factor of 20× for 2θ > 9.0°. |
The of seladelpar was optimized (fixed experimental unit cell) with density functional theory techniques using VASP (Kresse & Furthmüller, 1996
) through the MedeA graphical interface (Materials Design, 2024
). The calculation was carried out on 32 cores of a 144-core (768 Gb memory) HPE Superdome Flex 280 Linux server at North Central College. The calculation used the GGA-PBE functional, a plane wave cutoff energy of 400.0 eV, and a k-point spacing of 0.5 Å−1 leading to a 2 × 2 × 1 mesh, and took ∼11.9 h. Single-point density functional theory calculations (fixed experimental cell) and population analysis were carried out using CRYSTAL23 (Erba et al., 2023
). (fixed experimental cell) and population analysis were carried out using CRYSTAL17 (Dovesi et al., 2018
). The basis sets for the H, C, and O atoms in the calculation were those of Gatti et al. (1994
), and those for F and S were from Peintinger et al. (2013
). The calculations were run on a 3.5 GHz PC using 8 k-points and the B3LYP functional, and took ∼3.2 h. The powder pattern has been submitted to ICDD for inclusion in the Powder Diffraction File (PDF).
Supporting information
contains datablocks seladelpar, seladelpar_VASP. DOI: https://doi.org/10.1107/S2056989026007875/hb8227sup1.cif
| C21H23F3O5S | Z = 4 |
| Mr = 444.46 | Dx = 1.330 Mg m−3 |
| Orthorhombic, P212121 | Synchrotron radiation, λ = 0.46873 Å |
| a = 8.85689 (7) Å | µ = 0.02 mm−1 |
| b = 10.62563 (8) Å | T = 295 K |
| c = 23.57851 (14) Å | cylinder, 2.0 × 1.5 mm |
| V = 2218.98 (2) Å3 |
| 11-BM, APS diffractometer | Scan method: step |
| Specimen mounting: Kapton capillary | 2θmin = 0.510°, 2θmax = 49.995°, 2θstep = 0.001° |
| Data collection mode: transmission |
| Least-squares matrix: full | 114 parameters |
| Rp = 0.066 | 75 restraints |
| Rwp = 0.088 | 25 constraints |
| Rexp = 0.027 | Weighting scheme based on measured s.u.'s |
| R(F2) = 0.06486 | (Δ/σ)max = 11.051 |
| 49486 data points | Background function: Background function: "chebyschev-1" function with 6 terms: 83.2(15), 38.6(18), 1.6(7), -42.6(15), 20.8(9), 3.7(4), Background peak parameters: pos, int, sig, gam: 6.080(24), 7.1(3)e4, 3.46(12)e4, 0.100, |
