forthcoming articles
The following articles are a selection of those recently accepted for publication in IUCr journals.
| Acta Crystallographica Section A Acta Crystallographica Section A FOUNDATIONS AND ADVANCES |
Tiles from projections of the root and weight lattices of An
The 2D faces of the Voronoi cell of the lattice A4* are of two types: regular hexagons and squares in 4D but project into two types of hexagons and two types of rhombuses with edges of two lengths in proportion to the golden ratio.
Beyond complementarity: a reverse-engineering framework for de novo crystal structure determination from EXAFS
This study introduces and validates a novel methodological paradigm that transforms extended X-ray absorption fine structure (EXAFS) spectroscopy from a complementary local probe into a primary, stand-alone tool for determining complete crystal structures.
Crystallography in Open Science and its open educational resources
Open Science is the movement to make scientific research, the data and their dissemination available to any member of an inquiring society, from professionals to citizens, irrespective of their economic situation. The IUCr provides fully open educational resources to Global South and Global North readers and authors.
| Acta Crystallographica Section B Acta Crystallographica Section B STRUCTURAL SCIENCE, CRYSTAL ENGINEERING AND MATERIALS |
Interaction Analysis with[within/tool from?] the Cambridge Structural Database – rapid access to intermolecular hydrogen bond frequencies and uses for coformer selection
We describe a coformer selection tool that uses knowledge of functional group interactions found in the Cambridge Structural Database to quickly identify complementary molecules to the target.
Thermostructural and elastic properties of Ni3V2O8, exhibiting a kagome layer arrangement: experimental study in the range 15–1323 K
The anisotropic thermal expansion of nickel orthovanadate is examined in detail for the first time, focusing on bond lengths, bond angles, polyhedra volume, and distortion.
High-pressure and high-temperature polymorphism of Na2CO3 up to 10 GPa.
Two new high-pressure polymorphs of sodium carbonate, epsilon and epsilon-II, are observed in in situ single-crystal and large-volume press experiments. By integrating these results with phase-transition data over a broad pressure–temperature range, we refine the Na2CO3 phase diagram, revealing expanded stability fields for both the incommensurate γ phase and the ɛ polymorph at mantle-relevant conditions.
| Acta Crystallographica Section C Acta Crystallographica Section C STRUCTURAL CHEMISTRY |
Weak interactions defining the crystal packing in the sterically demanding compound 1-(3-methylphenyl)-2-(4-nitrophenyl)-4,5-diphenyl-1H-imidazole
Crystals from a tetrasubstituted 1H-imidazole were obtained and theoretical calculations were carried out to determine electronic and structural properties. Weak interactions define the crystal packing in this sterically demanding compound. The nitro groups play a key role by their influence on the polarization of the molecule.
Can halogen atoms in coumarin derivatives affect the structure and antiproliferative activity of nickel(II) complexes?
The characterization and description of the crystal structures of new halogenated coumarin derivatives and their nickel(II) complexes are reported alongside their anticancer activity.
Halogen and hydrogen bonding of 3,6-bis(pyridin-2-yl)-1,2,4,5-tetrazine and 3,6-bis(pyridin-4-yl)-1,2,4,5-tetrazine
Seven new crystal structures of 3,6-bis(pyridin-2-yl)- and 3,6-bis(pyridin-4-yl)-1,2,4,5-tetrazine with halogen- and hydrogen-bond donors reveal how pyridyl orientation and donor type govern supramolecular assembly, producing hydrogen-bonded triads and chains. Variations in pyridine-to-tetrazine dihedral angles, stacking, and donor interactions highlight the tunability of these tetrazines for directing crystal packing and noncovalent interactions in designed materials.
