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Journal logoCRYSTALLOGRAPHIC
COMMUNICATIONS
ISSN: 2056-9890

December 2023 issue

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Cover illustration: 2-(2-Hydroxyphenyl)benzimidazoles are a class of photoluminescent ligands, the properties of which can be tuned through complexation to different metal centres. The present study discusses the synthesis and structural characterization of two new bi-nuclear complexes of Mn and Co with benzimidazole derivatives, stemming from a longstanding collaboration between the Laboratoire de Chimie de Coordination Organique (LCCO), University of Dakar, Senegal, and the National Crystallography Service (NCS), School of Chemistry, University of Southampton, UK. This collaboration is one of the many successful programmes (such as the IUCr Crystallography in Africa Initiative or the IUCr–UNESCO OpenLab network) to foster and promote crystallography throughout the African continent. The paper is also included in a special collection celebrating the recent founding of the African Crystallographic Association. See Orton, Diouf, Gueye, Gaye, Thiam & Coles [Acta Cryst. (2023). E78, 1109–1114].

research communications


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The synthesis and structures are reported of two transition-metal complexes involving 2-(2-hy­droxy­phen­yl)benzimidazole with cobalt and manganese, arising from a UK–Africa collaboration.

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The mol­ecular structure of the ternary mononuclear copper(II) title complex shows a slightly distorted square-pyramidal coordination environment of the CuII atom with an [N2O3] coordination set.

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The crystal structure of a second polymorph of CaSiF6·2H2O featuring a layered structure connected by hydrogen bonds is presented.

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In the crystal, mol­ecules are connected by pairs of inter­molecular C—H⋯O hydrogen bonds, forming dimers with [R_{2}^{2}](8) motifs. These dimers form a three-dimensional network through O—H⋯O, O—H⋯S and C—H⋯O hydrogen bonds with each other directly and through solvent mol­ecules.

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In the crystal, the mol­ecules are linked by N—H⋯O and C—H⋯O inter­actions, forming supra­molecular chains parallel to the a axis. These chains pack with C—H⋯π inter­actions between them, forming layers parallel to the (010) plane.

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A bis-chelated mononuclear nickel(II) complex with a di­thio­carbazate ligand bearing a long saturated alkyl chain exhibits a distorted cis square planar coordination of the metal with two ligands conformationally different from the proligand.

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In the title compound, the mol­ecules are connected by C—H⋯O hydrogen bonds in layers parallel to the (020) plane. C—H⋯π and π–π inter­actions further link the mol­ecules into chains extending in the [[\overline{1}]01] direction.

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The synthesis of the title compound as a formic acid salt, rather than the standard hydro­chloride salt that is commercially available, and its spectroscopic and crystallographic characterization are described.

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The title compound {[CdBr2(3-apz)2]}n consists of a Cd2+ cation, bromide anions balancing the charge and bridging 3-amino­pyrazole (3-apz) mol­ecules. The Cd2+ cations are coordinated by two bromide anions and two 3-apz ligands, generating trans-CdN4Br2 octa­hedra, and are linked into chains by pairs of the bridging ligands. In the crystal, the 3-apz ligands and bromide anions of neighboring chains are linked through inter­chain hydrogen bonding into a two-dimensional supra­molecular network.

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The transition-metal orthophosphate, β-Cd3(PO4)2, was synthesized by a solid-state reaction and characterized by single-crystal X-ray diffraction and EDS spectroscopy. It crystallizes in the monoclinic system, space group P21/n.

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In the title compounds, the gold atoms lie on inversion centres and are linearly coordinated by two morpholine ligands. The halide anions lie on twofold axes. Hydrogen bonds and Au⋯halide contacts lead to a layer structure.

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The synthesis, crystal structure and Hirshfeld analysis of the first complex with the (R,S)-fixolide 4-methyl­thio­semicarbazonato ligand is reported. A hydrogen-bonded macrocyclic environment type is observed for the PdII homoleptic complex. In the crystal, the complexes and the ethanol solvate mol­ecules are linked by H⋯S and H⋯O inter­actions, forming mono-periodic hydrogen-bonded ribbons along [011].

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In the crystal structure of the title compound, Fe(NCS)(Cl)(3-cyano­pyridine)4 (3-cyano­pyridine = pyridine-3-carbo­nitrile) the FeII cations are octa­hedrally coordinated by one terminal N-bonding thio­cyanate anion, one chloride anion and four 3-cyano­pyridine coligands that coordinate with the pyridine N atom to the iron centers. Upon heating the 3-cyano­pyridine coligands are emitted in two separate steps, leading to the formation of an inter­mediate compound with the composition Fe(NCS)(Cl)(3-cyano­pyridine)2.

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The title mol­ecule adopts a conformation resembling a two-bladed fan with the octyl chains in fully extended conformations. In the crystal, the mol­ecules are linked by C—H⋯O and C—H⋯N hydrogen bonds and C—H⋯π inter­actions.

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The mol­ecular structure of the title compound comprises an essentially planar pyrimidine ring from which the propynyl group is rotated by 15.31 (4)°. In the crystal, a tri-periodic network is formed by N—H⋯O, N—H⋯N and C—H⋯O hydrogen-bonding and slipped π–π stacking inter­actions, leading to narrow channels extending parallel to the c axis.

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The mol­ecular and crystal structure of a cadmium complex of naphthalene-1,5-di­sulfonate and o-phenyl­enedi­amine was studied and Hirshfeld surfaces and fingerprint plots were generated to investigate the various inter­molecular inter­actions.

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The crystal structure of the title compound features centrosymmetric dimers formed through C—H⋯O weak hydrogen bonds between a C—H group of the electron-deficient benzene ring and the benzo­thia­zolinone carbonyl O atom with an [R_{2}^{2}](10) motif.

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The mol­ecular and crystal structure of a discrete [Ni84-OH)6(μ-4-Rpz)12]2− (R = H; pz = pyrazolato anion) cluster with an unprecedented, perfectly cubic arrangement of its eight Ni centers is reported, along with its lower-symmetry alkyl-functionalized (R = methyl and n-oct­yl) derivatives.

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NbF5 was synthesized in high purity by direct fluorination. IR and Raman spectroscopy confirms the high purity. The crystal structure was redetermined at 100 K with higher precision.

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The seven-membered 1,4-diazepane ring adopts a chair conformation with the 4-chloro­phenyl groups in equatorial orientations. The title compound possesses a docking score of −8.9 kcal mol−1 with the human oestrogen receptor 3ERT protein.

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The crystal structure of neodymium tetra­kis complex based on bis(N,N-tetra­methylene)(tri­chloro­acetyl)phos­phoric acid tri­amide is reported and discussed.

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A structural phase transition occurs for [Bi2O2(OH)](NO3) between 173 K (space group Cmc21; previous single-crystal X-ray data) and 100 K (space group Pna21; current single-crystal X-ray data).

Research communications

Research communications are designed to help authors bring out the science behind their structure determinations. Authors are encouraged to report more than one structure in the same communication and also to include the results of investigations with other techniques. The Research communications format makes Acta E the natural home for structure determinations with interesting science to report.

Emerging Sources Citation Index

Acta E is included in the Emerging Sources Citation Index.

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