| Profile function: Finger-Cox-Jephcoat function parameters U, V, W, X, Y, SH/L: peak variance(Gauss) = Utan(Th)2+Vtan(Th)+W: peak HW(Lorentz) = X/cos(Th)+Ytan(Th); SH/L = S/L+H/L U, V, W in (centideg)2, X & Y in centideg 1.163, -0.126, 0.063, 0.000, 0.000, 0.002, | Preferred orientation correction: Simple spherical harmonic correction Order = 2 Coefficients: 0:0:C(2,0) = -0.1570; 0:0:C(2,2) = 0.0680 |
| x | y | z | Uiso*/Ueq | ||
| S1 | −0.0693 (5) | 0.8031 (4) | 0.2987 (2) | 0.090 (2)* | |
| F2 | 0.7564 (9) | 0.5457 (7) | 0.0969 (4) | 0.110 (2)* | |
| F3 | 0.7032 (8) | 0.7385 (6) | 0.0780 (3) | 0.110 (2)* | |
| F4 | 0.5772 (9) | 0.5866 (7) | 0.0556 (3) | 0.110 (2)* | |
| O5 | 0.2116 (8) | 0.6317 (8) | 0.4072 (4) | 0.074 (2)* | |
| O6 | 0.3274 (10) | 0.6649 (8) | 0.2992 (4) | 0.074 (2)* | |
| O7 | 0.3205 (9) | 0.9186 (8) | 0.0999 (3) | 0.091 (2)* | |
| O8 | 0.4964 (8) | 1.2284 (8) | 0.0955 (5) | 0.091 (2)* | |
| O9 | 0.2451 (9) | 1.1752 (7) | 0.0908 (5) | 0.091 (2)* | |
| C10 | 0.1126 (10) | 0.6346 (9) | 0.3592 (4) | 0.074 (2)* | |
| C11 | 0.0640 (11) | 0.7684 (10) | 0.3557 (4) | 0.074 (2)* | |
| C12 | 0.1936 (12) | 0.5916 (10) | 0.3060 (4) | 0.074 (2)* | |
| C13 | 0.0490 (9) | 0.8496 (9) | 0.2404 (3) | 0.038 (3)* | |
| C14 | 0.1323 (11) | 0.6125 (11) | 0.4623 (5) | 0.074 (2)* | |
| C15 | 0.4075 (14) | 0.6504 (12) | 0.2525 (4) | 0.110 (2)* | |
| C16 | 0.1267 (10) | 0.8081 (8) | 0.1427 (3) | 0.038 (3)* | |
| C17 | 0.0330 (9) | 0.7833 (8) | 0.1890 (4) | 0.038 (3)* | |
| C18 | 0.1583 (11) | 0.9472 (8) | 0.2440 (3) | 0.038 (3)* | |
| C19 | 0.2459 (13) | 0.8937 (11) | 0.1496 (3) | 0.038 (3)* | |
| C20 | 0.2492 (11) | 0.9734 (9) | 0.1961 (4) | 0.038 (3)* | |
| C21 | 0.2342 (15) | 0.5533 (13) | 0.4997 (5) | 0.074 (2)* | |
| C22 | 0.5226 (13) | 0.7313 (10) | 0.2432 (4) | 0.110 (2)* | |
| C23 | 0.3515 (14) | 0.5777 (12) | 0.2093 (4) | 0.110 (2)* | |
| C24 | 0.5616 (11) | 0.6439 (11) | 0.1505 (4) | 0.110 (2)* | |
| C25 | 0.1227 (10) | 0.7196 (8) | 0.0935 (4) | 0.038 (3)* | |
| C26 | 0.5977 (12) | 0.7303 (11) | 0.1910 (4) | 0.110 (2)* | |
| C27 | 0.4405 (10) | 0.5645 (11) | 0.1606 (3) | 0.110 (2)* | |
| C28 | 0.6537 (8) | 0.6326 (6) | 0.0973 (3) | 0.110 (2)* | |
| C29 | 0.4303 (10) | 1.0128 (8) | 0.0970 (5) | 0.091 (2)* | |
| C30 | 0.3809 (9) | 1.1448 (7) | 0.0919 (8) | 0.091 (2)* | |
| H1 | 0.59404 | 1.18258 | 0.09406 | 0.1095* | |
| H2 | 0.01509 | 0.57462 | 0.36702 | 0.0882* | |
| H3 | 0.16412 | 0.82616 | 0.34929 | 0.0882* | |
| H4 | 0.01101 | 0.79351 | 0.39581 | 0.0882* | |