From central chirality to helical chirality: two chiral coordination polymers based on lactic acid derivative and their SHG responses
Two chiral coordination polymers based on a new lactic acid derivative ligand show efficient transfer from central chirality to helical chirality and exhibit notable SHG responses.
| Acta Crystallographica Section D Acta Crystallographica Section D STRUCTURAL BIOLOGY |
Protein Data Bank (PDB) Archive: A New Architecture (Beta) for Scalable, PDBx/mmCIF-Based Data Distribution
wwPDB has extended PDB IDs to 12 characters with a prefix "pdb_" followed by 8 alphanumeric characters in lower case (e.g., pdb_1000axyz). A Beta version of the PDB Archive (files-beta.wwpdb.org), with extended PDB IDs and an improved directory structure is now available to help communities adopt extended PDB IDs and PDBx/mmCIF format.
Crystal structure of endo-β-1,6-galactanase from Streptomyces avermitilis
The crystal structure of Streptomyces avermitilis endo-β-1,6-galactanase Sa16Gal30A belonging to GH30 subfamily 5 reveals the first structural framework for endo-β-1,6-galactanase. The β-1,6-galactobiose-bound complex identifies the catalytic subsites and a distal secondary sugar-binding site, providing insight into β-1,6-galactan recognition.
Crystal structure of pilus-specific sortase from Enterococcus faecalis reveals both open and closed conformations: insights into loop dynamics and substrate recognition
The open and closed lid conformational states of class C sortase (SrtC), which catalyzes the polymerization of endocarditis and biofilm-associated pili (Ebp) in Enterococcus faecalis, were captured in a single crystal. Communication between the flexible lid and the dynamic active-site (β7–β8) loop, along with their synchronized motions, regulates access to the active site for primary and secondary substrate binding.
Interactive segmentation of membrane and membrane-mimic densities in cryo-EM maps
SURFER performs automated segmentation of contextual membrane and membrane mimic density in cryo-EM maps to enable robust separation of macromolecular signal from surrounding detergent or lipid membrane features. It is conveniently distributed as a plugin for UCSF ChimeraX, allowing interactive application within standard map visualization workflows.
Experimental estimation of copper-site geometry reproducibility in biologically relevant redox and saccharide-bound states of a model LPMO
Small but measurable changes in the coordination geometry of LPMO Cu active site are revealed by X-ray crystallography, providing structural insight into their catalytic flexibility.
Structural basis of regioselective double halogenation of the β-carboline tryptoline by the single-component halogenase AetF
Abstract A structure of the flavin-dependent single-component tryptophan halogenase AetF bound to the non-native tricyclic substrate tryptoline reveals a binding pose analogous to l-tryptophan that directs C6-first halogenation. Product analysis identifies 6,8-dibromotryptoline as the final product.
Simulating neutron protein crystallography experiments: applications to the development of the NMX instrument at ESS
Monte Carlo simulations of neutron protein diffraction experiments provide useful data that models neutrons interacting with instrument components, as well as the crystal diffraction itself. These data can be applied to instrument development, such as the commissioning of the NMX Macromolecular Diffractometer at ESS.
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| Acta Crystallographica Section E Acta Crystallographica Section E CRYSTALLOGRAPHIC COMMUNICATIONS |
Synthesis and crystal structure of fac-[3-bromo-6-(1H-pyrazol-1-yl-κN2)pyridazine-κN1]tricarbonylchloridorhenium dimethylformamide monosolvate
The reaction of pypyrBr [3-bromo-6-(1H-pyrazol-1-yl)pyridazine] with Re(CO)5Cl in refluxing toluene leads to fac-[(κ2-N,N-pypyrBr)Re(CO)3Cl] in a 48% yield. Crystallization leads to a 1:1 dimethylformamide solvate, with hydrogen bonding between the dmf molecule and the pyrazolylriridazine fragment on the octahedral [(pypyrBr)Re(CO)3Cl] molecule.
Synthesis and structure of 4-[(2,3,4,5,6-pentafluorophenoxy)carbonyl]phenyl 4-(tetradecyloxy)benzoate
In the title molecule, the dihedral angles between the central carbonylphenyl and adjacent perfluorophenoxy and (tetradecyloxy)benzoate rings are 74.19 (2) and 67.86 (2)°, respectively and the tetradecyl chain adopts an extended conformation. In the crystal, the molecules are linked by C—H⋯O and C—H⋯F hydrogen bonds, forming C(7) and C(10) chains, respectively, both running infinitely along [010].
