issue contents
May 2016 issue
research communications
Two high-resolution co-crystal structures of the mitotic protein kinase haspin with previously reported conjugates consisting of an ATP analogue and a histone H3(1–7) peptide analogue confirm the bisubstrate character of the compounds and provide directions for the future development of more specific haspin inhibitors.
A novel and affordable fragment library was assembled and applied to the model protease endothiapepsin in a crystallographic fragment-screening experiment.
PDB references: endothiapepsin, complex with fragment 29, 4y38; complex with fragment 30, 4y3j; complex with fragment 39, 4ze6; complex with fragment 42, 4y3y; complex with fragment 50, 4y48; complex with fragment 51, 4y4d; complex with fragment 53, 4y4g; complex with fragment 91, 4zea; complex with fragment 97, 4y4j
The expression, purification and crystallization of the DNA-binding Myb domain of LUX ARRHYTHMO from A. thaliana in complex with DNA are reported. The binding affinity of the Myb domain for DNA was measured and was found to be in the low-nanomolar range, suggesting that a single Myb domain is able to bind to its cognate DNA with very high affinity.
The crystal structure of the dioxygenase FrbJ is reported. An access tunnel was found at the back of the active site, which connects the putative binding site for α-ketoglutarate to the solvent.
PDB reference: phosphonate hydroxylase, 5eqn
The crystal structure of ketopantoate reductase complexed with NADP+ was determined at 2.3 Å resolution.
PDB reference: ketopantoate reductase complexed with NADP+, 5hws
Bile salt hydrolase is an enzyme that is produced by various commensal bacteria in the intestine and is also a key mechanistic microbiome target for enhanced animal and human health.
PDB reference: bile salt hydrolase, 5hke
The periplasmic sensing domain of V. fischeri chemoreceptor protein A was purified and crystallized. Analysis of an X-ray diffraction data set collected to 1.8 Å resolution is presented.
A crystallographic analysis of the stationary-phase survival protein from B. abortus is reported.
The X-ray crystal structure of the RRM domain of human RBM7 reveals a pentameric assembly.
PDB reference: human RBM7 RRM domain, 5iqq
PvdN (PA2394) from P. aeruginosa is a nonribosomal peptide synthetase tailoring enzyme that is involved in pyoverdine biosynthesis. PvdN has been identified as a periplasmic protein that is pyridoxal 5′-phosphate-dependent and shows homology to class I aminotransferases. Here, the crystal structure of PvdN is reported at 1.22 Å resolution.
PDB reference: PvdN, 5i90
The crystal structure of Prp28 from C. thermophilum is reported at 3.2 Å resolution. This DEAD-box helicase exhibits multiple functions during spliceosome assembly.