| H5 | 0.22332 | 0.49253 | 0.30988 | 0.0882* | |
| H6 | 0.12036 | 0.60460 | 0.26937 | 0.0882* | |
| H7 | 0.09737 | 0.70291 | 0.47965 | 0.0882* | |
| H8 | 0.03346 | 0.55313 | 0.45607 | 0.0882* | |
| H9 | −0.05405 | 0.71139 | 0.18531 | 0.0453* | |
| H10 | 0.17186 | 1.00095 | 0.28299 | 0.0453* | |
| H11 | 0.32173 | 1.05616 | 0.19577 | 0.0453* | |
| H12 | 0.33292 | 0.61300 | 0.50555 | 0.0882* | |
| H13 | 0.26901 | 0.46322 | 0.48197 | 0.0882* | |
| H14 | 0.17938 | 0.53796 | 0.54046 | 0.0882* | |
| H15 | 0.55678 | 0.79704 | 0.27622 | 0.1322* | |
| H16 | 0.24187 | 0.53194 | 0.21275 | 0.1322* | |
| H17 | 0.02154 | 0.66162 | 0.09621 | 0.0453* | |
| H18 | 0.22226 | 0.65950 | 0.09449 | 0.0453* | |
| H19 | 0.12138 | 0.77315 | 0.05412 | 0.0453* | |
| H20 | 0.68590 | 0.79927 | 0.18265 | 0.1322* | |
| H21 | 0.41411 | 0.49062 | 0.13016 | 0.1322* | |
| H22 | 0.49806 | 1.00599 | 0.13542 | 0.1095* | |
| H23 | 0.50063 | 0.99235 | 0.06025 | 0.1095* |
| S1—C11 | 1.826 (6) | C21—C14 | 1.410 (14) |
| S1—C13 | 1.798 (5) | C21—H12 | 1.089 (13) |
| F2—F3 | 2.149 (9) | C21—H13 | 1.088 (13) |
| F2—F4 | 1.912 (9) | C21—H14 | 1.090 (13) |
| F2—C28 | 1.296 (8) | C22—C15 | 1.352 (6) |
| F3—F2 | 2.149 (9) | C22—C26 | 1.399 (6) |
| F3—F4 | 2.032 (9) | C22—H15 | 1.089 (6) |
| F3—C28 | 1.291 (8) | C23—C15 | 1.371 (7) |
| F4—F2 | 1.912 (9) | C23—C27 | 1.399 (7) |
| F4—F3 | 2.032 (9) | C23—H16 | 1.089 (8) |
| F4—C28 | 1.290 (8) | C24—C26 | 1.362 (5) |
| O5—C10 | 1.431 (7) | C24—C27 | 1.385 (5) |
| O5—C14 | 1.491 (9) | C24—C28 | 1.502 (5) |
| O6—C12 | 1.428 (8) | C25—C16 | 1.494 (6) |
| O6—C15 | 1.319 (6) | C25—H17 | 1.089 (9) |
| O7—C19 | 1.370 (6) | C25—H18 | 1.089 (9) |
| O7—C29 | 1.397 (6) | C25—H19 | 1.089 (10) |
| O8—C30 | 1.357 (7) | C26—C22 | 1.399 (6) |
| O8—H1 | 0.993 (7) | C26—C24 | 1.362 (5) |
| O9—C30 | 1.246 (8) | C26—H20 | 1.089 (7) |
| C10—O5 | 1.431 (7) | C27—C23 | 1.399 (7) |
| C10—C11 | 1.488 (7) | C27—C24 | 1.385 (5) |
| C10—C12 | 1.516 (8) | C27—H21 | 1.090 (7) |
| C10—H2 | 1.089 (9) | C28—F2 | 1.296 (8) |
| C11—S1 | 1.826 (6) | C28—F3 | 1.291 (8) |
| C11—C10 | 1.488 (7) | C28—F4 | 1.290 (8) |
| C11—H3 | 1.089 (11) | C28—C24 | 1.502 (5) |
| C11—H4 | 1.088 (10) | C29—O7 | 1.397 (6) |
| C12—O6 | 1.428 (8) | C29—C30 | 1.474 (7) |
| C12—C10 | 1.516 (8) | C29—H22 | 1.089 (12) |
| C12—H5 | 1.089 (11) | C29—H23 | 1.089 (10) |