Synthesis, crystal structure and Hirshfeld surface analysis of 2-(2,5-dioxo-4,4-diphenylimidazolidin-1-yl)-N-(4-fluorophenyl)acetamide (phenytoin analog)
In the title molecule, the imidazolidine ring is slightly non-planar and the 4-fluorophenylacetamide substituent extends up and out from the mean plane of this ring. In the crystal, inversion-related N—H⋯O hydrogen bonds form dimers, which are connected into layers parallel to the bc plane by additional N—H⋯O hydrogen bonds. The layers pack along the a-axis direction with normal van der Waals contacts. A Hirshfeld surface analysis was performed.
Synthesis, crystal structure and Hirshfeld surface analysis of N-(2,6-dimethylphenyl)-2-morpholinoacetamide, a Lidocaine analog
In the title molecule, the dihedral angle between the mean plane of the phenyl ring and that defined by the ipso-C—NH—(C=O)—CH2— unit is 66.59 (11)°. In the crystal, N—H⋯O hydrogen bonds and C—H⋯π(ring) interactions form chains extending along the b-axis direction. A Hirshfeld surface analysis showed H⋯H contacts to constitute nearly 70% of the intermolecular contacts in the crystal.
| Acta Crystallographica Section F Acta Crystallographica Section F STRUCTURAL BIOLOGY COMMUNICATIONS |
WebCalEM: a browser-based tool for routine and accurate pixel size calibration in cryo-EM
WebCalEM is a browser-based, install-free application that performs routine cryo-EM pixel-size calibration directly from gold or graphene-oxide reflections in standard sample-support grids using sub-pixel Fourier-space peak localization; it reproduces the precision of established command-line calibration tools while removing the installation barrier and supporting retrospective per-region calibration on archived datasets.
| Journal of Applied Crystallography Journal of Applied Crystallography |
Temperature evolution of the high-harmonic magnetic modulations in DyFeO3
The temperature evolution of the high-harmonics incommensurate magnetic ordering of Dy3+ in DyFeO3 orthoferrite is compared with the literature results on the soliton lattice of TbFeO3 observed in an external magnetic field.
Feasibility of correlation-aware inference and universal precision scaling in Bonse–Hart ultra-small-angle neutron scattering
Bonse–Hart USANS measurements are often limited by counting statistics. By taking advantage of the smooth variation of I(Q) with Q, we show that Gaussian-process-based inference can recover the main structural features of the scattering profile from lower-count data and can identify when further counting no longer improves precision because instrument discretization becomes limiting.
Small-angle polarized neutron scattering study of strontium hexaferrite nanoplatelet ferrofluid
Structural and magnetic ordering in a ferrofluid consisting of hard magnetic SrFe12O19 nanoplatelets is studied by polarized small-angle neutron scattering in magnetic fields up to 1000 Oe. The results reveal consecutive and reversible transitions of the isotropically disordered phase existing at H < 20 Oe into a 1D-nematic columnar structure at 20 < H < 250 Oe, followed by rearrangement to smectic-like lateral ordering with collinear magnetization in neighboring columns above H = 250 Oe.
Analytical desmearing of Bonse–Hart ultra-small-angle neutron scattering data via truncated Abel inversion
A non-iterative analytical framework based on truncated Abel inversion is developed for desmearing slit-geometry ultra-small-angle neutron scattering data. The method directly relates measured and intrinsic intensities without iterative or empirical corrections, and achieves accurate and stable recovery of scattering profiles. Application to polymer-blend data demonstrates smooth continuity with small-angle neutron scattering measurements, enabling rigorous and model-independent data integration.
Data-driven prediction of crystal growth kinetics in polymer-stabilized amorphous drugs
The purpose of this study was to develop a novel machine learning integrated framework for predicting the crystallization kinetics of amorphous drugs doped with low-concentration polymer. Several critical features influencing crystallization of amorphous solid dispersions were identified, encompassing active pharmaceutical ingredient related molecular descriptors and polymer-specific properties.