| C12—H6 | 1.089 (11) | C30—O8 | 1.357 (7) |
| C13—S1 | 1.798 (5) | C30—O9 | 1.246 (8) |
| C13—C17 | 1.409 (5) | C30—C29 | 1.474 (7) |
| C13—C18 | 1.421 (6) | H1—O8 | 0.993 (7) |
| C14—O5 | 1.491 (9) | H2—C10 | 1.089 (9) |
| C14—C21 | 1.410 (14) | H3—C11 | 1.089 (11) |
| C14—H7 | 1.089 (11) | H4—C11 | 1.088 (10) |
| C14—H8 | 1.089 (11) | H5—C12 | 1.089 (11) |
| C15—O6 | 1.319 (6) | H6—C12 | 1.089 (11) |
| C15—C22 | 1.352 (6) | H7—C14 | 1.089 (11) |
| C15—C23 | 1.371 (7) | H8—C14 | 1.089 (11) |
| C16—C17 | 1.396 (4) | H9—C17 | 1.089 (6) |
| C16—C19 | 1.403 (6) | H10—C18 | 1.089 (7) |
| C16—C25 | 1.494 (6) | H11—C20 | 1.089 (7) |
| C17—C13 | 1.409 (5) | H12—C21 | 1.089 (13) |
| C17—C16 | 1.396 (4) | H13—C21 | 1.088 (13) |
| C17—H9 | 1.089 (6) | H14—C21 | 1.090 (13) |
| C18—C13 | 1.421 (6) | H15—C22 | 1.089 (6) |
| C18—C20 | 1.414 (6) | H16—C23 | 1.089 (8) |
| C18—H10 | 1.089 (7) | H17—C25 | 1.089 (9) |
| C19—O7 | 1.370 (6) | H18—C25 | 1.089 (9) |
| C19—C16 | 1.403 (6) | H19—C25 | 1.089 (10) |
| C19—C20 | 1.387 (6) | H20—C26 | 1.089 (7) |
| C20—C18 | 1.414 (6) | H21—C27 | 1.090 (7) |
| C20—C19 | 1.387 (6) | H22—C29 | 1.089 (12) |
| C20—H11 | 1.089 (7) | H23—C29 | 1.089 (10) |
| C11—S1—C13 | 104.0 (4) | C16—C19—C20 | 120.2 (4) |
| C10—O5—C14 | 113.8 (5) | C18—C20—C19 | 120.0 (4) |
| C12—O6—C15 | 118.4 (6) | C18—C20—H11 | 120.1 (7) |
| C19—O7—C29 | 121.1 (6) | C19—C20—H11 | 119.9 (7) |
| C30—O8—H1 | 109.5 (7) | C14—C21—H12 | 109.5 (12) |
| O5—C10—C11 | 104.0 (6) | C14—C21—H13 | 109.5 (11) |
| O5—C10—C12 | 110.9 (7) | H12—C21—H13 | 109.5 (11) |
| C11—C10—C12 | 112.3 (7) | C14—C21—H14 | 109.4 (11) |
| O5—C10—H2 | 109.9 (7) | H12—C21—H14 | 109.4 (11) |
| C11—C10—H2 | 109.8 (9) | H13—C21—H14 | 109.5 (12) |
| C12—C10—H2 | 109.8 (8) | C15—C22—C26 | 119.7 (3) |
| S1—C11—C10 | 114.9 (6) | C15—C22—H15 | 120.1 (7) |
| S1—C11—H3 | 108.1 (6) | C26—C22—H15 | 120.1 (7) |
| C10—C11—H3 | 108.1 (8) | C15—C23—C27 | 117.5 (5) |
| S1—C11—H4 | 108.1 (7) | C15—C23—H16 | 121.3 (8) |
| C10—C11—H4 | 108.1 (8) | C27—C23—H16 | 121.2 (7) |
| H3—C11—H4 | 109.5 (8) | C26—C24—C27 | 118.1 (3) |
| O6—C12—C10 | 108.8 (6) | C26—C24—C28 | 120.8 (4) |
| O6—C12—H5 | 109.6 (10) | C27—C24—C28 | 121.1 (4) |
| C10—C12—H5 | 109.7 (9) | C16—C25—H17 | 109.3 (6) |
| O6—C12—H6 | 109.6 (10) | C16—C25—H18 | 109.4 (9) |
| C10—C12—H6 | 109.7 (8) | H17—C25—H18 | 109.5 (8) |