NeuDiff Agent: a governed AI workflow for single-crystal neutron crystallography
NeuDiff Agent accelerates the TOPAZ single-crystal neutron diffraction workflow at the Spallation Neutron Source from measured data to a structure suitable for publication through governed tool execution, auditable provenance and checkCIF assessment.
Shannon sampling based approach for the structural solution of nano-objects by laboratory and synchrotron SAXS data
We present a model-independent approach based on the Shannon sampling theorem to retrieve key structural parameters of proteins and core–shell micelles directly from small-angle X-ray scattering (SAXS) profiles. By bypassing the pair distribution function, the method overcomes q-truncation artifacts and provides reliable mass, size and aggregation number estimates even from noisy laboratory data. This formalism enables fast, robust and high-throughput analysis for both in situ and operando experiments.
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| Journal of Synchrotron Radiation Journal of Synchrotron Radiation |
Sagittal collimating diaboloid: a new grazing incidence mirror surface for higher throughput RIXS spectrometers
We present the analytic equations for a new grazing incidence mirror surface, a sagittal collimating diaboloid, and illustrate its advantages for higher throughput soft X-ray spectrometer design.
A robotic and high-throughput X-ray micro-computed tomography workflow
A high-throughput and automated experimental workflow for synchrotron X-ray micro-computed tomography is demonstrated. The system integrates automated robotic sample exchange and data acquisition, enabling large-scale and data-driven research.
Evolution of hierarchical phase-contrast tomography on the European Synchrotron beamlines BM05 and BM18: a whole adult human brain imaging case study
This article shows the evolution of hierarchical phase-contrast tomography (HiP-CT) from its origins at the BM05 beamline to its transition to BM18 (ESRF-EBS). The novel hardware and scanning approach developments resulted in significantly improved data quality, resolution, sensitivity and speed. The case of whole adult brain imaging is presented to demonstrate the current possibilities of full-organ imaging with local micrometre resolution using HiP-CT.
A unified analytical framework for Mössbauer synchrotron sources
We present a unified analytical framework for Mössbauer synchrotron and X-ray free-electron laser sources that provides exact, rotationally invariant expressions for resonance energies and transition probabilities in mixed magnetic dipole–electric quadrupole interactions without Hamiltonian diagonalization. The invariant formalism enables efficient modeling and quantitative identifiability analysis, demonstrating that polarization control—especially orthogonal linear polarizations—significantly enhances the determination of hyperfine parameters in complex materials.
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How cryoEM has advanced our understanding of bacteriophages and bacteriocins targeting Clostridioides difficile
Two recent cryogenic electron microscopy (cryoEM) structures provide a unique opportunity to compare a bacteriophage and a bacteriocin targeted at the same host. CryoEM reveals the most detailed view of contractile injection systems interacting with Clostridioides difficile.
Towards time-resolved MicroED grid preparation using mix-and-inject gas dynamic virtual nozzles
This article establishes the feasibility of time-resolved microcrystal electron diffraction by using a microfluidic mixing device to deposit microcrystals onto electron microscopy grids during plunge-freezing. The resulting vitrified crystals were of sufficient quality to solve a model protein structure.
CryoEM structures reveal allosteric regulation of the catalytic activity of the multi-protein human MAT enzyme complexes
High-resolution cryoEM structures of MAT enzyme complexes help to explain why MATα1 selectively forms a stable complex with MATβ2V1 but not with MATβ2V2, despite sharing high sequence and structural identity with MATα2.
| IUCrData IUCrData |
(2-Aminocyclohexanol-κ2N,O)chlorido(η6-p-cymene)ruthenium(II) tetrafluoroborate (2-aminocyclohexanolato-κ2N,O)chlorido(η6-p-cymene)ruthenium(II)
The title compound crystallizes with one neutral RuII species, one cationic RuII species and a BF4− counter-ion in the asymmetric unit. Both RuII centres adopt the expected piano-stool geometry, with the η6-p-cymene ligand forming the seat and the chlorido and bidentate amino-alcohol-derived ligands occupying the remaining coordination sites.

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