| H5—C12—H6 | 109.5 (7) | C16—C25—H19 | 109.5 (8) |
| S1—C13—C17 | 117.5 (5) | H17—C25—H19 | 109.7 (8) |
| S1—C13—C18 | 123.5 (6) | H18—C25—H19 | 109.5 (7) |
| C17—C13—C18 | 119.0 (3) | C22—C26—C24 | 120.7 (4) |
| O5—C14—C21 | 107.7 (8) | C22—C26—H20 | 119.7 (6) |
| O5—C14—H7 | 109.9 (11) | C24—C26—H20 | 119.7 (7) |
| C21—C14—H7 | 109.9 (10) | C23—C27—C24 | 121.1 (4) |
| O5—C14—H8 | 109.9 (8) | C23—C27—H21 | 119.5 (6) |
| C21—C14—H8 | 109.9 (12) | C24—C27—H21 | 119.4 (6) |
| H7—C14—H8 | 109.5 (9) | F2—C28—F3 | 112.4 (6) |
| O6—C15—C22 | 117.8 (6) | F2—C28—F4 | 95.3 (6) |
| O6—C15—C23 | 119.5 (7) | F3—C28—F4 | 103.8 (6) |
| C22—C15—C23 | 120.7 (4) | F2—C28—C24 | 116.4 (6) |
| C17—C16—C19 | 118.6 (3) | F3—C28—C24 | 114.2 (5) |
| C17—C16—C25 | 118.3 (4) | F4—C28—C24 | 112.4 (5) |
| C19—C16—C25 | 121.1 (4) | O7—C29—C30 | 118.6 (7) |
| C13—C17—C16 | 121.2 (3) | O7—C29—H22 | 107.1 (8) |
| C13—C17—H9 | 119.3 (6) | C30—C29—H22 | 107.1 (11) |
| C16—C17—H9 | 119.4 (6) | O7—C29—H23 | 107.1 (8) |
| C13—C18—C20 | 118.9 (4) | C30—C29—H23 | 107.2 (11) |
| C13—C18—H10 | 120.6 (7) | H22—C29—H23 | 109.5 (8) |
| C20—C18—H10 | 120.5 (8) | O8—C30—O9 | 124.0 (6) |
| O7—C19—C16 | 112.9 (5) | O8—C30—C29 | 113.2 (6) |
| O7—C19—C20 | 123.2 (6) | O9—C30—C29 | 122.3 (6) |
| C21H23F3O5S | b = 10.62563 Å |
| Mr = 444.46 | c = 23.57851 Å |
| Orthorhombic, P212121 | V = 2218.97 Å3 |
| a = 8.85689 Å | Z = 4 |
| x | y | z | Biso*/Beq | ||
| S1 | −0.06226 | 0.81067 | 0.29800 | ||
| F2 | 0.77456 | 0.54746 | 0.09473 | ||
| F3 | 0.71686 | 0.74416 | 0.07619 | ||
| F4 | 0.56934 | 0.59128 | 0.04659 | ||
| O5 | 0.21714 | 0.62095 | 0.40710 | ||
| O6 | 0.32888 | 0.66722 | 0.29666 | ||
| O7 | 0.31495 | 0.92206 | 0.09562 | ||
| O8 | 0.50360 | 1.22795 | 0.08729 | ||
| O9 | 0.25766 | 1.17937 | 0.08604 | ||
| C10 | 0.11756 | 0.64131 | 0.35934 | ||
| C11 | 0.06945 | 0.77962 | 0.35565 | ||
| C12 | 0.19659 | 0.59245 | 0.30683 | ||
| C13 | 0.05734 | 0.84570 | 0.23965 | ||
| C14 | 0.14147 | 0.61905 | 0.46174 | ||
| C15 | 0.40328 | 0.65185 | 0.24652 | ||
| C16 | 0.12593 | 0.80438 | 0.14067 | ||
| C17 | 0.04109 | 0.77718 | 0.18907 | ||
| C18 | 0.16162 | 0.94442 | 0.24135 | ||
| C19 | 0.23206 | 0.90300 | 0.14406 | ||
| C20 | 0.24941 | 0.97255 | 0.19398 | ||
| C21 | 0.24516 | 0.55791 | 0.50448 | ||
| C22 | 0.52414 | 0.73468 | 0.23699 | ||
| C23 | 0.36658 | 0.56059 | 0.20585 | ||
| C24 | 0.56755 | 0.63829 | 0.14545 | ||
| C25 | 0.11139 | 0.72919 | 0.08716 | ||
| C26 | 0.60502 | 0.72797 | 0.18674 | ||
| C27 | 0.44978 | 0.55388 | 0.15579 | ||
| C28 | 0.65496 | 0.63091 | 0.09138 | ||
| C29 | 0.43670 | 1.00800 | 0.09718 | ||
| C30 | 0.38886 | 1.14525 | 0.08996 | ||
| H1 | 0.60569 | 1.18687 | 0.09182 | ||
| H2 | 0.01570 | 0.58277 | 0.36528 | ||
| H3 | 0.16772 | 0.84182 | 0.35156 | ||
| H4 | 0.00738 | 0.80551 | 0.39423 | ||
| H5 | 0.22856 | 0.49313 | 0.31316 | ||
| H6 | 0.11867 | 0.59834 | 0.27056 | ||
| H7 | 0.11314 | 0.71583 | 0.47476 | ||
| H8 | 0.03500 | 0.56616 | 0.45721 | ||
| H9 | −0.03852 | 0.69872 | 0.18759 | ||
| H10 | 0.17493 | 1.00072 | 0.27971 | ||
| H11 | 0.32779 | 1.05128 | 0.19648 | ||
| H12 | 0.35153 | 0.61041 | 0.50867 | ||
| H13 | 0.26913 | 0.45973 | 0.49293 | ||
| H14 | 0.19102 | 0.55929 | 0.54627 | ||
| H15 | 0.55108 | 0.80474 | 0.26919 | ||
| H16 | 0.27245 | 0.49580 | 0.21180 | ||
| H17 | 0.02872 | 0.65325 | 0.09216 | ||
| H18 | 0.22091 | 0.68798 | 0.07532 | ||
| H19 | 0.07661 | 0.78864 | 0.05126 | ||
| H20 | 0.69791 | 0.79322 | 0.17921 | ||
| H21 | 0.42195 | 0.48166 | 0.12463 | ||
| H22 | 0.50381 | 0.99822 | 0.13638 | ||
| H23 | 0.51065 | 0.98199 | 0.06162 |
| C13—S1—C11—C10 | −89.2 | C11—C10—O5—C14 | 75.6 |
| S1—C11—C10—C12 | 60.4 | C10—O5—C14—C21 | 162.4 |
| O5—C10—C11—S1 | −177.7 | C10—C12—O6—C15 | −169.8 |
| C17—C13—S1—C11 | 125.4 | O5—C10—C12—O6 | −64.9 |
| C18—C13—S1—C11 | −58.4 | C19—O7—C29—C30 | −82.2 |
| C11—C10—C12—O6 | 58.8 |
| D—H···A | D—H | H···A | D···A | D—H···A |
| O8—H1···O5i | 1.01 | 1.72 | 2.725 | 175 |
| C23—H16···S1ii | 1.09 | 2.72 | 3.785 | 166 |
| Symmetry codes: (i) −x+1, y+1/2, −z+1/2; (ii) −x, y−1/2, −z+1/2. |
Acknowledgements
Use of the Advanced Photon Source at Argonne National Laboratory was supported by the US Department of Energy, Office of Science, Office of Basic Energy Sciences, under Contract No. DE-AC02–06CH11357. We thank Saul Lapidus for his assistance in the data collection. We also thank the ICDD team – Steve Trimble, and Dave Bohnenberger – for their contribution to research, sample preparation, and in-house XRD data collection and verification.
Funding information
Funding for this research was provided by: International Centre for Diffraction Data (grant No. 09-03).
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